28s ribosomal protein mitochondrial, maker-scaffold810_size94089-snap-gene-0.17 (gene) Tigriopus kingsejongensis

Overview


Name	28s ribosomal protein mitochondrial
Unique Name	maker-scaffold810_size94089-snap-gene-0.17
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of 28s ribosomal protein mitochondrial vs. L. salmonis genes
Match: EMLSAG00000012156 (supercontig:LSalAtl2s:LSalAtl2s876:225787:226560:1 gene:EMLSAG00000012156 transcript:EMLSAT00000012156 description:"augustus_masked-LSalAtl2s876-processed-gene-1.3")

HSP 1 Score: 266.544 bits (680), Expect = 2.677e-90
Identity = 132/246 (53.66%), Postives = 167/246 (67.89%), Query Frame = 0

Query:   26 LARCGPFFPRPLQRPLGSASKFSLQIEPSASPVQPAVDPLTQADFFDVQRLFSVRDLFEARVHLGHVHRALNPGMAPFIYGNRFDTSIIDLDQTTVLLRQALNFLAHISAR-----GGIVLFVGRQPHLTHVIERTAMEAGEYAHCRQWMTEYFCAPHAVYGGETRLPDVVIVVHTKDGLKYNEHGAISDAAKVGIPTIGIVDTDCNPNIITFPIPGNDDTPQAVLLYLKLFKEAILLGKKYRESQ 266
            ++R    FPRP      S +  ++Q             P +  D+F V  LFSV DLF ARVH+GHV  +++P M PFIYG RF ++IIDLDQT + LR+ALNFLAHI+ R      GI+LFV RQP   H+ E  A+ +GEYAHCR W  + F  P A Y  E RLPD VI+VHTK+G+KY+EHGA+ DAAK GIPTIGIVD+DCNPNII++PIPGNDD+  ++ LYL LF++AILLGK+ R   
Sbjct:    1 MSRLLRLFPRPYAYRSCSHNAVNIQ-------------PTSIEDYFGVNSLFSVEDLFRARVHMGHVTGSIHPHMKPFIYGTRFGSTIIDLDQTALHLREALNFLAHIANRHVVTVKGIILFVCRQPQFVHMTEVAALSSGEYAHCRTWSHKLFGDPRASYKCEVRLPDAVIMVHTKNGVKYDEHGAVVDAAKAGIPTIGIVDSDCNPNIISYPIPGNDDSITSIRLYLDLFQKAILLGKEKRNEN 233

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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Match: gi|24212389|sp|Q9Y399.1|RT02_HUMAN (RecName: Full=28S ribosomal protein S2, mitochondrial; Short=MRP-S2; Short=S2mt; AltName: Full=Mitochondrial small ribosomal subunit protein uS2m)

HSP 1 Score: 214.157 bits (544), Expect = 1.733e-67
Identity = 107/241 (44.40%), Postives = 155/241 (64.32%), Query Frame = 0

Query:   26 LARCGPFFPRPLQRPLGSASKFSLQIEPSASPVQPAV--DPLTQADFFDVQRLFSVRDLFEARVHLGHVHRALNPGMAPFIYGNRFDTSIIDLDQTTVLLRQALNFLAHISARGGIVLFVGRQPHLTHVIERTAMEAGEYAHCRQWMTEYFCAPHAVYGGETRLPDVVIVVHTKDGLKYNEHGAISDAAKVGIPTIGIVDTDCNPNIITFPIPGNDDTPQAVLLYLKLFKEAILLGKKYRE 264
            L +  P   RP +R LGSA+   ++    ++     +  +PL  +DFF+V+ LFSVR LF+ARVHLGH     +  M P+I+G+R D  IIDL+QT   L+ ALNF AH++ R GI+LF+ R    +++IE  A + GEYAH R +          ++G   RLPD++I +HT + + +  H A+ DAAK+ IPT+GIVDT+CNP +IT+P+PGNDD+P AV LY +LF+ AI   K+ R+
Sbjct:   26 LGKATPRPARPSRRTLGSATALMIRESEDSTDFNDKILNEPLKHSDFFNVKELFSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDHDIIDLEQTATHLQLALNFTAHMAYRKGIILFISRNRQFSYLIENMARDCGEYAHTRYFRGGMLTNARLLFGPTVRLPDLIIFLHTLNNI-FEPHVAVRDAAKMNIPTVGIVDTNCNPCLITYPVPGNDDSPLAVHLYCRLFQTAITRAKEKRQ 265

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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Match: gi|24212377|sp|Q924T2.1|RT02_MOUSE (RecName: Full=28S ribosomal protein S2, mitochondrial; Short=MRP-S2; Short=S2mt)

HSP 1 Score: 211.46 bits (537), Expect = 1.766e-66
Identity = 115/264 (43.56%), Postives = 157/264 (59.47%), Query Frame = 0

Query:   13 PQNAMLASLTSRGLARCGPFFPRPLQRPL-GSASKFSLQIEPSASPVQPAVD--------PLTQADFFDVQRLFSVRDLFEARVHLGHVHRALNPGMAPFIYGNRFDTSIIDLDQTTVLLRQALNFLAHISARGGIVLFVGRQPHLTHVIERTAMEAGEYAHCRQWMTEYFCAPHAVYGGETRLPDVVIVVHTKDGLKYNEHGAISDAAKVGIPTIGIVDTDCNPNIITFPIPGNDDTPQAVLLYLKLFKEAILLGKKYRESQK 267
            P  A+L  L   G+ R   F  + +  P   +  K +    P+ S  Q   D        PL  +DFF+V+ LFSV+ LFEARVHLGH     +  M P+I+GNR    IIDLDQT + L+ ALNF AH++ R GI+LFV R    +H+IE TA   GEYAH R +          ++G   RLPD++I +HT + + +  H A+ DAAK+ IPT+GIVDT+CNP +IT+PIPGNDD+PQA+ L+ KLF+  I   K+ R   +
Sbjct:    3 PAPAVLTRLLCAGVRRWPGFLQKAIPGPAEQNGRKVTGAPVPAVSEPQDGDDFQSRILDTPLQHSDFFNVKELFSVKSLFEARVHLGHKAGCRHRFMEPYIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYRKGIILFVSRNRQFSHLIETTAQACGEYAHTRYFKGGLLTNAQLLFGPSVRLPDLIIFLHTLNNV-FEPHVAVRDAAKMNIPTVGIVDTNCNPCLITYPIPGNDDSPQAIQLFCKLFRTTINRAKEKRRQME 265

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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Match: gi|189031800|sp|P82923.2|RT02_BOVIN (RecName: Full=28S ribosomal protein S2, mitochondrial; Short=MRP-S2; Short=S2mt)

HSP 1 Score: 204.912 bits (520), Expect = 6.225e-64
Identity = 98/202 (48.51%), Postives = 135/202 (66.83%), Query Frame = 0

Query:   63 DPLTQADFFDVQRLFSVRDLFEARVHLGHVHRALNPGMAPFIYGNRFDTSIIDLDQTTVLLRQALNFLAHISARGGIVLFVGRQPHLTHVIERTAMEAGEYAHCRQWMTEYFCAPHAVYGGETRLPDVVIVVHTKDGLKYNEHGAISDAAKVGIPTIGIVDTDCNPNIITFPIPGNDDTPQAVLLYLKLFKEAILLGKKYRE 264
            +PL  +DFF+V+ LFSVR LF ARVHLGH     +  M P+I+G+R    IIDL+QT   L+ ALNF AH++ RGGI+LFV R    +H+IE TA   GEYAH R +          + G   RLPD++I +HT + + +  H A+ DAAK+ IPT+G+VDT+CNP +IT+P+PGNDD+P AV L+ +LF+ A+   K+ R 
Sbjct:   54 EPLKHSDFFNVKELFSVRSLFNARVHLGHKAGCRHRFMEPYIFGSRLGQDIIDLEQTATHLQLALNFTAHVAFRGGIILFVSRARQFSHLIESTARSCGEYAHTRYFKGGLLTNAPLLLGARVRLPDLIIFLHTLNNV-FEPHVAVRDAAKMSIPTVGVVDTNCNPCLITYPVPGNDDSPPAVQLFCQLFQTAVTRAKEKRR 254

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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Match: gi|122980824|sp|Q1D1H9.1|RS2_MYXXD (RecName: Full=30S ribosomal protein S2)

HSP 1 Score: 129.028 bits (323), Expect = 2.548e-34
Identity = 78/228 (34.21%), Postives = 110/228 (48.25%), Query Frame = 0

Query:   77 FSVRDLFEARVHLGHVHRALNPGMAPFIYGNRFDTSIIDLDQTTVLLRQALNFLAHISARGGIVLFVGRQPHLTHVIERTAMEAGEYAHCRQWMTEYFCAPHAVYGGETRL-----------------PDVVIVVHTKDGLKYN---------------------EHGAISDAAKVGIPTIGIVDTDCNPNIITFPIPGNDDTPQAVLLYLKLFKEAILLG-KKYRES 265
             ++R L EA VH GH  +  NP M PFI+G R    IIDL +T V+ R A  F+A I+ARGG VLFVG +     V+   A  AG++    +W+         +  G  RL                  +V  +   ++ L+ N                     EH AI +A ++GIP IG+VDT+C+P+ I F IPGNDD  +++ L+     EA L G  +YR S
Sbjct:    7 ITMRQLLEAGVHFGHQTKRWNPKMKPFIFGARNGIYIIDLQKTVVMARSAFRFVADITARGGSVLFVGTKKQAQDVVREEASRAGQFFVTSRWLGGTLTNFKTIKQGIDRLKTLEKMAEDGTFERLPKKEVAQLEREREKLEKNLGGVKEMSKLPRCVFVIDPKKEHIAIHEAGRLGIPVIGLVDTNCDPDGIDFVIPGNDDAIRSIKLFTSKIAEACLEGAARYRAS 234

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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Match: gi|238692537|sp|B3PYP2.1|RS2_RHIE6 (RecName: Full=30S ribosomal protein S2)

HSP 1 Score: 126.331 bits (316), Expect = 5.578e-34
Identity = 73/231 (31.60%), Postives = 115/231 (49.78%), Query Frame = 0

Query:   77 FSVRDLFEARVHLGHVHRALNPGMAPFIYGNRFDTSIIDLDQTTVLLRQALNFLAHISARGGIVLFVGRQPHLTHVIERTAMEAGEYAHCRQW----MTEYFCAPHA---------VYGGETR-----------------------------LPDVVIVVHTKDGLKYNEHGAISDAAKVGIPTIGIVDTDCNPNIITFPIPGNDDTPQAVLLYLKLFKEAILLGKKYRES 265
            FS+R L EA VH GH     NP M P+I+G+R +  IIDL QT  +L +AL  ++   ARGG VLFVG +   + +I  +A  + +Y    +W    MT +    ++         + GGE +                              PD++ ++ T       E  AI +A ++GIP + I+D++C+P++I +PIPGNDD  +A+ LY +L   A + G   ++S
Sbjct:    6 FSMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARGGRVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLDEILGGEAQGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTN-----KEKIAIDEAKRLGIPVVAIIDSNCDPDLIDYPIPGNDDASRAIALYCELISRAAIDGIARQQS 231

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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Match: gi|7388166|sp|O67809.1|RS2_AQUAE (RecName: Full=30S ribosomal protein S2)

HSP 1 Score: 125.561 bits (314), Expect = 2.175e-33
Identity = 72/233 (30.90%), Postives = 114/233 (48.93%), Query Frame = 0

Query:   76 LFSVRDLFEARVHLGHVHRALNPGMAPFIYGNRFDTSIIDLDQTTVLLRQALNFLAHISARGGIVLFVGRQPHLTHVIERTAMEAGEYAHCRQW----MTEYFCAPHAVYGGET---------------------------------------RLPDVVIVVHTKDGLKYNEHGAISDAAKVGIPTIGIVDTDCNPNIITFPIPGNDDTPQAVLLYLKLFKEAILLGKKYRES 265
            + S+++L EA VH GH     NP MAP+IYG R    IIDL++T V+L  A +F++ + A+GG +LFVG +     +I+  A   G +    +W    +T +     ++   +T                                       +LPDV+ +V T       E  A+S+A K+GIP + I D++C+P +I + IPGNDD  +++ L      +A+L GK+ RES
Sbjct:    3 VVSMKELLEAGVHFGHSKSRWNPKMAPYIYGVRHGIHIIDLNKTIVMLEDAYHFVSDVIAQGGEILFVGTKKQAKDIIKEEAERCGAFYVNERWVGGLLTNFQTVRKSIMKLQTLERMEEDGIFDVLPKKEVRNLRRKMEKLRKLYNGIRDMKKLPDVIWIVDT-----VREKIAVSEARKLGIPIVAIADSNCDPTVIDYTIPGNDDAIKSIKLLTSKIADAVLEGKQRRES 230

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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Match: gi|166225242|sp|A1USD9.1|RS2_BARBK (RecName: Full=30S ribosomal protein S2)

HSP 1 Score: 124.405 bits (311), Expect = 4.392e-33
Identity = 75/225 (33.33%), Postives = 110/225 (48.89%), Query Frame = 0

Query:   77 FSVRDLFEARVHLGHVHRALNPGMAPFIYGNRFDTSIIDLDQTTVLLRQALNFLAHISARGGIVLFVGRQPHLTHVIERTAMEAGEYAHCRQW----MTEYFCAPHAVY---------GGETR-----------------------------LPDVVIVVHTKDGLKYNEHGAISDAAKVGIPTIGIVDTDCNPNIITFPIPGNDDTPQAVLLYLKLFKEAILLG 259
            F++R L EA VH GH  +  NP MA +IYG R +  IIDL QT  LL QAL  ++    RGG VLFVG +   + +I   A  + +Y    +W    +T +    ++++           E R                             +PD++ V+ T       E+ AI +A ++GIP + I+DT+C+P+ I +PIPGNDD  +A+ LY  LF  A L G
Sbjct:    6 FTMRQLLEAGVHFGHQTQRWNPKMARYIYGQRNNVHIIDLSQTVPLLYQALKLVSDTVVRGGRVLFVGTKRQASDIIADAASRSAQYHVNARWLGGMLTNWKTISNSIHRLRKLDKILAAEARGFTKKERLNLERDREKLNRALGGIKDMGSIPDLMFVIDTN-----KENIAIQEAKRLGIPVVAIIDTNCDPDGIDYPIPGNDDASRAISLYCDLFARAALDG 225

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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Match: gi|123738344|sp|Q2K8Y7.1|RS2_RHIEC (RecName: Full=30S ribosomal protein S2 >gi|238058199|sp|B5ZN83.1|RS2_RHILW RecName: Full=30S ribosomal protein S2)

HSP 1 Score: 124.02 bits (310), Expect = 4.554e-33
Identity = 72/231 (31.17%), Postives = 114/231 (49.35%), Query Frame = 0

Query:   77 FSVRDLFEARVHLGHVHRALNPGMAPFIYGNRFDTSIIDLDQTTVLLRQALNFLAHISARGGIVLFVGRQPHLTHVIERTAMEAGEYAHCRQW----MTEYFCAPHA---------VYGGETR-----------------------------LPDVVIVVHTKDGLKYNEHGAISDAAKVGIPTIGIVDTDCNPNIITFPIPGNDDTPQAVLLYLKLFKEAILLGKKYRES 265
            FS+R L EA VH GH     NP M P+I+G+R +  IIDL QT  +L +AL  ++   ARGG VLFVG +   + +I  +A  + +Y    +W    MT +    ++         +  GE +                              PD++ ++ T       E  AI +A ++GIP + I+D++C+P++I +PIPGNDD  +A+ LY +L   A + G   ++S
Sbjct:    6 FSMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARGGRVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLDEILNGEAQGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTN-----KEKIAIDEAKRLGIPVVAIIDSNCDPDLIDYPIPGNDDASRAIALYCELISRAAIDGIARQQS 231

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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Match: gi|38258384|sp|Q8G0D6.1|RS2_BRUSU (RecName: Full=30S ribosomal protein S2 >gi|75505270|sp|Q57CX7.1|RS2_BRUAB RecName: Full=30S ribosomal protein S2 >gi|123768485|sp|Q2YRJ1.1|RS2_BRUA2 RecName: Full=30S ribosomal protein S2 >gi|189044927|sp|A9M5H4.1|RS2_BRUC2 RecName: Full=30S ribosomal protein S2 >gi|189044928|sp|B0CGV9.1|RS2_BRUSI RecName: Full=30S ribosomal protein S2 >gi|238689378|sp|B2S611.1|RS2_BRUA1 RecName: Full=30S ribosomal protein S2 >gi|254764461|sp|C0RJD0.1|RS2_BRUMB RecName: Full=30S ribosomal protein S2)

HSP 1 Score: 123.635 bits (309), Expect = 6.144e-33
Identity = 74/225 (32.89%), Postives = 108/225 (48.00%), Query Frame = 0

Query:   77 FSVRDLFEARVHLGHVHRALNPGMAPFIYGNRFDTSIIDLDQTTVLLRQALNFLAHISARGGIVLFVGRQPHLTHVIERTAMEAGEYAHCRQW----MTEYFCAPHAV---------YGGETR-----------------------------LPDVVIVVHTKDGLKYNEHGAISDAAKVGIPTIGIVDTDCNPNIITFPIPGNDDTPQAVLLYLKLFKEAILLG 259
            FS+R L EA VH GH     NP MAPFIYG R +  I+DL QT  LL  AL  ++   ARGG VLFVG +   + +I   A  + +Y    +W    MT +    +++           GE +                             +PD++ ++ T       E  AI +A ++GIP + ++D++C+P+ I +PIPGNDD  +A+ LY  L   A L G
Sbjct:    6 FSMRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVSDTVARGGRVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLDELLAGEAQGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTN-----KEAIAIQEAKRLGIPVVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDG 225

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BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Match: gi|209573651|sp|A5VQT3.1|RS2_BRUO2 (RecName: Full=30S ribosomal protein S2)

HSP 1 Score: 123.635 bits (309), Expect = 7.088e-33
Identity = 74/225 (32.89%), Postives = 108/225 (48.00%), Query Frame = 0

Query:   77 FSVRDLFEARVHLGHVHRALNPGMAPFIYGNRFDTSIIDLDQTTVLLRQALNFLAHISARGGIVLFVGRQPHLTHVIERTAMEAGEYAHCRQW----MTEYFCAPHAV---------YGGETR-----------------------------LPDVVIVVHTKDGLKYNEHGAISDAAKVGIPTIGIVDTDCNPNIITFPIPGNDDTPQAVLLYLKLFKEAILLG 259
            FS+R L EA VH GH     NP MAPFIYG R +  I+DL QT  LL  AL  ++   ARGG VLFVG +   + +I   A  + +Y    +W    MT +    +++           GE +                             +PD++ ++ T       E  AI +A ++GIP + ++D++C+P+ I +PIPGNDD  +A+ LY  L   A L G
Sbjct:    4 FSMRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVSDTVARGGRVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLDELLAGEAQGFTKKERLNLEREREKLDRTLGGIKDMGSVPDLMFIIDTN-----KEAIAIQEAKRLGIPVVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDG 223

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BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|290462943|gb|ADD24519.1| (28S ribosomal protein S2, mitochondrial [Lepeophtheirus salmonis])

HSP 1 Score: 271.552 bits (693), Expect = 1.647e-88
Identity = 133/241 (55.19%), Postives = 169/241 (70.12%), Query Frame = 0

Query:   26 LARCGPFFPRPLQRPLGSASKFSLQIEPSASPVQPAVDPLTQADFFDVQRLFSVRDLFEARVHLGHVHRALNPGMAPFIYGNRFDTSIIDLDQTTVLLRQALNFLAHISARGGIVLFVGRQPHLTHVIERTAMEAGEYAHCRQWMTEYFCAPHAVYGGETRLPDVVIVVHTKDGLKYNEHGAISDAAKVGIPTIGIVDTDCNPNIITFPIPGNDDTPQAVLLYLKLFKEAILLGKKYRESQ 266
            ++R    FPRP      S S  ++ I+P+           +  D+F V  LFSV DLF ARVH+GHV  +++P M PFIYG RF ++IIDLDQT + LR+ALNFLAHI+ R GI+LFV RQP   H+ E  A+ +GEYAHCR W  + F  P A Y  E RLPD VI+VHTK+G+KY+EHGA+ DAAK GIPTIGIVD+DCNPNII++PIPGNDD+  ++ LYL LF++AILLGK+ R   
Sbjct:    1 MSRLLRLFPRPYA--YRSCSHNAVNIQPT-----------SVEDYFGVNSLFSVEDLFRARVHMGHVTGSIHPHMKPFIYGTRFGSTIIDLDQTALHLREALNFLAHIANRKGIILFVCRQPQFVHMTEVAALSSGEYAHCRTWSHKLFGDPRASYKCEVRLPDAVIMVHTKNGVKYDEHGAVVDAAKAGIPTIGIVDSDCNPNIISYPIPGNDDSIPSIRLYLDLFQKAILLGKEKRNEN 228

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BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|1325300220|ref|XP_023331837.1| (28S ribosomal protein S2, mitochondrial-like [Eurytemora affinis])

HSP 1 Score: 262.692 bits (670), Expect = 9.020e-85
Identity = 126/229 (55.02%), Postives = 166/229 (72.49%), Query Frame = 0

Query:   37 LQRPLGSASKFSLQI--EPSASPVQPAVDPLTQADFFDVQRLFSVRDLFEARVHLGHVHRALNPGMAPFIYGNRFDTSIIDLDQTTVLLRQALNFLAHISARGGIVLFVGRQPHLTHVIERTAMEAGEYAHCRQWMTEYFCAPHAVYGGETRLPDVVIVVHTKDGLKYNEHGAISDAAKVGIPTIGIVDTDCNPNIITFPIPGNDDTPQAVLLYLKLFKEAILLGKKYR 263
            L+ P GS  + S ++  EP    V+   D L   D+F V +LF+V+DLF+ARVHLGH   A++P M  FI+G RF  +IIDLDQTT+LLRQALNF AHI+ R G++LFV RQP L H++++ A+E GEY+  RQW T+ F A    +G E RLPD+VI++H +   +Y EH AI D+AKVGIPT+GIVDTDCNPN+IT+P+PGNDD+  +  LYL LFK+AIL GK+ R
Sbjct:    9 LRLPKGSIRQLSAEVFHEPRRLEVKEE-DSLKHQDYFGVNKLFTVKDLFDARVHLGHKETAMDPRMNQFIFGTRFGQNIIDLDQTTLLLRQALNFTAHIAYRNGLILFVCRQPQLIHMVDKAAIECGEYSFTRQWSTDTFTASTLKFGQEVRLPDLVIILHCRGSEQYAEHRAILDSAKVGIPTVGIVDTDCNPNLITYPVPGNDDSIPSTRLYLDLFKKAILRGKEKR 236

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BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|1228409115|ref|XP_021963822.1| (28S ribosomal protein S2, mitochondrial-like [Folsomia candida] >gi|1215256465|gb|OXA42798.1| hypothetical protein Fcan01_22593 [Folsomia candida])

HSP 1 Score: 256.144 bits (653), Expect = 1.053e-81
Identity = 119/228 (52.19%), Postives = 162/228 (71.05%), Query Frame = 0

Query:   37 LQRPLGSASKFSLQIEPSASPVQPAVDPLTQADFFDVQRLFSVRDLFEARVHLGHVHRALNPGMAPFIYGNRFDTSIIDLDQTTVLLRQALNFLAHISARGGIVLFVGRQPHLTHVIERTAMEAGEYAHCRQWMTEYFCAPHAVYGGETRLPDVVIVVHTKDGLKYNEHGAISDAAKVGIPTIGIVDTDCNPNIITFPIPGNDDTPQAVLLYLKLFKEAILLGKKYRE 264
            L  P+ +A+      +PS   +    + L   D+F V ++F+ RDLF ARVHLGH   +L+P MAPF++G+RFD+ I+DLD+T   LRQALNFLAHI+ R GI++FV R PH+ H++E+TAME GEYAHCR+W T      H  YGG TRLPD +++++T D +    H A+ DAAK+ IPT+G+VD+ C+PN+IT+PIPGNDD+ QA+ LY  LFKEAIL GK  R+
Sbjct:   43 LPHPIVTATPTQAPYQPSLEELMAKDETLQSPDYFQVHKIFTTRDLFRARVHLGHKMGSLHPNMAPFVFGSRFDSVILDLDKTAFHLRQALNFLAHIAYRKGIIVFVTRSPHVIHLVEKTAMEVGEYAHCREWDTHTLTDSHRKYGGITRLPDTILMLNTLDTV-MAPHPAVKDAAKMLIPTVGVVDSSCDPNLITYPIPGNDDSIQALTLYCSLFKEAILRGKNKRK 269

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BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|961374822|gb|ALS04155.1| (mitochondrial 28S ribosomal protein S2 [Acartia pacifica])

HSP 1 Score: 242.662 bits (618), Expect = 1.076e-76
Identity = 109/190 (57.37%), Postives = 145/190 (76.32%), Query Frame = 0

Query:   65 LTQADFFDVQRLFSVRDLFEARVHLGHVHRALNPGMAPFIYGNRFDTSIIDLDQTTVLLRQALNFLAHISARGGIVLFVGRQPHLTHVIERTAMEAGEYAHCRQWMTEYFCAPHAVYGGETRLPDVVIVVHTKDGLKYNEHGAISDAAKVGIPTIGIVDTDCNPNIITFPIPGNDDTPQAVLLYLKLFKE 254
            L   D+F V  LF+V+DLF+ARVHLGH   A++P M  FI+GNRF  SIIDLDQTT+ LRQALNFLAHI  RGGIV+FV RQP L H++++ A++ GE++  R+W +E F +P A +  + RLPD+VIV+HTK   +Y +H  + DAAKV IPTIGIVDTDCNPN++T+P+PGNDD+ ++   YL++FK 
Sbjct:   62 LKYQDYFGVHNLFTVKDLFDARVHLGHKDTAMDPRMKQFIFGNRFGQSIIDLDQTTLHLRQALNFLAHIVYRGGIVMFVCRQPQLIHMVDKAAIDCGEFSFTRRWKSEVFTSPLAAFSQQVRLPDLVIVLHTKTSDQYADHKVVVDAAKVFIPTIGIVDTDCNPNLVTYPVPGNDDSIESANFYLEMFKN 251

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BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|936563448|ref|XP_014218101.1| (28S ribosomal protein S2, mitochondrial [Copidosoma floridanum])

HSP 1 Score: 242.662 bits (618), Expect = 1.983e-76
Identity = 111/205 (54.15%), Postives = 150/205 (73.17%), Query Frame = 0

Query:   62 VDPLTQADFFDVQRLFSVRDLFEARVHLGHVHRALNPGMAPFIYGNRFDTSIIDLDQTTVLLRQALNFLAHISARGGIVLFVGRQPHLTHVIERTAMEAGEYAHCRQWMTEYFCAPHAVYGGETRLPDVVIVVHTKDGLKYNEHGAISDAAKVGIPTIGIVDTDCNPNIITFPIPGNDDTPQAVLLYLKLFKEAILLGKKYRESQ 266
            +DPL   D+F V +LF+V+DLF+ARVH GH    L+  M PF++G+R    I DLDQT  LLRQALNF AHI+   GI+LF+ R P +TH++E+TAME GEY+H R+W    F      +G  TRLPD+ I+++T + +   EH A+S+AAK+ IPT+GIVD++CNPN+IT+P+PGNDDTP A+ LY KLFK+AILLGK+ R  +
Sbjct:   65 IDPLKHPDYFQVHKLFTVKDLFDARVHYGHKVGTLDERMKPFLFGSRLGCLIFDLDQTAELLRQALNFTAHIAYNDGIILFLSRNPQVTHIVEKTAMECGEYSHTRRWKGGTFTNSTKEFGAVTRLPDLCILLNTLNNVML-EHRAVSNAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPCAIELYCKLFKQAILLGKEARAKK 268

[Close]

BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|443696972|gb|ELT97562.1| (hypothetical protein CAPTEDRAFT_21914 [Capitella teleta])

HSP 1 Score: 239.58 bits (610), Expect = 1.255e-75
Identity = 117/247 (47.37%), Postives = 158/247 (63.97%), Query Frame = 0

Query:   17 MLASLTSRGLARCGPFFPRPLQRPLGSASKFSLQIEPSASPVQPAVDPLTQADFFDVQRLFSVRDLFEARVHLGHVHRALNPGMAPFIYGNRFDTSIIDLDQTTVLLRQALNFLAHISARGGIVLFVGRQPHLTHVIERTAMEAGEYAHCRQWMTEYFCAPHAVYGGETRLPDVVIVVHTKDGLKYNEHGAISDAAKVGIPTIGIVDTDCNPNIITFPIPGNDDTPQAVLLYLKLFKEAILLGKKYR 263
            ML  L+S+ L        R LQR     S+   Q        Q +++PL   D+FDV+RL    DLF  RVHLGH     NP M P+I+GNR    I+DLDQT  L+++ALNF+AH++ R GI+LF+ R  H   ++E+ A E GEY+HCRQWMT         +G  TRLPD+ I + T+D + + +H A+ +AAK+ IP++ +VD+ C+P +IT+PIPGNDDTP AV LYLKLFKEAIL GK+ R
Sbjct:    1 MLKRLSSQSL--------RYLQRQCSLQSRLCSQTSSIEESTQTSINPLEHDDYFDVKRLTKKIDLFNNRVHLGHKVGTRNPYMLPYIFGNRLGVDILDLDQTHELMKEALNFIAHVAYRDGIILFISRHLHTIPLVEKAAEECGEYSHCRQWMTGTLTNSSVKFGAVTRLPDLCIFLSTQDTV-FEQHAAVIEAAKMYIPSVAVVDSACDPRLITYPIPGNDDTPCAVELYLKLFKEAILKGKQQR 238

[Close]

BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|1227091883|gb|OXU18295.1| (hypothetical protein TSAR_004024 [Trichomalopsis sarcophagae])

HSP 1 Score: 238.039 bits (606), Expect = 6.326e-75
Identity = 117/225 (52.00%), Postives = 153/225 (68.00%), Query Frame = 0

Query:   46 KFSLQIEPSASPVQPA---VDPLTQADFFDVQRLFSVRDLFEARVHLGHVHRALNPGMAPFIYGNRFDTSIIDLDQTTVLLRQALNFLAHISARGGIVLFVGRQPHLTHVIERTAMEAGEYAHCRQWMTEYFCAPHAVYGGETRLPDVVIVVHTKDGLKYNEHGAISDAAKVGIPTIGIVDTDCNPNIITFPIPGNDDTPQAVLLYLKLFKEAILLGKKYRESQK 267
            K S Q +P+  P +P    + PL   D+F V +LF+V+DLF+ARVH GH    L+  M PFIYG+R    I DLD T  LLR+ALNF AHI+   GI+LF+ R P  TH++E+TA E GE+AH R+W    F      +G  TRLPD+ I + T + +   EH A+S+AAK+ IPT+GIVD++CNPN+IT+P+PGNDDTP AV LY KLFK+AILLGK+ R   K
Sbjct:   30 KLSTQTQPNIQPEEPTKVRLSPLQHPDYFQVHKLFTVKDLFDARVHYGHTEGTLDEHMRPFIYGSRLGHLIFDLDHTAKLLREALNFTAHIAYNQGIILFLCRNPQNTHLVEKTAKECGEFAHTRRWRGGIFTNSTKEFGAVTRLPDLCIFLSTLNTVML-EHRAVSNAAKMLIPTVGIVDSNCNPNLITYPVPGNDDTPCAVELYCKLFKQAILLGKEARVRDK 253

[Close]

BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|970890407|ref|XP_015110464.1| (PREDICTED: 28S ribosomal protein S2, mitochondrial-like isoform X1 [Diachasma alloeum])

HSP 1 Score: 237.269 bits (604), Expect = 1.201e-74
Identity = 118/242 (48.76%), Postives = 162/242 (66.94%), Query Frame = 0

Query:   29 CGPFFPRPLQRPLG---SASKFSLQIEPSASPVQ--PA-VDPLTQADFFDVQRLFSVRDLFEARVHLGHVHRALNPGMAPFIYGNRFDTSIIDLDQTTVLLRQALNFLAHISARGGIVLFVGRQPHLTHVIERTAMEAGEYAHCRQWMTEYFCAPHAVYGGETRLPDVVIVVHTKDGLKYNEHGAISDAAKVGIPTIGIVDTDCNPNIITFPIPGNDDTPQAVLLYLKLFKEAILLGKKYRE 264
            C   F   ++RPLG   S +  S Q EP    ++  PA +DPL   DFF V   F+++DLF+ARVH GH   +L+  M P+IYG+R    IIDLD+T   LR ALNF AHI+ RGGI+LF+ R P +TH++E+TA E  E+AH R W    F     ++   TRLPD+ I ++T++ + + E  A+ D+AK+ IP++GIVDT+CNPN+IT+P+PGNDD+P A+ LY +LFKEAIL GK  RE
Sbjct:   11 CATKFLGHVKRPLGLNFSQTPLSTQAEPRVQKIEEPPAMIDPLKHPDFFGVHEFFTIKDLFDARVHFGHKMGSLDERMKPYIYGSRLGHLIIDLDKTADHLRAALNFTAHIAFRGGIILFISRNPQVTHMVEKTARECSEFAHTRYWKNGTFTNATKIFKAVTRLPDLCIFINTQNDVLF-ESFAVRDSAKMCIPSVGIVDTNCNPNLITYPVPGNDDSPVALALYCRLFKEAILRGKGARE 251

[Close]

BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|970890409|ref|XP_015110465.1| (PREDICTED: 28S ribosomal protein S2, mitochondrial-like isoform X2 [Diachasma alloeum])

HSP 1 Score: 236.498 bits (602), Expect = 2.362e-74
Identity = 116/234 (49.57%), Postives = 160/234 (68.38%), Query Frame = 0

Query:   37 LQRPLG---SASKFSLQIEPSASPVQ--PA-VDPLTQADFFDVQRLFSVRDLFEARVHLGHVHRALNPGMAPFIYGNRFDTSIIDLDQTTVLLRQALNFLAHISARGGIVLFVGRQPHLTHVIERTAMEAGEYAHCRQWMTEYFCAPHAVYGGETRLPDVVIVVHTKDGLKYNEHGAISDAAKVGIPTIGIVDTDCNPNIITFPIPGNDDTPQAVLLYLKLFKEAILLGKKYRE 264
            ++RPLG   S +  S Q EP    ++  PA +DPL   DFF V   F+++DLF+ARVH GH   +L+  M P+IYG+R    IIDLD+T   LR ALNF AHI+ RGGI+LF+ R P +TH++E+TA E  E+AH R W    F     ++   TRLPD+ I ++T++ + + E  A+ D+AK+ IP++GIVDT+CNPN+IT+P+PGNDD+P A+ LY +LFKEAIL GK  RE
Sbjct:   17 VKRPLGLNFSQTPLSTQAEPRVQKIEEPPAMIDPLKHPDFFGVHEFFTIKDLFDARVHFGHKMGSLDERMKPYIYGSRLGHLIIDLDKTADHLRAALNFTAHIAFRGGIILFISRNPQVTHMVEKTARECSEFAHTRYWKNGTFTNATKIFKAVTRLPDLCIFINTQNDVLF-ESFAVRDSAKMCIPSVGIVDTNCNPNLITYPVPGNDDSPVALALYCRLFKEAILRGKGARE 249

[Close]

BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|926620161|ref|XP_013775361.1| (28S ribosomal protein S2, mitochondrial-like [Limulus polyphemus])

HSP 1 Score: 236.113 bits (601), Expect = 6.638e-74
Identity = 122/265 (46.04%), Postives = 166/265 (62.64%), Query Frame = 0

Query:    6 LRLALARPQNAMLASLTSRGLARCGPFFPRPLQRPLGSASKFSLQ-IEPSASPVQPAV-DPLTQADFFDVQRLFSVRDLFEARVHLGHVHRALNPGMAPFIYGNRFDTSIIDLDQTTVLLRQALNFLAHISARGGIVLFVGRQPHLTHVIERTAMEAGEYAHCRQWMTEYFCAPHAVYGGETRLPDVVIVVHTKDGLKYNEHGAISDAAKVGIPTIGIVDTDCNPNIITFPIPGNDDTPQAVLLYLKLFKEAILLGKKYRESQKK 268
            +R    +    +L S T    +        PL R L + ++     +E      QP V DPL   DFF+V +LF+V+DLF+ARVHLGH    L+  M PFI+G+R    +IDLDQT   LRQALNF+AHI+   GI+LFV R    +  +E+TA E GE+AH R W    F   +  +G  TRLPD+VI ++T + + +  H A+ D+AK+ IPT+GIVDT+CNPN+IT+P+PGNDDTP AV LY KLFK+AIL GK  R+  ++
Sbjct:    5 VRSVCIKCTEQLLKSTTVSNFSYQWTSLFSPLHRRLSAETQLITDPVEKHEGVQQPVVIDPLKHPDFFEVHKLFTVKDLFDARVHLGHKEGTLDENMKPFIFGSRLGNLVIDLDQTAFYLRQALNFIAHIAYCDGIILFVTRHRQTSQFVEKTAKECGEFAHTRYWRGGIFTNANMQFGTITRLPDLVIFLNTLNNV-FEPHVAVRDSAKMLIPTVGIVDTNCNPNLITYPVPGNDDTPCAVELYCKLFKQAILKGKSKRKVMEQ 268

The following BLAST results are available for this feature:

BLAST of 28s ribosomal protein mitochondrial vs. L. salmonis genes
BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
BLAST of 28s ribosomal protein mitochondrial vs. nr

BLAST of 28s ribosomal protein mitochondrial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAG00000012156	2.677e-90	53.66	supercontig:LSalAtl2s:LSalAtl2s876:225787:226560:1...	[more]

BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|24212389\|sp\|Q9Y399.1\|RT02_HUMAN	1.733e-67	44.40	RecName: Full=28S ribosomal protein S2, mitochondr...	[more]
gi\|24212377\|sp\|Q924T2.1\|RT02_MOUSE	1.766e-66	43.56	RecName: Full=28S ribosomal protein S2, mitochondr...	[more]
gi\|189031800\|sp\|P82923.2\|RT02_BOVIN	6.225e-64	48.51	RecName: Full=28S ribosomal protein S2, mitochondr...	[more]
gi\|122980824\|sp\|Q1D1H9.1\|RS2_MYXXD	2.548e-34	34.21	RecName: Full=30S ribosomal protein S2	[more]
gi\|238692537\|sp\|B3PYP2.1\|RS2_RHIE6	5.578e-34	31.60	RecName: Full=30S ribosomal protein S2	[more]
gi\|7388166\|sp\|O67809.1\|RS2_AQUAE	2.175e-33	30.90	RecName: Full=30S ribosomal protein S2	[more]
gi\|166225242\|sp\|A1USD9.1\|RS2_BARBK	4.392e-33	33.33	RecName: Full=30S ribosomal protein S2	[more]
gi\|123738344\|sp\|Q2K8Y7.1\|RS2_RHIEC	4.554e-33	31.17	RecName: Full=30S ribosomal protein S2 >gi\|2380581...	[more]
gi\|38258384\|sp\|Q8G0D6.1\|RS2_BRUSU	6.144e-33	32.89	RecName: Full=30S ribosomal protein S2 >gi\|7550527...	[more]
gi\|209573651\|sp\|A5VQT3.1\|RS2_BRUO2	7.088e-33	32.89	RecName: Full=30S ribosomal protein S2	[more]

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BLAST of 28s ribosomal protein mitochondrial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|290462943\|gb\|ADD24519.1\|	1.647e-88	55.19	28S ribosomal protein S2, mitochondrial [Lepeophth...	[more]
gi\|1325300220\|ref\|XP_023331837.1\|	9.020e-85	55.02	28S ribosomal protein S2, mitochondrial-like [Eury...	[more]
gi\|1228409115\|ref\|XP_021963822.1\|	1.053e-81	52.19	28S ribosomal protein S2, mitochondrial-like [Fols...	[more]
gi\|961374822\|gb\|ALS04155.1\|	1.076e-76	57.37	mitochondrial 28S ribosomal protein S2 [Acartia pa...	[more]
gi\|936563448\|ref\|XP_014218101.1\|	1.983e-76	54.15	28S ribosomal protein S2, mitochondrial [Copidosom...	[more]
gi\|443696972\|gb\|ELT97562.1\|	1.255e-75	47.37	hypothetical protein CAPTEDRAFT_21914 [Capitella t...	[more]
gi\|1227091883\|gb\|OXU18295.1\|	6.326e-75	52.00	hypothetical protein TSAR_004024 [Trichomalopsis s...	[more]
gi\|970890407\|ref\|XP_015110464.1\|	1.201e-74	48.76	PREDICTED: 28S ribosomal protein S2, mitochondrial...	[more]
gi\|970890409\|ref\|XP_015110465.1\|	2.362e-74	49.57	PREDICTED: 28S ribosomal protein S2, mitochondrial...	[more]
gi\|926620161\|ref\|XP_013775361.1\|	6.638e-74	46.04	28S ribosomal protein S2, mitochondrial-like [Limu...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold810_size94089	supercontig	scaffold810_size94089:2216..3164 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	C:intracellular

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold810_size94089-snap-gene-0.17-mRNA-1	maker-scaffold810_size94089-snap-gene-0.17-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold810_size94089:2216..3164-

gene from alignment at scaffold810_size94089:2216..3164-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold810_size94089-snap-gene-0.17 ID=maker-scaffold810_size94089-snap-gene-0.17|Name=28s ribosomal protein mitochondrial|organism=Tigriopus kingsejongensis|type=gene|length=949bp|location=Sequence derived from alignment at scaffold810_size94089:2216..3164- (Tigriopus kingsejongensis)
ATCGGCCACCCTGAGCTGGAATTCCACTTCATCACAACAACATGTTTCCC
TATTAAATCGCGAGTGTTCCAGCTTCCAGTTTGTGTCGGTTCCAGCTCAG
GTTAGCCTTAGCTCGCCCCCAGAACGCCATGCTGGCCAGTTTGACGTCTC
GCGGCCTCGCCCGCTGTGGCCCGTTTTTTCCCCGCCCGCTTCAGCGGCCC
TTGGGCTCGGCCTCCAAGTTCTCCCTCCAGATCGAGCCCTCGGCGAGTCC
GGTCCAGCCCGCCGTCGACCCGTTGACTCAGGCCGACTTCTTCGACGTGC
AGCGGCTTTTCAGCGTCCGCGATCTCTTTGAAGCGCGCGTGCACTTGGGC
CATGTCCATCGCGCCCTCAACCCGGGCATGGCTCCCTTCATCTACGGAAA
TCGCTTCGACACGTCCATCATCGACCTCGACCAGACCACGGTGCTACTCC
GACAGGTATGTCCGGCCCTCTTCACCCGCCAGGATCGCTCATTGACGGGC
TTTGGCTCCACTTCTAGGCACTCAACTTCCTGGCTCACATCAGCGCCCGC
GGCGGGATCGTCCTCTTCGTGGGTCGCCAGCCTCATCTGACCCACGTGAT
CGAGCGCACGGCCATGGAGGCCGGCGAGTACGCCCACTGCCGCCAGTGGA
TGACCGAGTACTTTTGCGCGCCCCACGCCGTGTACGGGGGTGAGACCCGC
TTGCCTGACGTGGTGATTGTGGTGCACACCAAAGACGGGCTCAAATACAA
CGAACACGGGGCGATTTCGGATGCAGCCAAAGTGGGCATCCCCACGATTG
GCATCGTGGACACGGACTGCAATCCCAATATCATTACCTTTCCGATCCCC
GGCAATGATGACACGCCGCAGGCGGTTCTTCTCTATTTGAAGCTATTCAA
GGAGGCCATTCTCTTAGGCAAAAAGTATCGCGAGAGTCAGAAAAAATAA

Synonyms

The feature '28s ribosomal protein mitochondrial' has the following synonyms


Synonym
Tk05705

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