predicted protein, maker-scaffold82_size396747-snap-gene-1.22 (gene) Tigriopus kingsejongensis

Overview
Namepredicted protein
Unique Namemaker-scaffold82_size396747-snap-gene-1.22
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of predicted protein vs. L. salmonis genes
Match: EMLSAG00000013029 (supercontig:LSalAtl2s:LSalAtl2s999:61196:94625:-1 gene:EMLSAG00000013029 transcript:EMLSAT00000013029 description:"maker-LSalAtl2s999-snap-gene-1.11")

HSP 1 Score: 80.8777 bits (198), Expect = 5.704e-20
Identity = 40/70 (57.14%), Postives = 52/70 (74.29%), Query Frame = 0 
Query:   25 GMSKERNLLVQKDAGSYGLTLSGDKPVFVQSLRPGGAADRAGIRVNDVILRVNGRRVLESSHTEVVNIIQ 94
            G S+ +  +V KD   YGLTL G +PVFVQ+++  GAADRAGI+  D+IL+VNG  V ESSH EVV+II+
Sbjct:   18 GESEGQTFVVHKDTNGYGLTLFGYRPVFVQTVKAKGAADRAGIKERDIILQVNGINVTESSHDEVVDIIK 87
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BLAST of predicted protein vs. L. salmonis genes
Match: EMLSAG00000007048 (supercontig:LSalAtl2s:LSalAtl2s3:1220121:1234349:-1 gene:EMLSAG00000007048 transcript:EMLSAT00000007048 description:"maker-LSalAtl2s3-snap-gene-14.15")

HSP 1 Score: 58.9214 bits (141), Expect = 5.080e-12
Identity = 26/71 (36.62%), Postives = 40/71 (56.34%), Query Frame = 0 
Query:   24 RGMSKERNLLVQKDAGSYGLTLSGDKPVFVQSLRPGGAADRAGIRVNDVILRVNGRRVLESSHTEVVNIIQ 94
            R     + + VQ+  G +G  + G +PV + ++ P   A R+G+ V D+IL +NG  VL+  HTEVV   Q
Sbjct:  713 RSFECNKTVTVQRIRGEFGFRIHGSRPVVISAIEPDTPAQRSGLEVGDIILSINGVNVLDLPHTEVVRTAQ 783
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BLAST of predicted protein vs. L. salmonis genes
Match: EMLSAG00000002683 (supercontig:LSalAtl2s:LSalAtl2s154:655936:690101:1 gene:EMLSAG00000002683 transcript:EMLSAT00000002683 description:"augustus_masked-LSalAtl2s154-processed-gene-7.0")

HSP 1 Score: 46.595 bits (109), Expect = 1.112e-7
Identity = 20/50 (40.00%), Postives = 34/50 (68.00%), Query Frame = 0 
Query:   44 TLSGDKPVFVQSLRPGGAADRAGIRVNDVILRVNGRRVLESSHTEVVNII 93
            T+  +   F++ + P G ADR+G+ ++DV+L VNG  V+E +H +VV+ I
Sbjct:  407 TVKKENTKFIKEITPDGPADRSGLLLDDVVLAVNGEDVVEETHKDVVDRI 456
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BLAST of predicted protein vs. SwissProt
Match: gi|34395525|sp|Q9NZN5.1|ARHGC_HUMAN (RecName: Full=Rho guanine nucleotide exchange factor 12; AltName: Full=Leukemia-associated RhoGEF)

HSP 1 Score: 74.3294 bits (181), Expect = 6.590e-16
Identity = 34/66 (51.52%), Postives = 49/66 (74.24%), Query Frame = 0 
Query:   29 ERNLLVQKDAGSYGLTLSGDKPVFVQSLRPGGAADRAGIRVNDVILRVNGRRVLESSHTEVVNIIQ 94
            +R +++QKD   +GLT+SGD PVFVQS++  GAA RAG++  D I++VNG  V  S+H EVV +I+
Sbjct:   70 QRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGTLVTHSNHLEVVKLIK 135
[Close]
BLAST of predicted protein vs. SwissProt
Match: gi|341940240|sp|Q8R4H2.2|ARHGC_MOUSE (RecName: Full=Rho guanine nucleotide exchange factor 12; AltName: Full=Leukemia-associated RhoGEF)

HSP 1 Score: 73.9442 bits (180), Expect = 8.007e-16
Identity = 34/66 (51.52%), Postives = 49/66 (74.24%), Query Frame = 0 
Query:   29 ERNLLVQKDAGSYGLTLSGDKPVFVQSLRPGGAADRAGIRVNDVILRVNGRRVLESSHTEVVNIIQ 94
            +R +++QKD   +GLT+SGD PVFVQS++  GAA RAG++  D I++VNG  V  S+H EVV +I+
Sbjct:   70 QRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGTLVTHSNHLEVVKLIR 135
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BLAST of predicted protein vs. SwissProt
Match: gi|34395514|sp|Q9ES67.1|ARHGB_RAT (RecName: Full=Rho guanine nucleotide exchange factor 11; AltName: Full=RhoGEF glutamate transport modulator GTRAP48)

HSP 1 Score: 72.4034 bits (176), Expect = 3.253e-15
Identity = 34/66 (51.52%), Postives = 49/66 (74.24%), Query Frame = 0 
Query:   29 ERNLLVQKDAGSYGLTLSGDKPVFVQSLRPGGAADRAGIRVNDVILRVNGRRVLESSHTEVVNIIQ 94
            +R +++QKD   +G T+SGD+ V VQS+RPGGAA +AG++  D I++VNG  V  SSH EVV +I+
Sbjct:   62 QRCVIIQKDQHGFGFTVSGDRIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIK 127
[Close]
BLAST of predicted protein vs. SwissProt
Match: gi|34395516|sp|O15085.1|ARHGB_HUMAN (RecName: Full=Rho guanine nucleotide exchange factor 11; AltName: Full=PDZ-RhoGEF)

HSP 1 Score: 72.4034 bits (176), Expect = 3.284e-15
Identity = 34/66 (51.52%), Postives = 49/66 (74.24%), Query Frame = 0 
Query:   29 ERNLLVQKDAGSYGLTLSGDKPVFVQSLRPGGAADRAGIRVNDVILRVNGRRVLESSHTEVVNIIQ 94
            +R +++QKD   +G T+SGD+ V VQS+RPGGAA +AG++  D I++VNG  V  SSH EVV +I+
Sbjct:   45 QRCVIIQKDQHGFGFTVSGDRIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIK 110
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BLAST of predicted protein vs. SwissProt
Match: gi|73621372|sp|Q5T2W1.2|NHRF3_HUMAN (RecName: Full=Na(+)/H(+) exchange regulatory cofactor NHE-RF3; Short=NHERF-3; AltName: Full=CFTR-associated protein of 70 kDa; AltName: Full=Na(+)/H(+) exchanger regulatory factor 3; AltName: Full=Na/Pi cotransporter C-terminal-associated protein 1; Short=NaPi-Cap1; AltName: Full=PDZ domain-containing protein 1; AltName: Full=Sodium-hydrogen exchanger regulatory factor 3)

HSP 1 Score: 56.225 bits (134), Expect = 1.208e-9
Identity = 34/100 (34.00%), Postives = 55/100 (55.00%), Query Frame = 0 
Query:    1 LREFGWLGAEHA---GIVSPMDNVSLRGMSKERNLLVQKDAGSYGL---TLSGDKPVFVQSLRPGGAADRAGIRVNDVILRVNGRRVLESSHTEVVNIIQ 94
            L+E G    E      I+SP+ N  ++  ++ R   + K+ GSYG    T+ G K V++  + P G A RAG+  +D ++ VNG  V ++SH EVV  ++
Sbjct:  102 LKELGQSQKEQGLSDNILSPVMNGGVQTWTQPRLCYLVKEGGSYGFSLKTVQGKKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVK 201
[Close]
BLAST of predicted protein vs. SwissProt
Match: gi|82206423|sp|Q6ZM86.1|GRD2I_DANRE (RecName: Full=Delphilin; AltName: Full=Glutamate receptor, ionotropic, delta 2-interacting protein 1)

HSP 1 Score: 52.7582 bits (125), Expect = 2.129e-8
Identity = 24/66 (36.36%), Postives = 40/66 (60.61%), Query Frame = 0 
Query:   29 ERNLLVQKDAGSYGLTLSGDKPVFVQSLRPGGAADRAGIRVNDVILRVNGRRVLESSHTEVVNIIQ 94
            +R + V +   S+G TL G  PV++ S+ PG  A+  G++  D IL +NG  +   SH +VV+++Q
Sbjct:   93 QRTIRVYRGKKSFGFTLRGHAPVWIDSVMPGSPAEACGLKTGDRILFLNGLDMRNCSHEKVVSMLQ 158
[Close]
BLAST of predicted protein vs. SwissProt
Match: gi|187471169|sp|A4D2P6.2|GRD2I_HUMAN (RecName: Full=Delphilin; AltName: Full=Glutamate receptor, ionotropic, delta 2-interacting protein 1)

HSP 1 Score: 52.373 bits (124), Expect = 3.425e-8
Identity = 26/65 (40.00%), Postives = 40/65 (61.54%), Query Frame = 0 
Query:   30 RNLLVQKDAGSYGLTLSGDKPVFVQSLRPGGAADRAGIRVNDVILRVNGRRVLESSHTEVVNIIQ 94
            R + V K   S+G TL G  PV+++S+ PG  AD A ++  D IL +NG  +   SH +VV+++Q
Sbjct:  278 RTVRVYKGNKSFGFTLRGHGPVWIESVLPGSPADNAALKSGDRILFLNGLDMRNCSHDKVVSMLQ 342
[Close]
BLAST of predicted protein vs. SwissProt
Match: gi|341941974|sp|Q61085.2|RHPN1_MOUSE (RecName: Full=Rhophilin-1; AltName: Full=GTP-Rho-binding protein 1)

HSP 1 Score: 51.9878 bits (123), Expect = 3.692e-8
Identity = 24/52 (46.15%), Postives = 33/52 (63.46%), Query Frame = 0 
Query:   39 GSYGLTLSGDKPVFVQSLRPGGAADRAGIRVNDVILRVNGRRVLESSHTEVV 90
            GS+G TL GD PV + ++ PGG A+ AG++  D I+ VNG+      H EVV
Sbjct:  508 GSFGFTLRGDSPVLIAAVVPGGQAESAGLKEGDYIVSVNGQPCKWWKHLEVV 559
[Close]
BLAST of predicted protein vs. SwissProt
Match: gi|73621374|sp|Q5RCF7.1|NHRF3_PONAB (RecName: Full=Na(+)/H(+) exchange regulatory cofactor NHE-RF3; Short=NHERF-3; AltName: Full=Na(+)/H(+) exchanger regulatory factor 3; AltName: Full=PDZ domain-containing protein 1; AltName: Full=Sodium-hydrogen exchanger regulatory factor 3)

HSP 1 Score: 51.9878 bits (123), Expect = 4.455e-8
Identity = 31/100 (31.00%), Postives = 54/100 (54.00%), Query Frame = 0 
Query:    1 LREFGWLGAEHA---GIVSPMDNVSLRGMSKERNLLVQKDAGSYGL---TLSGDKPVFVQSLRPGGAADRAGIRVNDVILRVNGRRVLESSHTEVVNIIQ 94
            L+E G    E       +SP+ N  ++  ++ R   + K+ GSYG    T+ G K V++  + P G A +AG+  +D ++ VNG  V ++SH +VV  ++
Sbjct:  102 LKELGQRQKEQGLSDNTLSPVMNGGVQTWTQPRLCYLVKEGGSYGFSLKTVQGKKGVYMTDITPQGVAMKAGVLADDHLIEVNGENVEDASHEQVVEKVK 201
[Close]
BLAST of predicted protein vs. SwissProt
Match: gi|123792660|sp|Q0QWG9.1|GRD2I_MOUSE (RecName: Full=Delphilin; AltName: Full=Glutamate receptor, ionotropic, delta 2-interacting protein 1)

HSP 1 Score: 48.9062 bits (115), Expect = 5.852e-7
Identity = 24/61 (39.34%), Postives = 38/61 (62.30%), Query Frame = 0 
Query:   34 VQKDAGSYGLTLSGDKPVFVQSLRPGGAADRAGIRVNDVILRVNGRRVLESSHTEVVNIIQ 94
            V K   S+G TL G  PV+++S+ PG  A+ A ++  D IL +NG  +   SH +VV+++Q
Sbjct:  271 VYKGNKSFGFTLRGHGPVWIESVLPGSPAENASLKSGDRILFLNGLDMRNCSHDKVVSMLQ 331
[Close]
BLAST of predicted protein vs. nr
Match: gi|957819308|ref|XP_014674125.1| (PREDICTED: rho guanine nucleotide exchange factor 11-like [Priapulus caudatus])

HSP 1 Score: 78.1814 bits (191), Expect = 8.210e-15
Identity = 34/66 (51.52%), Postives = 51/66 (77.27%), Query Frame = 0 
Query:   29 ERNLLVQKDAGSYGLTLSGDKPVFVQSLRPGGAADRAGIRVNDVILRVNGRRVLESSHTEVVNIIQ 94
            +R +++QKD   YGLT+SGD PVFVQS++ GGAA +AG+++ D I++VNG  V  S+H EVV +++
Sbjct:   14 QRCVIIQKDEKGYGLTVSGDNPVFVQSVKEGGAAAKAGVQIGDRIIKVNGTLVTSSNHLEVVRLVK 79
[Close]
BLAST of predicted protein vs. nr
Match: gi|443731510|gb|ELU16615.1| (hypothetical protein CAPTEDRAFT_87566, partial [Capitella teleta])

HSP 1 Score: 71.633 bits (174), Expect = 1.103e-14
Identity = 33/66 (50.00%), Postives = 50/66 (75.76%), Query Frame = 0 
Query:   29 ERNLLVQKDAGSYGLTLSGDKPVFVQSLRPGGAADRAGIRVNDVILRVNGRRVLESSHTEVVNIIQ 94
            +R +++Q+D   YGLT+SGD PVFV+S++  GAA RAG++  D I++VNG  V +S+H  VVN+I+
Sbjct:    3 QRCVIIQRDEKGYGLTVSGDNPVFVRSVKENGAAARAGVQEADRIIKVNGTLVTKSNHIRVVNLIK 68
[Close]
BLAST of predicted protein vs. nr
Match: gi|1032743754|ref|XP_016838354.1| (PREDICTED: rho guanine nucleotide exchange factor 12 isoform X3 [Nasonia vitripennis])

HSP 1 Score: 77.7962 bits (190), Expect = 1.252e-14
Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = 0 
Query:   31 NLLVQKDAGSYGLTLSGDKPVFVQSLRPGGAADRAGIRVNDVILRVNGRRVLESSHTEVVNIIQ 94
             L+V KD   YG+ +SGDKPV+VQS++ GGAA+RAG+   D I++VNG  V +S+HTEVV +I+
Sbjct:   24 TLVVYKDDAGYGMKVSGDKPVYVQSVKEGGAAERAGLHAGDEIIKVNGLNVTQSTHTEVVKLIK 87
[Close]
BLAST of predicted protein vs. nr
Match: gi|1032743752|ref|XP_016838353.1| (PREDICTED: rho guanine nucleotide exchange factor 12 isoform X2 [Nasonia vitripennis])

HSP 1 Score: 77.7962 bits (190), Expect = 1.252e-14
Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = 0 
Query:   31 NLLVQKDAGSYGLTLSGDKPVFVQSLRPGGAADRAGIRVNDVILRVNGRRVLESSHTEVVNIIQ 94
             L+V KD   YG+ +SGDKPV+VQS++ GGAA+RAG+   D I++VNG  V +S+HTEVV +I+
Sbjct:   24 TLVVYKDDAGYGMKVSGDKPVYVQSVKEGGAAERAGLHAGDEIIKVNGLNVTQSTHTEVVKLIK 87
[Close]
BLAST of predicted protein vs. nr
Match: gi|759199078|ref|XP_011385857.1| (rho guanine nucleotide exchange factor 11-like [Pteropus vampyrus])

HSP 1 Score: 73.1738 bits (178), Expect = 1.267e-14
Identity = 34/66 (51.52%), Postives = 49/66 (74.24%), Query Frame = 0 
Query:   29 ERNLLVQKDAGSYGLTLSGDKPVFVQSLRPGGAADRAGIRVNDVILRVNGRRVLESSHTEVVNIIQ 94
            +R +++QKD   +G T+SGD+ V VQS+RPGGAA +AG++  D I++VNG  V  SSH EVV +I+
Sbjct:   45 QRCVIIQKDQHGFGFTVSGDRVVLVQSVRPGGAAVKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIK 110
The following BLAST results are available for this feature:
BLAST of predicted protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 3
Match NameE-valueIdentityDescription
EMLSAG000000130295.704e-2057.14supercontig:LSalAtl2s:LSalAtl2s999:61196:94625:-1 ... [more]
EMLSAG000000070485.080e-1236.62supercontig:LSalAtl2s:LSalAtl2s3:1220121:1234349:-... [more]
EMLSAG000000026831.112e-740.00supercontig:LSalAtl2s:LSalAtl2s154:655936:690101:1... [more]
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BLAST of predicted protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
gi|34395525|sp|Q9NZN5.1|ARHGC_HUMAN6.590e-1651.52RecName: Full=Rho guanine nucleotide exchange fact... [more]
gi|341940240|sp|Q8R4H2.2|ARHGC_MOUSE8.007e-1651.52RecName: Full=Rho guanine nucleotide exchange fact... [more]
gi|34395514|sp|Q9ES67.1|ARHGB_RAT3.253e-1551.52RecName: Full=Rho guanine nucleotide exchange fact... [more]
gi|34395516|sp|O15085.1|ARHGB_HUMAN3.284e-1551.52RecName: Full=Rho guanine nucleotide exchange fact... [more]
gi|73621372|sp|Q5T2W1.2|NHRF3_HUMAN1.208e-934.00RecName: Full=Na(+)/H(+) exchange regulatory cofac... [more]
gi|82206423|sp|Q6ZM86.1|GRD2I_DANRE2.129e-836.36RecName: Full=Delphilin; AltName: Full=Glutamate r... [more]
gi|187471169|sp|A4D2P6.2|GRD2I_HUMAN3.425e-840.00RecName: Full=Delphilin; AltName: Full=Glutamate r... [more]
gi|341941974|sp|Q61085.2|RHPN1_MOUSE3.692e-846.15RecName: Full=Rhophilin-1; AltName: Full=GTP-Rho-b... [more]
gi|73621374|sp|Q5RCF7.1|NHRF3_PONAB4.455e-831.00RecName: Full=Na(+)/H(+) exchange regulatory cofac... [more]
gi|123792660|sp|Q0QWG9.1|GRD2I_MOUSE5.852e-739.34RecName: Full=Delphilin; AltName: Full=Glutamate r... [more]

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BLAST of predicted protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|957819308|ref|XP_014674125.1|8.210e-1551.52PREDICTED: rho guanine nucleotide exchange factor ... [more]
gi|443731510|gb|ELU16615.1|1.103e-1450.00hypothetical protein CAPTEDRAFT_87566, partial [Ca... [more]
gi|1032743754|ref|XP_016838354.1|1.252e-1454.69PREDICTED: rho guanine nucleotide exchange factor ... [more]
gi|1032743752|ref|XP_016838353.1|1.252e-1454.69PREDICTED: rho guanine nucleotide exchange factor ... [more]
gi|759199078|ref|XP_011385857.1|1.267e-1451.52rho guanine nucleotide exchange factor 11-like [Pt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold82_size396747supercontigscaffold82_size396747:129411..130543 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold82_size396747-snap-gene-1.22-mRNA-1maker-scaffold82_size396747-snap-gene-1.22-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold82_size396747:129411..130543-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold82_size396747-snap-gene-1.22 ID=maker-scaffold82_size396747-snap-gene-1.22|Name=predicted protein|organism=Tigriopus kingsejongensis|type=gene|length=1133bp|location=Sequence derived from alignment at scaffold82_size396747:129411..130543- (Tigriopus kingsejongensis)
CAAAGTGATCCTTGTGACTCAGATAAAACCCAGTGCAATTAAAAGTTTGC
CTCCAAATTCGCATTTCGGGCCCCAAGACCAGACGCTGAGTGATTGAGGC
CAAACCACTGAGAGAGTTTGGCTGGCTCGGAGCCGAGCATGCAGGCATTG
TGTCCCCAATGGACAACGTCAGCTTGAGAGGCATGTCCAAAGAGAGGTAA
GGCAGGGCTTCATTTACTAAGTCAACACTACTAGTTCTTCCAGCCTTGGG
ATCCACGGAATTGCTCCATGTACTCAGACCCTCGGTGTTCCATTCAAAAC
TCGAATCCATTGCGATTGCCTCTCAATAACACAGGTGCTTTCTCCCACAG
CAACAAGTGGCCAAATTCGGCGTCAAGATCGAATTTCCGACGAACAGTAA
AAAAGCATGCATTATTGAGGCCCATACATGAGGGCGAGGTAATTTTGCCA
CTCAAATTGCAAAGGAATCGAGGCGGCTCAATAGCATTAGATGAGAGTAT
ATTTAGCATGCATGCATTTTAATCAGGAGGTGTTTGAGAGCTTCCGGGGA
AACTTTGTACAGAGTGCAGACTTGATCGCTGGGTGGCGAACATAAATAGT
CGGGAATAGGAAGCGATAAGGCATGTCAGGTAATGTCTGACTCTTATCTC
TCACTCGGGGTTATTCGGTGAGGATCTCTCTGAAAGTCAACATGCGCTAT
TGGCTTATGCGAGGTTCATGCCTTATATCAAGTGGAATGACTTGTGGTTG
GCCGAATCGGTTGAAAGATAATACATGTTTCAACTGGGCCTGATTGATCA
GGGATGTTTGCGAATATCAAGAACCACCATACTTTCACTTTCTGTCCCCT
CTAGCTGGTTTGACGTCATGAACCAGAACCGAGAGGGAAATTGATTCTCT
CGGTGAAGCGACACCATAAAGTCATTGGTATCTATTTCAGGAATCTCTTG
GTGCAAAAAGACGCCGGAAGCTATGGACTCACCCTGTCCGGCGACAAACC
CGTGTTCGTTCAGAGTTTGCGGCCGGGCGGAGCCGCAGATCGGGCCGGTA
TCAGGGTCAATGACGTCATCCTTCGCGTCAACGGCCGAAGGGTACTCGAG
TCTTCGCACACCGAAGTGGTTAATATCATCCAA
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Synonyms
The feature 'predicted protein' has the following synonyms
Synonym
Tk06825
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