zinc finger protein 184-like, maker-scaffold84_size396325-snap-gene-2.36 (gene) Tigriopus kingsejongensis

Overview
Namezinc finger protein 184-like
Unique Namemaker-scaffold84_size396325-snap-gene-2.36
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of zinc finger protein 184-like vs. L. salmonis genes
Match: EMLSAG00000011029 (supercontig:LSalAtl2s:LSalAtl2s743:217313:218503:-1 gene:EMLSAG00000011029 transcript:EMLSAT00000011029 description:"maker-LSalAtl2s743-augustus-gene-2.16")

HSP 1 Score: 85.5001 bits (210), Expect = 2.237e-18
Identity = 87/364 (23.90%), Postives = 146/364 (40.11%), Query Frame = 0 
Query:  103 ITFIHKPSGAFYMTCPVCQALCTRSTLSPHLQRAHEVSYIACSGDECAG---IRCKTAEYAVHLNKVHATAFCTLCEVHFDIN--RGYASHMVRTDLHARSDTILLPKSIRSKLKLQAPKPLSSPAPEMHTEFVSLNFRSRPRPAAILMNGDIILIDGIKYLL-KDTLP-FLECPMCEKIVALPALGAHLRVDHGQ-EWFRCPAQIC-RTAIESETCLNHFLGQHGAYTCKNCLRLVFLHETKAHVKSKCQITVQLRTVPKAITVQEWKGQSEKQVMVTCAYCLEPVADAKYRTHVQEHHEPHITCGICQGVIRRSDFWSHVQVDH-DGETSRSEGCLICGESVTKMRTHLQLEHDLSGEAASL 456
            +T +    G   + C  C+ +     +  HL  AH  S   C G  C G   +       ++HL KVH          HFD    +G+  ++ + D H   +  +       K++      +  P  E+  + V+              +G+++++DGI Y + KD L  F++CP CEK   L  +G+H+  DH + E   C A  C +  I+      H L  H    CK C  L+ + E + H+ + C    +L+     +          K   + C YC   V       H+++ H   I C IC    R+S   +H+   H D +    + C IC   V K+  H++  H    E+  +
Sbjct:   26 VTLVRDSLGEIRVKCWGCEKIFELGLIQKHLIAAHRGS--QCPGKRCGGFLIVPSMNLLMSMHL-KVH----------HFDTTCPQGHIVNLFKYDHHIVENCKV------EKIQDVRSNSIVFPCDEVPIKKVT------GEKGTYYFDGELVVVDGINYCIRKDDLSIFVDCPFCEKACGLNIIGSHIIEDHSKDEVMPCIAPECPKKCIKPINLKYHILENHATLRCKECKWLLTIVEVQNHLNNYC--PNRLKDTGPVL--------PRKYPTLACPYCSMEV--LHLNDHIKKRHLHRIKCFICNKYFRKSQLMNHMAKHHKDNKELYYKRCSICNADVIKLDNHMEAMHGQGSESKKM 352
The following BLAST results are available for this feature:
BLAST of zinc finger protein 184-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000110292.237e-1823.90supercontig:LSalAtl2s:LSalAtl2s743:217313:218503:-... [more]
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BLAST of zinc finger protein 184-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of zinc finger protein 184-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold84_size396325supercontigscaffold84_size396325:234770..236505 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold84_size396325-snap-gene-2.36-mRNA-1maker-scaffold84_size396325-snap-gene-2.36-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold84_size396325:234770..236505+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold84_size396325-snap-gene-2.36 ID=maker-scaffold84_size396325-snap-gene-2.36|Name=zinc finger protein 184-like|organism=Tigriopus kingsejongensis|type=gene|length=1736bp|location=Sequence derived from alignment at scaffold84_size396325:234770..236505+ (Tigriopus kingsejongensis)
CAGTTGGAGTGGGAACACGGCCAGCGCCTCTGCCACGGCTCCGTTGCGTT
CTCCACCATGCCGGACTCGATCCAGATCTTGAACTCCCTGCCTCAGTAAG
TGATTCATGAAAGAGATAAGTAATTGCCATGCCCCTGCATTATTTCCCCT
CGCCCTAGGCCCAAGATGAGCTCGGCCAGCGGAATGTGGGCCAAGCCCGT
GTCCATGATTTCCATCGTCAAGCCCACGTTGACCACGGGCACGATGGGTG
TCGCCCAGCAGCGGATCACTTTGGCACCCAAGTACGTATGGGCAGGTGTT
TTGGGGAGGTTATCCGCTCCAGGGCTTCAATGAGTCCGGATCTCTTGTCT
GTGTAGAGCGATGAGCCATTACTCCCAGTCGGCCACCAAATTGGACGCTC
AGGAGGACCTTCTGAAAGACTGCGAAGAGTACAATTGCTCGGGGATCATC
ACCTTCATCCACAAGCCCAGTGGCGCCTTCTACATGACCTGTCCGGTCTG
CCAAGCCTTGTGCACTCGGTGAGTTGGAGCCTCTGTTTCCATCCCATGTG
GAGCTTGTGTGGATTATCGTTATGGGCGTGTCTCTTGCAGGAGCACTCTC
TCACCCCATCTGCAGCGGGCCCATGAGGTGTCGTACATTGCTTGCTCGGG
CGATGAATGTGCGGGCATCCGCTGCAAGACGGCCGAGTACGCCGTGCACT
TGAACAAGGTCCACGCCACGGCTTTCTGCACCCTCTGCGAGGTCCATTTC
GACATCAATCGAGGCTACGCGTCGCATATGGTGCGGACTGATCTCCATGC
CCGCTCGGACACCATTCTGCTGCCCAAGTCCATTCGAAGCAAGCTCAAGC
TCCAAGCCCCCAAACCCCTGTCGAGCCCCGCGCCGGAAATGCACACGGAG
TTTGTAAGCCTCAATTTTCGCTCGCGGCCTCGACCGGCCGCCATCCTCAT
GAATGGCGACATCATCCTGATCGACGGCATCAAGTACCTGCTCAAAGACA
CGCTGCCTTTCCTCGAGTGTCCCATGTGCGAGAAGATCGTAGCCCTGCCG
GCCTTGGGCGCTCATCTGCGGGTCGATCACGGGCAGGAGTGGTTCCGCTG
CCCGGCTCAGATCTGTCGGACGGCCATCGAGTCCGAGACCTGTCTCAATC
ACTTCTTGGGTCAGCACGGGGCCTACACGTGCAAGAACTGCTTGCGGCTC
GTGTTCCTGCACGAAACCAAGGCGCACGTCAAGTCCAAGTGTCAGATCAC
GGTTCAACTCCGAACCGTGCCCAAGGCCATCACCGTTCAGGAGTGGAAAG
GCCAGAGCGAGAAGCAGGTCATGGTCACCTGCGCCTACTGTTTGGAGCCT
GTGGCCGACGCCAAGTATCGCACTCACGTACAAGAGCATCATGAGCCGCA
TATCACCTGCGGCATCTGCCAAGGCGTCATCCGCAGATCCGACTTCTGGT
CCCACGTCCAAGTCGACCACGACGGCGAAACGAGCCGCAGCGAGGGCTGT
CTCATCTGTGGCGAGAGTGTGACCAAGATGAGGACACATCTCCAGCTCGA
GCACGACCTATCCGGAGAGGCCGCCAGTCTCGTGACTCAGAACTTTCACG
GCGATCTCGCCAAGCGAGCCAGGATCATGTTGCCTCGCTGTGACGATACG
GATGTCGAATAAAACCTCTATCTATGCTGCTGATACCGCCTTGGCGCCAC
GTGCGGGCACCCATATGCATTTATTGCGCGCTTTTC
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Synonyms
The feature 'zinc finger protein 184-like' has the following synonyms
Synonym
Tk09692
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