5-hydroxytryptamine receptor 6, maker-scaffold87_size395581-snap-gene-2.15 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 5-hydroxytryptamine receptor 6 vs. L. salmonis genes
Match: EMLSAG00000002058 (supercontig:LSalAtl2s:LSalAtl2s1375:33606:63116:-1 gene:EMLSAG00000002058 transcript:EMLSAT00000002058 description:"maker-LSalAtl2s1375-augustus-gene-0.6") HSP 1 Score: 105.916 bits (263), Expect = 2.317e-26 Identity = 58/154 (37.66%), Postives = 85/154 (55.19%), Query Frame = 0 Query: 5 ELQDIGDSFLTPFGMFLIEILLALCFFIGSFLNTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLEDAEAGSEVLIAVFQALLLVGTCG-SLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGI 157 E QD D F + ILL++CF + LN+ILL+V+ RRR FR +ISN+ L NL++ N F +L P+ D L + + S+ +I + + VG S+ SQ LI DQY+AVV PL Y ++N RC ++C WV + G+ Sbjct: 34 EDQDEDDEFSSNGKRIAFVILLSICFILSIILNSILLVVFARRRSFRKEISNRLLMNLIVLNCFSTLVLDPLFFLDIFLTS-----SLSDSIICGLSSFISVGVAAISMYSQFLIALDQYMAVVTPLKYTNRVNRIRCVLLCASAWVWGLLCGL 182
BLAST of 5-hydroxytryptamine receptor 6 vs. L. salmonis genes
Match: EMLSAG00000003359 (supercontig:LSalAtl2s:LSalAtl2s183:69972:87666:1 gene:EMLSAG00000003359 transcript:EMLSAT00000003359 description:"maker-LSalAtl2s183-augustus-gene-0.4") HSP 1 Score: 70.0922 bits (170), Expect = 5.171e-14 Identity = 61/235 (25.96%), Postives = 112/235 (47.66%), Query Frame = 0 Query: 24 ILLALCFFIGSFLNTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLEDAEAGSEVLIAVFQALLLVGTCGSLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGILNIIDYEHASLIPSQIPVLIQRWSVQDEAPTIGTTLFT--------------NCFV------LLLFIIPYGILTFMYTRVFSAAHKNTKKTRRNSICSITH 238 + L++ F +GSF NTILL+ + RR R+ SN+F+ NL+I N+ + ++ P+L D + + + + + ++ + S+ S L I DQYLA++ PL Y I R + + G W+I I G L + S + + + S+Q + T++ + C + + +F+ P ++++Y R+++ A N+K+TRR SI H Sbjct: 55 VFLSILFILGSFANTILLMAFFRRPALRT-XSNRFVVNLLIVNVLSSCLMLPLLCLDLSSTSSFIPSITXSIQCRLTEFVITWISSLSVFSTLAISFDQYLAILYPLRYQNLITKGRSWSLIIGSWIIPILTGCL-CTSIQDESTLSWETCAKREDPSLQHLPGSASTSVGSVSPPPPSLPPPYCWTCIIFPILNFVFIFLAPALFISYIYIRIYTEAKSNSKRTRRTSINPAEH 287
BLAST of 5-hydroxytryptamine receptor 6 vs. L. salmonis genes
Match: EMLSAG00000003021 (supercontig:LSalAtl2s:LSalAtl2s171:196627:197691:1 gene:EMLSAG00000003021 transcript:EMLSAT00000003021 description:"augustus_masked-LSalAtl2s171-processed-gene-2.0") HSP 1 Score: 50.0618 bits (118), Expect = 2.401e-7 Identity = 44/210 (20.95%), Postives = 97/210 (46.19%), Query Frame = 0 Query: 20 FLIEILLALCFFIGSFLNTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLEDAEAGSEVLIAVFQALLLVGTCGSLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGILNIIDYEHASLIPSQIPVLIQRWSVQDEAPTIGTTLFTNCFVLLLFIIPYGILTFMYTRVFSAAHKNTKKTR 229 +L IL++ F + + L L++V V ++ +N F+ +L I++ ++ P + ++ ++ ++ ++ + S+L+ +I D+Y A+ +P+ Y K+ KR I+ VWV S I I + L+ +P + +D +G +F++ + F P I+ F Y +++ AA ++T+ + Sbjct: 31 YLFAILIS--FGVATVLGNSLIIVSVLKKRSLHTATNYFITSLAIADFLVGLVVMP---FSATYEAMDQRWIFGPDWCDIWHSMDVLASTASILNLCVISLDRYWAITDPMTYPYKMTGKRAAILIVLVWVCSSVISFPAIAWWR---LVAENVPPEWKCPFTED----MGYLIFSS---TVSFYGPLTIMVFAYAKIYKAALEHTRSLK 225
BLAST of 5-hydroxytryptamine receptor 6 vs. SwissProt
Match: gi|1169212|sp|P42288.1|DRD1_DIDVI (RecName: Full=D(1A) dopamine receptor; AltName: Full=Dopamine D1 receptor) HSP 1 Score: 58.9214 bits (141), Expect = 8.989e-9 Identity = 44/193 (22.80%), Postives = 92/193 (47.67%), Query Frame = 0 Query: 37 NTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLEDAEA-GSEVLIAVFQALLLVGTCGSLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGILNI-IDYEHASLIPSQIPVLIQRWSVQDEAPTIGTTLFTNCFVLLLFIIPYGILTFMYTRVFSAAHKNTKK 227 NT++ +R R RS+++N F+ +L +S+L ++ P A+A + GS ++ A ++ + S+L+ +I D+Y A+ +P Y K+ K +I+ + W +S+ I + + +++ A + S + + D + + + L+ F IP I+ YTR++ A K ++ Sbjct: 40 NTLVCAAVIRFRHLRSKVTNFFVISLAVSDLLVAVLVMPW----KAVAEIAGFWPFGS--FCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFRYERKMTPKAAFILISVAWTLSVLISFIPVQLNWHKARPLSSPDGNVSSQDETMDNCDSSLSRTYAISSSLISFYIPVAIMIVTYTRIYRIAQKQIRR 226
BLAST of 5-hydroxytryptamine receptor 6 vs. SwissProt
Match: gi|110832828|sp|Q95136.2|DRD1_BOVIN (RecName: Full=D(1A) dopamine receptor; AltName: Full=Dopamine D1 receptor) HSP 1 Score: 56.225 bits (134), Expect = 7.593e-8 Identity = 51/205 (24.88%), Postives = 94/205 (45.85%), Query Frame = 0 Query: 37 NTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLEDAEA-GSEVLIAVFQALLLVGTCGSLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGILNIIDYEHASLIPSQIPVLIQRWSVQDE--APTIGTTLFTNC-----------FVLLLFIIPYGILTFMYTRVFSAAHKNTKK 227 NT++ +R R RS+++N F+ +L +S+L ++ P A+A + GS ++ A ++ + S+L+ +I D+Y A+ +P Y K+ K +I+ + W +S+ I S IP Q+ + + E A ++G T+ NC L+ F IP I+ YTR++ A K ++ Sbjct: 41 NTLVCAAVIRFRHLRSKVTNFFVISLAVSDLLVAVLVMPW----KAVAEIAGFWPFGS--FCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFRYERKMTPKAAFILISVAWTLSVLI-----------SFIPVQLSWHKAKPTGPSEGNATSLGKTI-NNCDSSLSRTYAISSSLISFYIPVAIMIVTYTRIYRIAQKQIRR 227
BLAST of 5-hydroxytryptamine receptor 6 vs. SwissProt
Match: gi|544135|sp|P35406.1|DRD1_CARAU (RecName: Full=D(1) dopamine receptor; AltName: Full=Dopamine D1 receptor) HSP 1 Score: 55.4546 bits (132), Expect = 9.552e-8 Identity = 45/210 (21.43%), Postives = 90/210 (42.86%), Query Frame = 0 Query: 37 NTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLEDAEAGSEVLIAVFQALLLVGTCGSLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGILNIIDYEHASLIPSQIPVLIQRWSV-QDEAPTIGTTLFTNCFVLLLFIIPYGILTFMYTRVFSAAHKNTKK----TRRNSICSITHDGI 241 NT++ + R RS+++N F+ +L +S+L L +L+ T ++ A ++ + S+L+ +I D+Y A+ +P Y K+ + ++M +G W +S+ I + + H + + V R + D + + L+ F IP I+ YT+++ A K ++ R I HD + Sbjct: 42 NTLVCAAVTKFRHLRSKVTNFFVISLAVSDL-----LVAVLVMPWKAVTEVAGFWPFGAFCDIWVAFDIMCSTASILNLCVISVDRYWAISSPFRYERKMTPRVAFVMISGAWTLSVLISFIPVQLKWHKAQPIGFLEVNASRRDLPTDNCDSSLNRTYAISSSLISFYIPVAIMIVTYTQIYRIAQKQIRRISALERAAESAQIRHDSM 246
BLAST of 5-hydroxytryptamine receptor 6 vs. SwissProt
Match: gi|118229|sp|P18901.2|DRD1_RAT (RecName: Full=D(1A) dopamine receptor; AltName: Full=Dopamine D1 receptor) HSP 1 Score: 54.299 bits (129), Expect = 2.524e-7 Identity = 49/207 (23.67%), Postives = 91/207 (43.96%), Query Frame = 0 Query: 37 NTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLEDAEAGSEVL---IAVFQALLLVGTCGSLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGILNIIDYEHASLIPSQIPVLIQR--WSVQDEAPTIGTTLFTNCFV-----------LLLFIIPYGILTFMYTRVFSAAHKNTKK 227 NT++ +R R RS+++N F+ +L +S+L ++ P A+A + AG L ++ A ++ + S+L+ +I D+Y A+ +P Y K+ K +I+ + W +S+ I S IP Q+ + W + ++ T NC L+ F IP I+ YT ++ A K ++ Sbjct: 40 NTLVCAAVIRFRHLRSKVTNFFVISLAVSDLLVAVLVMPW----KAVAEI----AGFWPLGPFCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFQYERKMTPKAAFILISVAWTLSVLI-----------SFIPVQLSWHKAKPTWPLDGNFTSLEDTEDDNCDTRLSRTYAISSSLISFYIPVAIMIVTYTSIYRIAQKQIRR 227
BLAST of 5-hydroxytryptamine receptor 6 vs. SwissProt
Match: gi|1169230|sp|P42290.1|DRD5_XENLA (RecName: Full=D(1B) dopamine receptor; AltName: Full=D(5) dopamine receptor; AltName: Full=Dopamine D5 receptor) HSP 1 Score: 54.299 bits (129), Expect = 2.628e-7 Identity = 53/229 (23.14%), Postives = 99/229 (43.23%), Query Frame = 0 Query: 35 FLNTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLEDAEAGSEVLIA---VFQALLLVGTCGSLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGILNIIDYEHASLIPSQIPVLIQRWSVQDEAPTIGTTLFTNCFVLLLFIIPYGILTFMYTRVF---------------SAAHKNTKKTRRNSICSITHDGIQRTS 245 F N ++ +R R RS+++N F+ +L +S+L ++ P A+A + AG A ++ A ++ + S+L+ +I D+Y A+ +P Y K+ + +M + W +S+ I + + H S L+ S + ++ T + L+ F IP I+ YTR++ +A H + ++ R CS H RTS Sbjct: 57 FGNILVCTAVMRFRHLRSRVTNIFIVSLAVSDLLVALLVMPW----KAVAEV----AGHWPFGAFCDIWVAFDIMCSTASILNLCVISVDRYWAISSPFRYERKMTQRVALLMISTAWALSVLISFIPVQLSWHKSETEDH---LLSNHSTGNCDSSLNRT-YAISSSLISFYIPVAIMIVTYTRIYRIAQIQIKRISTLERAAEHAQSCRSNRVDSCSRHHQTSLRTS 273
BLAST of 5-hydroxytryptamine receptor 6 vs. SwissProt
Match: gi|1706296|sp|P50130.1|DRD1_PIG (RecName: Full=D(1A) dopamine receptor; AltName: Full=Dopamine D1 receptor) HSP 1 Score: 54.299 bits (129), Expect = 3.116e-7 Identity = 51/208 (24.52%), Postives = 93/208 (44.71%), Query Frame = 0 Query: 37 NTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLED-AEAGSEVLIAVFQALLLVGTCGSLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGILNIIDYEHASLIPSQIPVLIQRWSVQDEAPTIG--TTLFT---NC-----------FVLLLFIIPYGILTFMYTRVFSAAHKNTKK 227 NT++ +R R RS+++N F+ +L +S+L ++ P A+A + GS ++ A ++ + S+L+ +I D+Y A+ +P Y K+ K +I+ + W +S+ I S IPV + + +P+ G T+L NC L+ F IP I+ YTR++ A K ++ Sbjct: 41 NTLVCAAVIRFRHLRSKVTNFFVISLAVSDLLVAVLVMPW----KAVAEIAGFWPFGS--FCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFRYERKMTPKAAFILISVAWTLSVLI---------------SFIPVQLSWHKAKPTSPSDGNVTSLGKTTHNCDSSLSRTYAISSSLISFYIPVAIMIVTYTRIYRIAQKQIRR 227
BLAST of 5-hydroxytryptamine receptor 6 vs. SwissProt
Match: gi|11131618|sp|O77680.1|DRD1_MACMU (RecName: Full=D(1A) dopamine receptor; AltName: Full=Dopamine D1 receptor) HSP 1 Score: 53.9138 bits (128), Expect = 4.026e-7 Identity = 50/208 (24.04%), Postives = 93/208 (44.71%), Query Frame = 0 Query: 37 NTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLED-AEAGSEVLIAVFQALLLVGTCGSLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGILNIIDYEHASLIPSQIPVLIQRWSVQDEAPTIG--TTL---FTNC-----------FVLLLFIIPYGILTFMYTRVFSAAHKNTKK 227 NT++ +R R RS+++N F+ +L +S+L ++ P A+A + GS ++ A ++ + S+L+ +I D+Y A+ +P Y K+ K +I+ + W +S+ I S IPV + + +P+ G T+L NC ++ F IP I+ YTR++ A K ++ Sbjct: 41 NTLVCAAVIRFRHLRSKVTNFFVISLAVSDLLVAVLVMPW----KAVAEIAGFWPFGS--FCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFRYERKMTPKAAFILISVAWTLSVLI---------------SFIPVQLSWHKAKPTSPSDGNATSLAETIDNCDSSLSRTYAISSSVISFYIPVAIMIVTYTRIYRIAQKQIRR 227
BLAST of 5-hydroxytryptamine receptor 6 vs. SwissProt
Match: gi|31340533|sp|Q61616.2|DRD1_MOUSE (RecName: Full=D(1A) dopamine receptor; AltName: Full=Dopamine D1 receptor) HSP 1 Score: 53.9138 bits (128), Expect = 4.292e-7 Identity = 45/196 (22.96%), Postives = 90/196 (45.92%), Query Frame = 0 Query: 37 NTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLEDAEA-GSEVLIAVFQALLLVGTCGSLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGILNIIDYEHASLIPSQIPVLIQRWSVQDEAPTIGTTLFTNCFV----LLLFIIPYGILTFMYTRVFSAAHKNTKK 227 NT++ +R R RS+++N F+ +L +S+L ++ P A+A + GS ++ A ++ + S+L+ +I D+Y A+ +P Y K+ K +I+ + W +S+ I + + H + P+ S++D T + + L+ F IP I+ YT ++ A K ++ Sbjct: 40 NTLVCAAVIRFRHLRSKVTNFFVISLAVSDLLVAVLVMPW----KAVAEIAGFWPFGS--FCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFQYERKMTPKAAFILISVAWTLSVLISFIPVQLSWHKA--KPTWPLDGNFTSLEDAEDDNCDTRLSRTYAISSSLISFYIPVAIMIVTYTSIYRIAQKQIRR 227
BLAST of 5-hydroxytryptamine receptor 6 vs. SwissProt
Match: gi|118228|sp|P21728.1|DRD1_HUMAN (RecName: Full=D(1A) dopamine receptor; AltName: Full=Dopamine D1 receptor) HSP 1 Score: 53.5286 bits (127), Expect = 4.660e-7 Identity = 50/208 (24.04%), Postives = 93/208 (44.71%), Query Frame = 0 Query: 37 NTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLEDAEA-GSEVLIAVFQALLLVGTCGSLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGILNIIDYEHASLIPSQIPVLIQRWSVQDEAPTIG--TTL---FTNC-----------FVLLLFIIPYGILTFMYTRVFSAAHKNTKK 227 NT++ +R R RS+++N F+ +L +S+L ++ P A+A + GS ++ A ++ + S+L+ +I D+Y A+ +P Y K+ K +I+ + W +S+ I S IPV + + +P+ G T+L NC ++ F IP I+ YTR++ A K ++ Sbjct: 41 NTLVCAAVIRFRHLRSKVTNFFVISLAVSDLLVAVLVMPW----KAVAEIAGFWPFGS--FCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFRYERKMTPKAAFILISVAWTLSVLI---------------SFIPVQLSWHKAKPTSPSDGNATSLAETIDNCDSSLSRTYAISSSVISFYIPVAIMIVTYTRIYRIAQKQIRR 227
BLAST of 5-hydroxytryptamine receptor 6 vs. SwissProt
Match: gi|118214|sp|P21918.2|DRD5_HUMAN (RecName: Full=D(1B) dopamine receptor; AltName: Full=D(5) dopamine receptor; AltName: Full=D1beta dopamine receptor; AltName: Full=Dopamine D5 receptor) HSP 1 Score: 53.5286 bits (127), Expect = 4.955e-7 Identity = 56/232 (24.14%), Postives = 95/232 (40.95%), Query Frame = 0 Query: 37 NTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLEDAEAGSEVLIA---VFQALLLVGTCGSLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGI----LNIIDYEHASLIPSQIPVLIQRWSVQDEAPTIGTTLFTNC-----------FVLLLFIIPYGILTFMYTRVFSAAHKNTKKTRRNSICSITHDGIQRTSTGIAP 250 N ++ VR R R+ ++N F+ +L +S+LF ++ P A+A + AG A V+ A ++ + S+L+ +I D+Y A+ P Y K+ + +M W +SI I LN + AS +P + W+ +E NC L+ F IP I+ YTR++ A ++ + H R+S AP Sbjct: 58 NVLVCAAIVRSRHLRANMTNVFIVSLAVSDLFVALLVMPW----KAVAEV----AGYWPFGAFCDVWVAFDIMCSTASILNLCVISVDRYWAISRPFRYKRKMTQRMALVMVGLAWTLSILISFIPVQLNWHRDQAASWGGLDLPNNLANWTPWEEDFWEPDVNAENCDSSLNRTYAISSSLISFYIPVAIMIVTYTRIYRIAQVQIRRISSLERAA-EHAQSCRSSAACAP 280
BLAST of 5-hydroxytryptamine receptor 6 vs. nr
Match: gi|1022766844|gb|KZS11837.1| (Uncharacterized protein APZ42_023377 [Daphnia magna]) HSP 1 Score: 110.153 bits (274), Expect = 1.117e-23 Identity = 76/274 (27.74%), Postives = 140/274 (51.09%), Query Frame = 0 Query: 8 DIGDSFLTPFGMFLIEILLALCFFIGSFLNTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLEDAEAGSEVLIAVF---QALLLVGTCGSLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGILNIIDY--EH---------------------------------ASLIPSQI-PVLIQRWSVQDEAPTIGTTLFTNCFVLLLFIIPYGILTFMYTRVFSAAHKNTKKTRRNSICSITHDGIQ 242 D+ S ++ +I +LLAL F + N ++++++ RR R+ +SN+F+ +L+ NL IL P++L D+ L + + S V AV QA+ + T GS+ + L+I DQY AV+ PLHYH ++ + ++ G W++++++ ++ D +H +S+ PS +Q W +Q + + T LF + V L +++P +L++MY R++SAAH+N+++TRR S+TH + Sbjct: 2 DVEGSVISAAAGIVIHVLLALLFLFSTVANVLVIVIFYRRPALRT-LSNRFVMSLLSFNLVATTILLPLILMDS-LIDVHLSYTHSTVDYAVCVAGQAVTTLVTTGSISAALVIAVDQYCAVMAPLHYHRRVTKTKACLLLAGQWILAVAMSAFSLPDSAGKHFWKGCSNRGDQLFALAGSSATSDDDQLNITTTPSSVTPSPANETSVQPW-LQSYSEEVWTMLFVSSSV-LCYVVPLALLSWMYLRIYSAAHRNSQRTRRT---SLTHSASE 268
BLAST of 5-hydroxytryptamine receptor 6 vs. nr
Match: gi|1317993193|ref|XP_023289298.1| (uncharacterized protein LOC105696617 [Orussus abietinus]) HSP 1 Score: 106.686 bits (265), Expect = 2.364e-22 Identity = 75/262 (28.63%), Postives = 125/262 (47.71%), Query Frame = 0 Query: 31 FIGSFL-NTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLEDAEAGSEVLIAVFQALLLVGTCGSLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGILNIIDYEHASL---------------IPSQIPVL--------------------IQRWSVQD---EAPTIGTT-------------LFTNCFVLLLFIIPYGILTFMYTRVFSAAHKNTKKTRRNSICSITHDG 240 +GSFL NT LLL +++R G R+ ISN+F+ NL +SNL +L+P+L+ D S L A+ + + T S+LS LLI DQY AVV+PL Y +I+ +C ++ +WVI++ G L ++ SL + ++I V I ++ +D E P +G ++T + LL++++P+ + + Y R++SAA +N+++TRR I G Sbjct: 42 LLGSFLLNTTLLLAFLKRPGLRT-ISNRFVMNLTVSNLLTCAVLSPLLMVD---------APSSRSLCAISEGATALVTTSSVLSVLLIAVDQYFAVVDPLRYRTRIDKLKCGVLIGSIWVIALIFGFLAGLNPHPRSLWLSCSAENDSIAIDDVQTRIDVFRRSNWTAGTVFEEPHLKFQNISKFPGEDLLEEFPVLGDEPRPSWWEYLSYGLVYTLSYGLLVYLVPFAGVCWTYVRIYSAARRNSERTRRTGSRPILSSG 293
BLAST of 5-hydroxytryptamine receptor 6 vs. nr
Match: gi|662213946|ref|XP_008480784.1| (PREDICTED: uncharacterized protein LOC103517525, partial [Diaphorina citri]) HSP 1 Score: 101.293 bits (251), Expect = 1.761e-20 Identity = 62/217 (28.57%), Postives = 108/217 (49.77%), Query Frame = 0 Query: 37 NTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLEDAEAGSEVLIAVFQALLLVGTC-GSLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGILNIIDYEHASLIPSQIPVLIQRWSVQDEAPTIGTTLFTNCFVLLLFIIPYGILTFMYTRVFSAAHKNTKKTRRNSICS-----------ITHDGI 241 N+ L+ ++++R R+ +SN+F+ NL+I+NL + + PIL YD L + VLIA + G C S+ S +LI DQY AV+ PL YH+ I + + + W IS+++G++ + + + S + P+L F ++F+IP+ + ++Y ++ AAH+N+ +TR N S I+HD I Sbjct: 2 NSQLVFIFIKRPALRN-LSNRFIINLLITNLAACWSILPILYYDTILYDSMERSTNLSVLIACIIEGITAGMCTASVFSVVLIAVDQYFAVLEPLRYHSIIRKRATWQLFCMAWSISLTVGLMGVANNFYRSAYAAVYPIL---------------------FSFIIFLIPFIAICYIYFCIYWAAHENSLRTRTNCSSSLFNECSNSDLRISHDSI 196
BLAST of 5-hydroxytryptamine receptor 6 vs. nr
Match: gi|1330889864|gb|PNF22062.1| (hypothetical protein B7P43_G09727 [Cryptotermes secundus]) HSP 1 Score: 100.908 bits (250), Expect = 2.034e-20 Identity = 67/206 (32.52%), Postives = 107/206 (51.94%), Query Frame = 0 Query: 32 IGSFLNTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLEDAEAGSEVLIAVFQALLLVGTCGSLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGILNIIDYEHASL--IPSQIPVLIQRWSVQDEAPTIGTTLFTNCFVLLLFIIPYGILTFMYTRVFSAAHKNTKKTRRNSICS 235 +GS N ++ +V+ RR RS SN+F+ +LV++NL +FI+ PILL + L A L V L + ++ S L I D+Y AV++PLHY I R M G W ++ G+L + A L +P+ + V + DE T + V L F +P L ++Y R+++AAH+N+++TRR+SI + Sbjct: 120 VGSGANILVSIVFHRRPALRSP-SNRFVLSLVLANLMTSFIVVPILL----VQVLHHEVAALSWLRQVSSGLTTLAVTAAIFSVLAIAVDRYNAVLSPLHYAMTITRGRSRAMIAGAWGVA---GLLATPPFLGALLSPVPATVAVHYSNCTAGDEGEVFRLT-YALVLVTLGFTLPLFALCWIYARMYNAAHRNSERTRRHSISA 316
BLAST of 5-hydroxytryptamine receptor 6 vs. nr
Match: gi|755925336|ref|XP_011298720.1| (PREDICTED: uncharacterized protein LOC105263906 [Fopius arisanus]) HSP 1 Score: 100.523 bits (249), Expect = 3.034e-20 Identity = 65/212 (30.66%), Postives = 112/212 (52.83%), Query Frame = 0 Query: 37 NTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLEDAEAGSEVLIAVFQALLLVGTCGSLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGILNIIDYEHASL----IPSQIPVLIQRWSVQDEAPTIGTT--------------LFTNCFVLLLFIIPYGILTFMYTRVFSAAHKNTKKTRR 230 N+ LLL +++R G R+ ISN+F+ NL ISN+ +L +L+ D ++ + AV + + T S+ S LLI DQYLAVV+PL Y +I+ +C I+ VW+IS+++ ++ ++ S+ PS V + DE +I ++T F L +++P+ + ++Y R+++AAH N+K+TRR Sbjct: 44 NSTLLLAFLKRPGLRT-ISNRFVMNLTISNVITCCVLNILLMLDGPVS------HSKPCMCAVAEGATALVTTSSVFSVLLIALDQYLAVVDPLRYRTRIDTLKCGILVASVWIISLTLSLIAALNPNPKSIWLTCQPSVNSVALNSSEKIDETRSIDQQINVDESNISMTYGLIYTLAFSLFGYLLPFVGVCWIYIRIYTAAHNNSKRTRR 248
BLAST of 5-hydroxytryptamine receptor 6 vs. nr
Match: gi|321459374|gb|EFX70428.1| (LOW QUALITY PROTEIN: hypothetical protein DAPPUDRAFT_257138 [Daphnia pulex]) HSP 1 Score: 100.138 bits (248), Expect = 3.382e-20 Identity = 75/264 (28.41%), Postives = 134/264 (50.76%), Query Frame = 0 Query: 8 DIGDSFLTPFGMFLIEILLALCFFIGSFLNTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLEDAEAGSEVLIAVF---QALLLVGTCGSLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGILNIID-----------------YEHASLI------------------PSQIPVLIQRWSVQDEAPTIGTTLFTNCFVLLLFIIPYGILTFMYTRVFSAAHKNTKKTRRNSI 233 D+ S ++ +I +LLAL F + N ++++++ RR R+ +SN+F+ +L+ NL +L P++L D +L + + S V AV QA+ + T GS+ + L+I DQY AV+ PLHYH ++ + ++ G WV+++++ ++ D + ASL PS L W Q + + T LF + V L +++P +L++MY R++SAAH+N+++TRR S+ Sbjct: 2 DVEGSVISAAAGIVIHVLLALLFLFATVANVLVIVIFYRRPALRT-LSNRFVMSLLSFNLVATTVLLPLILMD-SLIDVHLSYTHSTVDYAVCVAGQAVTTLVTTGSISAALVIAVDQYCAVMAPLHYHRRVTKTKACLLLAGQWVLAVAMSAFSLPDSAGKHFWKGCSNRDDQLFALASLSATSDDDQLNLTSTVSAPPPSSNETLSPVW-FQSYSEEVWTMLFVSSSV-LCYVVPLALLSWMYLRIYSAAHRNSQRTRRTSL 261
BLAST of 5-hydroxytryptamine receptor 6 vs. nr
Match: gi|646700282|gb|KDR10486.1| (5-hydroxytryptamine receptor 6 [Zootermopsis nevadensis]) HSP 1 Score: 98.2117 bits (243), Expect = 3.668e-20 Identity = 68/214 (31.78%), Postives = 107/214 (50.00%), Query Frame = 0 Query: 19 MFLIEILLALCFFIGSFLNTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLEDAEAGSEVLIAVFQALLLVGTCG-SLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGILNIIDYEHASLIPSQIPVLIQRWSVQDEAPTIGTTLFTNCFVLLLFIIPYGILTFMYTRVFSAAHKNTKKTRRN 231 + L E++LAL F G+ N +LLV RR R+ +SN+F+ NL+ +NL +L P+ L NA+ + G V G C S+L+ LI DQY AVV+PL YHA+I+ R + W ++ +G+L WS + + F F+ ++F++P+ + +MY ++SAAHKN+K+TRR Sbjct: 4 VLLCEVVLALIFLTGTAANATVLLVLYRRPALRT-LSNRFVVNLLCTNLVSTSVLLPLALL-NAI----EHPVGEGVT---------AGMCAASVLAVFLISLDQYCAVVDPLRYHARISKARSVGLMLAAWSVACLLGVLRGAG----------------EWSEHFDY----RSTFAAVFIAVVFLVPFFAILWMYVCIYSAAHKNSKRTRRT 182
BLAST of 5-hydroxytryptamine receptor 6 vs. nr
Match: gi|1228008822|ref|XP_021936327.1| (histamine H2 receptor-like [Zootermopsis nevadensis]) HSP 1 Score: 98.2117 bits (243), Expect = 5.096e-20 Identity = 68/214 (31.78%), Postives = 107/214 (50.00%), Query Frame = 0 Query: 19 MFLIEILLALCFFIGSFLNTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLEDAEAGSEVLIAVFQALLLVGTCG-SLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGILNIIDYEHASLIPSQIPVLIQRWSVQDEAPTIGTTLFTNCFVLLLFIIPYGILTFMYTRVFSAAHKNTKKTRRN 231 + L E++LAL F G+ N +LLV RR R+ +SN+F+ NL+ +NL +L P+ L NA+ + G V G C S+L+ LI DQY AVV+PL YHA+I+ R + W ++ +G+L WS + + F F+ ++F++P+ + +MY ++SAAHKN+K+TRR Sbjct: 30 VLLCEVVLALIFLTGTAANATVLLVLYRRPALRT-LSNRFVVNLLCTNLVSTSVLLPLALL-NAI----EHPVGEGVT---------AGMCAASVLAVFLISLDQYCAVVDPLRYHARISKARSVGLMLAAWSVACLLGVLRGAG----------------EWSEHFDY----RSTFAAVFIAVVFLVPFFAILWMYVCIYSAAHKNSKRTRRT 208
BLAST of 5-hydroxytryptamine receptor 6 vs. nr
Match: gi|970909993|ref|XP_015121153.1| (PREDICTED: uncharacterized protein LOC107043947 [Diachasma alloeum] >gi|970909995|ref|XP_015121154.1| PREDICTED: uncharacterized protein LOC107043947 [Diachasma alloeum] >gi|970909997|ref|XP_015121155.1| PREDICTED: uncharacterized protein LOC107043947 [Diachasma alloeum] >gi|970909999|ref|XP_015121156.1| PREDICTED: uncharacterized protein LOC107043947 [Diachasma alloeum]) HSP 1 Score: 98.2117 bits (243), Expect = 1.648e-19 Identity = 67/214 (31.31%), Postives = 119/214 (55.61%), Query Frame = 0 Query: 36 LNTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLEDAEAGSEVLIAVFQALLLVGTCGSLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGILNIIDYEHASL----IPSQ----------IPVLIQRWSVQDEAPTIGTTLFTNCFVLLL-----FIIPYGILTFMYTRVFSAAHKNTKKTRR 230 LN+ LLL +++R G R+ ISN+F+ NL++SNL IL P+L+ D ++ ++ + + + + T S+ S LLI DQYLAVV+PL Y +I+ +C I+ T +W+IS++ +L + SL P+Q + + + +++ I ++ T F+L L +++P+ + ++YT ++SAAH N+K+TRR Sbjct: 39 LNSTLLLAFLKRPGLRT-ISNRFVMNLIVSNLLTCCILNPLLILDASVLQIK------PCICTLAEGATALVTTSSVFSVLLIAIDQYLAVVDPLRYRTRIDTLKCGILITSLWIISLTFSLLAAFNPNPKSLWLICQPNQWDPSKNLSTNFDLSMVNLTRKNDNQQIEISM-TYGFILALLSLFVYLLPFIGVCWIYTSIYSAAHNNSKRTRR 244
BLAST of 5-hydroxytryptamine receptor 6 vs. nr
Match: gi|815897196|ref|XP_012249358.1| (muscarinic acetylcholine receptor gar-3 [Bombus impatiens]) HSP 1 Score: 95.9005 bits (237), Expect = 9.913e-19 Identity = 69/255 (27.06%), Postives = 120/255 (47.06%), Query Frame = 0 Query: 29 CFFIGSFLNTILLLVYVRRRGFRSQISNKFLFNLVISNLFWNFILTPILLYDNALATLEDAE----AGSEVLIAVFQALLLVGTCGSLLSQLLIGTDQYLAVVNPLHYHAKINNKRCYIMCTGVWVISISIGIL-------------------NIIDYEHAS-------------LIPSQIPVLIQRWSVQDEAPTIGTT----------------LFTNCFVLLLFIIPYGILTFMYTRVFSAAHKNTKKTRRN 231 CF LN ILLL ++ R R+ ISN+F+ NL +SNL I+ P+L+ D A++T ++ A + ++ + + V T S+ S LLI DQY AV++PL Y A+++ +C I+ W+ISI G L N +++ S L S IP +++ S+ D+ I T ++ + + + IP+ + ++Y ++ AAH+N+++ RR+ Sbjct: 39 CFL----LNVILLLAFLVRPSLRT-ISNRFVMNLTVSNLLVCAIMNPLLIMD-AVSTSSNSSILDSAPVPNICSMSEGAMAVVTTSSVFSVLLIAVDQYFAVMDPLRYRARVDKLKCGILILSTWMISIVFGFLAFFNSNPQSLWLFCISKEQNSVNFSTESTLTVLENKTNNNELNTSAIPEIVETVSLSDDIDLIENTTVIFDTLIDDTITYGFIYAIVYTIFAYFIPFIAVCWIYVTIYVAAHRNSERARRS 287 The following BLAST results are available for this feature:
BLAST of 5-hydroxytryptamine receptor 6 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of 5-hydroxytryptamine receptor 6 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 16
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BLAST of 5-hydroxytryptamine receptor 6 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold87_size395581:363640..371130+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold87_size395581-snap-gene-2.15 ID=maker-scaffold87_size395581-snap-gene-2.15|Name=5-hydroxytryptamine receptor 6|organism=Tigriopus kingsejongensis|type=gene|length=7491bp|location=Sequence derived from alignment at scaffold87_size395581:363640..371130+ (Tigriopus kingsejongensis)back to top Synonyms
The feature '5-hydroxytryptamine receptor 6' has the following synonyms
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