upf0368 protein cxorf26 homolog, maker-scaffold886_size84816-snap-gene-0.27 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of upf0368 protein cxorf26 homolog vs. L. salmonis genes
Match: EMLSAG00000012848 (supercontig:LSalAtl2s:LSalAtl2s97:2021894:2023648:-1 gene:EMLSAG00000012848 transcript:EMLSAT00000012848 description:"snap_masked-LSalAtl2s97-processed-gene-20.21") HSP 1 Score: 190.66 bits (483), Expect = 2.557e-61 Identity = 83/144 (57.64%), Postives = 114/144 (79.17%), Query Frame = 0 Query: 6 QGVGAAGLLAAADTLAQPAEEFGNDSRVESLWAMKAMEHAEVYFNILCSVDPLSIPRLSPCDDDIYRQFREEFPTLKVDRMTEADLKSDQAKANWRQFCDEFKHVDDFSFATLLRLDASGDYTEANSIIVTKIQFYAIELARNK 149 +G+GA GL+AAA+TL +P+EEFGND RVE+LW MKA+EHAEVYFN+LCS+ P + RLSP DD I+ +F+ EF + V + E+ LKS + K WR FC EF++++D++F TL+RLD+ DY+E NSII TKIQF+AIE++RN+ Sbjct: 5 RGIGAEGLIAAAETLGRPSEEFGNDERVETLWVMKAIEHAEVYFNLLCSIKPSELSRLSPDDDKIHDRFKSEFSNIDVKVIKESLLKSQENKEKWRSFCKEFEYIEDYNFGTLIRLDSELDYSEENSIITTKIQFFAIEISRNR 148
BLAST of upf0368 protein cxorf26 homolog vs. SwissProt
Match: gi|74733325|sp|Q9BVG4.1|PBDC1_HUMAN (RecName: Full=Protein PBDC1; AltName: Full=Polysaccharide biosynthesis domain-containing protein 1) HSP 1 Score: 155.606 bits (392), Expect = 2.014e-46 Identity = 72/145 (49.66%), Postives = 103/145 (71.03%), Query Frame = 0 Query: 13 LLAAADTLAQPAEEFGNDSRVESLWAMKAMEHAEVYFNILCSVDPLSIPRLSPCDDDIYRQFREEFPTLKVDRMTEADLKSDQAKANWRQFCDEFKH-VDDFSFATLLRLDASGDYTEANSIIVTKIQFYAIELARNKEGHNSPI 156 L++ A L+ PAE +GND +E WAM+AM+HAEVY+ ++ SVDP + +L+ DD IY +FR+ F TL++D + +LKS+ AK WR FC +F V+DF++ TLLRLD S YTE N+I +IQF+AIE+ARN+EG+N + Sbjct: 15 LVSVAHALSLPAESYGNDPDIEMAWAMRAMQHAEVYYKLISSVDPQFL-KLTKVDDQIYSEFRKNFETLRIDVLDPEELKSESAKEKWRPFCLKFNGIVEDFNYGTLLRLDCSQGYTEENTIFAPRIQFFAIEIARNREGYNKAV 158
BLAST of upf0368 protein cxorf26 homolog vs. SwissProt
Match: gi|81916920|sp|Q9D0B6.1|PBDC1_MOUSE (RecName: Full=Protein PBDC1; AltName: Full=Polysaccharide biosynthesis domain-containing protein 1) HSP 1 Score: 151.369 bits (381), Expect = 3.326e-45 Identity = 76/166 (45.78%), Postives = 109/166 (65.66%), Query Frame = 0 Query: 14 LAAADTLAQPAEEFGNDSRVESLWAMKAMEHAEVYFNILCSVDPLSIPRLSPCDDDIYRQFREEFPTLKVDRMTEADLKSDQAKANWRQFCDEFKH-VDDFSFATLLRLDASGDYTEANSIIVTKIQFYAIELARNKEGHNSPIRHNFKPIPRKRRPKTGPAGGGS 178 L+ A L+ P E +GND +E WA++AM+HAEVY+ ++ SVDP + +L+ DD IY +FRE F TL+VD + +LKS+ AK WR FC +F+ V+D+++ TLLRLD S YTE N+I +IQF+AIE+ARN+EG+N K + + K G G G+ Sbjct: 16 LSIAHALSHPPESYGNDPDIEMAWAIRAMQHAEVYYKLISSVDPQFL-KLTKVDDQIYSEFREIFETLRVDVLDPEELKSESAKEKWRPFCLKFEGIVEDYNYGTLLRLDCSQGYTEENTIFAPRIQFFAIEIARNREGYN-------KAVSVSIQDKEGEEGAGN 173
BLAST of upf0368 protein cxorf26 homolog vs. SwissProt
Match: gi|74676485|sp|Q08971.1|YP225_YEAST (RecName: Full=Protein PBDC1 homolog) HSP 1 Score: 108.997 bits (271), Expect = 2.461e-29 Identity = 61/138 (44.20%), Postives = 84/138 (60.87%), Query Frame = 0 Query: 24 AEEFGNDSRVESLWAMKAMEHAEVYFNILCSVDPLSIPRLSPCDDDIYRQFREEFPTLK----VDRMTEADLKSDQAKANWRQFCDEF-KHVDDFSFATLLRLDASGDYTEANSIIVTKIQFYAIELARNKEGHNSPI 156 AE N +E +A+ A+E AE Y+ +L SV P S RL+ DD+IY F E FP K V + TE +LK+ +AK WR+F F K ++D++F TLLR DAS +Y + + V ++QFYA E+ARNK G N I Sbjct: 6 AETADNLEDIEKQFAVVAVEQAETYWKLLTSV-PGSKLRLTKFDDEIYENFMERFPEYKDVERVKKFTEEELKTKEAKERWRKFFTIFEKKIEDYNFGTLLRTDASAEYGQFTTCFVVRLQFYAFEIARNKHGLNDWI 142
BLAST of upf0368 protein cxorf26 homolog vs. SwissProt
Match: gi|74582218|sp|O59727.1|YHX7_SCHPO (RecName: Full=Protein PBDC1 homolog) HSP 1 Score: 83.1889 bits (204), Expect = 2.392e-19 Identity = 49/141 (34.75%), Postives = 82/141 (58.16%), Query Frame = 0 Query: 24 AEEFGNDSRVESLWAMKAMEHAEVYFNILCSVDPLSIPRLSPCDDDIYRQFREEFPTLK----VDRMTEADLKSDQAKANWRQFCDEF-KHVDDFSFATLLRLDASGDYTEANSIIVTKIQFYAIELARNKEGHNSPIRHN 159 AE N + +E +A+KA+E A++Y+++L + S +L+ DD+I+ FP K + E ++KS + KA WR F + K VDD++F TLLR+ + +Y + +I V ++QF A E+ARN+ G N I+ + Sbjct: 8 AENAENAAEIEMQFAVKAVEQAQIYWSLL-EMRKGSELKLTKYDDEIFEDLINTFPEFKDPKTASFVNEDEMKSAKGKAAWRPFLMRYEKKVDDYNFGTLLRIKNTDEYEQETTIFVPRMQFLAYEIARNRYGLNDWIKKD 147
BLAST of upf0368 protein cxorf26 homolog vs. nr
Match: gi|1325282348|ref|XP_023325868.1| (protein PBDC1-like [Eurytemora affinis]) HSP 1 Score: 239.195 bits (609), Expect = 4.402e-77 Identity = 116/206 (56.31%), Postives = 147/206 (71.36%), Query Frame = 0 Query: 1 MALDNQGVGAAGLLAAADTLAQPAEEFGNDSRVESLWAMKAMEHAEVYFNILCSVDP--LSIPRLSPCDDDIYRQFREEFPTLKVDRMTEADLKSDQAKANWRQFCDEFKHVDDFSFATLLRLDASGDYTEANSIIVTKIQFYAIELARNKEGHNSPIRHNFKPIPRKRRPKT----GPAGGGSIPNMSDVEAELQEILAGKHPML 200 M++ N GVGA GLLAA L A+EFGND R+E LWAMKAM+HAEVYFN+LCSV+P L + DD IYR+FR+ FP L + ++TEADLKS+ AKA WR F D H++DFS LLRLDAS DY+E+N+II KIQF AIE+ARN+EG N IR FKP+ RK R KT G GG++ MS++E ELQ+I+ G+H ++ Sbjct: 1 MSIVNHGVGAEGLLAAQSVLGSSADEFGNDGRIEQLWAMKAMDHAEVYFNLLCSVEPSRLKLTGSQESDDAIYREFRDTFPNLSLVKLTEADLKSEDAKAVWRLFADNHHHIEDFSLGALLRLDASEDYSESNTIISIKIQFLAIEIARNREGLNDGIRGKFKPVERKARAKTSELPGTTRGGAV--MSEIEHELQQIIGGQHHLM 204
BLAST of upf0368 protein cxorf26 homolog vs. nr
Match: gi|225710616|gb|ACO11154.1| (UPF0368 protein Cxorf26 homolog [Caligus rogercresseyi]) HSP 1 Score: 219.935 bits (559), Expect = 1.423e-69 Identity = 104/199 (52.26%), Postives = 142/199 (71.36%), Query Frame = 0 Query: 6 QGVGAAGLLAAADTLAQPAEEFGNDSRVESLWAMKAMEHAEVYFNILCSVDPLSIPRLSPCDDDIYRQFREEFPTLKVDRMTEADLKSDQAKANWRQFCDEFKHVDDFSFATLLRLDASGDYTEANSIIVTKIQFYAIELARNKEGHNSPIRHNFKPIPRKRRPKTGPAGGGSIPN---MSDVEAELQEILAGKHPMLK 201 +GVGA GL+AAA+TL +P++EFGND RVE++W MKA+EHA+VYFNILCS+ P + RLSP D+ I+ +F+ FP L+V + E+DLKS + K WR FC +F+H++D++F TLLRLD++ DY+E NSII TKI FYAIE+ARN+ +N I+ +KP RK A PN +VE ELQ+IL G H +L+ Sbjct: 5 RGVGAEGLIAAAETLGRPSDEFGNDERVEAIWVMKAIEHADVYFNILCSITPSQLTRLSPDDEAIHSKFKSTFPDLEVKVIKESDLKSAENKEKWRAFCKDFEHIEDYNFGTLLRLDSALDYSEENSIITTKIHFYAIEIARNRLCYNDVIKSKYKPKARKPSEAIKEADAPPPPNRQFTKEVEHELQQILTGDHQLLQ 203
BLAST of upf0368 protein cxorf26 homolog vs. nr
Match: gi|1339077991|ref|XP_023726406.1| (protein PBDC1 isoform X2 [Cryptotermes secundus]) HSP 1 Score: 212.231 bits (539), Expect = 5.509e-67 Identity = 105/163 (64.42%), Postives = 128/163 (78.53%), Query Frame = 0 Query: 1 MALDNQGVGAAGLLAAADTLAQPAEEFGNDSRVESLWAMKAMEHAEVYFNILCSVDPLSIPRLSPCDDDIYRQFREEFPTLKVDRMTEADLKSDQAKANWRQFCDEFKH-VDDFSFATLLRLDASGDYTEANSIIVTKIQFYAIELARNKEGHNSPIRHNFKP 162 MA + VGA GL+A A+ L +PAEEF ND VE+LWAMKA+EHAEVYFNILCSVDP + +L+P DD+IY+ FREEFP LKVD + E LKS +AK WR FC++FK V+D+SF TLLRLD SG+Y+E NSI+VT+IQFYAIEL+RN+EG N IR FKP Sbjct: 3 MASVSNDVGADGLIAGANVLTRPAEEFDNDPSVEALWAMKALEHAEVYFNILCSVDP-KLLKLTPHDDNIYKTFREEFPDLKVDILDEEGLKSFEAKQKWRPFCEKFKDVVEDYSFGTLLRLDHSGEYSEHNSILVTRIQFYAIELSRNREGLNDCIRSKFKP 164
BLAST of upf0368 protein cxorf26 homolog vs. nr
Match: gi|1227969696|ref|XP_021916232.1| (protein PBDC1 [Zootermopsis nevadensis]) HSP 1 Score: 208.379 bits (529), Expect = 1.762e-65 Identity = 102/163 (62.58%), Postives = 127/163 (77.91%), Query Frame = 0 Query: 1 MALDNQGVGAAGLLAAADTLAQPAEEFGNDSRVESLWAMKAMEHAEVYFNILCSVDPLSIPRLSPCDDDIYRQFREEFPTLKVDRMTEADLKSDQAKANWRQFCDEFKH-VDDFSFATLLRLDASGDYTEANSIIVTKIQFYAIELARNKEGHNSPIRHNFKP 162 MA + VGA LLA A L++PAEEFGND VE +WA+KA EHAEVYFNILCSVDP + +L+P D+DIYR FREEFP ++VD++ E LKS +AK WR FC++FK V+D+SF TLLRLD SG+Y+E NSI+VT+IQFYA+EL+RN+EG N IR FKP Sbjct: 3 MASVSGDVGADELLAGASVLSRPAEEFGNDPSVEIVWAVKAFEHAEVYFNILCSVDP-KLLKLTPHDEDIYRAFREEFPDIRVDKLDEDQLKSPEAKEKWRPFCEKFKDVVEDYSFGTLLRLDHSGEYSEQNSILVTRIQFYAVELSRNREGLNDCIRSKFKP 164
BLAST of upf0368 protein cxorf26 homolog vs. nr
Match: gi|1339077987|ref|XP_023726403.1| (protein PBDC1 isoform X1 [Cryptotermes secundus] >gi|1339077989|ref|XP_023726405.1| protein PBDC1 isoform X1 [Cryptotermes secundus]) HSP 1 Score: 208.764 bits (530), Expect = 2.260e-65 Identity = 102/155 (65.81%), Postives = 124/155 (80.00%), Query Frame = 0 Query: 9 GAAGLLAAADTLAQPAEEFGNDSRVESLWAMKAMEHAEVYFNILCSVDPLSIPRLSPCDDDIYRQFREEFPTLKVDRMTEADLKSDQAKANWRQFCDEFKH-VDDFSFATLLRLDASGDYTEANSIIVTKIQFYAIELARNKEGHNSPIRHNFKP 162 GA GL+A A+ L +PAEEF ND VE+LWAMKA+EHAEVYFNILCSVDP + +L+P DD+IY+ FREEFP LKVD + E LKS +AK WR FC++FK V+D+SF TLLRLD SG+Y+E NSI+VT+IQFYAIEL+RN+EG N IR FKP Sbjct: 24 GADGLIAGANVLTRPAEEFDNDPSVEALWAMKALEHAEVYFNILCSVDP-KLLKLTPHDDNIYKTFREEFPDLKVDILDEEGLKSFEAKQKWRPFCEKFKDVVEDYSFGTLLRLDHSGEYSEHNSILVTRIQFYAIELSRNREGLNDCIRSKFKP 177
BLAST of upf0368 protein cxorf26 homolog vs. nr
Match: gi|1061113469|ref|XP_017882846.1| (PREDICTED: protein PBDC1 [Ceratina calcarata]) HSP 1 Score: 202.216 bits (513), Expect = 3.941e-63 Identity = 96/157 (61.15%), Postives = 121/157 (77.07%), Query Frame = 0 Query: 7 GVGAAGLLAAADTLAQPAEEFGNDSRVESLWAMKAMEHAEVYFNILCSVDPLSIPRLSPCDDDIYRQFREEFPTLKVDRMTEADLKSDQAKANWRQFCDEFKHV-DDFSFATLLRLDASGDYTEANSIIVTKIQFYAIELARNKEGHNSPIRHNFKP 162 V A LLA + L++PA+EF ND VE++WAMKAMEHAEVYFNILCSVDP + +L+P D+ IY+ FRE FP LKVD++ E +LKS + KA WR FC++FK V +D+SF TLLR D GDY+E NSI+ T+IQFYA+ELARN+EGHN IR +KP Sbjct: 6 NVTADQLLAGTNVLSRPADEFDNDPSVEAMWAMKAMEHAEVYFNILCSVDPKYL-KLTPHDELIYKTFREVFPDLKVDKIKEDELKSPEGKAKWRPFCEQFKDVVEDYSFGTLLRADCEGDYSEENSILTTRIQFYAVELARNREGHNDDIRRKYKP 161
BLAST of upf0368 protein cxorf26 homolog vs. nr
Match: gi|987923344|ref|XP_015437947.1| (PREDICTED: protein PBDC1 [Dufourea novaeangliae] >gi|1016171921|gb|KZC14957.1| UPF0368 protein Cxorf26 like protein [Dufourea novaeangliae]) HSP 1 Score: 201.83 bits (512), Expect = 7.188e-63 Identity = 95/156 (60.90%), Postives = 119/156 (76.28%), Query Frame = 0 Query: 8 VGAAGLLAAADTLAQPAEEFGNDSRVESLWAMKAMEHAEVYFNILCSVDPLSIPRLSPCDDDIYRQFREEFPTLKVDRMTEADLKSDQAKANWRQFCDEFKH-VDDFSFATLLRLDASGDYTEANSIIVTKIQFYAIELARNKEGHNSPIRHNFKP 162 V A LLA + L +PAEEF ND VE++WAMKAMEHAEVYFNILCSVDP + +L+P D+ IY+ FRE FP LKVD++ E +LKS++ K WR FC++FK V+D+SF TLLR D GDY+E NSI+ T+IQFYAIEL RN+EG+N IR +KP Sbjct: 7 VTADQLLAGSSVLTRPAEEFSNDPSVEAMWAMKAMEHAEVYFNILCSVDP-KLLKLTPHDEQIYKTFREIFPDLKVDKINEDELKSEEGKVRWRPFCEQFKGLVEDYSFGTLLRADCEGDYSEENSILTTRIQFYAIELTRNREGYNDGIRKKYKP 161
BLAST of upf0368 protein cxorf26 homolog vs. nr
Match: gi|1233194089|ref|XP_022197324.1| (protein PBDC1 [Nilaparvata lugens]) HSP 1 Score: 201.06 bits (510), Expect = 1.031e-62 Identity = 93/156 (59.62%), Postives = 118/156 (75.64%), Query Frame = 0 Query: 8 VGAAGLLAAADTLAQPAEEFGNDSRVESLWAMKAMEHAEVYFNILCSVDPLSIPRLSPCDDDIYRQFREEFPTLKVDRMTEADLKSDQAKANWRQFCDEFKHV-DDFSFATLLRLDASGDYTEANSIIVTKIQFYAIELARNKEGHNSPIRHNFKP 162 +G LLA L +PAEEF ND VE++WAMKA EHAEVYFNILCSVDP I RL+P DD IY+ FRE FP LK++ + E ++KS + K WR FC++FK V +D+SF TLLR+D++GDY+E NS +V +IQFYAIELARN+EGHN +R +KP Sbjct: 7 LGVNELLAGGSLLTRPAEEFENDQTVEAMWAMKAFEHAEVYFNILCSVDP-KILRLTPHDDSIYKTFREHFPELKIENIDENEMKSKEGKDKWRPFCEQFKDVVEDYSFGTLLRIDSTGDYSEKNSTLVPRIQFYAIELARNREGHNDVVRSKYKP 161
BLAST of upf0368 protein cxorf26 homolog vs. nr
Match: gi|383862499|ref|XP_003706721.1| (PREDICTED: protein PBDC1 isoform X3 [Megachile rotundata]) HSP 1 Score: 199.904 bits (507), Expect = 4.084e-62 Identity = 95/155 (61.29%), Postives = 119/155 (76.77%), Query Frame = 0 Query: 8 VGAAGLLAAADTLAQPAEEFGNDSRVESLWAMKAMEHAEVYFNILCSVDPLSIPRLSPCDDDIYRQFREEFPTLKVDRMTEADLKSDQAKANWRQFCDEFKH-VDDFSFATLLRLDASGDYTEANSIIVTKIQFYAIELARNKEGHNSPIRHNFK 161 V A LLA + L++PAEEF ND VE++WA+KAMEHAEVYFNILCSVDP +L+P DD IY+ FR+ FP LKVD++ E +LKSDQ K WR FC++FK V+D+ F TLLR D GDY+EANS+++T+IQFYAIELARN+EG N IR +K Sbjct: 7 VTADQLLAGSSVLSRPAEEFDNDPSVEAMWAIKAMEHAEVYFNILCSVDP-KFLKLTPHDDQIYKTFRDVFPDLKVDKINEDELKSDQGKMKWRPFCEQFKGIVEDYCFGTLLRADCEGDYSEANSVLITRIQFYAIELARNREGLNDGIRKKYK 160
BLAST of upf0368 protein cxorf26 homolog vs. nr
Match: gi|1000749789|ref|XP_015597698.1| (PREDICTED: protein PBDC1 [Cephus cinctus]) HSP 1 Score: 198.749 bits (504), Expect = 1.023e-61 Identity = 96/157 (61.15%), Postives = 118/157 (75.16%), Query Frame = 0 Query: 7 GVGAAGLLAAADTLAQPAEEFGNDSRVESLWAMKAMEHAEVYFNILCSVDPLSIPRLSPCDDDIYRQFREEFPTLKVDRMTEADLKSDQAKANWRQFCDEFKH-VDDFSFATLLRLDASGDYTEANSIIVTKIQFYAIELARNKEGHNSPIRHNFKP 162 V A LLA L +PAEEF ND+ VE++WAMKA EHAE+YFNILCSVDP + RL+P DD IY+ FRE FP LKVD + E +LKS ++K WR FC+++K V+D+SF TLLRLD G+Y E NSI+V++IQFYAIELARN+EG N IR FKP Sbjct: 6 NVTADQLLAGTSVLTRPAEEFENDATVEAMWAMKAWEHAEIYFNILCSVDP-KLLRLTPHDDQIYKHFREVFPDLKVDHIDENELKSPESKNKWRPFCEQYKDIVEDYSFGTLLRLDCRGEYLEQNSILVSRIQFYAIELARNREGLNDAIREKFKP 161 The following BLAST results are available for this feature:
BLAST of upf0368 protein cxorf26 homolog vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of upf0368 protein cxorf26 homolog vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 4
BLAST of upf0368 protein cxorf26 homolog vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold886_size84816:38387..39290+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold886_size84816-snap-gene-0.27 ID=maker-scaffold886_size84816-snap-gene-0.27|Name=upf0368 protein cxorf26 homolog|organism=Tigriopus kingsejongensis|type=gene|length=904bp|location=Sequence derived from alignment at scaffold886_size84816:38387..39290+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'upf0368 protein cxorf26 homolog' has the following synonyms
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