dead deah box helicase, maker-scaffold8_size885657-snap-gene-7.3 (gene) Tigriopus kingsejongensis

Overview


Name	dead deah box helicase
Unique Name	maker-scaffold8_size885657-snap-gene-7.3
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

[Close]

BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000000846 (supercontig:LSalAtl2s:LSalAtl2s1142:195200:196664:-1 gene:EMLSAG00000000846 transcript:EMLSAT00000000846 description:"augustus_masked-LSalAtl2s1142-processed-gene-1.9")

HSP 1 Score: 209.534 bits (532), Expect = 1.031e-63
Identity = 131/368 (35.60%), Postives = 198/368 (53.80%), Query Frame = 0

Query:   11 FKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAF-----------------LIAAFTRLYNADIYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLID-FNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVAST-EVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFIEHKIPVQS 359
            F D  L + L  + E   +   + IQ E++PV L   D+IG A+TG+GKT AF                 L+   TR     I E  +KL   +  +  +  GG +  +Q  V+     I+I TPGRLID     K   L++++ L++DEADR+ ++ F  ++  +L  LP  + R NMLFSAT++  V +L    +  P  V V+S  +  DK ++  L+ P   +++  LVH+I        I+F +T     ++A  L  +   A  ++G ++QNKR   L+ F+     IL+ATDVA+RG+ I  VD VINYD+P H +DY+HR+GRTARAG SG AI+F C+    +   IE  I  K+P+ S
Sbjct:   26 FSDLGLTEVLCEACESLGWKTPSKIQKEAIPVALTGRDIIGLAETGSGKTAAFALPVLQSLLEKPQRFFALVLTPTRELAYQISEQFEKLGKSIGVKCVVLVGGMDMVSQALVLGKKPHIIIATPGRLIDHMENTKGFDLRSLKYLIMDEADRILNMDFEIEVDKILSALPRGEGRKNMLFSATMTKKVAKLQRASLRDPVRVEVSSKYQTVDKLLQYYLFIPLKYKEM-YLVHIINELAGNSFIIFSSTCSGTLKLALLLRNLGFTAIPLNGQMSQNKRLASLNKFKNKSRSILIATDVASRGLDIPHVDVVINYDIPTHSKDYIHRVGRTARAGRSGRAITFVCQYDVELYQRIETLIGKKLPLYS 392

[Close]

BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000010143 (supercontig:LSalAtl2s:LSalAtl2s66:712270:714003:-1 gene:EMLSAG00000010143 transcript:EMLSAT00000010143 description:"augustus_masked-LSalAtl2s66-processed-gene-7.1")

HSP 1 Score: 204.912 bits (520), Expect = 1.324e-61
Identity = 125/341 (36.66%), Postives = 189/341 (55.43%), Query Frame = 0

Query:   21 LNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAFTRLYNADIYEDAK--------KLNTELNYRIA--------------LAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIR-FLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVED-KRIEEKLYFPASDEKLP--LLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISF 335
            + ++++  F + +PIQ ++ P  L+  D+IG AQTGTGKT+AFL+ +F  + +  I  + +            EL  +IA                YGG + KAQ +V+  GV IVI TPGRL D  +   + +++I  LVLDEADRM D+GF   IR  LL   PD   R  ++ SAT    V  LA  +M  P  V++ S ++     + +K++   S+E+    LL      T   + I+F++ K   +  + +L     +   I G   Q  RE+ L DF+ G ++IL+ATDVA+RGI ++D+ +VIN+D PN +E+YVHRIGR+ RAG  G +ISF
Sbjct:    1 MTAIQKRGFKNPSPIQCQAWPYLLKGLDLIGIAQTGTGKTLAFLLPSFIHIDSQSIPREKRGGPNVLVLSPTRELALQIADEVKKYEYRGIKSVCVYGGGDRKAQVKVVTQGVQIVIATPGRLNDLIESGCIAVESITYLVLDEADRMLDMGFEPQIRKILLDVRPD---RQTVMTSATWPPGVRRLASNYMKDPITVSIGSLDLAAVHSVTQKIFVVESEEEKDDRLLDFFNNMTPEDKAIIFMSKKAKVDDYSSSLCLAGVDCQSIHGGRDQMDREQALLDFKLGHVRILIATDVASRGIDVEDISHVINFDFPNSMEEYVHRIGRSGRAGKKGSSISF 338

[Close]

BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000004918 (supercontig:LSalAtl2s:LSalAtl2s259:1039310:1040989:-1 gene:EMLSAG00000004918 transcript:EMLSAT00000004918 description:"maker-LSalAtl2s259-augustus-gene-10.16")

HSP 1 Score: 204.912 bits (520), Expect = 1.935e-61
Identity = 128/340 (37.65%), Postives = 190/340 (55.88%), Query Frame = 0

Query:   28 NFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAF-------------------------LIAAFTR---LYNADIYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKR----IEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISF 335
            +F   TPIQ+ + PV     DVIG A+TG+GKT+AF                         LI A TR   + +  + E A K   E+ ++    YGG N  AQ++ +++GV+I++ TPGRL+D  ++  + L  +  +VLDEADRM D GF +DIR +L +    KER   LFSAT    + +LA+E + SP  V + S ++   +    I E +   + D K+  L++     +  R ++F+  K   +R+  +L     N   I GD +Q+ R + +++F+ G I IL+ATDVAARG+ I DV+YV+NY  P  +EDYVHRIGRT RAG SG A +F
Sbjct:  127 SFKAPTPIQSMTWPVVASGRDVIGIAETGSGKTLAFSVPALAHISERKQRPVKGVNSMPIMLIVAPTRELAMQSQVVLESAGK---EIGFKSLCVYGGVNKYAQRQSLKSGVEILVATPGRLLDLAEEGCVDLSGVSYVVLDEADRMLDQGFEQDIRRILGQT--HKERQTCLFSATWPDSIRKLAHEFLKSPIKVTIGSEDLAAGKTVTQIVEVVDERSRDGKIKGLLNKYHKKK-NRILIFVLYKREADRLWNSL-KHEWNCTTIHGDKSQDARIQAVENFKSGKIPILIATDVAARGLDIPDVEYVLNYSFPLTIEDYVHRIGRTGRAGKSGIAHTF 459

[Close]

BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000008048 (supercontig:LSalAtl2s:LSalAtl2s479:213954:217803:1 gene:EMLSAG00000008048 transcript:EMLSAT00000008048 description:"maker-LSalAtl2s479-augustus-gene-2.18")

HSP 1 Score: 208.379 bits (529), Expect = 3.900e-61
Identity = 130/392 (33.16%), Postives = 196/392 (50.00%), Query Frame = 0

Query:    9 KQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFL--------------------------IAAFTRLYNADIYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLP-----------------------DAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFI 351
            +++K+  L   +L  +E+  ++  TPIQ +++P+ L+N D+IG A+TG+GKT AFL                          I A TR     I E+       L        GG + + Q   +  G +IVI TPGRLID  + + L L     +VLDEADRM D+GF  D++ +L  +P                         K R  ++F+AT+   VE LA  ++  P  V + S     +R+E+ +Y    ++K   L+ ++ +      I+F+N K   +++AQ L  M +NA  + G   Q +RE  L   + G+  ILVATDVA RGI I +V  VINYD+   +E Y HRIGRT RAG SG AISF  +  S +  D+++ +
Sbjct:  324 RKWKEACLSPEILEIIEKVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTCAFLLPLLVWIQSLPKTTRMEDQDQGPYAIIMAPTRELAQQIEEECNTFGGPLGIXTVAVIGGLSREDQGFKLRLGCEIVIATPGRLIDVLENRYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDNDEAENEAALLENIRSKNKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSIGRPVERVEQVVYMMKENDKRNKLISILNNGIEPPIIIFVNQKKGADKLAQGLEKMGYNAATLHGGKGQEQREYALSGLKAGNKDILVATDVAGRGIDIKNVSLVINYDMAKSIEPYTHRIGRTGRAGKSGKAISFCTQEDSPLFYDLKQML 715

[Close]

BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000000395 (supercontig:LSalAtl2s:LSalAtl2s1063:103535:105763:1 gene:EMLSAG00000000395 transcript:EMLSAT00000000395 description:"augustus_masked-LSalAtl2s1063-processed-gene-0.12")

HSP 1 Score: 206.453 bits (524), Expect = 1.711e-60
Identity = 132/383 (34.46%), Postives = 206/383 (53.79%), Query Frame = 0

Query:    8 NKQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAFTRLY-------------------NADIYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQK-LLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEE---KLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFIEHKIPVQSIDSDAIAK 367
            N  F    L +PLL ++E   + H TPIQA ++PV L   DV G A TGTGKT  +++    RL                       +Y+ +K+L+   +  IAL+ GG + KAQ+  +    DIVI TPGRLID  K      L+NIEVL+LDEADRM D  FL+ ++ +++    + +R  +LFSAT++  V +L+   +  P  + V S +V    + +   ++      ++  +L  L+  T     IVFI TK    R+   L  +    G + G+++Q +R + L  F++ +I +L+ TDVAARG+ I  V  VINY LP  +E Y+HR+GRTARAG +G ++S A E    ++ +I +     +  +++  D I+K
Sbjct:  181 NASFYAMXLSRPLLKAIEXLRYVHPTPIQASTIPVALAGRDVCGCAATGTGKTAXYMLPILERLLFRPNQSITRVIVLVPTRELGVQVYQVSKQLSQFTSIDIALSVGGLDLKAQELALRKNPDIVIATPGRLIDHIKNTPTFGLENIEVLILDEADRMLDECFLEQMKEIVKSC--SPKRQTLLFSATMTDKVNDLSTMALRKPVKIFVDSNKVVAWNLRQEFVRIRANRESDREGILAALVCRTFRDHTIVFIQTKVQCHRLLILLSLLGVRVGELHGNLSQPQRLESLKKFKEEEIDVLITTDVAARGLDISGVKTVINYTLPTTLEHYIHRVGRTARAGRAGRSVSIAGEGDRKMVREIVKNARDPVKARTVPQDIISK 561

[Close]

BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000011452 (supercontig:LSalAtl2s:LSalAtl2s790:154718:161369:1 gene:EMLSAG00000011452 transcript:EMLSAT00000011452 description:"maker-LSalAtl2s790-augustus-gene-1.30")

HSP 1 Score: 202.216 bits (513), Expect = 8.445e-59
Identity = 127/353 (35.98%), Postives = 179/353 (50.71%), Query Frame = 0

Query:   11 FKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFL----------------------IAAFTRLYNADIYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRL-PDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEE--KLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACE 338
            F  F   + LL S+ +S F+  TPIQ+  +PV L   D IG A+TG+GKT  FL                      I   TR     IY +AKK     +     AYGG +   Q +  E+G +I I TPGR+ID  K K+  LQ +  LVLDEADRMFD+GF   +R +   + PD   R  +LFSAT    VE+LA + +  P  V   S     + + +  K+      +   +L +L+E T     ++F+  K   E +AQ L        +I GD+ Q+ R +++  F+K    ILVATDVAARG+ I  +  V+NYD+   ++ + HRIGRT RAG  G A +   E
Sbjct:  278 FGHFGFDEVLLKSIRKSEFTQPTPIQSIGIPVCLSGRDAIGIAKTGSGKTATFLWPIIIHIQHQRPLLNGEGPIALILVPTRELALQIYTEAKKFGKVYDLNAVCAYGGGSKWEQSKCFESGAEIAIATPGRMIDMIKMKVTNLQRVTYLVLDEADRMFDMGFEAQVRSICDHVRPD---RQTLLFSATFKKKVEKLARDVLTDPIKVVQGSIGEASEDVTQIVKVLEKGGYKWEWVLQNLVEFTSAGSVLIFVTKKLNCEELAQNLKLKEFECELIHGDLNQHVRNEIIYKFKKKQFPILVATDVAARGLDIPHIRTVLNYDIARDIDTHTHRIGRTGRAGIKGTAYTLVTE 627

[Close]

BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000005110 (supercontig:LSalAtl2s:LSalAtl2s26:913218:916036:-1 gene:EMLSAG00000005110 transcript:EMLSAT00000005110 description:"maker-LSalAtl2s26-augustus-gene-8.40")

HSP 1 Score: 195.667 bits (496), Expect = 4.812e-57
Identity = 121/384 (31.51%), Postives = 195/384 (50.78%), Query Frame = 0

Query:   11 FKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAFTRLYNA-------------------------------DIYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRR--LPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRG----------IVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFI 351
            F D  + + + N+++ +N+S  TP+Q  ++P      D++  AQTG+GKT AFL+    R++                                  I+++AKK       +  + YGG N   Q   ++ G  +++ TPGRL+D   +  + L+  + LVLDEADRM D+GF   IR ++    +P A +R  ++FSAT   +++ LA + + +   +AV       + I +K+ +    +K   L+ L+E+  + +G          +VF+ T+   +++ + L         I GD  Q +RE  L  FR G+  ILVAT VAARG+ I +V +VIN+DLP+ VE+YVHRIGRT R G  G A SF  +    +  D+ E I
Sbjct:  182 FMDINMAEIMANNIKLANYSKPTPVQKHAIPAITNGRDLMACAQTGSGKTAAFLVPILNRIFEGGPPQPAPHSKNKRSKQYPMALILAPTRELATQIFDEAKKFAYRSLVQPCVVYGGANVFEQMMDLDRGCHLLVATPGRLVDMLDRGKISLEQCKYLVLDEADRMLDMGFEPQIRKIVENDNMPPAGQRQTLMFSATFPKEIQMLARDFLANYIFLAVGRVGSTSENITQKIVWVDELDKRSFLLDLLEAAGLAKGPAGNEDSSLTLVFVETRKGADQLDEYLYKEGFPVTSIHGDRTQREREDALRRFRSGNTPILVATAVAARGLDIPNVKHVINFDLPSDVEEYVHRIGRTGRMGNLGLATSFFNDRNRNLTKDLVELI 565

[Close]

BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000001805 (supercontig:LSalAtl2s:LSalAtl2s1306:97666:99668:-1 gene:EMLSAG00000001805 transcript:EMLSAT00000001805 description:"maker-LSalAtl2s1306-augustus-gene-0.42")

HSP 1 Score: 190.274 bits (482), Expect = 2.762e-55
Identity = 119/356 (33.43%), Postives = 190/356 (53.37%), Query Frame = 0

Query:   11 FKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFL-------------------------IAAFTRLYNADIYEDAKKLNTELNYRIALAYGGNNYKAQQEVI-EAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRR--LPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQ---RGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISF 335
            F+D P    L +++ + +++  TP+Q  ++P+ L  +D+I  AQTG+GKT  FL                         I   TR     I ++A+K   ++N    + YGG++ ++ + ++    VDI+  TPGRLID   ++ +  +NIE LV+DEADRM ++GF + I  ++    +P   +R  +LFSAT   +++ LA E++     + V       + IE+ +      EK+  L+  ++  E+    + ++F   K   + +A  L    H A  I GD  Q +RE+ L DF++G   ILVAT+VA+RG+ I  V  VINYDLP  +  YVHRIGR+ R G SG +ISF
Sbjct:  166 FRDTPFTSILQDNIARCSYTRPTPVQKHAVPIILMKHDLISCAQTGSGKTAXFLLPIIHSLHKKRISSNSSDKATPRTLILGPTRELVVQINDEARKYCAKMNIDCRVIYGGSSTESSKYILLNNRVDILSATPGRLIDMLGKEHISFENIEFLVIDEADRMLEMGFRESIDEVVNHFTMPGTTKRQTLLFSATFPPEIQILASEYLKDYLFLKVGVVGGASEDIEQVIVQVKDYEKMTKLLETLKENEVNPETKILIFARKKRGVDFLATRLCLDKHPATSIHGDRFQEQREEALRDFKRGSKPILVATEVASRGLDIPKVSLVINYDLPQDISTYVHRIGRSGRVGNSGKSISF 521

[Close]

BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000011390 (supercontig:LSalAtl2s:LSalAtl2s787:174367:180499:1 gene:EMLSAG00000011390 transcript:EMLSAT00000011390 description:"augustus_masked-LSalAtl2s787-processed-gene-0.30")

HSP 1 Score: 193.356 bits (490), Expect = 3.597e-55
Identity = 119/356 (33.43%), Postives = 190/356 (53.37%), Query Frame = 0

Query:    9 KQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAF----------------------TRLYNADIYEDAKKLNTEL-NYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDF---NKQKLLKLQNIEVLVLDEADRMFDLGFLKDI-RFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEK-LPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNH-NAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISF 335
            K +    + Q +L+ L+++ +   TPIQ +++P+ +   D+IG A+TG+GKT+AFL+  F                      TR     I ++ KK +  +   R    YGG     Q   ++ G +I++ TPGR+ID    N  ++   + I  +VLDEADRMFD+GF   + R +    PD   +  ++FSAT    +E LA   +  P  V V    V  K I++ +Y    + K L LL  L + +     I+F++ +   + + + L++ ++ +   + G V Q  R+ ++ +F+ G +KILVAT VAARG+ + ++  V+NYD PNH EDYVHR GRT RAG SG A +F
Sbjct:  222 KNWTHAGVSQRILDLLKRNGYEKPTPIQTQAIPIIMSGRDMIGIAKTGSGKTLAFLLPLFRHIMAQPELEEGDGPIAIIMTPTRELCMQIGKEIKKFSKAIKGARSVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNCRRITYVVLDEADRMFDMGFEPQVSRIIDNCRPD---KQMVMFSATFPRQMEALARRILCKPVEVTVGGRSVVCKDIDQSVYVLEEEHKFLKLLELLGQRSSEGLIIIFVDKQEHADSLLKDLMSASYTSCASLHGGVDQYDRDSIITNFKNGKVKILVATSVAARGLDVKELVLVVNYDCPNHYEDYVHRCGRTGRAGNSGFAATF 574

[Close]

BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000002581 (supercontig:LSalAtl2s:LSalAtl2s151:1305107:1306803:-1 gene:EMLSAG00000002581 transcript:EMLSAT00000002581 description:"maker-LSalAtl2s151-snap-gene-13.39")

HSP 1 Score: 187.963 bits (476), Expect = 4.011e-55
Identity = 118/353 (33.43%), Postives = 186/353 (52.69%), Query Frame = 0

Query:   11 FKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAFTRLYN----------------ADIYEDAKKLNTELN-----YRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRL-PDAKERLNMLFSATVSYDVEELAYEHMNSP--TNVAVASTEVE-DKRIEEKLYFPASDEKLPLLVHLIES---TEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISF 335
            F++   P  L+  ++   F   T IQA+  P+     ++I   +TG+GKT+ F++     L                  A   E A++++  ++        A   GGN+ + Q   +  G +IV+ TPGRLID  +   + L+    +VLDEADRM D+GF   IR ++R++ PD   R  +++SAT   +V+ LA++        +V + S+E+  +K I +   F    EK+  +  ++ES    E ++ ++F  TK   +++ + L   N     I GD  Q  R + LD FR G I ILVATDVA+RG+ ++D+  VINYD PN++EDYVHRIGRT R    G + SF
Sbjct:   80 FQETGFPLGLIERIKSHGFEAPTAIQAQGWPIATNGKNIIAIGETGSGKTLGFVLPGLCHLMRXPPRRNRGDGPVVLIIAPTRELAEQIHNVVDGFASKIPTACLVGGNHKQGQIRDLNRGAEIVVATPGRLIDLMEDGDVDLKRCSYMVLDEADRMLDMGFEPQIRKIMRQVRPD---RQLLMWSATWPSEVQSLAHDFFGGTDYAHVNIGSSELXANKLIMQDFKFCERFEKMDSIKEILESLSEVESKKVLIFAATKIRVDQLVRKLKYWNFVVDGIHGDKTQAMRTRALDKFRSGRINILVATDVASRGLDVNDIKVVINYDFPNNIEDYVHRIGRTGRCSKEGKSFSF 429

[Close]

BLAST of dead deah box helicase vs. SwissProt
Match: gi|189040044|sp|A8GZJ0.1|RHLB_SHEPA (RecName: Full=ATP-dependent RNA helicase RhlB)

HSP 1 Score: 416.001 bits (1068), Expect = 4.415e-143
Identity = 201/389 (51.67%), Postives = 265/389 (68.12%), Query Frame = 0

Query:    1 MSNNHLTNKQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAF------------------------TRLYNADIYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFIEHKIPVQSIDSDAI 365
            MS  HL+ ++F DFPL + +  +L ++ F  CTPIQA SLP+ LE  D+ GQAQTGTGKT+AFL+A F                        TR     I +DA  L      ++ + YGG  Y+ Q++V++ GVDI+IGT GR+ID+ +Q ++ +  I+ +VLDEADRMFDLGF+KDIRFL RR+PDAK RLNMLFSAT+S  V+ELAY+HMN P  V +A  E   K I+E++++P+ +EK+PLL+ L+E    ++ IVF NTKH  E+V   L    H AG+++GDV Q KR ++L+ F KGDI ILVATDVAARG+HI DV +V NYDLP+  EDYVHRIGRT RAG  G ++SFACE Y+  LP IE +I+H IPV S DSDA+
Sbjct:    1 MSETHLSTQKFADFPLHKEVHQALNEAGFEFCTPIQALSLPILLEKKDIAGQAQTGTGKTLAFLVATFNHLLSTPIPAERQLNQPRAIIMAPTRELAIQIAKDANLLAKHTGLKVGIVYGGEGYEVQRKVLDKGVDILIGTTGRIIDYVRQGVINVSCIQAVVLDEADRMFDLGFIKDIRFLFRRMPDAKSRLNMLFSATLSMKVQELAYDHMNEPEKVEIAPNEKTSKNIKEEIFYPSMEEKMPLLLSLLEEDWPEKAIVFSNTKHSCEKVWSWLEGDGHRAGLLTGDVPQKKRLRILEQFTKGDIDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGVSVSFACEEYALNLPAIESYIQHSIPVTSYDSDAL 389

[Close]

BLAST of dead deah box helicase vs. SwissProt
Match: gi|189040042|sp|B0TJ29.1|RHLB_SHEHH (RecName: Full=ATP-dependent RNA helicase RhlB)

HSP 1 Score: 413.69 bits (1062), Expect = 3.247e-142
Identity = 200/389 (51.41%), Postives = 266/389 (68.38%), Query Frame = 0

Query:    1 MSNNHLTNKQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAF------------------------TRLYNADIYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFIEHKIPVQSIDSDAI 365
            MS+ HL+ ++F DFPL + +  +L ++ F  CTPIQA SLP+ LE  D+ GQAQTGTGKT+AFL+A F                        TR     I +DA  L      ++ + YGG  Y+ Q++V++ GVDI+IGT GR+ID+ +Q ++ +  I+ +VLDEADRMFDLGF+KDIRFL RR+PDAK RLNMLFSAT+S  V+ELAY+HMN P  V +A  E   K I+E++++P+ +EK+PLL+ L+E    ++ IVF NTKH  E+V   L    H AG+++GDV Q KR ++L+ F KG+I ILVATDVAARG+HI DV +V NYDLP+  EDYVHRIGRT RAG  G ++SFACE Y+  LP IE +I+H IPV S DSDA+
Sbjct:    1 MSDTHLSTQKFADFPLHKEVHQALNEAGFEFCTPIQALSLPILLEKKDIAGQAQTGTGKTLAFLVATFNHLLSTPIPAERQLNQPRAIIMAPTRELAIQIAKDANLLAKHTGLKVGIVYGGEGYEVQRKVLDKGVDILIGTTGRIIDYVRQGVINVSCIQAVVLDEADRMFDLGFIKDIRFLFRRMPDAKSRLNMLFSATLSMKVQELAYDHMNEPEKVEIAPNEKTSKNIKEEIFYPSMEEKMPLLLSLLEEDWPEKAIVFSNTKHSCEKVWSWLEGDGHRAGLLTGDVPQKKRLRILEQFTKGEIDILVATDVAARGLHIADVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGISVSFACEEYALNLPAIESYIQHSIPVTSYDSDAL 389

[Close]

BLAST of dead deah box helicase vs. SwissProt
Match: gi|32363280|sp|Q87KH5.1|RHLB_VIBPA (RecName: Full=ATP-dependent RNA helicase RhlB)

HSP 1 Score: 413.305 bits (1061), Expect = 4.506e-142
Identity = 206/389 (52.96%), Postives = 260/389 (66.84%), Query Frame = 0

Query:    1 MSNNHLTNKQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAF------------------------TRLYNADIYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFIEHKIPVQSIDSDAI 365
            M   H+T ++F D  L   +   LE+  F +CTPIQA +LPV L   D+ GQAQTGTGKT+AFL A F                        TR     I+ DA+ L      + ALAYGG +Y  Q   ++ GVDI+IGT GR+IDF KQ++  L NI+ +VLDEADRMFDLGF+KDIRFL RR+P+ KERLNMLFSAT+SY V+ELA+EHM++P +V V   +    RI+E+L++P++++K+ LL  LIE     R IVF NTKH  E V   L A  H  G+++GDV Q KREK+L+ F KGD+ ILVATDVAARG+HI  V +V NYDLP+  EDYVHRIGRT RAGASGH+ISFACE Y+  LP IEE+IEH IPV   D+ A+
Sbjct:    1 MKKTHITEQKFADLGLQPQVTEGLEKKGFEYCTPIQALALPVLLTGQDIAGQAQTGTGKTLAFLTATFNHLLTTPEHEGRQPTQPRAIIMAPTRELAIQIFNDAEPLIASTGLKAALAYGGESYDKQLAKLQDGVDILIGTTGRIIDFYKQRVFNLNNIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPKERLNMLFSATLSYRVQELAFEHMHNPEHVVVEPAQKTGHRIQEELFYPSNEDKMALLQTLIEEEWPDRAIVFANTKHKCESVWGHLAADGHRVGLLTGDVPQKKREKILEQFTKGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEEYAINLPAIEEYIEHTIPVSEYDASAL 389

[Close]

BLAST of dead deah box helicase vs. SwissProt
Match: gi|32363416|sp|Q9KV52.1|RHLB_VIBCH (RecName: Full=ATP-dependent RNA helicase RhlB >gi|189040085|sp|A5F3R4.1|RHLB_VIBC3 RecName: Full=ATP-dependent RNA helicase RhlB >gi|254797692|sp|C3LQR1.1|RHLB_VIBCM RecName: Full=ATP-dependent RNA helicase RhlB)

HSP 1 Score: 410.223 bits (1053), Expect = 8.937e-141
Identity = 201/389 (51.67%), Postives = 261/389 (67.10%), Query Frame = 0

Query:    1 MSNNHLTNKQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAF------------------------TRLYNADIYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFIEHKIPVQSIDSDAI 365
            M   H+T  +F DF L   +++ LE+  F +CTPIQA +LPV L   D+ GQAQTGTGKT+AFL A F                        TR     I+ DA+ L      + ALAYGG +Y  Q   +++GVDI+IGT GR+IDF KQ++  L +I+ +VLDEADRMFDLGF+KDIRFL RR+P+ K+RLNMLFSAT+SY V+ELA+EHMN+P +V V   +    RI+E+L++P+++ K+ LL  LIE     R I+F NTKH  E++   L A NH  G+++GDV Q KRE++L+ F +GD+ ILVATDVAARG+HI  V +V NYDLP+  EDYVHRIGRT RAGASGH+ISFACE Y+  LP IE +IEH IP    D  A+
Sbjct:    1 MKKTHITEHKFADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNHLLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQLAKLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPKDRLNMLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPSNEHKMALLQTLIEEEWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEEYAINLPAIESYIEHAIPTSDYDPSAL 389

[Close]

BLAST of dead deah box helicase vs. SwissProt
Match: gi|226739551|sp|B8CHZ1.1|RHLB_SHEPW (RecName: Full=ATP-dependent RNA helicase RhlB)

HSP 1 Score: 408.683 bits (1049), Expect = 2.745e-140
Identity = 197/389 (50.64%), Postives = 262/389 (67.35%), Query Frame = 0

Query:    1 MSNNHLTNKQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAF------------------------TRLYNADIYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFIEHKIPVQSIDSDAI 365
            MS  HL+ K+F DFPL + +  +L +  F  CTPIQA SLP+ L   D+ GQAQTGTGKT+AFL+A F                        TR     I +DA  L      ++ + YGG  Y+AQ++V++ G+DI+IGT GR+ID+ +Q ++ +  I+ +VLDEADRMFDLGF+KDIRFL RR+PDAK RLNMLFSAT+S  V+ELAY+HMN P  V +A  E   K I+E++++P+ +EK+PLL+ L+E    ++ IVF NTKH  E+V   L    H  G+++GDV Q KR ++L+ F  GDI +LVATDVAARG+HI DV +V NYDLP+  EDYVHRIGRT RAG  G ++SFACE Y+  LP IE +I+H IPV S DS+A+
Sbjct:    1 MSETHLSTKKFADFPLHKEVQQALNEVGFEFCTPIQALSLPILLAKKDIAGQAQTGTGKTLAFLVATFNHLLTEAAPTERKINQPRAIIMAPTRELAIQIAKDANLLAKHTGLKVGIVYGGEGYEAQRKVLDKGIDILIGTTGRIIDYVRQGVIDVSAIQAVVLDEADRMFDLGFIKDIRFLFRRMPDAKSRLNMLFSATLSMKVQELAYDHMNEPEKVEIAPNEKTSKNIKEEIFYPSMEEKMPLLLSLLEEDWPEKAIVFSNTKHSCEKVWSWLEGDGHRVGLLTGDVPQKKRLRILEQFTSGDIDVLVATDVAARGLHIADVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGVSVSFACEEYALNLPAIESYIQHSIPVTSYDSEAL 389

[Close]

BLAST of dead deah box helicase vs. SwissProt
Match: gi|189040086|sp|A7MXT4.1|RHLB_VIBCB (RecName: Full=ATP-dependent RNA helicase RhlB)

HSP 1 Score: 406.371 bits (1043), Expect = 2.324e-139
Identity = 201/389 (51.67%), Postives = 259/389 (66.58%), Query Frame = 0

Query:    1 MSNNHLTNKQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAF------------------------TRLYNADIYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFIEHKIPVQSIDSDAI 365
            M   H+T ++F D  L   +   LE+  F +CTPIQA +LPV L   D+ GQAQTGTGKT+AFL A F                        TR     I+ DA  L      + ALAYGG +Y  Q   ++ GVDI+IGT GR+IDF KQ++  L NI+ +VLDEADRMFDLGF+KDIRFL RR+P+ KERLNMLFSAT+SY V+ELA+EHM++P +V V   +    RI+E+L++P++++K+ LL  LIE     R IVF NTKH  E +   L A  H  G+++GDV Q KREK+L+ F +G++ +LVATDVAARG+HI  V +V N+DLP+  EDYVHRIGRT RAGASGH+ISFACE Y+  LP IEE+IEH IPV   D+ A+
Sbjct:    1 MKKTHITEQKFADLGLKPQVTEGLEKKGFEYCTPIQALALPVLLTGQDIAGQAQTGTGKTLAFLTATFNHLLTTPEHEGRKPTQPRAIIMAPTRELAIQIFNDAAPLIASTGLKAALAYGGESYDKQLAKLQDGVDILIGTTGRIIDFYKQRVFNLNNIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPKERLNMLFSATLSYRVQELAFEHMHNPEHVVVEPEQKTGHRIQEELFYPSNEDKMALLQTLIEEEWPDRAIVFANTKHKCESIWGHLAADGHRVGLLTGDVPQKKREKILEQFTRGEVDLLVATDVAARGLHIPQVTHVFNFDLPDDCEDYVHRIGRTGRAGASGHSISFACEDYAINLPPIEEYIEHAIPVSDYDASAL 389

[Close]

BLAST of dead deah box helicase vs. SwissProt
Match: gi|32363316|sp|Q8DDN6.1|RHLB_VIBVU (RecName: Full=ATP-dependent RNA helicase RhlB)

HSP 1 Score: 404.445 bits (1038), Expect = 1.178e-138
Identity = 203/401 (50.62%), Postives = 262/401 (65.34%), Query Frame = 0

Query:    1 MSNNHLTNKQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAF------------------------TRLYNADIYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFIEHKIPVQSIDSDAI-----AKITIPS 372
            M   H+T ++F D  L   ++  LE+  F  CTPIQA +LPV L   D+ GQAQTGTGKT+AFL A F                        TR     IY DA+ L      + ALAYGG +Y  Q   ++ GVD++IGT GR+IDF KQ++  L NI+ +VLDEADRMFDLGF+KDIRFL RR+P  +ERLNMLFSAT+SY V+ELA+EHM++P +V V   +    RI+E+L++P++++K+ LL  LIE     R I+F NTK+  E +   L A  H  G+++GDV Q KREK+L+ F +G + +LVATDVAARG+HI  V +V NYDLP+  EDYVHRIGRT RAGASGH+ISFACE Y+  LP IEE+IEH IPV   DS A+     A +  PS
Sbjct:    1 MKKTHITEQKFADLGLNPQVVEGLEKKGFEFCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNHLLTTPAHEGRQPTQPRAIIMAPTRELAIQIYNDAEPLIASTGIKAALAYGGESYDKQLTKLQGGVDVLIGTTGRIIDFYKQRVFNLNNIQAVVLDEADRMFDLGFIKDIRFLFRRMPAPQERLNMLFSATLSYRVQELAFEHMHNPEHVVVEPEQKTGHRIQEELFYPSNEDKMALLQTLIEEEWPDRAIIFANTKYKCESIWAHLAADGHRVGLLTGDVPQKKREKILEQFTQGSVDLLVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEDYAINLPAIEEYIEHTIPVSDYDSSALIQDLPAPVRTPS 401

[Close]

BLAST of dead deah box helicase vs. SwissProt
Match: gi|39931700|sp|Q7MGP7.1|RHLB_VIBVY (RecName: Full=ATP-dependent RNA helicase RhlB)

HSP 1 Score: 404.445 bits (1038), Expect = 1.530e-138
Identity = 203/401 (50.62%), Postives = 262/401 (65.34%), Query Frame = 0

Query:    1 MSNNHLTNKQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAF------------------------TRLYNADIYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFIEHKIPVQSIDSDAI-----AKITIPS 372
            M   H+T ++F D  L   ++  LE+  F  CTPIQA +LPV L   D+ GQAQTGTGKT+AFL A F                        TR     IY DA+ L      + ALAYGG +Y  Q   ++ GVD++IGT GR+IDF KQ++  L NI+ +VLDEADRMFDLGF+KDIRFL RR+P  +ERLNMLFSAT+SY V+ELA+EHM++P +V V   +    RI+E+L++P++++K+ LL  LIE     R I+F NTK+  E +   L A  H  G+++GDV Q KREK+L+ F +G + +LVATDVAARG+HI  V +V NYDLP+  EDYVHRIGRT RAGASGH+ISFACE Y+  LP IEE+IEH IPV   DS A+     A +  PS
Sbjct:    1 MKKTHITEQKFADLGLNPQVVEGLEKKGFEFCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNHLLTTHAHEGRQPTQPRAIIMAPTRELAIQIYNDAEPLIASTGIKAALAYGGESYDKQLAKLQGGVDVLIGTTGRIIDFYKQRVFNLNNIQAVVLDEADRMFDLGFIKDIRFLFRRMPAPQERLNMLFSATLSYRVQELAFEHMHNPEHVVVEPEQKTGHRIQEELFYPSNEDKMALLQTLIEEEWPDRAIIFANTKYKCESIWAHLAADGHRVGLLTGDVPQKKREKILEQFTQGSVDLLVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEDYAINLPAIEEYIEHTIPVSDYDSSALIQDLPAPVRTPS 401

[Close]

BLAST of dead deah box helicase vs. SwissProt
Match: gi|122300890|sp|Q088J2.1|RHLB_SHEFN (RecName: Full=ATP-dependent RNA helicase RhlB)

HSP 1 Score: 404.06 bits (1037), Expect = 2.097e-138
Identity = 196/389 (50.39%), Postives = 260/389 (66.84%), Query Frame = 0

Query:    1 MSNNHLTNKQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAFTRLYNA------------------------DIYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFIEHKIPVQSIDSDAI 365
            MS  HL+ K+F DFPL   +L +L ++ F  CTPIQA SLP+ L   D+ GQAQTGTGKT+AFL+A F  L N                          I +DAK L      ++ + YGG +Y+ Q+ V++ GVDI+IGT GR+ID+ +Q ++ L +I+ +VLDEADRMFDLGF+KDIRFL RR+PDAK RLNMLFSAT+S  V+ELAY+HMN P  V +   E   K I+E++++P+ ++K+ LL+ LIE     + IVF NTKH  E++   L    H  G+++GDV Q KR ++L+ F  G+I +LVATDVAARG+HI DV +V NYDLP+  EDYVHRIGRT RAG  G +ISFACE Y+  LP+IE +I H IPV + D DA+
Sbjct:    1 MSQTHLSTKKFADFPLKPEILAALNENGFEFCTPIQALSLPILLNAKDIAGQAQTGTGKTMAFLVATFNHLLNVAAPESRKATEPRAIIMAPTRELAIQIAKDAKLLAAHTGLKVGIVYGGESYETQRAVLDKGVDILIGTTGRIIDYVRQGVISLSHIQAVVLDEADRMFDLGFIKDIRFLFRRMPDAKSRLNMLFSATLSMKVQELAYDHMNDPEKVEIEPLEKTSKNIKEEIFYPSMEDKMRLLLSLIEEDWPDKAIVFSNTKHSCEKLWSYLEGDGHRVGLLTGDVPQKKRIRILEQFTSGEIDVLVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGISISFACEEYALNLPEIETYINHSIPVSNYDKDAL 389

[Close]

BLAST of dead deah box helicase vs. SwissProt
Match: gi|67461243|sp|Q5GUR8.2|RHLB_XANOR (RecName: Full=ATP-dependent RNA helicase RhlB)

HSP 1 Score: 408.683 bits (1049), Expect = 2.442e-138
Identity = 206/393 (52.42%), Postives = 263/393 (66.92%), Query Frame = 0

Query:    1 MSNNHLTNKQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAFTRLYN----AD--------------------IYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQ-KLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFIEHKIPVQSIDSDAIAKI 368
            MS+  LT+  F  F L   L+  LE + F+ CTPIQA +LPV L   DV GQAQTGTGKT+AFL+A   RL N    AD                    I++DA K   +L  R AL YGG +Y  Q+E+++ GVD++I TPGRLID+ KQ K++ L   E+ VLDEADRMFDLGF+KDIRFLLRR+P+   R  +LFSAT+S+ V ELAYEHMN P  + V +  +   R+ +++YFP+ DEK  LL+ L+  +E  R +VF+NTK   ERVA+TL    +  G++SGDV Q KRE LL+ F+KG ++ILVATDVAARG+HID V YV NYDLP   EDYVHRIGRTAR G  G AISFACE Y+  LPDIE +IE KIPV+ + S+ +  +
Sbjct:    1 MSDKPLTDVTFSSFDLHPALVAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLNRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDIRFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETETITAARVRQRIYFPSDDEKQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSLPDIEAYIEQKIPVEPVTSELLTPL 393

[Close]

BLAST of dead deah box helicase vs. nr
Match: gi|1000078450|gb|KXJ46941.1| (RNA helicase [Cycloclasticus sp. Phe_18])

HSP 1 Score: 423.32 bits (1087), Expect = 1.076e-143
Identity = 203/390 (52.05%), Postives = 272/390 (69.74%), Query Frame = 0

Query:    1 MSNNHLTNKQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAF----------------------TRLYNADIYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFIEHKIPVQSIDSDAIAKI 368
            MS+ HLTN +F    L +PL+  L ++NF  CTPIQ ++LP++L   DV GQAQTGTGKTIAFL+A +                      TR     I  DAK +    + ++ LAYGG +Y+ Q++ IE GVDI+IGTPGR IDF KQK+  L+N+EVLVLDEADRMFDLGF+ DIR+LLRRLP  + RLN+LFSAT+S+ V ELAYEHMN+P  V +   ++  K++ E +Y+PA +EK+PLL+ ++   + +RGI+FINTKH  ER+ + L     +  ++SGDV Q KR+ +L+ F++G + +L+ATDVAARG+HI  V +V N+DLP   EDYVHRIGRTAR+GASG AISFACETY++ LPDIE +I HKIP + ID  ++  I
Sbjct:    1 MSDTHLTNTEFSSLGLTEPLIKGLNEANFLKCTPIQEQTLPISLLGRDVAGQAQTGTGKTIAFLLATYHTLLTKAAADNKTGVRALILAPTRELAIQIANDAKIIGKHTDIKVGLAYGGTDYEKQRKTIEEGVDILIGTPGRTIDFFKQKVFNLRNVEVLVLDEADRMFDLGFINDIRYLLRRLPQPENRLNLLFSATLSFKVTELAYEHMNNPEMVRIEPEQITAKQVVESVYYPADNEKIPLLIKVLMDEKPERGIIFINTKHNAERLHRYLDGNGFDNAVLSGDVPQKKRQSILNRFQEGKLPLLIATDVAARGLHIPAVSHVFNFDLPQDAEDYVHRIGRTARSGASGKAISFACETYAYSLPDIEAYISHKIPFEQIDGTSLPDI 390

[Close]

BLAST of dead deah box helicase vs. nr
Match: gi|503112332|ref|WP_013347065.1| (ATP-dependent RNA helicase RhlB [Ferrimonas balearica] >gi|307633457|gb|ADN77759.1| DEAD/DEAH box helicase domain protein [Ferrimonas balearica DSM 9799])

HSP 1 Score: 423.32 bits (1087), Expect = 1.210e-143
Identity = 203/389 (52.19%), Postives = 266/389 (68.38%), Query Frame = 0

Query:    1 MSNNHLTNKQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAF------------------------TRLYNADIYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFIEHKIPVQSIDSDAI 365
            M+  HLT  +F DFPL   ++ +LE S F+HCTPIQA +LP+ L   D+ GQAQTGTGKT+AFL+A F                        TR     I++DA+ L+     ++ LAYGG  Y +Q+  +EAGVDI+IGT GRLID+ KQ   KL  I+V+VLDEADRMFDLGF+KDIR+L RR+P   ER NMLFSAT+S+ V+ELAYEHMN P +V V   +   KRI+E+L++P++D+K+ LL+ LIE     + I+F NTKH  E +   +    H  G+++GDV Q KR K+L+ F+ G++  LVATDVAARG+HI DV +V NYDLP+  EDYVHRIGRT RAGA+GH+ISFACE Y+  LP IEE+I H+IPV S D+ A+
Sbjct:    1 MTKTHLTETKFADFPLAPQVVEALESSGFTHCTPIQALTLPIVLSGKDIAGQAQTGTGKTLAFLVATFHELLKQPAPEGHDGKSPRALIMAPTRELAIQIFKDAEPLSEATGLKLGLAYGGEGYDSQRATLEAGVDILIGTTGRLIDYYKQGTYKLNGIQVMVLDEADRMFDLGFIKDIRYLFRRMPAPAERRNMLFSATLSFKVQELAYEHMNEPEHVQVEPEQKTGKRIKEELFYPSNDDKMRLLLTLIEEDWPDKAIIFANTKHRCEDIWAWMAGDGHRVGLLTGDVPQKKRVKILEQFKAGEVDFLVATDVAARGLHIADVTHVFNYDLPDDAEDYVHRIGRTGRAGATGHSISFACEQYALNLPAIEEYIGHQIPVSSYDATAL 389

[Close]

BLAST of dead deah box helicase vs. nr
Match: gi|1270480840|gb|PHS72356.1| (ATP-dependent RNA helicase RhlB [Cycloclasticus sp.])

HSP 1 Score: 422.55 bits (1085), Expect = 1.645e-143
Identity = 205/390 (52.56%), Postives = 271/390 (69.49%), Query Frame = 0

Query:    1 MSNNHLTNKQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAF----------------------TRLYNADIYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFIEHKIPVQSIDSDAIAKI 368
            MS+ HLT+  F    L + L++ L ++ F +CTPIQ ++LP++L   DV GQAQTGTGKTIAFL+A +                      TR     IY DA  +    + R+ LAYGG +Y+ Q++ IE GVDI+IGTPGR IDF KQK+  L+  EVLVLDEADRMFDLGF+ DIRFLLRRLP+  +RLNMLFSAT+S+ V ELAYEHMN P  V +   ++  KR+EE +Y+PA DEK+PLLV ++   + +RGI+FINTK   +R+ + L   +    ++SGDV QNKR+K+L  F++G + +L+ATDVAARG+HI  V +V N+DLP   EDYVHRIGRTAR+GASG AISFACET+++ LPDIE +I HKIP +SID  ++  +
Sbjct:    1 MSSTHLTDTLFSSLGLSELLIDGLNEAGFINCTPIQEQTLPISLSGTDVAGQAQTGTGKTIAFLLATYHTLLTKPAADNPKGVRAIMLAPTRELAIQIYNDAMIIGKHTDIRVGLAYGGTDYEKQRKTIEDGVDILIGTPGRTIDFFKQKVFNLRTAEVLVLDEADRMFDLGFINDIRFLLRRLPEPDKRLNMLFSATLSFKVTELAYEHMNEPEMVRIEPEQITAKRVEESVYYPADDEKIPLLVKILNDEKPERGIIFINTKRNADRLNRYLEGNDFENAVLSGDVPQNKRQKILKQFQEGKLPLLIATDVAARGLHIPAVSHVFNFDLPQDAEDYVHRIGRTARSGASGIAISFACETFAYSLPDIEAYISHKIPFKSIDGSSLPTL 390

[Close]

BLAST of dead deah box helicase vs. nr
Match: gi|751281036|ref|WP_040989846.1| (ATP-dependent RNA helicase RhlB [Vibrio renipiscarius] >gi|749739698|gb|KII78709.1| RNA helicase [Vibrio renipiscarius] >gi|749743643|gb|KII82477.1| RNA helicase [Vibrio renipiscarius])

HSP 1 Score: 421.394 bits (1082), Expect = 8.487e-143
Identity = 205/389 (52.70%), Postives = 264/389 (67.87%), Query Frame = 0

Query:    1 MSNNHLTNKQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAF------------------------TRLYNADIYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFIEHKIPVQSIDSDAI 365
            M   H+T ++F D  L   +   LEQ  F +CTPIQA++LPV L   D+ GQAQTGTGKT+AFL A F                        TR     IY DA+ L      + ALAYGG +Y+ Q   +E GVDI+IGT GR+IDF KQ++  L NI+V+VLDEADRMFDLGF+KDIRFL RR+P+ KERLNMLFSAT+SY V+ELA+EHMN P +V V   +    RI+E+L++P++++K+PLL  +IE     R I+F NTKH+ + +   L A  H  G+++GDV Q KRE++L+ F +G++ ILVATDVAARG+HI  V +V NYDLP+  EDYVHRIGRT RAGASGH+I+FACE Y+  LP IEE+IEH IPV   DS A+
Sbjct:    1 MKKTHITEQKFADLGLKPQVTKGLEQKGFEYCTPIQAQALPVLLSGRDIAGQAQTGTGKTLAFLTATFNHLLTTPEHEGRQPTQPRAIIMAPTRELAIQIYNDAEPLIESTGLKAALAYGGESYEKQVTKLEQGVDILIGTTGRIIDFYKQRVFHLNNIQVVVLDEADRMFDLGFIKDIRFLFRRMPEPKERLNMLFSATLSYRVQELAFEHMNEPESVVVEPEQKTGHRIQEELFYPSNEDKMPLLQTIIEEEWPDRAIIFANTKHMCDSIWGHLAADKHRVGLLTGDVPQKKRERILEQFTQGEVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSITFACEQYAINLPAIEEYIEHTIPVSDYDSSAL 389

[Close]

BLAST of dead deah box helicase vs. nr
Match: gi|503916371|ref|WP_014150365.1| (RNA helicase [Methylomicrobium alcaliphilum] >gi|351719940|emb|CCE25616.1| ATP-dependent RNA helicase rhlB [Methylomicrobium alcaliphilum 20Z])

HSP 1 Score: 421.394 bits (1082), Expect = 9.192e-143
Identity = 199/392 (50.77%), Postives = 271/392 (69.13%), Query Frame = 0

Query:    1 MSNNHLTNKQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAFTRLYNAD---------------------IYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFIEHKIPVQSIDSDAIAKITIP 371
            M+  HLT  +F +  L   +L  L ++ F+HCTPIQ  SLP++L + D+ GQAQTGTGKT  FL+A F RL N +                     I++DA +L   LN ++AL YGG +YK Q + I++ VDI+IGTPGR+IDF +Q    L N++V+VLDEADRMFDLGF+KDIRFLLRR+P A +RLNMLFSAT+SY V ELAYEHMN P  + + + EV  K I++  + P++++K+PLL+ +++    QR I+F+NTK   ER+   L A      ++SGDV Q KR++LL DF++  I++++ATDVAARG+HI DV +VINYDLP  VEDYVHRIGRTAR GASG AISF CE Y++ +PDIE +I  K+P+Q I +D + ++  P
Sbjct:    1 MNTTHLTQTRFSNLELSDSILRGLTEAGFTHCTPIQDRSLPLSLRDKDIAGQAQTGTGKTATFLLATFQRLINDESEKIKNPRAVILAPTRELAIQIHKDALQLGKYLNLKLALIYGGTDYKKQMDTIKSNVDIIIGTPGRIIDFYRQGAFTLDNVQVMVLDEADRMFDLGFIKDIRFLLRRMPPADKRLNMLFSATLSYKVTELAYEHMNQPVLIKIETEEVTSKAIQQSAFCPSNEQKIPLLLGVLKKYAPQRSIIFVNTKRCAERLNDYLNANGFVTAVLSGDVPQEKRQRLLTDFQENKIRLMIATDVAARGLHIADVSHVINYDLPQEVEDYVHRIGRTARFGASGEAISFICEEYAYSMPDIETYIGQKVPIQPITADLLPEVVKP 392

[Close]

BLAST of dead deah box helicase vs. nr
Match: gi|1270432907|gb|PHS25619.1| (ATP-dependent RNA helicase RhlB [Methylophaga sp.])

HSP 1 Score: 421.009 bits (1081), Expect = 9.218e-143
Identity = 205/387 (52.97%), Postives = 262/387 (67.70%), Query Frame = 0

Query:    3 NNHLTNKQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAFTRLYNAD------------------------IYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFIEHKIPVQSIDSDAI 365
            + HLT + F   PL + L   L+ + F  CTPIQA+SLP+ L   DV GQAQTGTGKTIAFL+A F RL   +                        I +DA  LN E   RI +AYGG +Y  Q+  I  GVDI+IGTPGRL+D++KQ +  L++++ +VLDEADRMFDLGF+KD+R+ LRR+P   ERL MLFSAT+S+ V ELAYEHMN+P  V VA+ ++    IEE +Y+PA++EK+PLL+ LI+  E QR IVF+NTK   +RV   L    H A ++SGDV Q KRE LL  F++G+   LVATDVAARG+HI  V +V NYDLP   EDYVHRIGRTARAGASG AI+FACE Y+F LPDIE +I+HK+PV +   + +
Sbjct:    2 STHLTEQAFSSLPLHETLQKGLQSAGFEFCTPIQAQSLPLLLAGKDVAGQAQTGTGKTIAFLLATFQRLLTTEPPKNWNGKQPRAFILAPTRELANQIAKDAHLLNKEAKLRIVVAYGGKDYDKQKTAITDGVDILIGTPGRLLDYHKQHVFNLKSVQAVVLDEADRMFDLGFIKDVRYFLRRVPAPTERLGMLFSATLSFKVAELAYEHMNNPVKVEVAAGKIAGDNIEESVYYPANEEKVPLLLALIKRIEPQRSIVFVNTKRTADRVWGFLEGNGHKAALLSGDVPQKKRESLLKRFQEGEFPFLVATDVAARGLHIPAVSHVFNYDLPQDAEDYVHRIGRTARAGASGVAITFACEDYAFTLPDIEAYIKHKLPVATTSDEQL 388

[Close]

BLAST of dead deah box helicase vs. nr
Match: gi|1120462533|ref|WP_073324363.1| (ATP-dependent RNA helicase RhlB [Aestuariibacter aggregatus] >gi|1110253509|emb|SHG95307.1| ATP-dependent RNA helicase RhlB [Aestuariibacter aggregatus])

HSP 1 Score: 420.239 bits (1079), Expect = 1.682e-142
Identity = 209/389 (53.73%), Postives = 262/389 (67.35%), Query Frame = 0

Query:    1 MSNNHLTNKQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAF------------------------TRLYNADIYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFIEHKIPVQSIDSDAI 365
            M   HLT   F D P+   ++++L  +NF+HCTPIQA SLP  LE ND+ GQAQTGTGKT+AFL+A F                        TR     IY DA+ L       + L YGG  Y++Q+E ++ GVDIVIGT GR++D+ KQ +  L+NI+V VLDEADRMFDLGF+KDIRFL RR+P A ERL+MLFSAT+SY V+ELAYEHMN+PT+V V + ++   R+ E+L++P+ D+K+ LL+ LIE     + IVF NTKH  ERVA  L A  H  G++SGDV Q KR  +LD F KG + ILVATDVAARG+HI+ V +V NYDLP+  EDYVHRIGRT RAG SG AISFACE Y+  LP IE +I H IPV     DA+
Sbjct:    1 MQTTHLTETHFSDLPINGKVIDALNAANFTHCTPIQALSLPPLLEGNDIAGQAQTGTGKTMAFLVATFHHILSREQSPEDKNAGPRAIIMAPTRELAVQIYNDAELLGKHTGLSLGLIYGGEGYQSQRETLQDGVDIVIGTTGRIVDYYKQGVFSLKNIQVAVLDEADRMFDLGFIKDIRFLFRRMPAATERLSMLFSATLSYRVQELAYEHMNNPTHVQVEAQQMTASRVSEELFYPSDDDKMRLLLTLIEEEWPDKAIVFANTKHSCERVADWLEADGHRVGLLSGDVPQKKRLGILDAFTKGGLDILVATDVAARGLHIEAVTHVFNYDLPDDAEDYVHRIGRTGRAGKSGVAISFACEKYALNLPAIESYISHAIPVTDYVHDAL 389

[Close]

BLAST of dead deah box helicase vs. nr
Match: gi|504516708|ref|WP_014703810.1| (ATP-dependent RNA helicase RhlB [Methylophaga frappieri] >gi|386271476|gb|AFJ02390.1| ATP-dependent RNA helicase RhlB [Methylophaga frappieri])

HSP 1 Score: 421.394 bits (1082), Expect = 1.855e-142
Identity = 209/384 (54.43%), Postives = 263/384 (68.49%), Query Frame = 0

Query:    5 HLTNKQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAFTRLYNA----------------------DIYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFIEHKIPVQSIDSDAIA 366
            HLT+  F    L + L   L  + F+ CTPIQA++LP+ L N DV GQAQTGTGKTIAFL+A F RL +                        I +DA  LN   N RIALA+GG +Y+ Q++ I AG D++IGTPGRL+D++KQ++  L+ I+ +VLDEADRMFDLGF+KD+R+ LRR+P   +RL MLFSAT+SY V ELAYEHMN+P  V +A  +V   RIEE +Y+PA+DEK+PLL+ LI+     R IVF+NTKH  + V   L    H A ++SGDV Q KRE+LL  F+ G+   LVATDVAARG+HI +V +V NYDLP   EDYVHRIGRTARAGASG AISFACE Y F LPDIE +I+HKIPV S   + +A
Sbjct:   30 HLTDTAFSTLSLHENLQRGLADAGFAFCTPIQAQTLPLLLLNKDVAGQAQTGTGKTIAFLLATFQRLLSQPAQIDPQQPRALILAPTRELAIQIAKDAALLNKYANLRIALAHGGKDYQKQRDAIAAGCDMLIGTPGRLLDYHKQRVFDLRQIQAVVLDEADRMFDLGFIKDVRYFLRRIPKPSKRLGMLFSATLSYKVLELAYEHMNNPEKVQIAPEKVAADRIEETVYYPANDEKIPLLLALIKRINPLRSIVFVNTKHTADLVWGFLEGNGHKAALLSGDVPQKKRERLLTHFQDGEFPFLVATDVAARGLHIPEVSHVFNYDLPQDSEDYVHRIGRTARAGASGTAISFACEEYVFSLPDIERYIKHKIPVSSASDEQLA 413

[Close]

BLAST of dead deah box helicase vs. nr
Match: gi|1270387760|gb|PHR81955.1| (ATP-dependent RNA helicase RhlB [Methylophaga sp.])

HSP 1 Score: 419.853 bits (1078), Expect = 2.626e-142
Identity = 205/387 (52.97%), Postives = 262/387 (67.70%), Query Frame = 0

Query:    3 NNHLTNKQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAFTRLYNAD------------------------IYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFIEHKIPVQSIDSDAI 365
            + HLT   F   PL + L   L+ + F  CTPIQA+SLP+ L   DV GQAQTGTGKTIAFL+A F RL   +                        I +DA  LN E N RI +AYGG +Y  Q+  I  GVDI+IGTPGRL+D++KQ +  L++++ +VLDEADRMFDLGF+KD+R+ LRR+P   ERL MLFSAT+S+ V ELAYEHMN+P  V VA+ ++    IEE +Y+PA++EK+PLL+ L++  E QR IVF+NTK   +RV   L +  H A ++SGDV Q KRE LL  F+ G+   LVATDVAARG+HI  V +V NYDLP   EDYVHRIGRTARAGASG AI+FACE Y+F LPDIE +I+HK+PV +   + +
Sbjct:    2 STHLTEHAFSSLPLHETLQKGLQSAGFEFCTPIQAQSLPLLLAGKDVAGQAQTGTGKTIAFLLATFQRLLTTEPPKNWNGKQPRAFILAPTRELANQIAKDAILLNKEANLRIVVAYGGKDYDKQKTAITDGVDILIGTPGRLLDYHKQHVFNLKSVQAVVLDEADRMFDLGFIKDVRYFLRRVPAPTERLGMLFSATLSFKVAELAYEHMNNPVKVEVAAGKIASDNIEESVYYPANEEKIPLLLALLKRIEPQRSIVFVNTKRTADRVWGFLESNGHKAALLSGDVPQKKRESLLKRFQDGEFPFLVATDVAARGLHIPAVSHVFNYDLPQDAEDYVHRIGRTARAGASGVAITFACEDYAFTLPDIEAYIKHKLPVAATSDEQL 388

[Close]

BLAST of dead deah box helicase vs. nr
Match: gi|517812367|ref|WP_018982575.1| (ATP-dependent RNA helicase RhlB [Salinimonas chungwhensis])

HSP 1 Score: 419.853 bits (1078), Expect = 2.645e-142
Identity = 209/389 (53.73%), Postives = 265/389 (68.12%), Query Frame = 0

Query:    1 MSNNHLTNKQFKDFPLPQPLLNSLEQSNFSHCTPIQAESLPVTLENNDVIGQAQTGTGKTIAFLIAAFTRLY------NAD------------------IYEDAKKLNTELNYRIALAYGGNNYKAQQEVIEAGVDIVIGTPGRLIDFNKQKLLKLQNIEVLVLDEADRMFDLGFLKDIRFLLRRLPDAKERLNMLFSATVSYDVEELAYEHMNSPTNVAVASTEVEDKRIEEKLYFPASDEKLPLLVHLIESTEMQRGIVFINTKHVGERVAQTLIAMNHNAGIISGDVAQNKREKLLDDFRKGDIKILVATDVAARGIHIDDVDYVINYDLPNHVEDYVHRIGRTARAGASGHAISFACETYSFILPDIEEFIEHKIPVQSIDSDAI 365
            M   HLT   F D P+   +L++L+ +NF+HCTPIQA +LP  L+  D+ GQAQTGTGKTIAFL+A F  L       NAD                  IY DAK L+      + L YGG  Y++Q+E +E GVDI+IGT GR++D+ KQ +  L +I+V VLDEADRMFDLGF+KDIRFL +R+P A ERL+MLFSAT+SY V+ELAYEHMN+PT+V V       KR+ E+L++P+ ++K+ LL+ L+E    +R IVF NTKH  E+V   L A  H  G++SGDV Q KR  +LDDF KG + ILVATDVAARG+HID V +V NYDLP+  EDYVHRIGRT RAG SG AISFACE Y+  LP IE++I+H IPV   D  A+
Sbjct:    1 MQTTHLTETNFSDLPINDKVLSALQSANFTHCTPIQALALPPLLDGLDIAGQAQTGTGKTIAFLVATFHYLLANPAKDNADPKGPKAIIMAPTRELAMQIYNDAKPLSEHTGLSLGLIYGGEGYQSQRESLEEGVDIIIGTTGRILDYYKQNVFTLNHIQVAVLDEADRMFDLGFIKDIRFLFKRMPAASERLSMLFSATLSYRVQELAYEHMNNPTHVQVEPETKTAKRVSEELFYPSDEDKMRLLLTLMEEEWPERAIVFANTKHTCEKVNDWLEADGHRVGLLSGDVPQKKRMSILDDFTKGKLDILVATDVAARGLHIDSVSHVFNYDLPDDAEDYVHRIGRTGRAGKSGIAISFACEKYALNLPAIEQYIQHAIPVTDYDRTAL 389

The following BLAST results are available for this feature:

BLAST of dead deah box helicase vs. L. salmonis genes
BLAST of dead deah box helicase vs. SwissProt
BLAST of dead deah box helicase vs. nr

BLAST of dead deah box helicase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25


Match Name	E-value	Identity	Description
EMLSAG00000000846	1.031e-63	35.60	supercontig:LSalAtl2s:LSalAtl2s1142:195200:196664:...	[more]
EMLSAG00000010143	1.324e-61	36.66	supercontig:LSalAtl2s:LSalAtl2s66:712270:714003:-1...	[more]
EMLSAG00000004918	1.935e-61	37.65	supercontig:LSalAtl2s:LSalAtl2s259:1039310:1040989...	[more]
EMLSAG00000008048	3.900e-61	33.16	supercontig:LSalAtl2s:LSalAtl2s479:213954:217803:1...	[more]
EMLSAG00000000395	1.711e-60	34.46	supercontig:LSalAtl2s:LSalAtl2s1063:103535:105763:...	[more]
EMLSAG00000011452	8.445e-59	35.98	supercontig:LSalAtl2s:LSalAtl2s790:154718:161369:1...	[more]
EMLSAG00000005110	4.812e-57	31.51	supercontig:LSalAtl2s:LSalAtl2s26:913218:916036:-1...	[more]
EMLSAG00000001805	2.762e-55	33.43	supercontig:LSalAtl2s:LSalAtl2s1306:97666:99668:-1...	[more]
EMLSAG00000011390	3.597e-55	33.43	supercontig:LSalAtl2s:LSalAtl2s787:174367:180499:1...	[more]
EMLSAG00000002581	4.011e-55	33.43	supercontig:LSalAtl2s:LSalAtl2s151:1305107:1306803...	[more]

Pages

BLAST of dead deah box helicase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|189040044\|sp\|A8GZJ0.1\|RHLB_SHEPA	4.415e-143	51.67	RecName: Full=ATP-dependent RNA helicase RhlB	[more]
gi\|189040042\|sp\|B0TJ29.1\|RHLB_SHEHH	3.247e-142	51.41	RecName: Full=ATP-dependent RNA helicase RhlB	[more]
gi\|32363280\|sp\|Q87KH5.1\|RHLB_VIBPA	4.506e-142	52.96	RecName: Full=ATP-dependent RNA helicase RhlB	[more]
gi\|32363416\|sp\|Q9KV52.1\|RHLB_VIBCH	8.937e-141	51.67	RecName: Full=ATP-dependent RNA helicase RhlB >gi\|...	[more]
gi\|226739551\|sp\|B8CHZ1.1\|RHLB_SHEPW	2.745e-140	50.64	RecName: Full=ATP-dependent RNA helicase RhlB	[more]
gi\|189040086\|sp\|A7MXT4.1\|RHLB_VIBCB	2.324e-139	51.67	RecName: Full=ATP-dependent RNA helicase RhlB	[more]
gi\|32363316\|sp\|Q8DDN6.1\|RHLB_VIBVU	1.178e-138	50.62	RecName: Full=ATP-dependent RNA helicase RhlB	[more]
gi\|39931700\|sp\|Q7MGP7.1\|RHLB_VIBVY	1.530e-138	50.62	RecName: Full=ATP-dependent RNA helicase RhlB	[more]
gi\|122300890\|sp\|Q088J2.1\|RHLB_SHEFN	2.097e-138	50.39	RecName: Full=ATP-dependent RNA helicase RhlB	[more]
gi\|67461243\|sp\|Q5GUR8.2\|RHLB_XANOR	2.442e-138	52.42	RecName: Full=ATP-dependent RNA helicase RhlB	[more]

Pages

BLAST of dead deah box helicase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1000078450\|gb\|KXJ46941.1\|	1.076e-143	52.05	RNA helicase [Cycloclasticus sp. Phe_18]	[more]
gi\|503112332\|ref\|WP_013347065.1\|	1.210e-143	52.19	ATP-dependent RNA helicase RhlB [Ferrimonas balear...	[more]
gi\|1270480840\|gb\|PHS72356.1\|	1.645e-143	52.56	ATP-dependent RNA helicase RhlB [Cycloclasticus sp...	[more]
gi\|751281036\|ref\|WP_040989846.1\|	8.487e-143	52.70	ATP-dependent RNA helicase RhlB [Vibrio renipiscar...	[more]
gi\|503916371\|ref\|WP_014150365.1\|	9.192e-143	50.77	RNA helicase [Methylomicrobium alcaliphilum] >gi\|3...	[more]
gi\|1270432907\|gb\|PHS25619.1\|	9.218e-143	52.97	ATP-dependent RNA helicase RhlB [Methylophaga sp.]	[more]
gi\|1120462533\|ref\|WP_073324363.1\|	1.682e-142	53.73	ATP-dependent RNA helicase RhlB [Aestuariibacter a...	[more]
gi\|504516708\|ref\|WP_014703810.1\|	1.855e-142	54.43	ATP-dependent RNA helicase RhlB [Methylophaga frap...	[more]
gi\|1270387760\|gb\|PHR81955.1\|	2.626e-142	52.97	ATP-dependent RNA helicase RhlB [Methylophaga sp.]	[more]
gi\|517812367\|ref\|WP_018982575.1\|	2.645e-142	53.73	ATP-dependent RNA helicase RhlB [Salinimonas chung...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold8_size885657	supercontig	scaffold8_size885657:704699..706087 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:organic cyclic compound binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold8_size885657-snap-gene-7.3-mRNA-1	maker-scaffold8_size885657-snap-gene-7.3-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold8_size885657:704699..706087-

gene from alignment at scaffold8_size885657:704699..706087-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold8_size885657-snap-gene-7.3 ID=maker-scaffold8_size885657-snap-gene-7.3|Name=dead deah box helicase|organism=Tigriopus kingsejongensis|type=gene|length=1389bp|location=Sequence derived from alignment at scaffold8_size885657:704699..706087- (Tigriopus kingsejongensis)
ATGTCAAACAACCACTTAACGAATAAGCAATTTAAAGATTTCCCGCTGCC
GCAGCCATTACTAAATTCGCTTGAGCAAAGCAACTTTAGTCATTGCACGC
CTATTCAAGCAGAATCGCTACCAGTAACATTAGAAAATAACGATGTTATC
GGCCAAGCACAAACAGGAACGGGAAAGACCATTGCTTTCTTAATTGCTGC
ATTTACTCGACTATATAACGCCGATGTTGCCTTGGCAAACCCTGCGCTTG
CAAAAGTAGTGACTGAAGATAGCGCAGCAACAGAAGCTACAACCCCTGAC
AGTATCCCTGAGAGCATTGCTGAAACCATCGCTGAACCTACGGTTGCGGA
TACACCGGTTGCCGAAGCGGCCGCTACAGAAGTAGTTACTGCAGACGAAA
AAATAGACATGGCTAACGTGGTTGCTAATGCGCAAAAGAAAAGAGGCAAA
AACCCTCGCGCGATTATTATTGCCCCAACCCGTGAATTAGCGTTACAGAT
TTACGAAGACGCAAAAAAATTAAATACCGAATTAAACTACCGCATTGCCT
TGGCTTACGGTGGCAACAATTACAAAGCACAGCAAGAAGTTATTGAAGCG
GGTGTGGATATAGTTATCGGCACGCCAGGTCGTTTAATCGACTTCAATAA
GCAAAAATTACTAAAATTACAAAATATCGAAGTATTGGTTCTAGACGAAG
CCGATCGCATGTTCGATTTAGGCTTTTTAAAAGACATTCGCTTCTTACTA
CGCAGATTGCCAGACGCAAAAGAGCGTTTAAACATGCTGTTCTCAGCAAC
CGTTTCTTACGATGTGGAAGAGCTAGCTTACGAGCATATGAACTCGCCAA
CCAATGTAGCGGTTGCTAGTACAGAAGTAGAAGACAAGCGTATTGAAGAG
AAACTATACTTCCCTGCTAGCGATGAGAAGCTACCATTGTTAGTGCACTT
AATTGAAAGCACCGAAATGCAGCGCGGCATTGTATTTATTAACACCAAAC
ACGTTGGTGAGCGTGTAGCGCAAACCCTAATTGCCATGAATCATAATGCC
GGCATTATCTCTGGCGATGTAGCGCAAAACAAACGTGAAAAATTATTAGA
CGATTTCCGTAAAGGCGATATTAAAATATTGGTTGCGACCGATGTGGCCG
CTCGTGGTATTCATATAGACGATGTTGATTACGTTATTAACTACGACCTA
CCAAACCATGTTGAAGATTACGTTCACCGTATTGGCCGTACCGCACGTGC
TGGCGCATCTGGCCACGCTATAAGCTTTGCCTGTGAAACCTACTCTTTCA
TCTTGCCAGATATCGAAGAGTTTATTGAACATAAAATTCCAGTCCAATCT
ATAGATTCAGACGCGATTGCTAAGATTACTATTCCATCG

Synonyms

The feature 'dead deah box helicase' has the following synonyms


Synonym
Tk09892

Add to Basket

Pages

Pages

Pages

Search form