39s ribosomal protein mitochondrial precursor, maker-scaffold90_size386344-snap-gene-1.23 (gene) Tigriopus kingsejongensis

Overview
Name39s ribosomal protein mitochondrial precursor
Unique Namemaker-scaffold90_size386344-snap-gene-1.23
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. L. salmonis genes
Match: EMLSAG00000002399 (supercontig:LSalAtl2s:LSalAtl2s145:1549404:1550032:-1 gene:EMLSAG00000002399 transcript:EMLSAT00000002399 description:"maker-LSalAtl2s145-augustus-gene-15.24")

HSP 1 Score: 214.157 bits (544), Expect = 2.140e-71
Identity = 102/192 (53.12%), Postives = 141/192 (73.44%), Query Frame = 0 
Query:    1 MSKGAGRNIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLR 192
            MSK  G+  +Q  T +    ++  HIPAQMASP PPLGSQLG++GVNI  F++DFNLKTS+FK GVPIP  +T+N+DRS+N+ ++HPP+ Y + QAAGI RGAM    E+ G +TR+HVYEIA+LKSEDPL QM DL+ I  +I   A  +G+++VD +DP  Y  FL++   ++ +Q A+++A +EAKLLR
Sbjct:    1 MSK-MGKAAKQAATNVSRI-RIVTHIPAQMASPGPPLGSQLGELGVNIASFIKDFNLKTSIFKAGVPIPCKITLNADRSHNLVMAHPPFEYFLKQAAGISRGAMKN--EIVGMVTRKHVYEIAKLKSEDPLLQMIDLQEIVQRICVSARRVGIKIVDHLDPEEYDVFLKDASKVVEEQLAEIKAIKEAKLLR 188
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|22001929|sp|Q9VFJ2.1|RM11_DROME (RecName: Full=39S ribosomal protein L11, mitochondrial; Short=L11mt; Short=MRP-L11; Flags: Precursor)

HSP 1 Score: 197.208 bits (500), Expect = 4.090e-63
Identity = 90/195 (46.15%), Postives = 134/195 (68.72%), Query Frame = 0 
Query:    1 MSKGAGR--NIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLRT 193
            MSK AG+  ++++ + ++ H  K+  +IPA MA+  PPLG  LGQ  +NI  F +DFN KT+  K GVP+P  +++NSDRSY++++ HPP  + + QAAGIQRG M    EVAG IT +H+YEIA +K +DP   +  ++ +C+ ++  A   G++VV  IDP  Y EFL+ER+ I+ QQ+ +L+ KREAK+LRT
Sbjct:    1 MSKAAGKLKSLKKTVERVTHTSKLKTNIPAGMAAAGPPLGPMLGQRAINIAAFCKDFNAKTAEMKEGVPLPCRISVNSDRSYDLAIHHPPATFFLKQAAGIQRGTMTPGKEVAGMITLKHLYEIAAIKIQDPPNVLLTMQQMCEMLISIARTCGIKVVREIDPAAYGEFLEERKLIVEQQRRELQEKREAKMLRT 195
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|465702|sp|P34264.1|RM11_CAEEL (RecName: Full=Probable 39S ribosomal protein L11, mitochondrial; Flags: Precursor)

HSP 1 Score: 162.54 bits (410), Expect = 1.649e-49
Identity = 84/194 (43.30%), Postives = 120/194 (61.86%), Query Frame = 0 
Query:    2 SKGAGRNIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQV-VDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLRTA 194
            SKGA R  ++ + K+ HG  +  +I AQMAS APPLG QLGQ G+N+ +F ++FN +T  FK GVP+PT +T+  DR+Y++ +  P   +L+ QAAGI RG   KD E+ G +T +H+YEIA++KS D   Q   L  IC  ++     +G+ V    +DPV   EFL  R+  +  Q  DL  K+ AK+LRT 
Sbjct:    3 SKGAARVRKKEIVKVVHGALLRTNIKAQMASAAPPLGPQLGQRGLNVANFCKEFNKETGHFKQGVPLPTRITVKPDRTYDLEICTPTTTWLLKQAAGIGRGKASKD-EIVGKLTVKHLYEIAKIKSRDKALQHVPLEQICRMLIKTCRTLGIDVQYHDLDPVELKEFLVARKEKVDAQLKDLADKKAAKMLRTT 195
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|22001931|sp|Q9Y3B7.1|RM11_HUMAN (RecName: Full=39S ribosomal protein L11, mitochondrial; Short=L11mt; Short=MRP-L11; AltName: Full=Mitochondrial large ribosomal subunit protein uL11m; Flags: Precursor)

HSP 1 Score: 132.494 bits (332), Expect = 7.927e-38
Identity = 75/191 (39.27%), Postives = 111/191 (58.12%), Query Frame = 0 
Query:    1 MSKGAGRNIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFD--LRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQK-ADLEAKREA 188
            MSK  GR  R  + K + GG +   + A +A P PPLG  LGQ GV+IN F ++FN +T   K G+P+PT + +  DR++ + +  P   Y +  AAGI++GA     EVAG +T +HVYEIAR+K++D  + + D  L  +   I+  A  +G++VV  +     A F +ER   +  QK ADL A+ EA
Sbjct:    1 MSK-LGRAARG-LRKPEVGGVIRAIVRAGLAMPGPPLGPVLGQRGVSINQFCKEFNERTKDIKEGIPLPTKILVKPDRTFEIKIGQPTVSYFLKAAAGIEKGARQTGKEVAGLVTLKHVYEIARIKAQDEAFALQDVPLSSVVRSIIGSARSLGIRVVKDLSSEELAAFQKERAIFLAAQKEADLAAQEEA 189
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|81889859|sp|Q5XIE3.1|RM11_RAT (RecName: Full=39S ribosomal protein L11, mitochondrial; Short=L11mt; Short=MRP-L11; Flags: Precursor)

HSP 1 Score: 125.176 bits (313), Expect = 8.797e-35
Identity = 66/174 (37.93%), Postives = 99/174 (56.90%), Query Frame = 0 
Query:    8 NIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFD--LRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQK 179
             + + + K + GG +   + A  A P PPLG  LGQ GV+IN F ++FN KT   K G+P+PT + I  DR++ + +  P   Y +  AAGI++GA     EVAG ++ +HVYEIAR+K++D  + M D  L  I   I+  A  +G++VV  +     A F +ER   +  QK
Sbjct:    6 RVTRTLKKPEAGGVIRSIVRAGQAIPGPPLGPILGQRGVSINQFCKEFNEKTKDIKEGIPLPTKIFIKPDRTFELKIGQPTISYFLKAAAGIEKGARQTGKEVAGLVSLKHVYEIARVKAKDEAFAMQDVPLSSIVRSIIGSARSLGIRVVKDLSVDELAAFQKERAVFLAAQK 179
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|190352209|sp|Q2YDI0.2|RM11_BOVIN (RecName: Full=39S ribosomal protein L11, mitochondrial; Short=L11mt; Short=MRP-L11; Flags: Precursor)

HSP 1 Score: 123.635 bits (309), Expect = 2.535e-34
Identity = 61/154 (39.61%), Postives = 91/154 (59.09%), Query Frame = 0 
Query:   28 AQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFD--LRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQK 179
            A  A P PPLG  LGQ GV+IN F ++FN KT   K G+P+PT + +  DR++ + +  P   Y +  AAGI++GA +   EVAG +T +HVYEIAR+K++D  + + D  L  +   I+  A  +G++VV  +     A F +ER   +  QK
Sbjct:   26 AGQAMPGPPLGPILGQRGVSINQFCKEFNEKTKDIKEGIPLPTKIFVKPDRTFEIKIGQPTVSYFLKAAAGIEKGARNTGKEVAGLVTLKHVYEIARVKAQDDAFALQDVPLSSVVRSIIGSARSLGIRVVKDLSSEELAAFQKERALFLAAQK 179
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|22001924|sp|Q9CQF0.1|RM11_MOUSE (RecName: Full=39S ribosomal protein L11, mitochondrial; Short=L11mt; Short=MRP-L11; Flags: Precursor)

HSP 1 Score: 120.553 bits (301), Expect = 3.823e-33
Identity = 63/171 (36.84%), Postives = 96/171 (56.14%), Query Frame = 0 
Query:   11 QVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFD--LRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQK 179
            + + K + GG +   + A  A P PPLG  LGQ GV+IN F ++FN KT   K G+P+PT + I  DR++ + +  P   Y +  AAGI++GA     EVAG ++ +HVYEIA +K++D  + M D  L  +   I+  A  +G++VV  +       F +ER   +  QK
Sbjct:    9 RTLKKPEAGGVIRSIVRAGQAIPGPPLGPILGQRGVSINQFCKEFNEKTKDIKEGIPLPTKIFIKPDRTFELKIGQPTVSYFLKAAAGIEKGARHTGKEVAGLVSLKHVYEIACVKAKDDAFAMQDVPLSSVVRSIIGSARSLGIRVVKDLSAEELEAFQKERAVFLAAQK 179
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|254798454|sp|C0QQL2.1|RL11_PERMH (RecName: Full=50S ribosomal protein L11)

HSP 1 Score: 113.62 bits (283), Expect = 5.194e-31
Identity = 56/130 (43.08%), Postives = 78/130 (60.00%), Query Frame = 0 
Query:   26 IPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQV 155
            IPAQ ASP+PP+G  LGQ GVNI +FV+ FN  T+  KPG  +P  +T+ +DRS+   L  PP  YL+ +AAGI++GA D   E  G +T+  + EIA +K +D      D+      I   A  MG++V
Sbjct:   13 IPAQQASPSPPVGPALGQHGVNIMEFVKSFNAATAEMKPGTVVPVVITVYADRSFTFILKTPPASYLLKEAAGIKKGASDPKREKVGKVTKEQIREIAEIKMKD--LNTEDIEAAMRIIAGTARSMGIEV 140
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|226702788|sp|B2V7M4.1|RL11_SULSY (RecName: Full=50S ribosomal protein L11)

HSP 1 Score: 107.457 bits (267), Expect = 1.605e-28
Identity = 56/136 (41.18%), Postives = 79/136 (58.09%), Query Frame = 0 
Query:   20 GKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQV 155
            G++   IPAQ A+P+PP+G  LGQ GVNI +FV+ FN  T+  KPG  +P  +TI SDRS+   L  PP  YL+ +AAGI+ G+ D      G IT   + EIA +K +D      D+ +    I   A  MG+++
Sbjct:    7 GQVELMIPAQQAAPSPPVGPALGQHGVNIMEFVKSFNAATANMKPGTIVPVVITIYSDRSFTFILKTPPASYLLKEAAGIKTGSGDPKRNKVGKITVNQLREIAEMKLKD--LNTEDIEMAMRTIAGTARSMGIEI 140
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|74665573|sp|Q9UTK2.1|RM19_SCHPO (RecName: Full=54S ribosomal protein L19, mitochondrial; Flags: Precursor)

HSP 1 Score: 106.686 bits (265), Expect = 2.454e-28
Identity = 45/131 (34.35%), Postives = 79/131 (60.31%), Query Frame = 0 
Query:   26 IPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVV 156
            +PA  A+P PP+G  LG  G+   DF ++FN +T+ + P  P+P  +T+   R++  ++  PP  +LI +   +++G+     ++ G ++ +H+YEIA+LKS DP  Q  +L  +C  ++  A  MGV+VV
Sbjct:   13 VPAGKATPTPPIGPALGARGLKSIDFCKEFNARTAGWMPNTPVPCKITVTPQRTFTFTIHTPPTSWLISKTLDLEKGSSSPLHDIKGQLSLKHIYEIAKLKSTDPSLQGIELLSLCKSVIGTAKSMGVKVV 143
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|166230151|sp|A1TYI6.1|RL11_MARHV (RecName: Full=50S ribosomal protein L11)

HSP 1 Score: 104.76 bits (260), Expect = 1.335e-27
Identity = 52/131 (39.69%), Postives = 76/131 (58.02%), Query Frame = 0 
Query:   25 HIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQV 155
             + A  A+P+PP+G  LGQ GVNI +F + FN KT   +PG+PIPT +T+ SDRS+      PP P L+ +AAGI+ G+   + +  G +TR  + EIA  K+++P     D+      I   A  MG+ V
Sbjct:   12 QVAAGQANPSPPVGPALGQRGVNIMEFCKAFNAKTQGMEPGLPIPTVITVYSDRSFTFITKTPPAPVLLKKAAGIKSGSGRPNTDKVGTVTRAQLEEIA--KTKEPDLTAADMEAAVRTIAGTARSMGLNV 140
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1325305037|ref|XP_023334121.1| (39S ribosomal protein L11, mitochondrial-like [Eurytemora affinis])

HSP 1 Score: 219.935 bits (559), Expect = 1.375e-69
Identity = 98/187 (52.41%), Postives = 140/187 (74.87%), Query Frame = 0 
Query:    9 IRQVMTKIDH-GGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLRTA 194
            +R+   KI H  G +   IPAQ+A P PPLG+QLGQ+G NI +FV+DFNLKTS+F+ GVP+PT  TIN+DRSYN+++ HP   +L+ QAAG+ RGAM+   E+ GY+TR+H+YEIA +KS+DP  QM DL+ IC+ ++D A  +G+ VVD ++P  Y +FL+ R+ +I +Q  +++A +EAKLLRTA
Sbjct:    5 MRKTTAKIVHFKGGLRTTIPAQLAMPGPPLGTQLGQLGANIANFVKDFNLKTSIFREGVPLPTRTTINADRSYNLTIHHPTSTFLLKQAAGVSRGAMEHRKEIVGYLTRKHIYEIAVIKSQDPPLQMVDLKDICNDLIDTAFTIGIHVVDELNPAEYQKFLENRKLVIAEQLDEIKAAKEAKLLRTA 191
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|225712792|gb|ACO12242.1| (39S ribosomal protein L11, mitochondrial precursor [Lepeophtheirus salmonis])

HSP 1 Score: 214.542 bits (545), Expect = 1.444e-67
Identity = 102/192 (53.12%), Postives = 141/192 (73.44%), Query Frame = 0 
Query:    1 MSKGAGRNIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLR 192
            MSK  G+  +Q  T +    ++  HIPAQMASP PPLGSQLG++GVNI  F++DFNLKTS+FK GVPIP  +T+N+DRS+N+ ++HPP+ Y + QAAGI RGAM    E+ G +TR+HVYEIA+LKSEDPL QM DL+ I  +I   A  +G+++VD +DP  Y  FL++   ++ +Q A+++A +EAKLLR
Sbjct:    1 MSK-MGKAAKQAATNVSRI-RIVTHIPAQMASPGPPLGSQLGELGVNIASFIKDFNLKTSIFKAGVPIPCKITLNADRSHNLVMAHPPFEYFLKQAAGISRGAMKN--EIVGMVTRKHVYEIAKLKSEDPLLQMIDLQEIVQRICVSARRVGIKIVDHLDPEEYDVFLEDASKVVEEQLAEIKAIKEAKLLR 188
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|290562599|gb|ADD38695.1| (39S ribosomal protein L11, mitochondrial [Lepeophtheirus salmonis])

HSP 1 Score: 214.157 bits (544), Expect = 2.004e-67
Identity = 102/192 (53.12%), Postives = 141/192 (73.44%), Query Frame = 0 
Query:    1 MSKGAGRNIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLR 192
            MSK  G+  +Q  T +    ++  HIPAQMASP PPLGSQLG++GVNI  F++DFNLKTS+FK GVPIP  +T+N+DRS+N+ ++HPP+ Y + QAAGI RGAM    E+ G +TR+HVYEIA+LKSEDPL QM DL+ I  +I   A  +G+++VD +DP  Y  FL++   ++ +Q A+++A +EAKLLR
Sbjct:    1 MSK-MGKAAKQAATNVSRI-RIVTHIPAQMASPGPPLGSQLGELGVNIASFIKDFNLKTSIFKAGVPIPCKITLNADRSHNLVMAHPPFEYFLKQAAGISRGAMKN--EIVGMVTRKHVYEIAKLKSEDPLLQMIDLQEIVQRICVSARRVGIKIVDHLDPEEYDVFLKDASKVVEEQLAEIKAIKEAKLLR 188
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|225712362|gb|ACO12027.1| (39S ribosomal protein L11, mitochondrial precursor [Lepeophtheirus salmonis])

HSP 1 Score: 214.157 bits (544), Expect = 2.466e-67
Identity = 102/192 (53.12%), Postives = 141/192 (73.44%), Query Frame = 0 
Query:    1 MSKGAGRNIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLR 192
            MSK  G+  +Q  T +    ++  HIPAQMASP PPLGSQLG++GVNI  F++DFNLKT++FK GVPIP  +T+N+DRS+N+ +SHPP+ Y + QAAGI RGAM    E+ G +TR+HVYEIA+LKSEDPL QM DL+ I  +I   A  +G+++VD +DP  Y  FL++   ++ +Q A+++A +EAKLLR
Sbjct:    1 MSK-MGKAAKQAATNVSRI-RIVTHIPAQMASPGPPLGSQLGELGVNIASFIKDFNLKTNIFKAGVPIPCKITLNADRSHNLVMSHPPFEYFLKQAAGISRGAMKN--EIVGMVTRKHVYEIAKLKSEDPLLQMIDLQEIVQRICVSARRVGIKIVDHLDPEEYDVFLKDASKVVEEQLAEIKAIKEAKLLR 188
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|290463023|gb|ADD24559.1| (39S ribosomal protein L11, mitochondrial [Lepeophtheirus salmonis])

HSP 1 Score: 211.846 bits (538), Expect = 1.650e-66
Identity = 101/192 (52.60%), Postives = 139/192 (72.40%), Query Frame = 0 
Query:    1 MSKGAGRNIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLR 192
            MSK  G+  +Q  T +    ++  HIPAQMASP PPLGSQLG++GVN   F++DFNLKTS+FK GVPIP  +T+NSDRS+N+ ++HPP+ Y + QAAGI RGAM    E+ G +TR+HVYEIA+LKSEDPL QM DL+ I  +I   A  +G+++VD +DP  Y  FL++   ++ +Q A+++  +EAKLLR
Sbjct:    1 MSK-MGKAAKQAATNVSRI-RIVTHIPAQMASPGPPLGSQLGELGVNTASFIKDFNLKTSIFKAGVPIPCKITLNSDRSHNLVMAHPPFEYFLKQAAGISRGAMKN--EIVGMVTRKHVYEIAKLKSEDPLLQMIDLQEIVQRICVSARRVGIKIVDHLDPEEYDVFLKDASKVVEEQLAEIKVIKEAKLLR 188
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|225718400|gb|ACO15046.1| (39S ribosomal protein L11, mitochondrial precursor [Caligus clemensi])

HSP 1 Score: 211.46 bits (537), Expect = 2.553e-66
Identity = 94/172 (54.65%), Postives = 131/172 (76.16%), Query Frame = 0 
Query:   21 KMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLR 192
            ++  HIPAQ ASP PPLGSQLG++GVNI  FV+DFNLKTS++KPGVPIP ++T+N DR++N+ +SHPP+ + +MQAAGI+RG M K  E  G +TR+H+YEIA++KSEDP  QM D+  +  +    A  +G+++VD +DP  YAEFL+E   ++  Q A+L+A +EAKLLR
Sbjct:   19 RVITHIPAQKASPGPPLGSQLGELGVNIGAFVKDFNLKTSIYKPGVPIPCFITLNPDRTHNILMSHPPFEHFLMQAAGIRRGKMKK--ETVGMLTRKHIYEIAKVKSEDPRLQMIDMEEVVRRACVIAKNIGIKIVDRLDPEEYAEFLKESAQVVEDQLAELKAIKEAKLLR 188
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|225710470|gb|ACO11081.1| (39S ribosomal protein L11, mitochondrial precursor [Caligus rogercresseyi])

HSP 1 Score: 207.608 bits (527), Expect = 8.687e-65
Identity = 94/172 (54.65%), Postives = 131/172 (76.16%), Query Frame = 0 
Query:   21 KMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLR 192
            ++  HIPAQMASP PPLGSQLG++G+NI  F +DFNL+TS+FKPGVPIP  +T+N DR++++ +SHPP+ + +MQAAG++RGAM    E+ G +TR+HVYEIA+LKSEDPL QM DL+ I  +I   A  +G+++VD IDP  Y  FL++    +  Q A+++A +EAKLLR
Sbjct:   19 RILTHIPAQMASPGPPLGSQLGEMGINIGAFTKDFNLRTSIFKPGVPIPCKITLNPDRTHHLIMSHPPFEHFLMQAAGVKRGAMGN--EIVGMVTRKHVYEIAKLKSEDPLLQMIDLQEIVRRITVKAKKVGIKIVDHIDPEEYDVFLKDAAQAVEDQLAEIKAIKEAKLLR 188
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|939673391|ref|XP_014283030.1| (PREDICTED: 39S ribosomal protein L11, mitochondrial [Halyomorpha halys])

HSP 1 Score: 202.986 bits (515), Expect = 8.572e-63
Identity = 91/196 (46.43%), Postives = 134/196 (68.37%), Query Frame = 0 
Query:    1 MSKGAG--RNIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLRTA 194
            MSK A   +N+++ + K++HG K+  +IPA +ASP PPLG  LGQ+G+NI  F +DFN KT   K G+P+PT +T+N DRSYN++++ PP  + + QAAGIQR +M+   EV G IT +H+YEIA++KS D + +   L  +C K V  AH  G+++V  +D   Y +FLQ R+ ++  QK +L+ KREAK+LRT 
Sbjct:    1 MSKAARAVKNVKKSLVKVNHGNKVKTNIPAGLASPGPPLGPMLGQVGLNIAAFCKDFNEKTKDIKEGIPLPTRITVNPDRSYNLTINKPPTTFFLKQAAGIQRCSMEPGKEVCGKITLKHLYEIAKIKSTDSVNECLSLEDLCRKFVGIAHSCGIEIVKELDSNEYQQFLQHRKKVVDDQKKELQEKREAKMLRTG 196
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|939232855|ref|XP_014257934.1| (39S ribosomal protein L11, mitochondrial [Cimex lectularius])

HSP 1 Score: 201.06 bits (510), Expect = 4.699e-62
Identity = 90/195 (46.15%), Postives = 135/195 (69.23%), Query Frame = 0 
Query:    1 MSKGAGR---NIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLR 192
            MSK   +     ++V+ K++HG ++  +IPA +A+P PPLG  LGQ G+NI  F +DFN +T   K G+P+P+ +T+N DRSY++ +  PP  + + QAAGIQR AM+   E++G +TR+H+YEIA++KSEDP+++   L  IC KI+  AH  G++VVD +D   Y  FL+ER+ II +QK  L+ K+EAK+LR
Sbjct:    1 MSKAGAKVMKGFKKVVDKVNHGNRIKTNIPAGLAAPGPPLGPMLGQHGINIASFCKDFNERTKDIKEGIPLPSRITVNPDRSYSIVIHKPPATFFLKQAAGIQRAAMEPGKEISGKVTRKHIYEIAKIKSEDPVFECVPLEQICKKIIGIAHSCGIEVVDKLDSQEYQTFLEERKLIIEEQKKQLQEKKEAKMLR 195
[Close]
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1036899866|ref|XP_017002473.1| (PREDICTED: 39S ribosomal protein L11, mitochondrial [Drosophila takahashii])

HSP 1 Score: 199.519 bits (506), Expect = 1.839e-61
Identity = 91/195 (46.67%), Postives = 133/195 (68.21%), Query Frame = 0 
Query:    1 MSKGAGR--NIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLRT 193
            MSK AG+  ++++ + ++ H  K+  +IPA MA+  PPLG  LGQ  +NI  F +DFN KT+  K GVP+P  +++NSDRSY++ + HPP  + + QAAGIQRG M    EVAG IT +H+YEIA +K +DP   +  ++ +C+ ++  A   G+QVV  IDP  Y EFL+ER+ I+ QQ+ +L+ KREAK+LRT
Sbjct:    1 MSKAAGKLKSLKKTVERVTHTSKLKTNIPAGMAAAGPPLGPMLGQRAINIAAFCKDFNAKTAEMKEGVPLPCRISVNSDRSYDLVIHHPPATFFLKQAAGIQRGTMTPGKEVAGKITLKHLYEIAAIKIQDPPNALLTMQQMCEMLISIARTCGIQVVKEIDPAAYGEFLEERKTIVEQQRRELQEKREAKMLRT 195
The following BLAST results are available for this feature:
BLAST of 39s ribosomal protein mitochondrial precursor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000023992.140e-7153.13supercontig:LSalAtl2s:LSalAtl2s145:1549404:1550032... [more]
back to top
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|22001929|sp|Q9VFJ2.1|RM11_DROME4.090e-6346.15RecName: Full=39S ribosomal protein L11, mitochond... [more]
gi|465702|sp|P34264.1|RM11_CAEEL1.649e-4943.30RecName: Full=Probable 39S ribosomal protein L11, ... [more]
gi|22001931|sp|Q9Y3B7.1|RM11_HUMAN7.927e-3839.27RecName: Full=39S ribosomal protein L11, mitochond... [more]
gi|81889859|sp|Q5XIE3.1|RM11_RAT8.797e-3537.93RecName: Full=39S ribosomal protein L11, mitochond... [more]
gi|190352209|sp|Q2YDI0.2|RM11_BOVIN2.535e-3439.61RecName: Full=39S ribosomal protein L11, mitochond... [more]
gi|22001924|sp|Q9CQF0.1|RM11_MOUSE3.823e-3336.84RecName: Full=39S ribosomal protein L11, mitochond... [more]
gi|254798454|sp|C0QQL2.1|RL11_PERMH5.194e-3143.08RecName: Full=50S ribosomal protein L11[more]
gi|226702788|sp|B2V7M4.1|RL11_SULSY1.605e-2841.18RecName: Full=50S ribosomal protein L11[more]
gi|74665573|sp|Q9UTK2.1|RM19_SCHPO2.454e-2834.35RecName: Full=54S ribosomal protein L19, mitochond... [more]
gi|166230151|sp|A1TYI6.1|RL11_MARHV1.335e-2739.69RecName: Full=50S ribosomal protein L11[more]

Pages

back to top
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1325305037|ref|XP_023334121.1|1.375e-6952.4139S ribosomal protein L11, mitochondrial-like [Eur... [more]
gi|225712792|gb|ACO12242.1|1.444e-6753.1339S ribosomal protein L11, mitochondrial precursor... [more]
gi|290562599|gb|ADD38695.1|2.004e-6753.1339S ribosomal protein L11, mitochondrial [Lepeopht... [more]
gi|225712362|gb|ACO12027.1|2.466e-6753.1339S ribosomal protein L11, mitochondrial precursor... [more]
gi|290463023|gb|ADD24559.1|1.650e-6652.6039S ribosomal protein L11, mitochondrial [Lepeopht... [more]
gi|225718400|gb|ACO15046.1|2.553e-6654.6539S ribosomal protein L11, mitochondrial precursor... [more]
gi|225710470|gb|ACO11081.1|8.687e-6554.6539S ribosomal protein L11, mitochondrial precursor... [more]
gi|939673391|ref|XP_014283030.1|8.572e-6346.43PREDICTED: 39S ribosomal protein L11, mitochondria... [more]
gi|939232855|ref|XP_014257934.1|4.699e-6246.1539S ribosomal protein L11, mitochondrial [Cimex le... [more]
gi|1036899866|ref|XP_017002473.1|1.839e-6146.67PREDICTED: 39S ribosomal protein L11, mitochondria... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold90_size386344supercontigscaffold90_size386344:164708..166335 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:ribonucleoprotein complex
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold90_size386344-snap-gene-1.23-mRNA-1maker-scaffold90_size386344-snap-gene-1.23-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold90_size386344:164708..166335-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold90_size386344-snap-gene-1.23 ID=maker-scaffold90_size386344-snap-gene-1.23|Name=39s ribosomal protein mitochondrial precursor|organism=Tigriopus kingsejongensis|type=gene|length=1628bp|location=Sequence derived from alignment at scaffold90_size386344:164708..166335- (Tigriopus kingsejongensis)
CGGAGCTCGGCTGAAGTCAACACTGTGCCCGAGGTGGAACGAGATCGGGG
ACCATGTCGAAAGGAGCCGGGCGCAACATCCGTCAGGTCATGACCAAGAT
CGACCACGGGGGCAAGATGTTCAAGCACATCCCCGCTCAAATGGCCTCAC
CCGCTCCGCCCTTGGGCTCCCAATTGGGACAGGTGAGCAGCGCCCTGGGC
CCATGAGCGCCAGACTTGCCTGGAGAGCCGGATGCGACCATGAACCATGA
GCCGGACGTGGGTGGGCCGAGCTCTCGATCATCGTCTCTGGCTGGCTCAT
GGAGCCGAAAAGGGGTGTATTGGGCTGGCGACTCCATGACAAAAAAAAAA
CCTAACGCATGCACTTATGGATAGGGGCGGACGGGTTTCTTAGGTTGCCG
ATGGCACGCATACTCGCGCGTTGGAGTTGGAGGGCGGTGTGCCCTCACCC
TCTATGATTCGGCTCACCCTCACCTAATCCGGGCGGTGGGGTCTGAACCA
ATGGCCGAGCTGAGCGGGGAGTGAGGCCGTCAGCCGCAATACAATGGGGA
TTGAATGGTGAAGTGGTCAGCGAAGAAGTCTGCCGTGCTGAAAGGCCGCA
GATCGATTCCCGGGCCCGACGGACAAAGAAATTTTCGCCGCGCCAGACTT
TCTTCGACTGCGGGGAGTGAATGACGACTCCCTGTAACCTGAGTCGTTCA
AAGGTCAGGAAAAACGGGTGCGGTCACATCTTGAGGAAAGGTCCCTTCTG
GTTCCCCACAAATTAAAGTAGTGGCTGGAGCTGGATTGTAAGGGGCTGCC
CGGCGACTAGCTACATTAGCTAATAACATCAGTGGGCCCCTGTGTTCACC
ATGGGGGTTCCCTGGTGTAGCACACGAAACCACCAGTAGGTGCGATTACA
CACACAACTTGAGCCTTACTTCCAGATCGGCGTCAACATCAACGACTTTG
TGCGCGACTTCAATCTCAAAACGTCCGTGTTCAAGCCGGGCGTGCCCATC
CCCACCTACGTGACCATCAACTCGGATCGCTCGTATAACATGAGCCTGAG
CCATCCGCCTTGGCCGTACTTGATTATGCAGGCGGCCGGCATCCAACGGG
GGGCCATGGACAAGGACGTGGAGGTGGCCGGCTACATCACCCGACGTCAC
GTGTACGAGATCGCCCGCCTCAAGTCCGAAGATCCGCTCTGGCAGATGTT
CGACCTCCGCATCATCTGCGACAAAATCGTCGACTATGCCCACGGCATGG
GTGTCCAGGTAGGCGGACCGGGCCTGCTGCCCGCCACGCCCTCGCGTAAC
TGACCCGGTTTTTGGCCTTGCAGGTGGTCGATGCCATCGATCCGGTCTGG
TATGCCGAGTTTCTCCAGGAGCGCCAAGGGATCATCGTCCAGCAAAAGGC
CGACCTGGAGGCCAAACGCGAGGCCAAACTCTTGCGAACCGCGCAAGCGG
CTGAGAAGGAGGCCAAGCGCGAAAAAGAATTGGCCCTTAAAGCCTAATGG
CCAAACGGCGGTTCGGGACCCGCCGCTAGGGTAGTGAATAGTGATAGGGT
ACGTGCCCTTCGTCGATTAAATCATTTATGTGCGAAACGATCGGTCAATG
TGTATTTACTGCCCGGCTCATACGGGAC
back to top
Synonyms
The feature '39s ribosomal protein mitochondrial precursor' has the following synonyms
Synonym
Tk12047
Add to Basket