39s ribosomal protein mitochondrial precursor, maker-scaffold90_size386344-snap-gene-1.23 (gene) Tigriopus kingsejongensis

Overview


Name	39s ribosomal protein mitochondrial precursor
Unique Name	maker-scaffold90_size386344-snap-gene-1.23
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of 39s ribosomal protein mitochondrial precursor vs. L. salmonis genes
Match: EMLSAG00000002399 (supercontig:LSalAtl2s:LSalAtl2s145:1549404:1550032:-1 gene:EMLSAG00000002399 transcript:EMLSAT00000002399 description:"maker-LSalAtl2s145-augustus-gene-15.24")

HSP 1 Score: 214.157 bits (544), Expect = 2.140e-71
Identity = 102/192 (53.12%), Postives = 141/192 (73.44%), Query Frame = 0

Query:    1 MSKGAGRNIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLR 192
            MSK  G+  +Q  T +    ++  HIPAQMASP PPLGSQLG++GVNI  F++DFNLKTS+FK GVPIP  +T+N+DRS+N+ ++HPP+ Y + QAAGI RGAM    E+ G +TR+HVYEIA+LKSEDPL QM DL+ I  +I   A  +G+++VD +DP  Y  FL++   ++ +Q A+++A +EAKLLR
Sbjct:    1 MSK-MGKAAKQAATNVSRI-RIVTHIPAQMASPGPPLGSQLGELGVNIASFIKDFNLKTSIFKAGVPIPCKITLNADRSHNLVMAHPPFEYFLKQAAGISRGAMKN--EIVGMVTRKHVYEIAKLKSEDPLLQMIDLQEIVQRICVSARRVGIKIVDHLDPEEYDVFLKDASKVVEEQLAEIKAIKEAKLLR 188

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BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|22001929|sp|Q9VFJ2.1|RM11_DROME (RecName: Full=39S ribosomal protein L11, mitochondrial; Short=L11mt; Short=MRP-L11; Flags: Precursor)

HSP 1 Score: 197.208 bits (500), Expect = 4.090e-63
Identity = 90/195 (46.15%), Postives = 134/195 (68.72%), Query Frame = 0

Query:    1 MSKGAGR--NIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLRT 193
            MSK AG+  ++++ + ++ H  K+  +IPA MA+  PPLG  LGQ  +NI  F +DFN KT+  K GVP+P  +++NSDRSY++++ HPP  + + QAAGIQRG M    EVAG IT +H+YEIA +K +DP   +  ++ +C+ ++  A   G++VV  IDP  Y EFL+ER+ I+ QQ+ +L+ KREAK+LRT
Sbjct:    1 MSKAAGKLKSLKKTVERVTHTSKLKTNIPAGMAAAGPPLGPMLGQRAINIAAFCKDFNAKTAEMKEGVPLPCRISVNSDRSYDLAIHHPPATFFLKQAAGIQRGTMTPGKEVAGMITLKHLYEIAAIKIQDPPNVLLTMQQMCEMLISIARTCGIKVVREIDPAAYGEFLEERKLIVEQQRRELQEKREAKMLRT 195

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BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|465702|sp|P34264.1|RM11_CAEEL (RecName: Full=Probable 39S ribosomal protein L11, mitochondrial; Flags: Precursor)

HSP 1 Score: 162.54 bits (410), Expect = 1.649e-49
Identity = 84/194 (43.30%), Postives = 120/194 (61.86%), Query Frame = 0

Query:    2 SKGAGRNIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQV-VDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLRTA 194
            SKGA R  ++ + K+ HG  +  +I AQMAS APPLG QLGQ G+N+ +F ++FN +T  FK GVP+PT +T+  DR+Y++ +  P   +L+ QAAGI RG   KD E+ G +T +H+YEIA++KS D   Q   L  IC  ++     +G+ V    +DPV   EFL  R+  +  Q  DL  K+ AK+LRT 
Sbjct:    3 SKGAARVRKKEIVKVVHGALLRTNIKAQMASAAPPLGPQLGQRGLNVANFCKEFNKETGHFKQGVPLPTRITVKPDRTYDLEICTPTTTWLLKQAAGIGRGKASKD-EIVGKLTVKHLYEIAKIKSRDKALQHVPLEQICRMLIKTCRTLGIDVQYHDLDPVELKEFLVARKEKVDAQLKDLADKKAAKMLRTT 195

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BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|22001931|sp|Q9Y3B7.1|RM11_HUMAN (RecName: Full=39S ribosomal protein L11, mitochondrial; Short=L11mt; Short=MRP-L11; AltName: Full=Mitochondrial large ribosomal subunit protein uL11m; Flags: Precursor)

HSP 1 Score: 132.494 bits (332), Expect = 7.927e-38
Identity = 75/191 (39.27%), Postives = 111/191 (58.12%), Query Frame = 0

Query:    1 MSKGAGRNIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFD--LRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQK-ADLEAKREA 188
            MSK  GR  R  + K + GG +   + A +A P PPLG  LGQ GV+IN F ++FN +T   K G+P+PT + +  DR++ + +  P   Y +  AAGI++GA     EVAG +T +HVYEIAR+K++D  + + D  L  +   I+  A  +G++VV  +     A F +ER   +  QK ADL A+ EA
Sbjct:    1 MSK-LGRAARG-LRKPEVGGVIRAIVRAGLAMPGPPLGPVLGQRGVSINQFCKEFNERTKDIKEGIPLPTKILVKPDRTFEIKIGQPTVSYFLKAAAGIEKGARQTGKEVAGLVTLKHVYEIARIKAQDEAFALQDVPLSSVVRSIIGSARSLGIRVVKDLSSEELAAFQKERAIFLAAQKEADLAAQEEA 189

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BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|81889859|sp|Q5XIE3.1|RM11_RAT (RecName: Full=39S ribosomal protein L11, mitochondrial; Short=L11mt; Short=MRP-L11; Flags: Precursor)

HSP 1 Score: 125.176 bits (313), Expect = 8.797e-35
Identity = 66/174 (37.93%), Postives = 99/174 (56.90%), Query Frame = 0

Query:    8 NIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFD--LRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQK 179
             + + + K + GG +   + A  A P PPLG  LGQ GV+IN F ++FN KT   K G+P+PT + I  DR++ + +  P   Y +  AAGI++GA     EVAG ++ +HVYEIAR+K++D  + M D  L  I   I+  A  +G++VV  +     A F +ER   +  QK
Sbjct:    6 RVTRTLKKPEAGGVIRSIVRAGQAIPGPPLGPILGQRGVSINQFCKEFNEKTKDIKEGIPLPTKIFIKPDRTFELKIGQPTISYFLKAAAGIEKGARQTGKEVAGLVSLKHVYEIARVKAKDEAFAMQDVPLSSIVRSIIGSARSLGIRVVKDLSVDELAAFQKERAVFLAAQK 179

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BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|190352209|sp|Q2YDI0.2|RM11_BOVIN (RecName: Full=39S ribosomal protein L11, mitochondrial; Short=L11mt; Short=MRP-L11; Flags: Precursor)

HSP 1 Score: 123.635 bits (309), Expect = 2.535e-34
Identity = 61/154 (39.61%), Postives = 91/154 (59.09%), Query Frame = 0

Query:   28 AQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFD--LRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQK 179
            A  A P PPLG  LGQ GV+IN F ++FN KT   K G+P+PT + +  DR++ + +  P   Y +  AAGI++GA +   EVAG +T +HVYEIAR+K++D  + + D  L  +   I+  A  +G++VV  +     A F +ER   +  QK
Sbjct:   26 AGQAMPGPPLGPILGQRGVSINQFCKEFNEKTKDIKEGIPLPTKIFVKPDRTFEIKIGQPTVSYFLKAAAGIEKGARNTGKEVAGLVTLKHVYEIARVKAQDDAFALQDVPLSSVVRSIIGSARSLGIRVVKDLSSEELAAFQKERALFLAAQK 179

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BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|22001924|sp|Q9CQF0.1|RM11_MOUSE (RecName: Full=39S ribosomal protein L11, mitochondrial; Short=L11mt; Short=MRP-L11; Flags: Precursor)

HSP 1 Score: 120.553 bits (301), Expect = 3.823e-33
Identity = 63/171 (36.84%), Postives = 96/171 (56.14%), Query Frame = 0

Query:   11 QVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFD--LRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQK 179
            + + K + GG +   + A  A P PPLG  LGQ GV+IN F ++FN KT   K G+P+PT + I  DR++ + +  P   Y +  AAGI++GA     EVAG ++ +HVYEIA +K++D  + M D  L  +   I+  A  +G++VV  +       F +ER   +  QK
Sbjct:    9 RTLKKPEAGGVIRSIVRAGQAIPGPPLGPILGQRGVSINQFCKEFNEKTKDIKEGIPLPTKIFIKPDRTFELKIGQPTVSYFLKAAAGIEKGARHTGKEVAGLVSLKHVYEIACVKAKDDAFAMQDVPLSSVVRSIIGSARSLGIRVVKDLSAEELEAFQKERAVFLAAQK 179

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BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|254798454|sp|C0QQL2.1|RL11_PERMH (RecName: Full=50S ribosomal protein L11)

HSP 1 Score: 113.62 bits (283), Expect = 5.194e-31
Identity = 56/130 (43.08%), Postives = 78/130 (60.00%), Query Frame = 0

Query:   26 IPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQV 155
            IPAQ ASP+PP+G  LGQ GVNI +FV+ FN  T+  KPG  +P  +T+ +DRS+   L  PP  YL+ +AAGI++GA D   E  G +T+  + EIA +K +D      D+      I   A  MG++V
Sbjct:   13 IPAQQASPSPPVGPALGQHGVNIMEFVKSFNAATAEMKPGTVVPVVITVYADRSFTFILKTPPASYLLKEAAGIKKGASDPKREKVGKVTKEQIREIAEIKMKD--LNTEDIEAAMRIIAGTARSMGIEV 140

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BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|226702788|sp|B2V7M4.1|RL11_SULSY (RecName: Full=50S ribosomal protein L11)

HSP 1 Score: 107.457 bits (267), Expect = 1.605e-28
Identity = 56/136 (41.18%), Postives = 79/136 (58.09%), Query Frame = 0

Query:   20 GKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQV 155
            G++   IPAQ A+P+PP+G  LGQ GVNI +FV+ FN  T+  KPG  +P  +TI SDRS+   L  PP  YL+ +AAGI+ G+ D      G IT   + EIA +K +D      D+ +    I   A  MG+++
Sbjct:    7 GQVELMIPAQQAAPSPPVGPALGQHGVNIMEFVKSFNAATANMKPGTIVPVVITIYSDRSFTFILKTPPASYLLKEAAGIKTGSGDPKRNKVGKITVNQLREIAEMKLKD--LNTEDIEMAMRTIAGTARSMGIEI 140

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BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|74665573|sp|Q9UTK2.1|RM19_SCHPO (RecName: Full=54S ribosomal protein L19, mitochondrial; Flags: Precursor)

HSP 1 Score: 106.686 bits (265), Expect = 2.454e-28
Identity = 45/131 (34.35%), Postives = 79/131 (60.31%), Query Frame = 0

Query:   26 IPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVV 156
            +PA  A+P PP+G  LG  G+   DF ++FN +T+ + P  P+P  +T+   R++  ++  PP  +LI +   +++G+     ++ G ++ +H+YEIA+LKS DP  Q  +L  +C  ++  A  MGV+VV
Sbjct:   13 VPAGKATPTPPIGPALGARGLKSIDFCKEFNARTAGWMPNTPVPCKITVTPQRTFTFTIHTPPTSWLISKTLDLEKGSSSPLHDIKGQLSLKHIYEIAKLKSTDPSLQGIELLSLCKSVIGTAKSMGVKVV 143

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BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|166230151|sp|A1TYI6.1|RL11_MARHV (RecName: Full=50S ribosomal protein L11)

HSP 1 Score: 104.76 bits (260), Expect = 1.335e-27
Identity = 52/131 (39.69%), Postives = 76/131 (58.02%), Query Frame = 0

Query:   25 HIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQV 155
             + A  A+P+PP+G  LGQ GVNI +F + FN KT   +PG+PIPT +T+ SDRS+      PP P L+ +AAGI+ G+   + +  G +TR  + EIA  K+++P     D+      I   A  MG+ V
Sbjct:   12 QVAAGQANPSPPVGPALGQRGVNIMEFCKAFNAKTQGMEPGLPIPTVITVYSDRSFTFITKTPPAPVLLKKAAGIKSGSGRPNTDKVGTVTRAQLEEIA--KTKEPDLTAADMEAAVRTIAGTARSMGLNV 140

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BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|675881960|ref|XP_009026482.1| (hypothetical protein HELRODRAFT_86877 [Helobdella robusta] >gi|555692156|gb|ESN95388.1| hypothetical protein HELRODRAFT_86877 [Helobdella robusta])

HSP 1 Score: 199.134 bits (505), Expect = 2.365e-61
Identity = 92/194 (47.42%), Postives = 132/194 (68.04%), Query Frame = 0

Query:    1 MSKGAGRNIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLRTA 194
            MSK   + ++++  KI+H   +   IPA +ASPAPPLG+QLGQ  + I +F +DFN KT   K G P+PT +TINSDRSYN+ + +PP  Y +  AAGI RGAM    EV+G+++ +H+YEIA +KS DP W+   L  IC  I+  AH  G++VV+ +D  +YA+FL+ER+ I+ +QK +L+  + AKLLR A
Sbjct:    1 MSKVVAKGMKKISEKINHPPFLSVTIPAGLASPAPPLGTQLGQRNIQIANFCKDFNEKTKNIKEGTPLPTRITINSDRSYNLVIHNPPVSYFLKLAAGIDRGAMKTGREVSGFVSLKHIYEIAAIKSADPCWKHVPLNEICQSIIGTAHSCGIEVVEELDENFYAQFLKERREIVEKQKLELQELKAAKLLRVA 194

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BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|998499563|ref|XP_015509678.1| (PREDICTED: 39S ribosomal protein L11, mitochondrial [Neodiprion lecontei])

HSP 1 Score: 199.134 bits (505), Expect = 2.551e-61
Identity = 90/187 (48.13%), Postives = 131/187 (70.05%), Query Frame = 0

Query:    7 RNIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLRT 193
            +++R+++ K+DH  K+   IPA MA P+PPLG  LGQ  +NI+ F +DFN +T   K G+P+P  V + SDR+Y++ +  PP  + + QAAGIQRGAM    EVAG IT +H+YEIA++KSEDP   + DL+ IC+  V  A   G+QVV  +DPV Y +FL+ER+ +I +QK +L+ K+EA++LRT
Sbjct:    9 KSMRKLVEKVDHSSKLRTDIPAGMAMPSPPLGPVLGQRNINISAFCKDFNERTKDIKEGIPLPCRVRVTSDRTYDLVIHKPPTTFYLKQAAGIQRGAMHSGEEVAGKITLKHLYEIAKIKSEDPSMALLDLKQICEMFVGVARSCGIQVVRELDPVEYGKFLEERKLVIEEQKRELQEKKEARMLRT 195

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BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1036881840|ref|XP_017047122.1| (PREDICTED: 39S ribosomal protein L11, mitochondrial [Drosophila ficusphila])

HSP 1 Score: 198.364 bits (503), Expect = 4.498e-61
Identity = 90/195 (46.15%), Postives = 133/195 (68.21%), Query Frame = 0

Query:    1 MSKGAGR--NIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLRT 193
            MSK AG+  ++++ + ++ H  K+  +IPA MA+  PPLG  LGQ  +NI  F +DFN KT+  K GVP+P  +++NSDRSY++ + HPP  + + QAAGIQRG M    EVAG IT +H+YEIA +K +DP   +  ++ +C+ ++  A   G++VV  IDP  Y EFL+ER+ I+ QQ+ +L+ KREAK+LRT
Sbjct:    1 MSKAAGKLKSLKKTVERVTHTSKLKTNIPAGMAAAGPPLGPMLGQRAINIAAFCKDFNAKTAEMKEGVPLPCRISVNSDRSYDLVIHHPPATFFLKQAAGIQRGTMTPGKEVAGKITLKHLYEIAAIKIQDPPNALLTMKQMCEMLISIARTCGIKVVKEIDPAEYGEFLEERKTIVEQQRRELQEKREAKMLRT 195

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BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|665810340|ref|XP_008553587.1| (PREDICTED: 39S ribosomal protein L11, mitochondrial [Microplitis demolitor])

HSP 1 Score: 198.364 bits (503), Expect = 5.718e-61
Identity = 97/196 (49.49%), Postives = 136/196 (69.39%), Query Frame = 0

Query:    1 MSKGAGR--NIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLRTA 194
            MSK A R    +++M KIDH  K+  +IPA +ASP+PPLGSQLGQ  VNI +FV+DFN KT+  K G+PIP  V +  DR+Y++ +  PP  Y +MQAAGIQRGAM+   E+AG IT +H+YEIA++KS+DP   +  L  I    V+ A  +G+++V  +DP  Y +FL+ER+ I+ +QK  L+  +EAK+LRTA
Sbjct:    1 MSKVASRLKKTKKLMDKIDHSSKLRTNIPAGLASPSPPLGSQLGQRNVNIANFVKDFNEKTAHIKQGIPIPCRVKVLPDRTYDLVMHLPPTGYYLMQAAGIQRGAMNSANEIAGKITLKHLYEIAKIKSQDPPLSLLTLPQITQMFVNIARTIGIKIVRDLDPEEYGQFLKEREVIVAEQKKALQEAKEAKMLRTA 196

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BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1036980611|ref|XP_017076663.1| (PREDICTED: 39S ribosomal protein L11, mitochondrial [Drosophila eugracilis])

HSP 1 Score: 197.978 bits (502), Expect = 7.760e-61
Identity = 90/195 (46.15%), Postives = 132/195 (67.69%), Query Frame = 0

Query:    1 MSKGAGR--NIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLRT 193
            MSK AG+  ++++ + ++ H  K+  +IPA MA+  PPLG  LGQ  +NI  F +DFN KT+  K GVP+P  +++NSDRSY + + HPP  + + QAAGIQRG M    EVAG IT +H+YEIA +K +DP   +  ++ +C+ ++  A   G++VV  IDP  Y EFL+ER+ I+ QQ+ +L+ KREAK+LRT
Sbjct:    1 MSKAAGKLKSLKKTVERVTHTSKLKTNIPAGMAAAGPPLGPMLGQRAINIAAFCKDFNAKTAEMKEGVPLPCRISVNSDRSYELVIHHPPATFFLKQAAGIQRGTMTPGKEVAGMITLKHLYEIAAIKIQDPPNALLTMQQMCEMLISIARTCGIKVVKEIDPAAYGEFLEERKTIVEQQRRELQEKREAKMLRT 195

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BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1036746131|ref|XP_016950356.1| (PREDICTED: 39S ribosomal protein L11, mitochondrial [Drosophila biarmipes])

HSP 1 Score: 197.593 bits (501), Expect = 8.846e-61
Identity = 90/195 (46.15%), Postives = 133/195 (68.21%), Query Frame = 0

Query:    1 MSKGAGR--NIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLRT 193
            MSK AG+  ++++ + ++ H  K+  +IPA MA+  PPLG  LGQ  +NI  F +DFN KT+  K GVP+P  +++NSDRSY++ + HPP  + + QAAGIQRG M    EVAG IT +H+YEIA +K +DP   +  ++ +C+ ++  A   G++VV  IDP  Y EFL+ER+ I+ QQ+ +L+ KREAK+LRT
Sbjct:    1 MSKAAGKLKSLKKTVERVTHTSKLKTNIPAGMAAAGPPLGPMLGQRAINIAAFCKDFNAKTAEMKEGVPLPCRISVNSDRSYDLVIHHPPATFFLKQAAGIQRGTMTPGKEVAGMITLKHLYEIAAIKIQDPPNALLTMQQMCEMLISIARTCGIKVVREIDPAAYGEFLEERKTIVEQQRRELQEKREAKMLRT 195

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BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1228371791|ref|XP_021947025.1| (39S ribosomal protein L11, mitochondrial-like [Folsomia candida])

HSP 1 Score: 197.593 bits (501), Expect = 9.240e-61
Identity = 88/191 (46.07%), Postives = 131/191 (68.59%), Query Frame = 0

Query:    2 SKGAGRNIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLR 192
            SK   + +++V+ K+ HG  +  +IPA MAS  PPLG QLGQ G+NI  F +DFN +T   K G+P+P  +T+NSDRSY + + +PP  + + QAAG+QRG M    E+ G +T +H+YEIA++K +DP  +   L  IC+ ++  AH  G+QVV ++DP  YAEFL+ER+ +++QQ  +++ KREAKLLR
Sbjct:    6 SKQQLKGMKKVIQKVVHGNLVKIYIPAGMASTGPPLGPQLGQRGINIAAFCKDFNERTKDMKEGIPLPCRITVNSDRSYELVIHNPPVTFFLKQAAGVQRGVMKMGHEICGKLTLKHIYEIAKIKQQDPTLRFLPLERICNNVISTAHTCGIQVVRSLDPKEYAEFLEERKLVVIQQLQEIKEKREAKLLR 196

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BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|17737961|ref|NP_524351.1| (mitochondrial ribosomal protein L11 [Drosophila melanogaster] >gi|22001929|sp|Q9VFJ2.1|RM11_DROME RecName: Full=39S ribosomal protein L11, mitochondrial; Short=L11mt; Short=MRP-L11; Flags: Precursor >gi|7299888|gb|AAF55063.1| mitochondrial ribosomal protein L11 [Drosophila melanogaster] >gi|20151771|gb|AAM11245.1| RE67638p [Drosophila melanogaster] >gi|220948808|gb|ACL86947.1| mRpL11-PA, partial [synthetic construct] >gi|220958226|gb|ACL91656.1| mRpL11-PA [synthetic construct])

HSP 1 Score: 197.208 bits (500), Expect = 1.268e-60
Identity = 90/195 (46.15%), Postives = 134/195 (68.72%), Query Frame = 0

Query:    1 MSKGAGR--NIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLRT 193
            MSK AG+  ++++ + ++ H  K+  +IPA MA+  PPLG  LGQ  +NI  F +DFN KT+  K GVP+P  +++NSDRSY++++ HPP  + + QAAGIQRG M    EVAG IT +H+YEIA +K +DP   +  ++ +C+ ++  A   G++VV  IDP  Y EFL+ER+ I+ QQ+ +L+ KREAK+LRT
Sbjct:    1 MSKAAGKLKSLKKTVERVTHTSKLKTNIPAGMAAAGPPLGPMLGQRAINIAAFCKDFNAKTAEMKEGVPLPCRISVNSDRSYDLAIHHPPATFFLKQAAGIQRGTMTPGKEVAGMITLKHLYEIAAIKIQDPPNVLLTMQQMCEMLISIARTCGIKVVREIDPAAYGEFLEERKLIVEQQRRELQEKREAKMLRT 195

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BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|913321852|ref|XP_013192109.1| (PREDICTED: 50S ribosomal protein L11 [Amyelois transitella] >gi|913321854|ref|XP_013192110.1| PREDICTED: 50S ribosomal protein L11 [Amyelois transitella])

HSP 1 Score: 197.208 bits (500), Expect = 1.399e-60
Identity = 93/196 (47.45%), Postives = 133/196 (67.86%), Query Frame = 0

Query:    1 MSKGAGR--NIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLRTA 194
            MSK   R  ++++V  KI+H  K+  H+PA MA+P PPLG  LGQ  +NI  F +DFN +T+  KPG+P+P  V +N+DRSY +++  PP  Y +MQAAGI RGAM+   E +G IT +HVYEIA++KS+DP  +   L+ IC  ++  A   G++VV  ++   YAEFL+ER+  + +QK  L+ KREAK+LRTA
Sbjct:    1 MSKSVSRLKSMKKVADKIEHTSKLRTHVPAGMAAPGPPLGPMLGQRNINIAAFCKDFNERTANIKPGIPLPVRVKVNADRSYQLTIHQPPASYFLMQAAGINRGAMEPVRENSGKITFKHVYEIAKIKSQDPTLEWKPLKEICTMLLATARTCGIEVVKELNAEEYAEFLEERKKTVEEQKKLLQEKREAKMLRTA 196

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BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1037075807|ref|XP_016981584.1| (PREDICTED: 39S ribosomal protein L11, mitochondrial [Drosophila rhopaloa])

HSP 1 Score: 196.823 bits (499), Expect = 1.778e-60
Identity = 91/195 (46.67%), Postives = 134/195 (68.72%), Query Frame = 0

Query:    1 MSKGAGR--NIRQVMTKIDHGGKMFKHIPAQMASPAPPLGSQLGQIGVNINDFVRDFNLKTSVFKPGVPIPTYVTINSDRSYNMSLSHPPWPYLIMQAAGIQRGAMDKDVEVAGYITRRHVYEIARLKSEDPLWQMFDLRIICDKIVDYAHGMGVQVVDAIDPVWYAEFLQERQGIIVQQKADLEAKREAKLLRT 193
            MSK AG+  ++++ + ++ H  K+  +IPA MA+  PPLG  LGQ  +NI  F +DFN KT+  K GVP+P  +++NSDRS+++ + HPP  Y + QAAGIQRG M    EVAG IT +H+YEIA +K +DP   +  ++ +C+ ++  A   G++VV  IDPV Y EFL+ER+ I+ QQ+ +L+ KREAK+LRT
Sbjct:    1 MSKAAGKLKSLKKTVDRVTHTSKLKTNIPAGMAAAGPPLGPMLGQRAINIAAFCKDFNAKTAEMKEGVPLPCRISVNSDRSFDLVIHHPPATYFLKQAAGIQRGTMTPGKEVAGMITLKHLYEIASIKIQDPPNALLTMQQMCEMLICVARTCGIKVVKDIDPVAYGEFLEERKIIVEQQRRELQEKREAKMLRT 195

The following BLAST results are available for this feature:

BLAST of 39s ribosomal protein mitochondrial precursor vs. L. salmonis genes
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr

BLAST of 39s ribosomal protein mitochondrial precursor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAG00000002399	2.140e-71	53.13	supercontig:LSalAtl2s:LSalAtl2s145:1549404:1550032...	[more]

BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|22001929\|sp\|Q9VFJ2.1\|RM11_DROME	4.090e-63	46.15	RecName: Full=39S ribosomal protein L11, mitochond...	[more]
gi\|465702\|sp\|P34264.1\|RM11_CAEEL	1.649e-49	43.30	RecName: Full=Probable 39S ribosomal protein L11, ...	[more]
gi\|22001931\|sp\|Q9Y3B7.1\|RM11_HUMAN	7.927e-38	39.27	RecName: Full=39S ribosomal protein L11, mitochond...	[more]
gi\|81889859\|sp\|Q5XIE3.1\|RM11_RAT	8.797e-35	37.93	RecName: Full=39S ribosomal protein L11, mitochond...	[more]
gi\|190352209\|sp\|Q2YDI0.2\|RM11_BOVIN	2.535e-34	39.61	RecName: Full=39S ribosomal protein L11, mitochond...	[more]
gi\|22001924\|sp\|Q9CQF0.1\|RM11_MOUSE	3.823e-33	36.84	RecName: Full=39S ribosomal protein L11, mitochond...	[more]
gi\|254798454\|sp\|C0QQL2.1\|RL11_PERMH	5.194e-31	43.08	RecName: Full=50S ribosomal protein L11	[more]
gi\|226702788\|sp\|B2V7M4.1\|RL11_SULSY	1.605e-28	41.18	RecName: Full=50S ribosomal protein L11	[more]
gi\|74665573\|sp\|Q9UTK2.1\|RM19_SCHPO	2.454e-28	34.35	RecName: Full=54S ribosomal protein L19, mitochond...	[more]
gi\|166230151\|sp\|A1TYI6.1\|RL11_MARHV	1.335e-27	39.69	RecName: Full=50S ribosomal protein L11	[more]

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BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|675881960\|ref\|XP_009026482.1\|	2.365e-61	47.42	hypothetical protein HELRODRAFT_86877 [Helobdella ...	[more]
gi\|998499563\|ref\|XP_015509678.1\|	2.551e-61	48.13	PREDICTED: 39S ribosomal protein L11, mitochondria...	[more]
gi\|1036881840\|ref\|XP_017047122.1\|	4.498e-61	46.15	PREDICTED: 39S ribosomal protein L11, mitochondria...	[more]
gi\|665810340\|ref\|XP_008553587.1\|	5.718e-61	49.49	PREDICTED: 39S ribosomal protein L11, mitochondria...	[more]
gi\|1036980611\|ref\|XP_017076663.1\|	7.760e-61	46.15	PREDICTED: 39S ribosomal protein L11, mitochondria...	[more]
gi\|1036746131\|ref\|XP_016950356.1\|	8.846e-61	46.15	PREDICTED: 39S ribosomal protein L11, mitochondria...	[more]
gi\|1228371791\|ref\|XP_021947025.1\|	9.240e-61	46.07	39S ribosomal protein L11, mitochondrial-like [Fol...	[more]
gi\|17737961\|ref\|NP_524351.1\|	1.268e-60	46.15	mitochondrial ribosomal protein L11 [Drosophila me...	[more]
gi\|913321852\|ref\|XP_013192109.1\|	1.399e-60	47.45	PREDICTED: 50S ribosomal protein L11 [Amyelois tra...	[more]
gi\|1037075807\|ref\|XP_016981584.1\|	1.778e-60	46.67	PREDICTED: 39S ribosomal protein L11, mitochondria...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold90_size386344	supercontig	scaffold90_size386344:164708..166335 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	C:ribonucleoprotein complex

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold90_size386344-snap-gene-1.23-mRNA-1	maker-scaffold90_size386344-snap-gene-1.23-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold90_size386344:164708..166335-

gene from alignment at scaffold90_size386344:164708..166335-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold90_size386344-snap-gene-1.23 ID=maker-scaffold90_size386344-snap-gene-1.23|Name=39s ribosomal protein mitochondrial precursor|organism=Tigriopus kingsejongensis|type=gene|length=1628bp|location=Sequence derived from alignment at scaffold90_size386344:164708..166335- (Tigriopus kingsejongensis)
CGGAGCTCGGCTGAAGTCAACACTGTGCCCGAGGTGGAACGAGATCGGGG
ACCATGTCGAAAGGAGCCGGGCGCAACATCCGTCAGGTCATGACCAAGAT
CGACCACGGGGGCAAGATGTTCAAGCACATCCCCGCTCAAATGGCCTCAC
CCGCTCCGCCCTTGGGCTCCCAATTGGGACAGGTGAGCAGCGCCCTGGGC
CCATGAGCGCCAGACTTGCCTGGAGAGCCGGATGCGACCATGAACCATGA
GCCGGACGTGGGTGGGCCGAGCTCTCGATCATCGTCTCTGGCTGGCTCAT
GGAGCCGAAAAGGGGTGTATTGGGCTGGCGACTCCATGACAAAAAAAAAA
CCTAACGCATGCACTTATGGATAGGGGCGGACGGGTTTCTTAGGTTGCCG
ATGGCACGCATACTCGCGCGTTGGAGTTGGAGGGCGGTGTGCCCTCACCC
TCTATGATTCGGCTCACCCTCACCTAATCCGGGCGGTGGGGTCTGAACCA
ATGGCCGAGCTGAGCGGGGAGTGAGGCCGTCAGCCGCAATACAATGGGGA
TTGAATGGTGAAGTGGTCAGCGAAGAAGTCTGCCGTGCTGAAAGGCCGCA
GATCGATTCCCGGGCCCGACGGACAAAGAAATTTTCGCCGCGCCAGACTT
TCTTCGACTGCGGGGAGTGAATGACGACTCCCTGTAACCTGAGTCGTTCA
AAGGTCAGGAAAAACGGGTGCGGTCACATCTTGAGGAAAGGTCCCTTCTG
GTTCCCCACAAATTAAAGTAGTGGCTGGAGCTGGATTGTAAGGGGCTGCC
CGGCGACTAGCTACATTAGCTAATAACATCAGTGGGCCCCTGTGTTCACC
ATGGGGGTTCCCTGGTGTAGCACACGAAACCACCAGTAGGTGCGATTACA
CACACAACTTGAGCCTTACTTCCAGATCGGCGTCAACATCAACGACTTTG
TGCGCGACTTCAATCTCAAAACGTCCGTGTTCAAGCCGGGCGTGCCCATC
CCCACCTACGTGACCATCAACTCGGATCGCTCGTATAACATGAGCCTGAG
CCATCCGCCTTGGCCGTACTTGATTATGCAGGCGGCCGGCATCCAACGGG
GGGCCATGGACAAGGACGTGGAGGTGGCCGGCTACATCACCCGACGTCAC
GTGTACGAGATCGCCCGCCTCAAGTCCGAAGATCCGCTCTGGCAGATGTT
CGACCTCCGCATCATCTGCGACAAAATCGTCGACTATGCCCACGGCATGG
GTGTCCAGGTAGGCGGACCGGGCCTGCTGCCCGCCACGCCCTCGCGTAAC
TGACCCGGTTTTTGGCCTTGCAGGTGGTCGATGCCATCGATCCGGTCTGG
TATGCCGAGTTTCTCCAGGAGCGCCAAGGGATCATCGTCCAGCAAAAGGC
CGACCTGGAGGCCAAACGCGAGGCCAAACTCTTGCGAACCGCGCAAGCGG
CTGAGAAGGAGGCCAAGCGCGAAAAAGAATTGGCCCTTAAAGCCTAATGG
CCAAACGGCGGTTCGGGACCCGCCGCTAGGGTAGTGAATAGTGATAGGGT
ACGTGCCCTTCGTCGATTAAATCATTTATGTGCGAAACGATCGGTCAATG
TGTATTTACTGCCCGGCTCATACGGGAC

Synonyms

The feature '39s ribosomal protein mitochondrial precursor' has the following synonyms


Synonym
Tk12047

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