dead deah box helicase, maker-scaffold913_size81748-snap-gene-0.4 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000007141 (supercontig:LSalAtl2s:LSalAtl2s402:374905:376772:1 gene:EMLSAG00000007141 transcript:EMLSAT00000007141 description:"maker-LSalAtl2s402-augustus-gene-4.12") HSP 1 Score: 229.565 bits (584), Expect = 4.499e-70 Identity = 127/344 (36.92%), Postives = 197/344 (57.27%), Query Frame = 0 Query: 2 TPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIH-NIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMNNPEMVKVESTHDHSSIQ---QHFYKVEGTEARDDALELMLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDEYMDMPIE 341 + IQ S+ IL G+DVI Q ++G+GKTA F + +LQ++ Q LVL PTRELA Q+ K + LA G + N++ GG +G I L++G H++ GTPGR+ D + R + + LVLDEAD ML GF++ + V P Q L SAT P +I + + M +P +++ D +++ Q F VE E + D L + AV+FCNTK++V + +++ F+V +HGDM Q+ERD + +F + +L+ TDV ARG+DV + V N++L + E+++HRIGR+GR G KGVAI+F ++ + I++Y I+ Sbjct: 52 SAIQQRSIKPILKGRDVIAQAQSGTGKTATFSISILQSIDTTMRETQCLVLSPTRELAVQIQKVL--LALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVYDMIRRRTLRTRGIKMLVLDEADEMLNKGFKEQIYDVYRYLPPFTQIALISATLPHEILEMTSKFMADP--IRILVKRDELTLEGXKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDAIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIRILRDIEQYYSTQID 391
BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000000846 (supercontig:LSalAtl2s:LSalAtl2s1142:195200:196664:-1 gene:EMLSAG00000000846 transcript:EMLSAT00000000846 description:"augustus_masked-LSalAtl2s1142-processed-gene-1.9") HSP 1 Score: 219.935 bits (559), Expect = 1.026e-65 Identity = 125/335 (37.31%), Postives = 199/335 (59.40%), Query Frame = 0 Query: 2 TPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERER-IDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKD--RQTLLFSATFPKQIKSVADRIMNNPEMVKVESTHDHSSIQQHFYKVEGTEARDDALELMLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQID 333 + IQ ++P+ L G+D+IG +TGSGKTAAF L VLQ+L K R +LVL PTRELA Q++++ L + I +K + L GGM M Q L HI++ TPGR++DH+E + DL L L++DEADR+L M F+ +D ++ A P+ R+ +LFSAT K++ + + +P V+V S + +Y + ++ L ++ S ++F +T + L + GF+ I L+G M Q +R +L +F NK+ SIL+ATDVA+RGLD+ ++D V N+++ + ++HR+GRT RAG G AI+F + ++ +I+ Sbjct: 48 SKIQKEAIPVALTGRDIIGLAETGSGKTAAFALPVLQSLLEKPQRFFALVLTPTRELAYQISEQFEKLGKSI-GVKCVVLVGGMDMVSQALVLGKKPHIIIATPGRLIDHMENTKGFDLRSLKYLIMDEADRILNMDFEIEVDKILSALPRGEGRKNMLFSATMTKKVAKLQRASLRDPVRVEVSSKYQTVDKLLQYYLFIPLKYKEMYLVHIINELAGNSFIIFSSTCSGTLKLALLLRNLGFTAIPLNGQMSQNKRLASLNKFKNKSRSILIATDVASRGLDIPHVDVVINYDIPTHSKDYIHRVGRTARAGRSGRAITFVCQYDVELYQRIE 381
BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000005110 (supercontig:LSalAtl2s:LSalAtl2s26:913218:916036:-1 gene:EMLSAG00000005110 transcript:EMLSAT00000005110 description:"maker-LSalAtl2s26-augustus-gene-8.40") HSP 1 Score: 224.172 bits (570), Expect = 1.336e-65 Identity = 140/353 (39.66%), Postives = 203/353 (57.51%), Query Frame = 0 Query: 2 TPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVL---------------QNLRVKRFRVQSLVLCPTRELADQVAKEIRTLA-RGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIE----AAPKDRQTLLFSATFPKQIKSVADRIMNNPEMVKVESTHDHS-SIQQHFYKVEGTEARD---DALELMLLHHQPES------AVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEK 324 TP+Q ++P I +G+D++ +TGSGKTAAF + +L +N R K++ + +L+L PTRELA Q+ E + A R + ++ + GG + Q+ L+ G H+LV TPGR++D L+R +I L + LVLDEADRML+MGF+ + ++E RQTL+FSATFPK+I+ +A + N + V S +I Q V+ + R D LE L P +VF T+K +++ L GF V +HGD QRER+ AL +F + ILVAT VAARGLD+ N+ V NF+L D E +VHRIGRTGR G+ G+A SFF+++ Sbjct: 204 TPVQKHAIPAITNGRDLMACAQTGSGKTAAFLVPILNRIFEGGPPQPAPHSKNKRSKQYPM-ALILAPTRELATQIFDEAKKFAYRSL--VQPCVVYGGANVFEQMMDLDRGCHLLVATPGRLVDMLDRGKISLEQCKYLVLDEADRMLDMGFEPQIRKIVENDNMPPAGQRQTLMFSATFPKEIQMLARDFLANYIFLAVGRVGSTSENITQKIVWVDELDKRSFLLDLLEAAGLAKGPAGNEDSSLTLVFVETRKGADQLDEYLYKEGFPVTSIHGDRTQREREDALRRFRSGNTPILVATAVAARGLDIPNVKHVINFDLPSDVEEYVHRIGRTGRMGNLGLATSFFNDR 553
BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000010143 (supercontig:LSalAtl2s:LSalAtl2s66:712270:714003:-1 gene:EMLSAG00000010143 transcript:EMLSAT00000010143 description:"augustus_masked-LSalAtl2s66-processed-gene-7.1") HSP 1 Score: 216.083 bits (549), Expect = 8.760e-64 Identity = 128/334 (38.32%), Postives = 192/334 (57.49%), Query Frame = 0 Query: 2 TPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNL------RVKRFRVQSLVLCPTRELADQVAKEIRTLA-RGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMNNPEMVKVESTHDHS--SIQQHFYKVEGTEARDDALELMLLHHQPE-SAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKE 325 +PIQ + P +L G D+IG +TG+GKT AF L ++ R KR LVL PTRELA Q+A E++ RGI ++ V GG Q+ + G I++ TPGR+ D +E I + + LVLDEADRML+MGF+ + ++ DRQT++ SAT+P ++ +A M +P V + S + S+ Q + VE E +DD L + PE A++F + K +V + + L G +HG +Q +R+QAL+ F + IL+ATDVA+RG+DV+++ V NF+ E +VHRIGR+GRAG KG +ISF + ++ Sbjct: 13 SPIQCQAWPYLLKGLDLIGIAQTGTGKTLAFLLPSFIHIDSQSIPREKRGGPNVLVLSPTRELALQIADEVKKYEYRGIKSVCVY---GGGDRKAQVKVVTQGVQIVIATPGRLNDLIESGCIAVESITYLVLDEADRMLDMGFEPQIRKILLDVRPDRQTVMTSATWPPGVRRLASNYMKDPITVSIGSLDLAAVHSVTQKIFVVESEEEKDDRLLDFFNNMTPEDKAIIFMSKKAKVDDYSSSLCLAGVDCQSIHGGRDQMDREQALLDFKLGHVRILIATDVASRGIDVEDISHVINFDFPNSMEEYVHRIGRSGRAGKKGSSISFMTYRD 343
BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000011452 (supercontig:LSalAtl2s:LSalAtl2s790:154718:161369:1 gene:EMLSAG00000011452 transcript:EMLSAT00000011452 description:"maker-LSalAtl2s790-augustus-gene-1.30") HSP 1 Score: 218.779 bits (556), Expect = 9.358e-63 Identity = 122/338 (36.09%), Postives = 193/338 (57.10%), Query Frame = 0 Query: 2 TPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQ-----SLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMNNPEMVKVESTHDHSSIQQHFYKV--EGTEARDDALELMLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQI 332 TPIQ++ +P+ L G+D IG KTGSGKTA F ++ +++ +R + +L+L PTRELA Q+ E + + ++++ + GG Q E GA I + TPGR++D ++ + +L + LVLDEADRM +MGF+ + ++ + DRQTLLFSATF K+++ +A ++ +P V S + S KV +G + L+ ++ S ++F K + + L + F +HGD+ Q R++ + +F K ILVATDVAARGLD+ ++ V N++++RD + H HRIGRTGRAG KG A + +EK+ I Sbjct: 300 TPIQSIGIPVCLSGRDAIGIAKTGSGKTATFLWPIIIHIQHQRPLLNGEGPIALILVPTRELALQIYTEAKKFGK-VYDLNAVCAYGGGSKWEQSKCFESGAEIAIATPGRMIDMIKMKVTNLQRVTYLVLDEADRMFDMGFEAQVRSICDHVRPDRQTLLFSATFKKKVEKLARDVLTDPIKVVQGSIGEASEDVTQIVKVLEKGGYKWEWVLQNLVEFTSAGSVLIFVTKKLNCEELAQNLKLKEFECELIHGDLNQHVRNEIIYKFKKKQFPILVATDVAARGLDIPHIRTVLNYDIARDIDTHTHRIGRTGRAGIKGTAYTLVTEKDKEFAGHI 636
BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000004918 (supercontig:LSalAtl2s:LSalAtl2s259:1039310:1040989:-1 gene:EMLSAG00000004918 transcript:EMLSAT00000004918 description:"maker-LSalAtl2s259-augustus-gene-10.16") HSP 1 Score: 210.305 bits (534), Expect = 1.784e-61 Identity = 129/343 (37.61%), Postives = 196/343 (57.14%), Query Frame = 0 Query: 2 TPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFR----VQS----LVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMNNPEMVKV--ESTHDHSSIQQHFYKVEGTEARDDALELML--LHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQI 332 TPIQ+++ P++ G+DVIG +TGSGKT AF + L ++ ++ R V S L++ PTRELA Q + + + I K L + GG+ Q SL+ G ILV TPGR+LD E +DLS ++ +VLDEADRML+ GF+ + ++ K+RQT LFSAT+P I+ +A + +P V + E ++ Q +V +RD ++ +L H + ++F K+E + + L H ++ +HGD Q R QA+ F + I IL+ATDVAARGLD+ +++ V N+ E +VHRIGRTGRAG G+A +FF + R ++ Sbjct: 132 TPIQSMTWPVVASGRDVIGIAETGSGKTLAFSVPALAHISERKQRPVKGVNSMPIMLIVAPTRELAMQSQVVLESAGKEI-GFKSLCVYGGVNKYAQRQSLKSGVEILVATPGRLLDLAEEGCVDLSGVSYVVLDEADRMLDQGFEQDIRRILGQTHKERQTCLFSATWPDSIRKLAHEFLKSPIKVTIGSEDLAAGKTVTQ-IVEVVDERSRDGKIKGLLNKYHKKKNRILIFVLYKREADRLWNSLKHE-WNCTTIHGDKSQDARIQAVENFKSGKIPILIATDVAARGLDIPDVEYVLNYSFPLTIEDYVHRIGRTGRAGKSGIAHTFFHLGDKARAGEL 471
BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000002581 (supercontig:LSalAtl2s:LSalAtl2s151:1305107:1306803:-1 gene:EMLSAG00000002581 transcript:EMLSAT00000002581 description:"maker-LSalAtl2s151-snap-gene-13.39") HSP 1 Score: 204.142 bits (518), Expect = 2.629e-59 Identity = 138/378 (36.51%), Postives = 203/378 (53.70%), Query Frame = 0 Query: 2 TPIQALSLPIILDGKDVIGQGKTGSGKTAAF---GLGVLQNLRVKRFRVQS---LVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMNNPEM--VKVESTHDHSS--IQQHFYKVEGTEARDDALELM--LLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQ------IDEYMDMP---IEPSQLPAKPIAKPYYSNM 358 T IQA PI +GK++I G+TGSGKT F GL L +R R L++ PTRELA+Q+ + A I L GG QI L GA I+V TPGR++D +E +DL + +VLDEADRML+MGF+ + ++ DRQ L++SAT+P +++S+A + V + S+ ++ I Q F E E D E++ L + + ++F TK V + +L + F V +HGD Q R +AL +F + I+ILVATDVA+RGLDV+++ V N++ + E +VHRIGRTGR +G + SFF E E A+ + + +P E S++ KP K + SN Sbjct: 102 TAIQAQGWPIATNGKNIIAIGETGSGKTLGFVLPGLCHLMRXPPRRNRGDGPVVLIIAPTRELAEQIHNVVDGFA---SKIPTACLVGGNHKQGQIRDLNRGAEIVVATPGRLIDLMEDGDVDLKRCSYMVLDEADRMLDMGFEPQIRKIMRQVRPDRQLLMWSATWPSEVQSLAHDFFGGTDYAHVNIGSSELXANKLIMQDFKFCERFEKMDSIKEILESLSEVESKKVLIFAATKIRVDQLVRKLKYWNFVVDGIHGDKTQAMRTRALDKFRSGRINILVATDVASRGLDVNDIKVVINYDFPNNIEDYVHRIGRTGRCSKEGKSFSFFDEVEDGSKAKDLINVLKEAHQSIPHKLQEISRMSYKPKKKQFKSNF 476
BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000011390 (supercontig:LSalAtl2s:LSalAtl2s787:174367:180499:1 gene:EMLSAG00000011390 transcript:EMLSAT00000011390 description:"augustus_masked-LSalAtl2s787-processed-gene-0.30") HSP 1 Score: 210.305 bits (534), Expect = 3.517e-59 Identity = 128/367 (34.88%), Postives = 202/367 (55.04%), Query Frame = 0 Query: 2 TPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQ-----SLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERER---IDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMNNPEMVKVESTHDHSS-----IQQHFYKVEGTEARDDALELMLLHHQPESAVVFCNTKKEVQNV-NDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDEYMDMPIEPSQLPAKPIAKPY 354 TPIQ ++PII+ G+D+IG KTGSGKT AF L + +++ + + ++++ PTREL Q+ KEI+ ++ I + + + GG + QI L+ GA I+V TPGR++D L + + +VLDEADRM +MGF+ + +I+ D+Q ++FSATFP+Q++++A RI+ P VE T S I Q Y +E LEL+ ++F + ++ ++ D +S S LHG ++Q +RD + F N + ILVAT VAARGLDV L V N++ E +VHR GRTGRAG+ G A +F + ++ ++ + M++ P K + + Y Sbjct: 246 TPIQTQAIPIIMSGRDMIGIAKTGSGKTLAFLLPLFRHIMAQPELEEGDGPIAIIMTPTRELCMQIGKEIKKFSKAIKGARSVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNCRRITYVVLDEADRMFDMGFEPQVSRIIDNCRPDKQMVMFSATFPRQMEALARRILCKP----VEVTVGGRSVVCKDIDQSVYVLEEEHKFLKLLELLGQRSSEGLIIIFVDKQEHADSLLKDLMSASYTSCASLHGGVDQYDRDSIITNFKNGKVKILVATSVAARGLDVKELVLVVNYDCPNHYEDYVHRCGRTGRAGNSGFAATFLTPEQGRYAGEVIKAMELSDAVVPAPLKDLWEKY 608
BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000011189 (supercontig:LSalAtl2s:LSalAtl2s760:470421:474651:1 gene:EMLSAG00000011189 transcript:EMLSAT00000011189 description:"maker-LSalAtl2s760-augustus-gene-3.33") HSP 1 Score: 208.764 bits (530), Expect = 6.022e-59 Identity = 122/353 (34.56%), Postives = 199/353 (56.37%), Query Frame = 0 Query: 2 TPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQS-----LVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMNNPEMVKVEST--HDHSSIQQHFYKVEGTEARDDALELM-LLHHQPESAV-VFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDEYMDMPIEPSQL 345 T IQ+ PI L G +++G TGSGKT + L + ++ + + + LVL PTRELA Q+ + R IK + GG P GPQ+ LE G I++ TPGR++D LE +I++ LVLDEADRML+MGF+ + +IE DRQ L++SAT+PK+++ +A+ +++ + + + H + +I Q E + + L+ + +P + + +F TK++ + + G+ + +HGD +Q+ERD L +F + +IL ATDVAARGLDVD++ V N++ + E ++HRIGRTGR G A + F+ A+ + +D+ +E Q+ Sbjct: 139 TAIQSQGWPIALSGSNMVGIAMTGSGKTCGYLLPGIIHVNNQPYLEEGDGPIVLVLAPTRELAQQIQEVASEFGR-TSRIKSTCIFGGAPKGPQLRDLERGCEIVIATPGRLIDILEMGKINMRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRRLAEDFLDDYVHINIGAATLHANHNILQIVDVCEDFQKEEKLARLLEEIGCEPHNKILIFVETKRKADELTRLMRRDGYPAMCIHGDKQQKERDWVLGEFKHGATTILXATDVAARGLDVDDVKFVINYDYPNNSEDYIHRIGRTGRKDRTGTAYTLFTSGNS---AKAKDLVDVLLEAKQV 487
BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000006912 (supercontig:LSalAtl2s:LSalAtl2s391:287461:291724:1 gene:EMLSAG00000006912 transcript:EMLSAT00000006912 description:"maker-LSalAtl2s391-augustus-gene-3.7") HSP 1 Score: 192.971 bits (489), Expect = 4.130e-56 Identity = 119/341 (34.90%), Postives = 189/341 (55.43%), Query Frame = 0 Query: 2 TPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMNNPEMVKVESTH-DHSSIQQHFYKVEGTEARDDALELMLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDEYMDMPIE 341 + IQ ++ + +D I Q ++G+GKTA F + +LQ + + R Q+L+L PTRELA Q+ K + +L + GG + I +LEHG HI+VGTPGR+ D + RE + + VLDEAD ML GF++ + V +D Q +L SAT P + V R M +P + V I Q + VE E + L + AV+FCNT+++V + +++ + F+V +HG+M Q ER+ + +F + + +L+ TD+ ARG+DV + V N++L + E ++HRIGR GR G KGVAI+F +E + + I+++ IE Sbjct: 64 SAIQQRAIVPCIKTRDAIAQAQSGTGKTATFSIAILQKIDISMNRTQALILAPTRELAQQIQKVVLSLGDFL-KATCYACIGGRSISSDIRALEHGPHIVVGTPGRVFDMITREHLRTENIKMFVLDEADEMLSRGFKEQIYDVFRHLNQDIQVVLMSATMPDDVLDVTKRFMRDPIRILVRKEELTLEGILQFYVFVEKEEWKLSTLCDLYETLTITQAVIFCNTRRKVCWLTEKMGLKHFTVSSMHGEMSQEEREVIMREFRSGSSRVLITTDLLARGIDVQQISLVINYDLPVNKENYIHRIGRGGRFGRKGVAINFITEGDRMALQDIEKHYHTQIE 403
BLAST of dead deah box helicase vs. SwissProt
Match: gi|416881|sp|P21693.2|DBPA_ECOLI (RecName: Full=ATP-dependent RNA helicase DbpA) HSP 1 Score: 407.142 bits (1045), Expect = 1.311e-136 Identity = 200/367 (54.50%), Postives = 260/367 (70.84%), Query Frame = 0 Query: 1 MTPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMNNPEMVKVESTHDHSSIQQHFYKVEGTEARDDALELMLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDEYMDMPIEPSQLPAKPIAKPYYSNMVTIQIDGGQ 367 MTP+QA +LP IL GKDV Q KTGSGKTAAFGLG+LQ + F+ Q+LVLCPTRELADQVA E+R LAR + N K+LTLCGG P G Q SL+H HI+V TPGR+LDHL++ + L LNTLV+DEADRML+MGF DA+D VI AP RQTLLFSAT+P+ I +++ R+ +P ++++ST I+Q FY+ ++ + L+ +L HQP S VVFCNTKK+ Q V D L+ G S + LHGD+EQR+RDQ LV+F+N + +LVATDVAARGLD+ +L+ V NFEL+ DPEVHVHRIGRT RAG+ G+AISF + +E R I + + + + PA + M T+ IDGG+ Sbjct: 26 MTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETS-SKGKIPLLQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTPPANSSIATLEAEMATLCIDGGK 391
BLAST of dead deah box helicase vs. SwissProt
Match: gi|81675946|sp|Q5L3G9.1|CSHA_GEOKA (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA) HSP 1 Score: 300.442 bits (768), Expect = 6.351e-95 Identity = 154/346 (44.51%), Postives = 232/346 (67.05%), Query Frame = 0 Query: 2 TPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMNNPEMVKVESTH-DHSSIQQHFYKVEGTEARDDALELMLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDEYMDMPIEPSQLP 346 TPIQA ++P+ L KDVIGQ +TG+GKTAAFG+ +++ + VK VQ+LV+ PTRELA QV++E+ + + ++VL + GG + QI +L+ H++VGTPGRI+DH+ R + L ++T+VLDEAD ML MGF + ++A++ P +RQTLLFSAT P I+ +A+R MN PE+VKV++ +IQQ++ +V + + D L +L PE A+VF TK+ V + + L+ RG++ +HGD+ Q +R L +F I ILVATDVAARGLD+ + V+NF++ +DPE +VHRIGRTGRAG GVA++F + +E+ ++ I+ +E + P Sbjct: 26 TPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEKVNVKNSAVQALVVAPTRELAIQVSEELYKIG-AVKRVRVLPIYGGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLLFSATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVH-EKKKFDILTRLLDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHIERTTKRKMERMKPP 369
BLAST of dead deah box helicase vs. SwissProt
Match: gi|81837388|sp|Q81DF9.1|CSHE_BACCR (RecName: Full=DEAD-box ATP-dependent RNA helicase CshE) HSP 1 Score: 298.516 bits (763), Expect = 2.650e-94 Identity = 153/342 (44.74%), Postives = 225/342 (65.79%), Query Frame = 0 Query: 2 TPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMNNPEMVKVESTH-DHSSIQQHFYKVEGTE-ARDDALELMLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDEYMDMPIE 341 TPIQ ++P+IL GKD+IGQ KTG+GKT AF L +L+ + + VQ+L++ PTRELA Q+ EI+ + +I VL + GG + Q+ L+ HI+V TPGR+LDH+ RE IDLS L+T+VLDEAD+ML GF ++ +++ P +QT+LFSAT PK IK +A R M+ P+M++V+S +I+Q +E T+ A+ DAL ++ QP AV+FC TK + D L G++ ELHGD+ Q +R++ + F I L+ATDVAARGLDVD + VFN+++ D E ++HRIGRTGRAG G+AI+F + K+ + +I++ + PI+ Sbjct: 29 TPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKIDPECSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRV--IETTDRAKPDALRFVMDRDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIEKTLGAPIQ 368
BLAST of dead deah box helicase vs. SwissProt
Match: gi|81768862|sp|Q8Y8N0.1|CSHA_LISMO (RecName: Full=ATP-dependent RNA helicase CshA) HSP 1 Score: 298.516 bits (763), Expect = 1.353e-93 Identity = 154/346 (44.51%), Postives = 228/346 (65.90%), Query Frame = 0 Query: 2 TPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMNNPEMVKVESTHDHSS-IQQHFYKVEGTEARDDALELMLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDEYMDMPIEPSQLP 346 TPIQ ++P+ L+GKD+IGQ +TG+GKTAAFGL ++ + K VQ+L++ PTRELA QV++E+ L+ H ++VL + GG + QI SL+ I+VGTPGRILDH+ R + L + TLVLDEAD ML MGF D ++ +++ P +RQTLLFSAT P I+ + +R M++PE++++++ + I+Q F KV E + D L +L PE A+VF TK+ V ++ L RG+ +HGD+ Q +R L +F I +LVATDVAARGLD+ + V+N+++ +DPE +VHRIGRTGRAG +G+AI+F +EM + ++E ++P Q P Sbjct: 26 TPIQEKTIPLGLEGKDLIGQAQTGTGKTAAFGLPMIHKIDQKSNNVQALIIAPTRELAIQVSEELYKLSYDKH-VRVLAVYGGSDISRQIRSLKKNPQIVVGTPGRILDHINRRTLKLDHVETLVLDEADEMLNMGFIDDIETILKEVPAERQTLLFSATMPDPIRRIGERFMHSPELIRIKAKEMTALLIEQFFVKVHEKE-KFDVLSRLLDVQAPELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGKIDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKEGMAITFVQPREMGYLRIVEETTKKRMQPLQAP 369
BLAST of dead deah box helicase vs. SwissProt
Match: gi|134039178|sp|P96614.2|CSHA_BACSU (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA) HSP 1 Score: 294.664 bits (753), Expect = 1.972e-92 Identity = 153/346 (44.22%), Postives = 225/346 (65.03%), Query Frame = 0 Query: 2 TPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMNNPEMVKVESTHDHSSIQQHFYKVEGTEARDDALELMLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDE----YMDMPIEPS 343 TPIQA ++P+ L KDVIGQ +TG+GKTAAFG+ +++ + + +Q++V+ PTRELA QV++E+ + + KVL + GG +G QI +L+ +I+VGTPGR+LDH+ R I L+ +NT+V+DEAD ML MGF D +++++ P + QTLLFSAT P IK +A+R M PE VKV++ S Q FY + D L +L PE A+VF TK+ V + + L+ RG++ +HGD+ Q +R AL +F I +LVATDVAARGLD+ + V+NF++ +DPE +VHRIGRTGRAG G+A++F + +E + I++ MD EP+ Sbjct: 27 TPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQD-KRAKVLPIYGGQDIGRQIRALKKNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERKKFDTLTRLLDIQSPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKSMLRAIEQTTKRKMDRMKEPT 371
BLAST of dead deah box helicase vs. SwissProt
Match: gi|123643052|sp|Q49Z29.1|CSHA_STAS1 (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA) HSP 1 Score: 294.664 bits (753), Expect = 3.007e-92 Identity = 150/334 (44.91%), Postives = 222/334 (66.47%), Query Frame = 0 Query: 2 TPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKD-RQTLLFSATFPKQIKSVADRIMNNPEMVKVESTHDHSSIQQHFYKVEGTEARDDALELMLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDE 334 TPIQ S+P+ L+GKDV+GQ +TG+GKT AFG+ +++ + + VQSL+L PTRELA QVA+ ++ A+G NI+V+T+ GGMP+ QI +L+ G I+VGTPGR++DHL R + ++++TL+LDEAD M+ MGF D + +++ P + RQT+LFSAT PK I+++ + M +P +VK + + +Y + + D L HQPE A+VF TK+ V + L +G+ LHGD+ Q +R + L +F N + ILVATDVAARGLD+ + V+NF++ +D E + HRIGRTGRAG KGVAI+F + EM + QI++ Sbjct: 26 TPIQKESIPLALEGKDVLGQAQTGTGKTGAFGIPLIEKV-ADQEGVQSLILAPTRELAMQVAESLKAFAKG-QNIQVVTVFGGMPIDRQIKALKKGPQIVVGTPGRVIDHLNRRTLKTNDIHTLILDEADEMMNMGFIDDMKFIMDKIPAEQRQTMLFSATMPKAIQTLVQQFMKSPVIVKTMNNEMSDPQIEEYYTIVKELEKFDTFTSFLDVHQPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQLDILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKKGVAITFVNPIEMDYIRQIEQ 357
BLAST of dead deah box helicase vs. SwissProt
Match: gi|81691189|sp|Q65N62.1|CSHA_BACLD (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA) HSP 1 Score: 293.508 bits (750), Expect = 5.466e-92 Identity = 150/345 (43.48%), Postives = 224/345 (64.93%), Query Frame = 0 Query: 2 TPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMNNPEMVKVESTHDHSSIQQHFYKVEGTEARDDALELMLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDEYMDMPIEPSQLP 346 TPIQA ++P+ L KDVIGQ +TG+GKTAAFG+ +++ + + +Q++V+ PTRELA QV++E+ + + +VL + GG +G QI +L+ HI+VGTPGR+LDH+ R + L +NT+VLDEAD ML MGF + +++++ P + QTLLFSAT P IK +A+R M NPE VKV++ S Q FY + D L +L PE A+VF TK+ V + + L+ RG++ +HGD+ Q +R AL +F I +LVATDVAARGLD+ + V+NF++ +DPE +VHRIGRTGRAG G+A++F + +E + I++ ++ + P Sbjct: 27 TPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQD-KRARVLPIYGGQDIGRQIRALKKNPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAEHQTLLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERKKFDTLTRLLDIQSPELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKDMLRAIEQTTKRKMDRMKAP 370
BLAST of dead deah box helicase vs. SwissProt
Match: gi|61223743|sp|P0A4D7.1|CSHA_STRPN (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA >gi|61223744|sp|P0A4D8.1|CSHA_STRR6 RecName: Full=DEAD-box ATP-dependent RNA helicase CshA; AltName: Full=Exported protein 9) HSP 1 Score: 293.123 bits (749), Expect = 1.778e-91 Identity = 149/326 (45.71%), Postives = 217/326 (66.56%), Query Frame = 0 Query: 2 TPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMNNPEMVKVESTHDHSS-IQQHFYKVEGTEARDDALELMLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEM 326 +PIQ ++P+ L+GKDVIGQ +TG+GKTAAFGL L+ +R + +Q+LV+ PTRELA Q +E+ R +KV ++ GG + QI +L+ GAHI+VGTPGR+LD ++R+ + L ++ TL+LDEAD ML MGF + ++A+I P++RQTLLFSAT P IK + + M PE VK+ + + + Q++ +V+ E D LM + QPE A+VF TK+ V + L RGF +HGD++Q +R + L F N + +LVATDVAARGLD+ + V+N+++ +DPE +VHRIGRTGRAG G +I+F + EM Sbjct: 25 SPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLEKIRTEEATIQALVIAPTRELAVQSQEELFRFGRS-KGVKVRSVYGGSSIEKQIKALKSGAHIVVGTPGRLLDLIKRKALKLQDIETLILDEADEMLNMGFLEDIEAIISRVPENRQTLLFSATMPDAIKRIGVQFMKAPEHVKIAAKELTTELVDQYYIRVKEQEKFDTMTRLMDVA-QPELAIVFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQNKRLRVLRDFKNGNLDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVAPNEM 348
BLAST of dead deah box helicase vs. SwissProt
Match: gi|123660708|sp|Q4L7W0.1|CSHA_STAHJ (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA) HSP 1 Score: 291.582 bits (745), Expect = 4.482e-91 Identity = 147/334 (44.01%), Postives = 222/334 (66.47%), Query Frame = 0 Query: 2 TPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKD-RQTLLFSATFPKQIKSVADRIMNNPEMVKVESTHDHSSIQQHFYKVEGTEARDDALELMLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDE 334 TPIQ S+P L+GKD++GQ +TG+GKT AFG+ +++ + V + VQ+L+L PTRELA QVA+++R +RG N++V+T+ GGMP+ QI +L+ G I+VGTPGR++DHL R + + ++TL+LDEAD M+ MGF D + +++ P + RQT+LFSAT PK I+++ + M +P++VK + +Y + + D L HQPE A+VF TK+ V + L +G+ LHGD+ Q +R + L +F N I ILVATDVAARGLD+ + V+NF++ +D E + HRIGRTGRAG +G+A++F + EM + QI++ Sbjct: 26 TPIQKDSIPYTLEGKDILGQAQTGTGKTGAFGIPLIEKV-VGQSGVQALILAPTRELAMQVAEQLREFSRG-QNVQVVTVFGGMPIDRQIKALKRGPQIVVGTPGRVIDHLNRRTLKTNGIHTLILDEADEMMNMGFIDDMRFIMDKIPAEQRQTMLFSATMPKAIQTLVQQFMKSPQIVKTMNNEMSDPQIDEYYTIVKELEKFDTFTNFLDVHQPELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIED 357
BLAST of dead deah box helicase vs. SwissProt
Match: gi|81696998|sp|Q6HPE6.1|CSHA_BACHK (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA >gi|81715465|sp|Q81VG0.1|CSHA_BACAN RecName: Full=DEAD-box ATP-dependent RNA helicase CshA >gi|134039177|sp|A0R8U6.1|CSHA_BACAH RecName: Full=DEAD-box ATP-dependent RNA helicase CshA) HSP 1 Score: 288.886 bits (738), Expect = 7.992e-90 Identity = 152/347 (43.80%), Postives = 227/347 (65.42%), Query Frame = 0 Query: 2 TPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHN-IKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMNNPEMVKVESTH-DHSSIQQHFYKVEGTEARDDALELMLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQID-------EYMDMP 339 TPIQA ++P L GKD+IGQ +TG+GKTAAFGL +L + + VQ +V+ PTRELA QV +E+ + G H +++L + GG + QI +L+ HI+VGTPGRILDH+ R+ + L + T+VLDEAD ML MGF + ++A++ P+ QTLLFSAT P I+ +A+R M P+ +KV++ +IQQ + +V+ + + D L +L PE A+VF TK+ V +++ L+ RG++ +HGD+ Q +R L +F +I +LVATDVAARGLD+ + V+NF++ +DPE +VHRIGRTGRAG KG+A+ F + +E ++ I+ + MD P Sbjct: 26 TPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKI--GKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQ-EKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAP 369
BLAST of dead deah box helicase vs. nr
Match: gi|515170407|ref|WP_016798854.1| (ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1045772432|gb|OCH51234.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus]) HSP 1 Score: 754.592 bits (1947), Expect = 0.000e+0 Identity = 360/367 (98.09%), Postives = 365/367 (99.46%), Query Frame = 0 Query: 1 MTPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMNNPEMVKVESTHDHSSIQQHFYKVEGTEARDDALELMLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDEYMDMPIEPSQLPAKPIAKPYYSNMVTIQIDGGQ 367 MTPIQALSLP ILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLE++R+DLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIM NPEMVKVESTHDHSSIQQHFYKVEGTEARDDALEL+LLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDEYMDMPIEPSQLPAKPIAKPYYSNMVTIQIDGG+ Sbjct: 27 MTPIQALSLPTILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLEKDRVDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMRNPEMVKVESTHDHSSIQQHFYKVEGTEARDDALELLLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDEYMDMPIEPSQLPAKPIAKPYYSNMVTIQIDGGK 393
BLAST of dead deah box helicase vs. nr
Match: gi|515162563|ref|WP_016791114.1| (ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1040456826|gb|OBT29801.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1045763205|gb|OCH42386.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1067289455|gb|OED68709.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus ZF99] >gi|1067312135|gb|OED90562.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus ZF30] >gi|1067337541|gb|OEE15473.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus ZF205] >gi|1067341003|gb|OEE18800.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus ZF207] >gi|1067349489|gb|OEE27122.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus ZF170] >gi|1067410189|gb|OEE83789.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus FF160] >gi|1326267645|gb|PME73232.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326269189|gb|PME74755.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326290964|gb|PME95883.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326306315|gb|PMF10162.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326328837|gb|PMF31829.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326341286|gb|PMF44106.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326619073|gb|PMI09059.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326735380|gb|PMJ15761.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326760896|gb|PMJ40345.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326765016|gb|PMJ44311.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326776363|gb|PMJ54930.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326827625|gb|PMK04197.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1327394744|gb|PMP53155.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus]) HSP 1 Score: 754.592 bits (1947), Expect = 0.000e+0 Identity = 361/367 (98.37%), Postives = 365/367 (99.46%), Query Frame = 0 Query: 1 MTPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMNNPEMVKVESTHDHSSIQQHFYKVEGTEARDDALELMLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDEYMDMPIEPSQLPAKPIAKPYYSNMVTIQIDGGQ 367 MTPIQALSLP ILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLE+ERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIM NPEMVKVESTHDHSSIQQHFYKVEGTEARDDALEL+LLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEM+RVAQIDEYMDMPIEPSQLPAKPIAKPYYSNMVTIQIDGG+ Sbjct: 27 MTPIQALSLPTILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLEKERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMRNPEMVKVESTHDHSSIQQHFYKVEGTEARDDALELLLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMYRVAQIDEYMDMPIEPSQLPAKPIAKPYYSNMVTIQIDGGK 393
BLAST of dead deah box helicase vs. nr
Match: gi|515157819|ref|WP_016786419.1| (MULTISPECIES: ATP-dependent RNA helicase DbpA [Vibrio] >gi|548711917|gb|ERM58045.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus FF75] >gi|910833061|gb|KNH11077.1| DEAD/DEAH box helicase [Vibrio lentus] >gi|1040429149|gb|OBT02606.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1040432805|gb|OBT06232.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1067301415|gb|OED80309.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus ZF65] >gi|1067327702|gb|OEE05816.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus ZF28] >gi|1067370898|gb|OEE47174.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus FF75] >gi|1067460888|gb|OEF30723.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus 1F97] >gi|1067469940|gb|OEF39576.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus 1F273] >gi|1067470537|gb|OEF40155.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus 1F289] >gi|1326201803|gb|PME10024.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326210705|gb|PME18702.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326212280|gb|PME20250.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326213613|gb|PME21561.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326233579|gb|PME40937.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326244691|gb|PME51424.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326248380|gb|PME54711.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326279672|gb|PME84955.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326310801|gb|PMF14412.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326320536|gb|PMF23755.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326340697|gb|PMF43518.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326356442|gb|PMF58896.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326359611|gb|PMF61832.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326407406|gb|PMG07468.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326490664|gb|PMG86941.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326527529|gb|PMH22767.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326547051|gb|PMH41935.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326554165|gb|PMH48881.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326564073|gb|PMH58653.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326657072|gb|PMI45063.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326683313|gb|PMI68215.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326754283|gb|PMJ33984.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326793686|gb|PMJ71831.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326817252|gb|PMJ94408.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326846677|gb|PMK22489.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326904595|gb|PMK78804.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1327157478|gb|PMN23200.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1327249676|gb|PMO12724.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1327356301|gb|PMP15861.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1327364473|gb|PMP23831.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus]) HSP 1 Score: 753.051 bits (1943), Expect = 0.000e+0 Identity = 360/367 (98.09%), Postives = 365/367 (99.46%), Query Frame = 0 Query: 1 MTPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMNNPEMVKVESTHDHSSIQQHFYKVEGTEARDDALELMLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDEYMDMPIEPSQLPAKPIAKPYYSNMVTIQIDGGQ 367 MTPIQALSLP ILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLE++RIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIM NPEMVKVESTHDHSSIQQHFYKVEGTEARDDALEL+LLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEM+RVAQIDEYMDMPIEPSQLPAKPIAKPYYSNMVTIQIDGG+ Sbjct: 27 MTPIQALSLPTILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLEKDRIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMRNPEMVKVESTHDHSSIQQHFYKVEGTEARDDALELLLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMYRVAQIDEYMDMPIEPSQLPAKPIAKPYYSNMVTIQIDGGK 393
BLAST of dead deah box helicase vs. nr
Match: gi|515675268|ref|WP_017107868.1| (MULTISPECIES: ATP-dependent RNA helicase DbpA [Vibrio] >gi|1045778588|gb|OCH56982.1| ATP-dependent RNA helicase DbpA [Vibrio lentus] >gi|1326240001|gb|PME46987.1| ATP-dependent RNA helicase DbpA [Vibrio lentus] >gi|1326249138|gb|PME55412.1| ATP-dependent RNA helicase DbpA [Vibrio lentus] >gi|1326274434|gb|PME79851.1| ATP-dependent RNA helicase DbpA [Vibrio lentus] >gi|1326472437|gb|PMG69272.1| ATP-dependent RNA helicase DbpA [Vibrio lentus] >gi|1326599652|gb|PMH90857.1| ATP-dependent RNA helicase DbpA [Vibrio lentus] >gi|1326622519|gb|PMI12252.1| ATP-dependent RNA helicase DbpA [Vibrio lentus] >gi|1326669039|gb|PMI55483.1| ATP-dependent RNA helicase DbpA [Vibrio lentus] >gi|1326675796|gb|PMI61367.1| ATP-dependent RNA helicase DbpA [Vibrio lentus] >gi|1326701178|gb|PMI84071.1| ATP-dependent RNA helicase DbpA [Vibrio lentus] >gi|1326704642|gb|PMI87217.1| ATP-dependent RNA helicase DbpA [Vibrio lentus] >gi|1326722438|gb|PMJ03303.1| ATP-dependent RNA helicase DbpA [Vibrio lentus] >gi|1326744019|gb|PMJ24023.1| ATP-dependent RNA helicase DbpA [Vibrio lentus] >gi|1326911527|gb|PMK85618.1| ATP-dependent RNA helicase DbpA [Vibrio lentus]) HSP 1 Score: 752.666 bits (1942), Expect = 0.000e+0 Identity = 359/367 (97.82%), Postives = 365/367 (99.46%), Query Frame = 0 Query: 1 MTPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMNNPEMVKVESTHDHSSIQQHFYKVEGTEARDDALELMLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDEYMDMPIEPSQLPAKPIAKPYYSNMVTIQIDGGQ 367 MTPIQALSLP ILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLE++RIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPK+RQTLLFSATFPKQIKSVADRIM NPEMVKVESTHDHSSIQQHFYKVEGTEARDDALEL+LLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDEYMDMPIEPSQ+PAKPIAKPYYSNMVTIQIDGG+ Sbjct: 27 MTPIQALSLPTILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLEKDRIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKERQTLLFSATFPKQIKSVADRIMRNPEMVKVESTHDHSSIQQHFYKVEGTEARDDALELLLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDEYMDMPIEPSQMPAKPIAKPYYSNMVTIQIDGGK 393
BLAST of dead deah box helicase vs. nr
Match: gi|1330040161|ref|WP_102291978.1| (ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus] >gi|1326452465|gb|PMG49972.1| ATP-dependent RNA helicase DbpA [Vibrio cyclitrophicus]) HSP 1 Score: 752.281 bits (1941), Expect = 0.000e+0 Identity = 359/367 (97.82%), Postives = 365/367 (99.46%), Query Frame = 0 Query: 1 MTPIQALSLPIILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQIKSVADRIMNNPEMVKVESTHDHSSIQQHFYKVEGTEARDDALELMLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDEYMDMPIEPSQLPAKPIAKPYYSNMVTIQIDGGQ 367 MTPIQALSLP ILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLE++RIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQ+KSVADRIM NPEMVKVESTHDHSSIQQHFYKVEGTEARDDALEL+LLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEM+RVAQIDEYMDMPIEPSQLPAKPIAKPYYSNMVTIQIDGG+ Sbjct: 27 MTPIQALSLPTILDGKDVIGQGKTGSGKTAAFGLGVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLEKDRIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQTLLFSATFPKQMKSVADRIMRNPEMVKVESTHDHSSIQQHFYKVEGTEARDDALELLLLHHQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVATDVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMYRVAQIDEYMDMPIEPSQLPAKPIAKPYYSNMVTIQIDGGK 393 The following BLAST results are available for this feature:
BLAST of dead deah box helicase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of dead deah box helicase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of dead deah box helicase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold913_size81748:12689..21568- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold913_size81748-snap-gene-0.4 ID=maker-scaffold913_size81748-snap-gene-0.4|Name=dead deah box helicase|organism=Tigriopus kingsejongensis|type=gene|length=8880bp|location=Sequence derived from alignment at scaffold913_size81748:12689..21568- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'dead deah box helicase' has the following synonyms
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