pipsqueak, maker-scaffold918_size81203-snap-gene-0.25 (gene) Tigriopus kingsejongensis

Overview


Name	pipsqueak
Unique Name	maker-scaffold918_size81203-snap-gene-0.25
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of pipsqueak vs. L. salmonis genes
Match: EMLSAG00000011119 (supercontig:LSalAtl2s:LSalAtl2s753:172698:206363:1 gene:EMLSAG00000011119 transcript:EMLSAT00000011119 description:"augustus_masked-LSalAtl2s753-processed-gene-1.0")

HSP 1 Score: 88.5817 bits (218), Expect = 1.666e-20
Identity = 43/101 (42.57%), Postives = 67/101 (66.34%), Query Frame = 0

Query:   34 EENFVDVSLVCLNRCNEGDSESSCIKAHKMILASSSQFFQTILKQNPCQHPVVILPEGISMEILESILEFVYKGEVSIPDSRLQSVLQAASYLQIQGLSGQ 134
            EE+FVDV+L C          S    AHK++L++ S +F+ +LK NPC HP++IL + + ++I ES+L+F+Y GEV I + R++  L+ A  LQI+GL+ Q
Sbjct:   64 EEDFVDVTLAC---------NSQQFNAHKVVLSACSPYFRKLLKSNPCHHPIIILRDVVEIDI-ESLLKFMYNGEVQISEDRIKDFLKTAESLQIRGLAEQ 154

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BLAST of pipsqueak vs. L. salmonis genes
Match: EMLSAG00000007352 (supercontig:LSalAtl2s:LSalAtl2s416:6420:9389:1 gene:EMLSAG00000007352 transcript:EMLSAT00000007352 description:"augustus_masked-LSalAtl2s416-processed-gene-0.4")

HSP 1 Score: 85.8853 bits (211), Expect = 1.242e-18
Identity = 62/169 (36.69%), Postives = 87/169 (51.48%), Query Frame = 0

Query:   31 QLR-EENFVDVSLVCLNRCNEGDSESSCIKAHKMILASSSQFFQTILKQNPCQHPVVILPEGISMEILESILEFVYKGEVSIPDSRLQSVLQAASYLQIQGLSGQPPTHPDEDGIPEGADPSKVWEQSAEGSTSPSERPESQTSS---HSLKRKSSPKYHFKNKRKPQN 195
            QLR +E+F DV+L C          S  IKAHK+IL++ S FF++++K  P QHP++ L  GI    LES+L F+Y GEV I    L   L  A  L++ GL         +D  P+ ++    +E        P +R  S T     H +KR+SSP  H +NKR   N
Sbjct:   24 QLRNDEDFFDVTLAC---------GSKHIKAHKVILSACSSFFRSLIKSIPHQHPLLYL-RGIDFNHLESVLCFMYNGEVRIKPHELDQFLSIAQELKVNGLM--------QDQSPQSSNGVNKFE------PMPLKRSLSTTEDKPVHEVKRESSPPLHLQNKRIALN 168

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BLAST of pipsqueak vs. L. salmonis genes
Match: EMLSAG00000011532 (supercontig:LSalAtl2s:LSalAtl2s799:336948:340588:1 gene:EMLSAG00000011532 transcript:EMLSAT00000011532 description:"augustus_masked-LSalAtl2s799-processed-gene-3.12")

HSP 1 Score: 85.5001 bits (210), Expect = 3.170e-18
Identity = 47/112 (41.96%), Postives = 73/112 (65.18%), Query Frame = 0

Query:   27 CLDQQLREENFVDVSLVCLNRCNEGDSESSCIKAHKMILASSSQFFQTILKQNPCQHPVVILPEGISMEILESILEFVYKGEVSIPDSRLQSVLQAASYLQIQGL--SGQPP 136
            CLD    +E F DVS+     C EG+S    I+AHK++LAS S +F  I K+NPC HPV+IL E + ++I ++++ ++Y G VS+ + R+   L+AA +L+I+G+  S  PP
Sbjct:   26 CLDD--LKEXFSDVSI----SCEEGES----IQAHKLVLASCSPYFLKIFKENPCPHPVLILNE-VPLDIFQALMIYMYHGAVSLSEKRVPLFLKAAKHLKIKGIGSSADPP 126

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BLAST of pipsqueak vs. L. salmonis genes
Match: EMLSAG00000008480 (supercontig:LSalAtl2s:LSalAtl2s51:913154:914229:-1 gene:EMLSAG00000008480 transcript:EMLSAT00000008480 description:"maker-LSalAtl2s51-augustus-gene-9.13")

HSP 1 Score: 84.3445 bits (207), Expect = 4.819e-18
Identity = 58/162 (35.80%), Postives = 84/162 (51.85%), Query Frame = 0

Query:   31 QLR-EENFVDVSLVCLNRCNEGDSESSCIKAHKMILASSSQFFQTILKQNPCQHPVVILPEGISMEILESILEFVYKGEVSIPDSRLQSVLQAASYLQIQGLSGQPPTHPDEDGIPEGADPSKVWEQSAEGSTSPSERPESQTSSHSLKRKSSPKYHFKNKR 191
            QLR +E+F DV+L C          S  IKAHK+IL++ S FF++++K  P QHP++ L  GI    LES+L F+Y GEV I    L   L  A  L++ GL         +D   + ++     E      + P+    + T  H +KR+SSP  H +NKR
Sbjct:   24 QLRNDEDFFDVTLAC---------GSKHIKAHKVILSACSSFFRSLIKSIPHQHPLLYL-RGIDFNHLESVLCFMYNGEVRIKPHELDQFLSVAQELKVNGLV--------QDRSSQSSNEVNKLEPMPLKRSLPT---TNDTPVHEVKRESSPPLHLRNKR 164

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BLAST of pipsqueak vs. L. salmonis genes
Match: EMLSAG00000001548 (supercontig:LSalAtl2s:LSalAtl2s126:209647:210033:1 gene:EMLSAG00000001548 transcript:EMLSAT00000001548 description:"augustus_masked-LSalAtl2s126-processed-gene-2.5")

HSP 1 Score: 78.5666 bits (192), Expect = 9.593e-18
Identity = 41/113 (36.28%), Postives = 71/113 (62.83%), Query Frame = 0

Query:   30 QQLREE-NFVDVSLVCLNRCNEGDSESSCIKAHKMILASSSQFFQTILKQNPCQHPVVILPEGISMEILESILEFVYKGEVSIPDSRLQSVLQAASYLQIQGLSGQPPTHPDE 141
            + LR+E +F DV+L C         +    KAHKM+L++ S +F+ +L++NP +HP++IL + +  + L +ILEF+Y GEV++   +L + L+ A  L+++GL+  P T   E
Sbjct:   26 KHLRDEKSFTDVTLAC---------DGQTCKAHKMVLSACSPYFKALLEENPAKHPIIILKD-VPFQHLTAILEFMYAGEVNVAQDQLPAFLKTAERLKVKGLAEAPQTIKQE 128

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BLAST of pipsqueak vs. L. salmonis genes
Match: EMLSAG00000003038 (supercontig:LSalAtl2s:LSalAtl2s1728:22097:26590:1 gene:EMLSAG00000003038 transcript:EMLSAT00000003038 description:"maker-LSalAtl2s1728-augustus-gene-0.10")

HSP 1 Score: 85.1149 bits (209), Expect = 9.715e-18
Identity = 39/106 (36.79%), Postives = 68/106 (64.15%), Query Frame = 0

Query:   28 LDQQLREENFVDVSLVCLNRCNEGDSESSCIKAHKMILASSSQFFQTILKQNPCQHPVVILPEGISMEILESILEFVYKGEVSIPDSRLQSVLQAASYLQIQGLSG 133
             D  L+ E  VD +LVC         E + ++AHK++L++ S +FQ I   N C+HP+++L +    E  + I++F+YKGE S+P+S+L S+++AA  L+++GL+ 
Sbjct:   21 FDTLLQNEALVDCTLVC---------EDTSVRAHKVVLSACSPYFQKIFTDNVCKHPIIVLKDIKGWEA-QCIVDFMYKGETSVPESQLTSLIKAAESLKVRGLTS 116

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BLAST of pipsqueak vs. L. salmonis genes
Match: EMLSAG00000006827 (supercontig:LSalAtl2s:LSalAtl2s385:122699:145346:1 gene:EMLSAG00000006827 transcript:EMLSAT00000006827 description:"maker-LSalAtl2s385-augustus-gene-1.13")

HSP 1 Score: 81.6481 bits (200), Expect = 1.546e-16
Identity = 40/101 (39.60%), Postives = 63/101 (62.38%), Query Frame = 0

Query:   34 EENFVDVSLVCLNRCNEGDSESSCIKAHKMILASSSQFFQTILKQNPCQHPVVILPEGISMEILESILEFVYKGEVSIPDSRLQSVLQAASYLQIQGLSGQ 134
            +E+FVDV+L C         E   IKAHK+IL++ S +F+ + ++ PC HP++IL +      LES++++VY+G+  I    L S L+ A  LQI+GL+ Q
Sbjct:   27 DEDFVDVTLSC---------EGRTIKAHKVILSACSLYFRDVFRETPCNHPIIIL-KDTQYSDLESLVKYVYQGQXYISQENLSSFLKTADALQIKGLAEQ 117

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BLAST of pipsqueak vs. L. salmonis genes
Match: EMLSAG00000001228 (supercontig:LSalAtl2s:LSalAtl2s11:428586:431606:1 gene:EMLSAG00000001228 transcript:EMLSAT00000001228 description:"maker-LSalAtl2s11-augustus-gene-4.13")

HSP 1 Score: 79.337 bits (194), Expect = 2.036e-16
Identity = 55/167 (32.93%), Postives = 83/167 (49.70%), Query Frame = 0

Query:   31 QLRE-ENFVDVSLVCLNRCNEGDSESSCIKAHKMILASSSQFFQTILKQNPCQHPVVILPEGISMEILESILEFVYKGEVSIPDSRLQSVLQAASYLQIQGLSGQPPTHPDEDGIPEGADPSKVWEQSAEGSTSPSERPESQTSSHSLKRKSSPKYHFKNKRKPQNP 196
            QLR+ E+F DV+L C +R          IKAHK+IL++ S FF++++K  P +HP++ L  G+    LES+L F+Y GEV +    L   L  A  L++ GL                    K  EQ+++   SPS  P    S   LK   + K H   K++ ++P
Sbjct:   24 QLRDDEDFFDVTLACGSRQ---------IKAHKVILSTCSSFFRSLIKSVPHEHPLLYL-RGVDFNHLESVLSFMYNGEVRVEQKELNDFLSVAQELRVNGLVQ-----------------DKNLEQTSDAGESPSGSP----SQKDLKHSQTLKNHEMEKKRKKSP 159

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BLAST of pipsqueak vs. L. salmonis genes
Match: EMLSAG00000010910 (supercontig:LSalAtl2s:LSalAtl2s729:47426:53045:-1 gene:EMLSAG00000010910 transcript:EMLSAT00000010910 description:"maker-LSalAtl2s729-augustus-gene-0.17")

HSP 1 Score: 81.2629 bits (199), Expect = 2.764e-16
Identity = 41/98 (41.84%), Postives = 64/98 (65.31%), Query Frame = 0

Query:   34 EENFVDVSLVCLNRCNEGDSESSCIKAHKMILASSSQFFQTILKQNPCQHPVVILPEGISMEILESILEFVYKGEVSIPDSRLQSVLQAASYLQIQGL 131
            +++FV ++L C         E   I +HKM+L++ S +F+ +LK NPC HPV+IL +  S E L +I+ FVY GEVS+  SR++S ++ A  L+I+GL
Sbjct:   26 DKDFVXLTLSC---------EGRKISSHKMLLSACSPYFRGLLKDNPCPHPVIILRQ-TSYEDLVAIIHFVYNGEVSLHQSRVKSFIKTAKSLKIRGL 113

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BLAST of pipsqueak vs. L. salmonis genes
Match: EMLSAG00000005406 (supercontig:LSalAtl2s:LSalAtl2s290:493651:518008:1 gene:EMLSAG00000005406 transcript:EMLSAT00000005406 description:"maker-LSalAtl2s290-augustus-gene-5.21")

HSP 1 Score: 78.9518 bits (193), Expect = 4.301e-16
Identity = 50/132 (37.88%), Postives = 79/132 (59.85%), Query Frame = 0

Query:   15 YHLKNSNFI--LGGCLDQQLREENFVDVSLVCLNRCNEGDSESSCIKAHKMILASSSQFFQTILK-QNPCQHPVVILPEGISMEILESILEFVYKGEVSIPDSRLQSVLQAASYLQIQGLSGQ--PPTHPDE 141
            Y LK +N+   +       L  E+FVDVSLV         S+   +KAH+++LA+ S +F+ ILK  +  QHPV++L + +    L+ I+EF+Y GEVS+    L S+L++A  L+++GL+ +  PP  PDE
Sbjct:   17 YCLKWNNYAASVTSTFKNILDGEDFVDVSLVA--------SKGHALKAHRVVLAACSVYFREILKGLSLWQHPVIVLKD-VPFTDLQGIVEFIYHGEVSVDQDALPSLLKSAEILKVKGLTEEDPPPFRPDE 139

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BLAST of pipsqueak vs. SwissProt
Match: gi|73621294|sp|P14083.2|LOV_DROME (RecName: Full=Protein jim lovell; AltName: Full=Protein TKR; AltName: Full=Tyrosine kinase-related; Short=dTKR)

HSP 1 Score: 95.9005 bits (237), Expect = 2.338e-19
Identity = 47/119 (39.50%), Postives = 78/119 (65.55%), Query Frame = 0

Query:   13 SLYHLKNSNFILGGCLDQQLREENFVDVSLVCLNRCNEGDSESSCIKAHKMILASSSQFFQTILKQNPCQHPVVILPEGISMEILESILEFVYKGEVSIPDSRLQSVLQAASYLQIQGL 131
            SL    + N IL    D  L+ +  VDV+LVC        +E+S I+AHKM+L++ S FFQ +  + PC+HPV++L +     ++++I++F+Y+GE+S+P  RLQ+++QA   LQ++GL
Sbjct:  116 SLRWNNHQNHILR-AFDALLKTKTLVDVTLVC--------AETS-IRAHKMVLSACSPFFQRVFAETPCKHPVIVL-KDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGL 223

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BLAST of pipsqueak vs. SwissProt
Match: gi|29428068|sp|Q9W0K7.2|BAB1_DROME (RecName: Full=Protein bric-a-brac 1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.948e-18
Identity = 44/120 (36.67%), Postives = 77/120 (64.17%), Query Frame = 0

Query:   15 YHLKNSNFI--LGGCLDQQLREENFVDVSLVCLNRCNEGDSESSCIKAHKMILASSSQFFQTILKQNPCQHPVVILPEGISMEILESILEFVYKGEVSIPDSRLQSVLQAASYLQIQGLS 132
            + L+ +N+   L    DQ L+ E FVDV+L C  R          +KAHKM+L++ S +FQT+L + PCQHP+VI+   ++   L++I+EF+Y+GE+++   ++  +L+ A  L+++GL+
Sbjct:  102 FCLRWNNYQTNLTTIFDQLLQNECFVDVTLACDGRS---------MKAHKMVLSACSPYFQTLLAETPCQHPIVIM-RDVNWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLA 211

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BLAST of pipsqueak vs. SwissProt
Match: gi|29428067|sp|Q9W0K4.2|BAB2_DROME (RecName: Full=Protein bric-a-brac 2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.244e-18
Identity = 42/109 (38.53%), Postives = 70/109 (64.22%), Query Frame = 0

Query:   24 LGGCLDQQLREENFVDVSLVCLNRCNEGDSESSCIKAHKMILASSSQFFQTILKQNPCQHPVVILPEGISMEILESILEFVYKGEVSIPDSRLQSVLQAASYLQIQGLS 132
            L    D+ L+ E+FVDV+L C         E   IKAHKM+L++ S +FQ +   NPCQHP++I+   +S   L++++EF+YKGE+++   ++  +L+ A  L+I+GL+
Sbjct:  209 LTNVFDELLQSESFVDVTLSC---------EGHSIKAHKMVLSACSPYFQALFYDNPCQHPIIIM-RDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLA 307

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BLAST of pipsqueak vs. SwissProt
Match: gi|73621174|sp|Q7KRI2.1|LOLAL_DROME (RecName: Full=Longitudinals lacking protein-like; Short=Lola-like protein; AltName: Full=Protein Batman)

HSP 1 Score: 79.7221 bits (195), Expect = 1.060e-16
Identity = 41/107 (38.32%), Postives = 70/107 (65.42%), Query Frame = 0

Query:   30 QQLREE-NFVDVSLVCLNRCNEGDSESSCIKAHKMILASSSQFFQTILKQNPCQHPVVILPEGISMEILESILEFVYKGEVSIPDSRLQSVLQAASYLQIQGLSGQP 135
            + LR+E +F DV+L C         E    KAHKM+L++ S +F+ +L++NP +HP++IL + +S   L++ILEF+Y GEV++   +L + L+ A  L+++GL+  P
Sbjct:   24 RHLRDEKSFTDVTLAC---------EGQTCKAHKMVLSACSPYFKALLEENPSKHPIIILKD-VSYIHLQAILEFMYAGEVNVSQEQLPAFLKTADRLKVKGLAETP 120

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BLAST of pipsqueak vs. SwissProt
Match: gi|13124701|sp|Q01295.2|BRC1_DROME (RecName: Full=Broad-complex core protein isoforms 1/2/3/4/5)

HSP 1 Score: 85.8853 bits (211), Expect = 2.901e-16
Identity = 41/101 (40.59%), Postives = 67/101 (66.34%), Query Frame = 0

Query:   34 EENFVDVSLVCLNRCNEGDSESSCIKAHKMILASSSQFFQTILKQNPCQHPVVILPEGISMEILESILEFVYKGEVSIPDSRLQSVLQAASYLQIQGLSGQ 134
            +E FVDV+L C     EG S    IKAH+++L++ S +F+ +LK  PC+HPV++L + ++   L +++EF+Y GEV++    LQS L+ A  L++ GL+ Q
Sbjct:   28 DEAFVDVTLAC-----EGRS----IKAHRVVLSACSPYFRELLKSTPCKHPVILL-QDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLTQQ 118

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BLAST of pipsqueak vs. SwissProt
Match: gi|13123979|sp|Q24206.2|BRC4_DROME (RecName: Full=Broad-complex core protein isoform 6)

HSP 1 Score: 85.5001 bits (210), Expect = 4.556e-16
Identity = 41/101 (40.59%), Postives = 67/101 (66.34%), Query Frame = 0

Query:   34 EENFVDVSLVCLNRCNEGDSESSCIKAHKMILASSSQFFQTILKQNPCQHPVVILPEGISMEILESILEFVYKGEVSIPDSRLQSVLQAASYLQIQGLSGQ 134
            +E FVDV+L C     EG S    IKAH+++L++ S +F+ +LK  PC+HPV++L + ++   L +++EF+Y GEV++    LQS L+ A  L++ GL+ Q
Sbjct:   28 DEAFVDVTLAC-----EGRS----IKAHRVVLSACSPYFRELLKSTPCKHPVILL-QDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLTQQ 118

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BLAST of pipsqueak vs. SwissProt
Match: gi|27923726|sp|Q24174.2|ABRU_DROME (RecName: Full=Protein abrupt; AltName: Full=Protein clueless)

HSP 1 Score: 85.5001 bits (210), Expect = 4.630e-16
Identity = 40/99 (40.40%), Postives = 64/99 (64.65%), Query Frame = 0

Query:   34 EENFVDVSLVCLNRCNEGDSESSCIKAHKMILASSSQFFQTILKQNPCQHPVVILPEGISMEILESILEFVYKGEVSIPDSRLQSVLQAASYLQIQGLS 132
            EE+FVDV+L C  R            AHK++L++ S +F+ +LK NPC+HP+VIL + +  + +E++L F+Y GEV++   +L   L+ A  LQI+GL+
Sbjct:   99 EEDFVDVTLACDERS---------FTAHKVVLSACSPYFRRLLKANPCEHPIVILRD-VRCDDVENLLSFMYNGEVNVSHEQLPDFLKTAHLLQIRGLA 187

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BLAST of pipsqueak vs. SwissProt
Match: gi|83287912|sp|Q08605.2|GAGA_DROME (RecName: Full=Transcription factor GAGA; AltName: Full=Adh transcription factor 2; AltName: Full=GAGA factor; Short=GAF; AltName: Full=Neural conserved at 70F; AltName: Full=Trithorax-like protein)

HSP 1 Score: 84.7297 bits (208), Expect = 4.769e-16
Identity = 48/108 (44.44%), Postives = 68/108 (62.96%), Query Frame = 0

Query:   40 VSLVCLNRCNEGD-------SESSCIKAHKMILASSSQFFQTILKQNPCQHPVVILPEGISMEILESILEFVYKGEVSIPDSRLQSVLQAASYLQIQGLSGQPPTHPD 140
            VS + L RC+ GD       +      AHK++L ++S F   +LK  PC+HPVV+L  G++   LE++LEFVY+GEVS+  ++L S+LQAA  L IQGL+ Q  T  D
Sbjct:   21 VSAIQLLRCH-GDLVDCTLAAGGRSFPAHKIVLCAASPFLLDLLKNTPCKHPVVML-AGVNANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGLAPQTVTKDD 126

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BLAST of pipsqueak vs. SwissProt
Match: gi|20455517|sp|P17789.2|TTKB_DROME (RecName: Full=Protein tramtrack, beta isoform; AltName: Full=Repressor protein fushi tarazu; AltName: Full=Tramtrack p69)

HSP 1 Score: 80.4925 bits (197), Expect = 1.109e-14
Identity = 40/105 (38.10%), Postives = 64/105 (60.95%), Query Frame = 0

Query:   28 LDQQLREENFVDVSLVCLNRCNEGDSESSCIKAHKMILASSSQFFQTILKQNPCQHPVVILPEGISMEILESILEFVYKGEVSIPDSRLQSVLQAASYLQIQGLS 132
             DQ L  E F DV+L           E   +KAHKM+L++ S +F T+   +P +HP+VIL + +    ++S+L+F+Y+GEVS+   RL + L+ A  L+I+GL+
Sbjct:   23 FDQLLHAETFTDVTLAV---------EGQHLKAHKMVLSACSPYFNTLFVSHPEKHPIVILKD-VPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLT 117

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BLAST of pipsqueak vs. SwissProt
Match: gi|47117851|sp|P42282.3|TTKA_DROME (RecName: Full=Protein tramtrack, alpha isoform; AltName: Full=Repressor protein fushi tarazu; AltName: Full=Tramtrack p88)

HSP 1 Score: 80.8777 bits (198), Expect = 1.233e-14
Identity = 41/109 (37.61%), Postives = 65/109 (59.63%), Query Frame = 0

Query:   24 LGGCLDQQLREENFVDVSLVCLNRCNEGDSESSCIKAHKMILASSSQFFQTILKQNPCQHPVVILPEGISMEILESILEFVYKGEVSIPDSRLQSVLQAASYLQIQGLS 132
            L    DQ L  E F DV+L           E   +KAHKM+L++ S +F T+   +P +HP+VIL + +    ++S+L+F+Y+GEVS+   RL + L+ A  L+I+GL+
Sbjct:   19 LLSVFDQLLHAETFTDVTLAV---------EGQHLKAHKMVLSACSPYFNTLFVSHPEKHPIVILKD-VPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLT 117

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BLAST of pipsqueak vs. nr
Match: gi|1069819500|ref|XP_018332834.1| (PREDICTED: uncharacterized protein LOC108742238 isoform X3 [Agrilus planipennis] >gi|1069819503|ref|XP_018332835.1| PREDICTED: uncharacterized protein LOC108742238 isoform X3 [Agrilus planipennis])

HSP 1 Score: 278.87 bits (712), Expect = 7.569e-83
Identity = 133/203 (65.52%), Postives = 167/203 (82.27%), Query Frame = 0

Query:  306 KSYTKKDVYEALQALKTRQMSLSRASEVYGIPATTLWQRANRMGIATPKREATNKVWSNEDLDSALDALRKKEISANKASKLYGIPSSTLYKIARKEGIELAQPFNAVQTSWSQEDLSKALDAIRKGM-AVQKAASEFGIPSGTLYGRCKKVGIELSKAATVHWSETDMVKALESVQSGNMSINQAAIHHNLPYSSLYGRINR 507
            K++T++D+  AL AL+   MSL++AS  YGIP+TTLWQRA+R+GI TPK+E   K W+ E+L+SAL+ALR   ISANKASK YGIPSSTLYKIAR+EGI+LA PFNA  T+W+QEDL KAL++IR G  +VQKA++EFGIP+GTLYGRCK+ GIELS++    WSE  M +ALE+V+ G+MSINQAAIH+NLPYSSLYGR  R
Sbjct:  299 KTWTQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIKLAAPFNAAPTTWTQEDLEKALESIRTGQSSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKR 501

HSP 2 Score: 133.265 bits (334), Expect = 1.641e-29
Identity = 73/177 (41.24%), Postives = 111/177 (62.71%), Query Frame = 0

Query:  360 KVWSNEDLDSALDALRKKEISANKASKLYGIPSSTLYKIARKEGIELAQPFNAVQTSWSQEDLSKALDAIRKG-MAVQKAASEFGIPSGTLYGRCKKVGIELS---KAATVHWSETDMVKALESVQSGNMSINQAAIHHNLPYSSLYGRINR----LRKENPTQWSGFASDLSLEAF 528
            K W+ ED++ ALDALR   +S  KAS  YGIPS+TL++ A + GI+  +     + SW++E+L+ AL+A+R G ++  KA+  +GIPS TLY   ++ GI+L+    AA   W++ D+ KALES+++G  S+ +A+    +P  +LYGR  R    L + NPT WS  A   +LEA 
Sbjct:  299 KTWTQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTK-SWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIKLAAPFNAAPTTWTQEDLEKALESIRTGQSSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAV 474

[Close]

BLAST of pipsqueak vs. nr
Match: gi|1130250385|ref|XP_019766345.1| (PREDICTED: uncharacterized protein LOC109541812 isoform X2 [Dendroctonus ponderosae])

HSP 1 Score: 275.404 bits (703), Expect = 1.031e-82
Identity = 132/203 (65.02%), Postives = 164/203 (80.79%), Query Frame = 0

Query:  306 KSYTKKDVYEALQALKTRQMSLSRASEVYGIPATTLWQRANRMGIATPKREATNKVWSNEDLDSALDALRKKEISANKASKLYGIPSSTLYKIARKEGIELAQPFNAVQTSWSQEDLSKALDAIRKG-MAVQKAASEFGIPSGTLYGRCKKVGIELSKAATVHWSETDMVKALESVQSGNMSINQAAIHHNLPYSSLYGRINR 507
            K++T+ D+  AL ALK   MSL++AS  YGIP+TTLWQRA+R+GI TPK+E   K W+ E+L++AL+ALR   ISANKASK YGIPSSTLYKIAR+EGI LA PFNA  T+W+ EDL KAL++IR G  +VQKA++EFGIP+GTLYGRCK+ GIELS++    WSE  M +ALE+V+ G+MSINQAAIH+NLPYSSLYGR  R
Sbjct:  198 KTWTQDDMDMALDALKNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNNALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRTGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKR 400

HSP 2 Score: 132.109 bits (331), Expect = 1.235e-29
Identity = 72/176 (40.91%), Postives = 109/176 (61.93%), Query Frame = 0

Query:  360 KVWSNEDLDSALDALRKKEISANKASKLYGIPSSTLYKIARKEGIELAQPFNAVQTSWSQEDLSKALDAIRKG-MAVQKAASEFGIPSGTLYGRCKKVGIELS---KAATVHWSETDMVKALESVQSGNMSINQAAIHHNLPYSSLYGRINR----LRKENPTQWSGFASDLSLEA 527
            K W+ +D+D ALDAL+   +S  KAS  YGIPS+TL++ A + GI+  +     + SW++E+L+ AL+A+R G ++  KA+  +GIPS TLY   ++ GI L+    AA   W+  D+ KALES+++G  S+ +A+    +P  +LYGR  R    L + NPT WS  A   +LEA
Sbjct:  198 KTWTQDDMDMALDALKNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTK-SWTEENLNNALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRTGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEA 372

[Close]

BLAST of pipsqueak vs. nr
Match: gi|158292841|ref|XP_001230984.2| (AGAP005244-PB [Anopheles gambiae str. PEST] >gi|157017182|gb|EAU76837.2| AGAP005244-PB [Anopheles gambiae str. PEST])

HSP 1 Score: 283.878 bits (725), Expect = 1.078e-82
Identity = 136/217 (62.67%), Postives = 175/217 (80.65%), Query Frame = 0

Query:  298 QTPSPPDTKSYTKKDVYEALQALKTRQMSLSRASEVYGIPATTLWQRANRMGIATPKREATNKVWSNEDLDSALDALRKKEISANKASKLYGIPSSTLYKIARKEGIELAQPFNAVQTSWSQEDLSKALDAIRKG-MAVQKAASEFGIPSGTLYGRCKKVGIELSKAATVHWSETDMVKALESVQSGNMSINQAAIHHNLPYSSLYGRINRLRKENP 513
            +TP+ P  K++T +D+  AL+AL++  MSL++AS  YGIP+TTLWQRA+R+GI TPK+E  +K W+ + L+SAL+ALR   ISANKASK +GIPSSTLYKIAR+EGI LA PFNA  T+WS EDL +AL+AIR G  +VQKA++EFGIP+GTLYGRCK+ GIELS++    WSE  M++ALESV+ G+MSINQAAIH+NLPYSSLYGR  R + + P
Sbjct:  312 KTPTGP--KTWTAEDMESALEALRSHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPSKTWNEDSLNSALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWSAEDLDRALEAIRAGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMMEALESVKQGHMSINQAAIHYNLPYSSLYGRFKRGKYDTP 526

[Close]

BLAST of pipsqueak vs. nr
Match: gi|1130250382|ref|XP_019766344.1| (PREDICTED: uncharacterized protein LOC109541812 isoform X1 [Dendroctonus ponderosae])

HSP 1 Score: 275.018 bits (702), Expect = 1.294e-82
Identity = 132/203 (65.02%), Postives = 164/203 (80.79%), Query Frame = 0

Query:  306 KSYTKKDVYEALQALKTRQMSLSRASEVYGIPATTLWQRANRMGIATPKREATNKVWSNEDLDSALDALRKKEISANKASKLYGIPSSTLYKIARKEGIELAQPFNAVQTSWSQEDLSKALDAIRKG-MAVQKAASEFGIPSGTLYGRCKKVGIELSKAATVHWSETDMVKALESVQSGNMSINQAAIHHNLPYSSLYGRINR 507
            K++T+ D+  AL ALK   MSL++AS  YGIP+TTLWQRA+R+GI TPK+E   K W+ E+L++AL+ALR   ISANKASK YGIPSSTLYKIAR+EGI LA PFNA  T+W+ EDL KAL++IR G  +VQKA++EFGIP+GTLYGRCK+ GIELS++    WSE  M +ALE+V+ G+MSINQAAIH+NLPYSSLYGR  R
Sbjct:  198 KTWTQDDMDMALDALKNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNNALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRTGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKR 400

HSP 2 Score: 132.109 bits (331), Expect = 1.592e-29
Identity = 72/176 (40.91%), Postives = 109/176 (61.93%), Query Frame = 0

Query:  360 KVWSNEDLDSALDALRKKEISANKASKLYGIPSSTLYKIARKEGIELAQPFNAVQTSWSQEDLSKALDAIRKG-MAVQKAASEFGIPSGTLYGRCKKVGIELS---KAATVHWSETDMVKALESVQSGNMSINQAAIHHNLPYSSLYGRINR----LRKENPTQWSGFASDLSLEA 527
            K W+ +D+D ALDAL+   +S  KAS  YGIPS+TL++ A + GI+  +     + SW++E+L+ AL+A+R G ++  KA+  +GIPS TLY   ++ GI L+    AA   W+  D+ KALES+++G  S+ +A+    +P  +LYGR  R    L + NPT WS  A   +LEA
Sbjct:  198 KTWTQDDMDMALDALKNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTK-SWTEENLNNALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRTGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEA 372

[Close]

BLAST of pipsqueak vs. nr
Match: gi|1218237449|ref|XP_021699964.1| (sex determination protein fruitless isoform X4 [Aedes aegypti])

HSP 1 Score: 286.96 bits (733), Expect = 1.658e-82
Identity = 138/217 (63.59%), Postives = 175/217 (80.65%), Query Frame = 0

Query:  298 QTPSPPDTKSYTKKDVYEALQALKTRQMSLSRASEVYGIPATTLWQRANRMGIATPKREATNKVWSNEDLDSALDALRKKEISANKASKLYGIPSSTLYKIARKEGIELAQPFNAVQTSWSQEDLSKALDAIRKG-MAVQKAASEFGIPSGTLYGRCKKVGIELSKAATVHWSETDMVKALESVQSGNMSINQAAIHHNLPYSSLYGRINRLRKENP 513
            +TPS P  K++T +D+  AL+AL+T  MSL++AS  YGIP+TTLWQRA+R+GI TPK+E  +K W+ + L+SAL+ALR   ISANKASK +GIPSSTLYKIAR+EGI LA PFNA  T+WS EDL +AL+AIR G  +VQKA++EFGIP+GTLYGRCK+ GIELS++    WSE  M++ALESV+ G+MSINQAAIH+NLPYSSLYGR  R + + P
Sbjct:  537 KTPSGP--KTWTAEDMESALEALRTHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPSKTWNEDSLNSALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWSAEDLDRALEAIRAGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMMEALESVKQGHMSINQAAIHYNLPYSSLYGRFKRGKYDTP 751

HSP 2 Score: 98.5969 bits (244), Expect = 1.150e-17
Identity = 44/108 (40.74%), Postives = 69/108 (63.89%), Query Frame = 0

Query:   24 LGGCLDQQLREENFVDVSLVCLNRCNEGDSESSCIKAHKMILASSSQFFQTILKQNPCQHPVVILPEGISMEILESILEFVYKGEVSIPDSRLQSVLQAASYLQIQGL 131
            +     + L  ++FVDV+L C         E + +KAHK++L++ S +FQ IL  NPC+HP +ILP  I    L+ I+EFVY+GE+ + ++ LQS+L+ A  L+I+GL
Sbjct:   41 MTSVFHELLETQSFVDVTLAC---------EYNSLKAHKVVLSACSAYFQKILLDNPCKHPTIILPSDICFSDLQFIIEFVYRGEIDVSEAELQSLLRTAEQLKIKGL 139

The following BLAST results are available for this feature:

BLAST of pipsqueak vs. L. salmonis genes
BLAST of pipsqueak vs. SwissProt
BLAST of pipsqueak vs. nr

BLAST of pipsqueak vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25


Match Name	E-value	Identity	Description
EMLSAG00000011119	1.666e-20	42.57	supercontig:LSalAtl2s:LSalAtl2s753:172698:206363:1...	[more]
EMLSAG00000007352	1.242e-18	36.69	supercontig:LSalAtl2s:LSalAtl2s416:6420:9389:1 gen...	[more]
EMLSAG00000011532	3.170e-18	41.96	supercontig:LSalAtl2s:LSalAtl2s799:336948:340588:1...	[more]
EMLSAG00000008480	4.819e-18	35.80	supercontig:LSalAtl2s:LSalAtl2s51:913154:914229:-1...	[more]
EMLSAG00000001548	9.593e-18	36.28	supercontig:LSalAtl2s:LSalAtl2s126:209647:210033:1...	[more]
EMLSAG00000003038	9.715e-18	36.79	supercontig:LSalAtl2s:LSalAtl2s1728:22097:26590:1 ...	[more]
EMLSAG00000006827	1.546e-16	39.60	supercontig:LSalAtl2s:LSalAtl2s385:122699:145346:1...	[more]
EMLSAG00000001228	2.036e-16	32.93	supercontig:LSalAtl2s:LSalAtl2s11:428586:431606:1 ...	[more]
EMLSAG00000010910	2.764e-16	41.84	supercontig:LSalAtl2s:LSalAtl2s729:47426:53045:-1 ...	[more]
EMLSAG00000005406	4.301e-16	37.88	supercontig:LSalAtl2s:LSalAtl2s290:493651:518008:1...	[more]

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BLAST of pipsqueak vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 21


Match Name	E-value	Identity	Description
gi\|73621294\|sp\|P14083.2\|LOV_DROME	2.338e-19	39.50	RecName: Full=Protein jim lovell; AltName: Full=Pr...	[more]
gi\|29428068\|sp\|Q9W0K7.2\|BAB1_DROME	1.948e-18	36.67	RecName: Full=Protein bric-a-brac 1	[more]
gi\|29428067\|sp\|Q9W0K4.2\|BAB2_DROME	3.244e-18	38.53	RecName: Full=Protein bric-a-brac 2	[more]
gi\|73621174\|sp\|Q7KRI2.1\|LOLAL_DROME	1.060e-16	38.32	RecName: Full=Longitudinals lacking protein-like; ...	[more]
gi\|13124701\|sp\|Q01295.2\|BRC1_DROME	2.901e-16	40.59	RecName: Full=Broad-complex core protein isoforms ...	[more]
gi\|13123979\|sp\|Q24206.2\|BRC4_DROME	4.556e-16	40.59	RecName: Full=Broad-complex core protein isoform 6	[more]
gi\|27923726\|sp\|Q24174.2\|ABRU_DROME	4.630e-16	40.40	RecName: Full=Protein abrupt; AltName: Full=Protei...	[more]
gi\|83287912\|sp\|Q08605.2\|GAGA_DROME	4.769e-16	44.44	RecName: Full=Transcription factor GAGA; AltName: ...	[more]
gi\|20455517\|sp\|P17789.2\|TTKB_DROME	1.109e-14	38.10	RecName: Full=Protein tramtrack, beta isoform; Alt...	[more]
gi\|47117851\|sp\|P42282.3\|TTKA_DROME	1.233e-14	37.61	RecName: Full=Protein tramtrack, alpha isoform; Al...	[more]

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BLAST of pipsqueak vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1069819500\|ref\|XP_018332834.1\|	7.569e-83	65.52	PREDICTED: uncharacterized protein LOC108742238 is...	[more]
gi\|1130250385\|ref\|XP_019766345.1\|	1.031e-82	65.02	PREDICTED: uncharacterized protein LOC109541812 is...	[more]
gi\|158292841\|ref\|XP_001230984.2\|	1.078e-82	62.67	AGAP005244-PB [Anopheles gambiae str. PEST] >gi\|15...	[more]
gi\|1130250382\|ref\|XP_019766344.1\|	1.294e-82	65.02	PREDICTED: uncharacterized protein LOC109541812 is...	[more]
gi\|1218237449\|ref\|XP_021699964.1\|	1.658e-82	63.59	sex determination protein fruitless isoform X4 [Ae...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold918_size81203	supercontig	scaffold918_size81203:75794..78132 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold918_size81203-snap-gene-0.25-mRNA-1	maker-scaffold918_size81203-snap-gene-0.25-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold918_size81203:75794..78132-

gene from alignment at scaffold918_size81203:75794..78132-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold918_size81203-snap-gene-0.25 ID=maker-scaffold918_size81203-snap-gene-0.25|Name=pipsqueak|organism=Tigriopus kingsejongensis|type=gene|length=2339bp|location=Sequence derived from alignment at scaffold918_size81203:75794..78132- (Tigriopus kingsejongensis)
CTAATTCTCAAAATCTTTGTCCCCATCCAGCTCCGCTCTCATGACCTAGG
TCTTGCAGCAACAGGTCCCCGAAGTGGCAAAGCGATGGGGGATTCGCCCA
GCTCTCACGGGTCGACTCCCAGCCTCTACCATCTCAAGAATTCCAACTTC
ATCCTGGGTGGGGTGAGTTGACTTGGCATCTCTTTTTCTCCATCCACGAA
TTGGGGCTCACATGTTCCATTTTCAGTGCCTGGATCAACAACTGAGGGAG
GAGAACTTCGTAGACGTCTCCTTGGTGTGCCTGAATCGATGCAACGAGGG
GGACTCCGAGAGCTCTTGCATCAAAGCCCACAAGGTAGGGTTACGTGGGG
GCAGACTAAGCGGAAGGGTGTCTCCGTAATTGGTGGGGATTTGAGATACA
TTTGTTATTATTGACCTCGTTAGTGCTGGCACATGGTGCTCACTTCCGGC
TCAATACTCAAACACCTCGGGTTATATTTGCAGATGATCCTGGCATCCTC
GTCACAGTTTTTCCAAACCATCCTTAAGCAGAATCCTTGCCAACACCCTG
TGGTAATCCTGCCCGAGGGGATCTCCATGGAGATTCTCGAATCCATCCTG
GAGTTTGTGTACAAAGGTGAAGTGTCTATTCCGGATTCCAGGCTCCAATC
CGTCCTGCAAGCCGCTAGCTACCTCCAAATCCAAGGCCTCAGCGGCCAAC
CGCCCACCCATCCGGATGAGGACGGAATCCCCGAGGGTGCTGATCCGTCC
AAAGTCTGGGAACAGAGTGCAGAAGGGTCAACGAGCCCCAGCGAGAGACC
CGAAAGCCAGACAAGTTCTCACTCCCTCAAGAGGAAATCCTCCCCCAAGT
ACCACTTCAAAAACAAGAGGAAGCCTCAAAACCCCAAGAAGTTTGGCGAT
GAAGCCACTGGACTGAGTCTGGAATTAGCCGAGAGCAATCACTTCGAGTA
TGAGATGAAGCTGGAAGTCCCGGACATGGAAGACGAAGTGGTGGAGGAGG
AGAATAAGCCGATGGACTTCACCATGAAAGCCGGCAACGACATCAAGGTC
GAAGAAGAAGAAGAGGAGGAAGAGCCGCAGGGGCTGGATGTGACAGAGGT
CGTCTCTCCGTACTTCGGGATCGAGGCCTCGCATGCGTCGTCGTTGCGTC
CGACCTTGGTGGAGCAAGTGTCCGTCCACGACTACGATCAGACACCCAGC
CCACCGGACACCAAGTCCTACACGAAGAAGGACGTGTATGAGGCCTTGCA
GGCCCTCAAGACCAGGCAGATGTCACTCTCTCGGGCCTCCGAGGTGTATG
GGATCCCGGCTACCACGCTTTGGCAGCGAGCCAACCGAATGGGAATTGCC
ACCCCCAAGAGGGAGGCCACGAACAAGGTCTGGAGTAACGAAGACCTGGA
TAGCGCCTTGGACGCCTTGCGGAAGAAGGAGATATCCGCCAACAAGGCCT
CCAAGCTGTATGGCATCCCCTCGAGCACACTGTACAAGATAGCCCGAAAG
GAGGGAATCGAACTGGCTCAGCCTTTCAATGCCGTCCAGACCTCCTGGAG
CCAGGAGGATCTCTCCAAAGCCCTAGATGCCATTCGCAAGGGCATGGCCG
TCCAGAAGGCGGCGAGTGAGTTTGGGATTCCCAGTGGCACCTTGTACGGG
CGCTGCAAGAAGGTGGGGATCGAGTTGTCCAAGGCCGCCACTGTCCATTG
GTCAGAGACTGACATGGTGAAGGCCTTGGAGTCCGTTCAGAGTGGGAATA
TGTCCATCAATCAGGCTGCCATTCACCACAATCTGCCCTATTCCTCGCTC
TACGGGCGCATCAACCGTTTGCGGAAGGAAAACCCCACGCAGTGGTCGGG
ATTCGCATCCGACCTCAGCCTGGAGGCTTTCTTAGCCACGGGCGGCACCA
GCCCAGCCCCTGAGGCATCGCTTCTCGCCCTAACTCAATCCTCCGACCAC
TCAAGACAGTCTGACTACACCTCGGCTTTCACCCACTATCTCCCTGGATC
CATGCCAACCAGGTTCCGCTCGGAGGCAACAGCCGACAGCTCGTAAGCTG
ACCGACGCATGTGACCGCCACAAAGGGGCCTTCGTTGATTAATTGTATGC
CTTCGTCCTCCACCAAGGAACGGAGGTGACTGCGTTGTGCACTGGTAAAT
GTGACTATATTCACACAAATGGGTAAAATCAGGAAAATGCGACAAATCAA
TCAAAAAAAAAAACGTGTCTCGTTGGAATTCTAATGCAATCAGCTCGTCC
CAAAGTTAGATGGCTTCAGCTATTTAATCTATTCCCCATGCTCTCCTTGA
AGTACAATTTTCAATGTGCAATATACATATATATATATA

Synonyms

The feature 'pipsqueak' has the following synonyms


Synonym
Tk10452

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