GL25327, maker-scaffold94_size379870-snap-gene-2.35 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of GL25327 vs. L. salmonis genes
Match: EMLSAG00000000598 (supercontig:LSalAtl2s:LSalAtl2s109:420684:423322:-1 gene:EMLSAG00000000598 transcript:EMLSAT00000000598 description:"maker-LSalAtl2s109-snap-gene-4.40") HSP 1 Score: 123.635 bits (309), Expect = 4.033e-35 Identity = 74/200 (37.00%), Postives = 108/200 (54.00%), Query Frame = 0 Query: 20 RVLSSICVVLLLCWPQSIEGDQALCGQGRANKFQYLFGDALTDTSDCIGPMGEAYPHEAVRRLLPQVNARGRGGRTMFAEPLQTSQGVREIGRNLLRDYALANHKLAPRVESFER-------VIERVKRDVDSSAANVTETVGETVSNATCKSATPARLCKSSFNTTAPMYGVSLTSGNPVTIVQKFPELLQQVVYETCE 212 ++ C++ ++ + ++G A C K +Y++GDAL D +C+GP G +YP +RR L R GRT GR ++D ++ +L +E++ R + R KR+ + ++ E C ++TP RLCKS+FNTTAPMYGVSLTSG TIVQKFP+LLQQVVYETC+ Sbjct: 2 KISYQTCLISIIFCIELLKGSSANC---HGKKLKYIYGDALRDGENCMGPDGFSYPSTQIRRFL---RKNARTGRTF-----------SNFGR-FVQDPSITRDQL---LETYTRSKSGDFMTLSRTKRNANETSEXKKEV---------CGASTPPRLCKSTFNTTAPMYGVSLTSGEAXTIVQKFPDLLQQVVYETCD 171
BLAST of GL25327 vs. nr
Match: gi|1286070875|ref|XP_023036421.1| (uncharacterized protein LOC6639160 [Drosophila willistoni]) HSP 1 Score: 125.176 bits (313), Expect = 1.189e-31 Identity = 78/169 (46.15%), Postives = 91/169 (53.85%), Query Frame = 0 Query: 44 CGQGRANKFQYLFGDALTDTSDCIGPMGEAYPHEAVRRLLPQVNARGRGGRTMFAEPLQTSQGVREIGRNLLRDYALANHKLAPRVESFERVIERVKRDVDSSAANVTETVGETVSNATCKSATPARLCKSSFNTTAPMYGVSLTSGNPVTIVQKFPELLQQVVYETCE 212 C GR +YL GDALTD+ DC+GP YP AV R N R GR L + LLR Y N+ A +R +K +SS A+ CKS TPARLCK+ +NTTAPMYGVSLTSG PVTIVQKFP+LLQQVV+E CE Sbjct: 49 CAGGRG--LKYLSGDALTDSLDCLGPNNAPYPSAAVARTFSNWNGNSRRGRQ---SKLPNTLDPAITTSALLRAYDEVNNNEAASSIGSDRYGRSLK---NSSPAH------------QCKSDTPARLCKTRYNTTAPMYGVSLTSGQPVTIVQKFPDLLQQVVFEVCE 197
BLAST of GL25327 vs. nr
Match: gi|1036818801|ref|XP_016997878.1| (PREDICTED: uncharacterized protein LOC108057927 isoform X2 [Drosophila takahashii]) HSP 1 Score: 124.405 bits (311), Expect = 1.389e-31 Identity = 83/204 (40.69%), Postives = 104/204 (50.98%), Query Frame = 0 Query: 22 LSSICVV--LLLC-----WPQ--SIEGDQALCGQGRANKFQYLFGDALTDTSDCIGPMGEAYPHEAVRRLLPQVNARGRGGRTMFAEPLQTSQGVREIGRNLLRDYALANHKLAPRVESFERVIERVKRDVDSSAANVTETVGETVSNAT----CKSATPARLCKSSFNTTAPMYGVSLTSGNPVTIVQKFPELLQQVVYETCE 212 L+++CV+ L C WP S + + C GR +YL GDALTD+ DC+GP YP AV R N R GR L ++ LLR Y N++ A + G ++ N + CKS TPARLCK+ +NTTAPMYGVSLTSG PVTIVQKFP+LLQQVV+E CE Sbjct: 3 LTALCVISIALTCANAALWPSYSSDDAPASRCSGGRG--LKYLSGDALTDSLDCLGPNNAPYPSAAVARTFSNWNGNSRRGRQ---SKLPSTLDPAITTSALLRAYDEVNNE-----------------------AVGSSRYGRSLKNGSPAQQCKSETPARLCKTRYNTTAPMYGVSLTSGQPVTIVQKFPDLLQQVVFEVCE 178
BLAST of GL25327 vs. nr
Match: gi|946580595|gb|EDW73199.2| (uncharacterized protein Dwil_GK17422 [Drosophila willistoni]) HSP 1 Score: 125.176 bits (313), Expect = 1.440e-31 Identity = 78/169 (46.15%), Postives = 91/169 (53.85%), Query Frame = 0 Query: 44 CGQGRANKFQYLFGDALTDTSDCIGPMGEAYPHEAVRRLLPQVNARGRGGRTMFAEPLQTSQGVREIGRNLLRDYALANHKLAPRVESFERVIERVKRDVDSSAANVTETVGETVSNATCKSATPARLCKSSFNTTAPMYGVSLTSGNPVTIVQKFPELLQQVVYETCE 212 C GR +YL GDALTD+ DC+GP YP AV R N R GR L + LLR Y N+ A +R +K +SS A+ CKS TPARLCK+ +NTTAPMYGVSLTSG PVTIVQKFP+LLQQVV+E CE Sbjct: 53 CAGGRG--LKYLSGDALTDSLDCLGPNNAPYPSAAVARTFSNWNGNSRRGRQ---SKLPNTLDPAITTSALLRAYDEVNNNEAASSIGSDRYGRSLK---NSSPAH------------QCKSDTPARLCKTRYNTTAPMYGVSLTSGQPVTIVQKFPDLLQQVVFEVCE 201
BLAST of GL25327 vs. nr
Match: gi|1036046338|ref|XP_016925725.1| (PREDICTED: uncharacterized protein LOC108006698 [Drosophila suzukii]) HSP 1 Score: 127.102 bits (318), Expect = 1.582e-31 Identity = 85/202 (42.08%), Postives = 105/202 (51.98%), Query Frame = 0 Query: 22 LSSICVV--LLLC-----WPQ--SIEGDQALCGQGRANKFQYLFGDALTDTSDCIGPMGEAYPHEAVRRLLPQVNARGRGGRTMFAEPLQTSQGVREIGRNLLRDYALANHKLAPRVESFERVIERVKRDVDSSAANVTETVGETVSNAT--CKSATPARLCKSSFNTTAPMYGVSLTSGNPVTIVQKFPELLQQVVYETCE 212 L+++CV+ L C WP S + + C GR +YL GDALTD+ DC+GP YP AV R N R GR L ++ LLR Y N++ A + G ++ NAT CKS TPARLCK+ +NTTAPMYGVSLTSG PVTIVQKFP+LLQQVV+E CE Sbjct: 113 LTALCVISIALTCANAALWPSYSSDDAPPSRCSGGRG--LKYLSGDALTDSLDCLGPNNAPYPSAAVARTFSNWNGNSRRGRQ---SKLPSTLDPAITTSALLRAYDEVNNE-----------------------AVGSSRYGRSLKNATPQCKSETPARLCKTRYNTTAPMYGVSLTSGQPVTIVQKFPDLLQQVVFEVCE 286
BLAST of GL25327 vs. nr
Match: gi|170034080|ref|XP_001844903.1| (conserved hypothetical protein [Culex quinquefasciatus] >gi|167875311|gb|EDS38694.1| conserved hypothetical protein [Culex quinquefasciatus]) HSP 1 Score: 123.635 bits (309), Expect = 2.109e-31 Identity = 75/180 (41.67%), Postives = 95/180 (52.78%), Query Frame = 0 Query: 34 PQSIEGDQALCGQ-GRANKFQYLFGDALTDTSDCIGPMGEAYPHEAVRRLLPQVNARGRGGRTMFAEPLQTSQGVREIGRNLLRDYALANHKLAPRVESFERVIERVKRDVDSSAANVTETVGETVSNATCKSATPARLCKSSFNTTAPMYGVSLTSGNPVTIVQKFPELLQQVVYETCE 212 P S+E Q L + + +Y+ G+ALTD+ +C+GP YP AV R N G R + P + + + R LL+ Y N E E V R R VDS C+ TP+RLCK+ +NTTAPMYGVSLTSG PVTIVQKFP+LLQQVV+E CE Sbjct: 67 PSSVEQQQTLLEKCSSSGNLKYISGNALTDSPNCLGPNNAPYPSAAVSRTFSSWNPSGSSRRGRMSAP--PTLDPKLMQRTLLQAYGDVNEN-----EMIEDVRTRYSRSVDS--------------QQQCRD-TPSRLCKTRYNTTAPMYGVSLTSGQPVTIVQKFPDLLQQVVFEVCE 224 The following BLAST results are available for this feature:
BLAST of GL25327 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of GL25327 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of GL25327 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold94_size379870:360246..362012- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold94_size379870-snap-gene-2.35 ID=maker-scaffold94_size379870-snap-gene-2.35|Name=GL25327|organism=Tigriopus kingsejongensis|type=gene|length=1767bp|location=Sequence derived from alignment at scaffold94_size379870:360246..362012- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'GL25327' has the following synonyms
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