GL25327, maker-scaffold94_size379870-snap-gene-2.35 (gene) Tigriopus kingsejongensis

Overview
NameGL25327
Unique Namemaker-scaffold94_size379870-snap-gene-2.35
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of GL25327 vs. L. salmonis genes
Match: EMLSAG00000000598 (supercontig:LSalAtl2s:LSalAtl2s109:420684:423322:-1 gene:EMLSAG00000000598 transcript:EMLSAT00000000598 description:"maker-LSalAtl2s109-snap-gene-4.40")

HSP 1 Score: 123.635 bits (309), Expect = 4.033e-35
Identity = 74/200 (37.00%), Postives = 108/200 (54.00%), Query Frame = 0
Query:   20 RVLSSICVVLLLCWPQSIEGDQALCGQGRANKFQYLFGDALTDTSDCIGPMGEAYPHEAVRRLLPQVNARGRGGRTMFAEPLQTSQGVREIGRNLLRDYALANHKLAPRVESFER-------VIERVKRDVDSSAANVTETVGETVSNATCKSATPARLCKSSFNTTAPMYGVSLTSGNPVTIVQKFPELLQQVVYETCE 212
            ++    C++ ++   + ++G  A C      K +Y++GDAL D  +C+GP G +YP   +RR L       R GRT               GR  ++D ++   +L   +E++ R        + R KR+ + ++    E          C ++TP RLCKS+FNTTAPMYGVSLTSG   TIVQKFP+LLQQVVYETC+
Sbjct:    2 KISYQTCLISIIFCIELLKGSSANC---HGKKLKYIYGDALRDGENCMGPDGFSYPSTQIRRFL---RKNARTGRTF-----------SNFGR-FVQDPSITRDQL---LETYTRSKSGDFMTLSRTKRNANETSEXKKEV---------CGASTPPRLCKSTFNTTAPMYGVSLTSGEAXTIVQKFPDLLQQVVYETCD 171          
BLAST of GL25327 vs. nr
Match: gi|1286070875|ref|XP_023036421.1| (uncharacterized protein LOC6639160 [Drosophila willistoni])

HSP 1 Score: 125.176 bits (313), Expect = 1.189e-31
Identity = 78/169 (46.15%), Postives = 91/169 (53.85%), Query Frame = 0
Query:   44 CGQGRANKFQYLFGDALTDTSDCIGPMGEAYPHEAVRRLLPQVNARGRGGRTMFAEPLQTSQGVREIGRNLLRDYALANHKLAPRVESFERVIERVKRDVDSSAANVTETVGETVSNATCKSATPARLCKSSFNTTAPMYGVSLTSGNPVTIVQKFPELLQQVVYETCE 212
            C  GR    +YL GDALTD+ DC+GP    YP  AV R     N   R GR      L  +         LLR Y   N+  A      +R    +K   +SS A+             CKS TPARLCK+ +NTTAPMYGVSLTSG PVTIVQKFP+LLQQVV+E CE
Sbjct:   49 CAGGRG--LKYLSGDALTDSLDCLGPNNAPYPSAAVARTFSNWNGNSRRGRQ---SKLPNTLDPAITTSALLRAYDEVNNNEAASSIGSDRYGRSLK---NSSPAH------------QCKSDTPARLCKTRYNTTAPMYGVSLTSGQPVTIVQKFPDLLQQVVFEVCE 197          
BLAST of GL25327 vs. nr
Match: gi|1036818801|ref|XP_016997878.1| (PREDICTED: uncharacterized protein LOC108057927 isoform X2 [Drosophila takahashii])

HSP 1 Score: 124.405 bits (311), Expect = 1.389e-31
Identity = 83/204 (40.69%), Postives = 104/204 (50.98%), Query Frame = 0
Query:   22 LSSICVV--LLLC-----WPQ--SIEGDQALCGQGRANKFQYLFGDALTDTSDCIGPMGEAYPHEAVRRLLPQVNARGRGGRTMFAEPLQTSQGVREIGRNLLRDYALANHKLAPRVESFERVIERVKRDVDSSAANVTETVGETVSNAT----CKSATPARLCKSSFNTTAPMYGVSLTSGNPVTIVQKFPELLQQVVYETCE 212
            L+++CV+   L C     WP   S +   + C  GR    +YL GDALTD+ DC+GP    YP  AV R     N   R GR      L ++         LLR Y   N++                       A  +   G ++ N +    CKS TPARLCK+ +NTTAPMYGVSLTSG PVTIVQKFP+LLQQVV+E CE
Sbjct:    3 LTALCVISIALTCANAALWPSYSSDDAPASRCSGGRG--LKYLSGDALTDSLDCLGPNNAPYPSAAVARTFSNWNGNSRRGRQ---SKLPSTLDPAITTSALLRAYDEVNNE-----------------------AVGSSRYGRSLKNGSPAQQCKSETPARLCKTRYNTTAPMYGVSLTSGQPVTIVQKFPDLLQQVVFEVCE 178          
BLAST of GL25327 vs. nr
Match: gi|946580595|gb|EDW73199.2| (uncharacterized protein Dwil_GK17422 [Drosophila willistoni])

HSP 1 Score: 125.176 bits (313), Expect = 1.440e-31
Identity = 78/169 (46.15%), Postives = 91/169 (53.85%), Query Frame = 0
Query:   44 CGQGRANKFQYLFGDALTDTSDCIGPMGEAYPHEAVRRLLPQVNARGRGGRTMFAEPLQTSQGVREIGRNLLRDYALANHKLAPRVESFERVIERVKRDVDSSAANVTETVGETVSNATCKSATPARLCKSSFNTTAPMYGVSLTSGNPVTIVQKFPELLQQVVYETCE 212
            C  GR    +YL GDALTD+ DC+GP    YP  AV R     N   R GR      L  +         LLR Y   N+  A      +R    +K   +SS A+             CKS TPARLCK+ +NTTAPMYGVSLTSG PVTIVQKFP+LLQQVV+E CE
Sbjct:   53 CAGGRG--LKYLSGDALTDSLDCLGPNNAPYPSAAVARTFSNWNGNSRRGRQ---SKLPNTLDPAITTSALLRAYDEVNNNEAASSIGSDRYGRSLK---NSSPAH------------QCKSDTPARLCKTRYNTTAPMYGVSLTSGQPVTIVQKFPDLLQQVVFEVCE 201          
BLAST of GL25327 vs. nr
Match: gi|1036046338|ref|XP_016925725.1| (PREDICTED: uncharacterized protein LOC108006698 [Drosophila suzukii])

HSP 1 Score: 127.102 bits (318), Expect = 1.582e-31
Identity = 85/202 (42.08%), Postives = 105/202 (51.98%), Query Frame = 0
Query:   22 LSSICVV--LLLC-----WPQ--SIEGDQALCGQGRANKFQYLFGDALTDTSDCIGPMGEAYPHEAVRRLLPQVNARGRGGRTMFAEPLQTSQGVREIGRNLLRDYALANHKLAPRVESFERVIERVKRDVDSSAANVTETVGETVSNAT--CKSATPARLCKSSFNTTAPMYGVSLTSGNPVTIVQKFPELLQQVVYETCE 212
            L+++CV+   L C     WP   S +   + C  GR    +YL GDALTD+ DC+GP    YP  AV R     N   R GR      L ++         LLR Y   N++                       A  +   G ++ NAT  CKS TPARLCK+ +NTTAPMYGVSLTSG PVTIVQKFP+LLQQVV+E CE
Sbjct:  113 LTALCVISIALTCANAALWPSYSSDDAPPSRCSGGRG--LKYLSGDALTDSLDCLGPNNAPYPSAAVARTFSNWNGNSRRGRQ---SKLPSTLDPAITTSALLRAYDEVNNE-----------------------AVGSSRYGRSLKNATPQCKSETPARLCKTRYNTTAPMYGVSLTSGQPVTIVQKFPDLLQQVVFEVCE 286          
BLAST of GL25327 vs. nr
Match: gi|170034080|ref|XP_001844903.1| (conserved hypothetical protein [Culex quinquefasciatus] >gi|167875311|gb|EDS38694.1| conserved hypothetical protein [Culex quinquefasciatus])

HSP 1 Score: 123.635 bits (309), Expect = 2.109e-31
Identity = 75/180 (41.67%), Postives = 95/180 (52.78%), Query Frame = 0
Query:   34 PQSIEGDQALCGQ-GRANKFQYLFGDALTDTSDCIGPMGEAYPHEAVRRLLPQVNARGRGGRTMFAEPLQTSQGVREIGRNLLRDYALANHKLAPRVESFERVIERVKRDVDSSAANVTETVGETVSNATCKSATPARLCKSSFNTTAPMYGVSLTSGNPVTIVQKFPELLQQVVYETCE 212
            P S+E  Q L  +   +   +Y+ G+ALTD+ +C+GP    YP  AV R     N  G   R   + P   +   + + R LL+ Y   N       E  E V  R  R VDS                 C+  TP+RLCK+ +NTTAPMYGVSLTSG PVTIVQKFP+LLQQVV+E CE
Sbjct:   67 PSSVEQQQTLLEKCSSSGNLKYISGNALTDSPNCLGPNNAPYPSAAVSRTFSSWNPSGSSRRGRMSAP--PTLDPKLMQRTLLQAYGDVNEN-----EMIEDVRTRYSRSVDS--------------QQQCRD-TPSRLCKTRYNTTAPMYGVSLTSGQPVTIVQKFPDLLQQVVFEVCE 224          
The following BLAST results are available for this feature:
BLAST of GL25327 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000005984.033e-3537.00supercontig:LSalAtl2s:LSalAtl2s109:420684:423322:-... [more]
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BLAST of GL25327 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of GL25327 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1286070875|ref|XP_023036421.1|1.189e-3146.15uncharacterized protein LOC6639160 [Drosophila wil... [more]
gi|1036818801|ref|XP_016997878.1|1.389e-3140.69PREDICTED: uncharacterized protein LOC108057927 is... [more]
gi|946580595|gb|EDW73199.2|1.440e-3146.15uncharacterized protein Dwil_GK17422 [Drosophila w... [more]
gi|1036046338|ref|XP_016925725.1|1.582e-3142.08PREDICTED: uncharacterized protein LOC108006698 [D... [more]
gi|170034080|ref|XP_001844903.1|2.109e-3141.67conserved hypothetical protein [Culex quinquefasci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold94_size379870supercontigscaffold94_size379870:360246..362012 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold94_size379870-snap-gene-2.35-mRNA-1maker-scaffold94_size379870-snap-gene-2.35-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold94_size379870:360246..362012-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold94_size379870-snap-gene-2.35 ID=maker-scaffold94_size379870-snap-gene-2.35|Name=GL25327|organism=Tigriopus kingsejongensis|type=gene|length=1767bp|location=Sequence derived from alignment at scaffold94_size379870:360246..362012- (Tigriopus kingsejongensis)
GTGGAGCACTGGAGGCATGTCGGGATCTGGCGCTGGGTGGAAAAATTCAG TCCATTTAGTCGGTGGGTATGGTTGCAATCTTGTAGCAAGCACAGTGTTG ACCACTCAACTTGATTTAGAGAGAGAGTGAGGAATCCTCAATTGGTAGTG AACTTCACAGATCCTTAATTGGCTCGCAACAGGTGCTTTGCTCTTCACCC ACATCACTTCCCCATTCCCGAAAAGGCCATTGAACTCCTGACACTCCTCG GCAATCATTGATTGGACCTTCTCCCGAAGGCGGAGGAGTGAATTTCATGT GCCTGATTCACCAGCATGATTGGCTGACCTGGGAAACCCAAATGTGTGTC AGTCTCCGAGGAAAGAACTTGCCGCCTTTGTTTTTTCCGCTCACGACCTG AGATTTCCTGAGGTGCCCTCGGTATTCGTCATTCATGCCATTTACTCCCT CCCAAGATCAATAGTAGAGAAAAAAGTACCACTCGCAGAGCGCCTCTTCC GCTAATCGAGTTCAACACGTGTTAATGGACCAAATCTCCGATTCAACCAA GCGATTAATCACCATGTCGGCAATCAAAACGGTAAGATTTCATGGCGTTT GAAGTGTTCAACACACTTCACGCCAGCCCCAAGTTCGTTCTACTTTCCGC TCATTAAGCCAGTAAACTGTTCAAAAAACCAGCGCACAATCGACTTAAAC AAACGAGGCAAGAGAAATCCAGACTCCAGAAATCCGGCTCAGCTGCCGAG TTGAAGGGTTCAGTGGCGAATGCACTTTGGCGGTGCCTGAATGGGCACTC TTTGGCGACTCAGCCAGGATTGTTTGAGCTCTGATGACGTGATGATTCTC TTCCCCTTGCAGAGAGTCCTCTCATCCATATGTGTGGTCCTACTGCTGTG TTGGCCTCAGAGCATTGAAGGTGATCAAGCCTTGTGCGGTCAAGGTCGGG CCAATAAGTTCCAATATCTCTTCGGCGATGCCCTCACAGACACTTCTGAC TGCATTGGCCCCATGGGTGAAGCTTATCCTCAGTAAGACCTTCAGTCGAC CCAAGTCTCAGGGACCCAATCATCCTCCCCTTTGCCTTTTCAGTGAAGCC GTCCGAAGGCTCTTGCCTCAAGTGAACGCCAGAGGCCGTGGAGGTCGAAC CATGTTTGCCGAGCCGCTCCAGACCTCCCAGGGAGTCAGGGAGATAGGGA GGAATTTGCTCCGGGATTATGCCTTGGCCAACCACAAGCTGGCTCCCAGA GTGGAGTCCTTTGAGCGAGTCATTGAGCGTGTGAAGCGCGATGGTGAGTT TGGCCTCGGATTCATGTTTCTGGGAAAGGGAAACGGAATGTTTTTGAGTG CCCCTTTGGCTCTGTTGGTTTTGCCCGAGGAAAGCGAAAGTTTTCTGACA TGGAGCCCGTTGGTTTACGATCGGATTTCACTGATTGACATGATCTGGAA GACGCCTGAGGCCGGAATCCACCGTCGCTGATGGTCTTGAGACATGAGCA ATCCCCAATGACATTCTGATTACTCCGCCTCCTTAGTCGACTCATCCGCC GCTAATGTCACCGAAACCGTGGGAGAAACCGTCTCCAATGCCACCTGCAA ATCGGCCACACCCGCCAGGCTGTGCAAGTCCTCCTTCAATACCACAGCCC CAATGTACGGAGTGTCCCTGACCTCGGGCAATCCAGTGACCATCGTGCAA AAGTTCCCTGAACTCCTCCAACAAGTTGTCTACGAAACCTGCGAGTGAGT ACGATAGAGAATGCGTT
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Synonyms
The feature 'GL25327' has the following synonyms
Synonym
Tk09634
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