poly rna polymerase gld2-a, maker-scaffold959_size76551-snap-gene-0.21 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of poly rna polymerase gld2-a vs. L. salmonis genes
Match: EMLSAG00000008531 (supercontig:LSalAtl2s:LSalAtl2s526:109566:111701:-1 gene:EMLSAG00000008531 transcript:EMLSAT00000008531 description:"maker-LSalAtl2s526-augustus-gene-1.27") HSP 1 Score: 51.6026 bits (122), Expect = 7.437e-8 Identity = 43/130 (33.08%), Postives = 68/130 (52.31%), Query Frame = 0 Query: 128 LEDLVSKTFPGGFAQV--FGSTLNGFGSSSSDMDMCIFL--ITNGVEDQSQLH---RLEFIKQSLFRLRRVIKKDLGHRILPDIEMIP----AKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYSQ 246 LE +S F G F + FGS++N FGS SD+DM I + + SQL+ + F ++++ ++ I +L I+P I + A+VPILK H L ++ D+S + GV + LLY Y + Sbjct: 252 LELCLSGLF-GTFVSILPFGSSVNSFGSCDSDLDMVINFSSLEKNDDSASQLYFHVKGGFGQRNMSQMYIRILANLLQDIVPGIRNVQSISNARVPILKYHHQLLNLECDLSASSLSGVFMSELLYLYGE 380
BLAST of poly rna polymerase gld2-a vs. SwissProt
Match: gi|74868425|sp|Q9VD44.3|GLD2A_DROME (RecName: Full=Poly(A) RNA polymerase gld-2 homolog A; Short=DmGLD2) HSP 1 Score: 94.7449 bits (234), Expect = 5.994e-21 Identity = 58/174 (33.33%), Postives = 96/174 (55.17%), Query Frame = 0 Query: 74 KYLSLSTTIQMDLPPCAWEESSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGH-RILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYSQ 246 ++L + ++M PP +K LS + + FL ++Q ++ K+ LW ++ + K +P + GS+++ FGS SDMD+C+ TN D R+E +++ L V+K+ LG + D +I A+VPIL+ D V +DI+ N+ +G+RNTHLLY YSQ Sbjct: 910 RFLLRAKFVEMRRPPKVMGCKNKWDPLSLSVWKKFLESQQTRHVYKIKMRLWRAIYTVAMKNYPRYGLYLVGSSISYFGSKCSDMDICMLACTNPNIDS----RME----AVYHL-HVMKELLGRTNMFQDFNLIEARVPILRFTDRCHKVEVDINFNNSVGIRNTHLLYCYSQ 1074
BLAST of poly rna polymerase gld2-a vs. SwissProt
Match: gi|82192766|sp|Q503I9.1|GLD2_DANRE (RecName: Full=Poly(A) RNA polymerase GLD2; AltName: Full=PAP-associated domain-containing protein 4) HSP 1 Score: 84.3445 bits (207), Expect = 1.444e-17 Identity = 52/157 (33.12%), Postives = 84/157 (53.50%), Query Frame = 0 Query: 90 AWEESSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQS-QLHRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYS 245 A+ SS + +LS + F A Q + KK A+L+ + K FP + GS+LNGFGS SSD D+C+ + V + ++ L +++ L++L + K ++I AKVPI+K D +S V D++ N+ +G+RNT LL Y+ Sbjct: 152 AFSPSSVKDKLSQQILNLFFACEQQSDDLEKKESCRAALQTDIQKIFPCAKVFLGGSSLNGFGSRSSDADLCLVIEEGPVNHRKDAVYVLSLVRKLLYKLSYIEKP----------QLIRAKVPIVKFRDRISGVEFDLNFNNTVGIRNTFLLRTYA 298
BLAST of poly rna polymerase gld2-a vs. SwissProt
Match: gi|74957307|sp|O17087.2|GLD2_CAEEL (RecName: Full=Poly(A) RNA polymerase gld-2; AltName: Full=Defective in germ line development protein 2) HSP 1 Score: 77.7962 bits (190), Expect = 3.595e-15 Identity = 52/163 (31.90%), Postives = 86/163 (52.76%), Query Frame = 0 Query: 87 PPCAW--EESSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDG--LSDVSIDISCNHPIGVRNTHLLYHYS 245 PP + E S+ LS + + Q E ++K+ L L +S FP V GS+LNGFG++SSDMD+C+ +ITN DQ ++ L ++ + + ++I AKVPIL+++ D+++D++ N+ + +RNTHLL +YS Sbjct: 534 PPTSLLSEPLSRMDVLSEKIWDYHNKVSQTDEMLQRKLHLRDMLYTAISPVFPLSGLYVVGSSLNGFGNNSSDMDLCL-MITNKDLDQKN--------DAVVVLNLILSTLQYEKFVESQKLILAKVPILRINFAAPFDDITVDLNANNSVAIRNTHLLCYYS 687
BLAST of poly rna polymerase gld2-a vs. SwissProt
Match: gi|123906238|sp|Q0VFA3.1|GLD2_XENTR (RecName: Full=Poly(A) RNA polymerase GLD2; AltName: Full=PAP-associated domain-containing protein 4) HSP 1 Score: 70.4774 bits (171), Expect = 8.753e-13 Identity = 45/150 (30.00%), Postives = 75/150 (50.00%), Query Frame = 0 Query: 97 QSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQL-HRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYS 245 + +LS + F A +Q +KK A L+ + + FP + GS+LNGFG+ SSD D+C+ L + ++ H L + + + I++ + I AKVPI+K D +S D++ N+ +G+RNT LL Y+ Sbjct: 199 KDKLSKQILELFQALQQQVCDLKKKDICRAELQREIQQIFPQSRLYLVGSSLNGFGTRSSDADLCLVLKDEPMNQHTEARHILSLLHKHFYTRLSYIERP---------QFIKAKVPIVKFRDKVSGAEFDLNVNNVVGIRNTFLLRTYA 339
BLAST of poly rna polymerase gld2-a vs. SwissProt
Match: gi|74871733|sp|Q9VYS4.1|GLD2B_DROME (RecName: Full=Poly(A) RNA polymerase gld-2 homolog B; AltName: Full=Protein wispy) HSP 1 Score: 70.0922 bits (170), Expect = 1.370e-12 Identity = 52/180 (28.89%), Postives = 90/180 (50.00%), Query Frame = 0 Query: 74 KYLSLSTTIQMDLPPCAWEESSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSK-TFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHRILPDIE------MIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYSQ 246 +YL+ + I++ + P K LS ++ + F +Q F+ K+ LW L + + F + GST+ GFG+ SSD+DMC+ L GV + + R +I L + +L D E +I A+VPIL+ D + + +D++ N+ +G++NT+LL Y+Q Sbjct: 945 RYLAQARNIEVTVQPEKLICMCKYDNLSAEIWKRFRGAQQTHNKFKLKMRLWRYLYLWMHQPMFERYRICLVGSTITGFGTDSSDIDMCL-LPEQGVHPHQHQYHQHHHFHNEKRTEALIILTLFNAVLKDTEVFQDFNLIEARVPILRFKDISNGIEVDLNFNNCVGIKNTYLLQLYAQ 1123
BLAST of poly rna polymerase gld2-a vs. SwissProt
Match: gi|67462100|sp|Q5VYS8.1|TUT7_HUMAN (RecName: Full=Terminal uridylyltransferase 7; Short=TUTase 7; AltName: Full=Zinc finger CCHC domain-containing protein 6) HSP 1 Score: 69.707 bits (169), Expect = 1.905e-12 Identity = 46/120 (38.33%), Postives = 67/120 (55.83%), Query Frame = 0 Query: 127 SLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHR-ILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYS 245 +LE + + FPG +FGS+ NGFG SD+D+C + NG+E L + I++ L RV++K G R ILP + AKVPI+K S + +DIS + + + NT LL YS Sbjct: 1028 NLESFIRQDFPGTKLSLFGSSKNGFGFKQSDLDVC--MTINGLETAEGLDCVRTIEE----LARVLRKHSGLRNILP---ITTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYS 1138
BLAST of poly rna polymerase gld2-a vs. SwissProt
Match: gi|259016375|sp|Q5BLK4.3|TUT7_MOUSE (RecName: Full=Terminal uridylyltransferase 7; Short=TUTase 7; AltName: Full=Zinc finger CCHC domain-containing protein 6) HSP 1 Score: 68.5514 bits (166), Expect = 5.532e-12 Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = 0 Query: 127 SLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHR-ILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYS 245 +LE + + FPG +FGS+ NGFG SD+D+C + NG E L + I++ L RV++K G R ILP + AKVPI+K S + +DIS + + + NT LL YS Sbjct: 1024 NLESFIKQDFPGTKLSLFGSSKNGFGFKQSDLDVC--MTINGHETAEGLDCVRTIEE----LARVLRKHSGLRNILP---ITTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYS 1134
BLAST of poly rna polymerase gld2-a vs. SwissProt
Match: gi|82182837|sp|Q6DFA8.1|GLD2B_XENLA (RecName: Full=Poly(A) RNA polymerase GLD2-B; Short=xGLD-2; AltName: Full=PAP-associated domain-containing protein 4-B) HSP 1 Score: 67.781 bits (164), Expect = 7.645e-12 Identity = 45/150 (30.00%), Postives = 74/150 (49.33%), Query Frame = 0 Query: 97 QSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQL-HRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYS 245 + +LS + F A +Q +KK A L+ + + FP + GS+LNGFG SSD D+C+ L + ++ H L + + + I++ + I AKVPI+K D +S D++ N+ +G+RNT LL Y+ Sbjct: 180 KDKLSKQILDLFQALQQQVCDLKKKDICRAELQREIQQIFPQSRLYLVGSSLNGFGIRSSDADLCLVLKEEPMNQNTEARHILSLLHKHFYTRLSYIERP---------QFIRAKVPIVKFRDKVSGAEFDLNVNNVVGIRNTFLLRTYA 320
BLAST of poly rna polymerase gld2-a vs. SwissProt
Match: gi|82180930|sp|Q641A1.1|GLD2A_XENLA (RecName: Full=Poly(A) RNA polymerase GLD2-A; AltName: Full=PAP-associated domain-containing protein 4-A) HSP 1 Score: 67.3958 bits (163), Expect = 9.482e-12 Identity = 45/149 (30.20%), Postives = 74/149 (49.66%), Query Frame = 0 Query: 97 QSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYS 245 + +LS + F A +Q +KK A L+ + + FP + GS+LNGFG+ SD D+C+ L + ++ ++ + LF R + L + I AKVPI+K D +S D++ N+ +G+RNT LL Y+ Sbjct: 180 EDKLSQQILDLFQALQQQVCDIKKKDICRAELQREIQQIFPQSRLYLVGSSLNGFGTRISDADLCLVLKEEPMNQHTEATQILGLLHKLFYTRLSYIERL--------QFIRAKVPIVKFRDKVSGAEFDLNVNNVVGIRNTFLLRTYA 320
BLAST of poly rna polymerase gld2-a vs. SwissProt
Match: gi|81879697|sp|Q91YI6.1|GLD2_MOUSE (RecName: Full=Poly(A) RNA polymerase GLD2; Short=mGLD-2; AltName: Full=PAP-associated domain-containing protein 4) HSP 1 Score: 64.6994 bits (156), Expect = 7.105e-11 Identity = 49/158 (31.01%), Postives = 76/158 (48.10%), Query Frame = 0 Query: 97 QSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCI--------FLITNGVEDQSQLHRLEFI-KQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYS 245 + +LS + F +Q +KK A L+ + FP + GS+LNGFG+ SSD D+C+ F + E + H L + K RL I++ ++I AKVPI+K D +S V D++ N+ +G+RNT LL Y+ Sbjct: 153 KDKLSQQILELFETCQQQASDLKKKELCRAQLQREIQLLFPQSRLFLVGSSLNGFGARSSDGDLCLVVKEEPCFFQVNQKTEAR---HILTLVHKHFCTRLSGYIERP---------QLIRAKVPIVKFRDKVSCVEFDLNVNNTVGIRNTFLLRTYA 298
BLAST of poly rna polymerase gld2-a vs. nr
Match: gi|1000752314|ref|XP_015599029.1| (PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like isoform X3 [Cephus cinctus]) HSP 1 Score: 111.694 bits (278), Expect = 2.019e-24 Identity = 63/173 (36.42%), Postives = 99/173 (57.23%), Query Frame = 0 Query: 74 KYLSLSTTIQMDLPPCAWEESSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYSQ 246 ++L+ S IQ+ P S LS D+ F++N+Q +R K+ LW L + TFP + GST+NGFGS +SD+DMC+ L+ + DQ +++ L +++K + +E+I AKVPILK HD + ++ +D++CN+ +G+RNTHLLY YSQ Sbjct: 275 RFLARSHLIQVTHVPKDLLNGSHWDDLSRDVWEKFMSNQQTETTYRNKMMLWKYLYIYIKSTFPKYGLFLVGSTMNGFGSDNSDVDMCL-LVRHTEMDQR--------NEAIGHLEQILKCLKKCDFIEQLELIQAKVPILKFHDSMQNLEVDLNCNNAVGIRNTHLLYCYSQ 438
BLAST of poly rna polymerase gld2-a vs. nr
Match: gi|1000752310|ref|XP_015599027.1| (PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like isoform X2 [Cephus cinctus] >gi|1000752312|ref|XP_015599028.1| PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like isoform X2 [Cephus cinctus]) HSP 1 Score: 111.309 bits (277), Expect = 3.153e-24 Identity = 63/173 (36.42%), Postives = 99/173 (57.23%), Query Frame = 0 Query: 74 KYLSLSTTIQMDLPPCAWEESSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYSQ 246 ++L+ S IQ+ P S LS D+ F++N+Q +R K+ LW L + TFP + GST+NGFGS +SD+DMC+ L+ + DQ +++ L +++K + +E+I AKVPILK HD + ++ +D++CN+ +G+RNTHLLY YSQ Sbjct: 276 RFLARSHLIQVTHVPKDLLNGSHWDDLSRDVWEKFMSNQQTETTYRNKMMLWKYLYIYIKSTFPKYGLFLVGSTMNGFGSDNSDVDMCL-LVRHTEMDQR--------NEAIGHLEQILKCLKKCDFIEQLELIQAKVPILKFHDSMQNLEVDLNCNNAVGIRNTHLLYCYSQ 439
BLAST of poly rna polymerase gld2-a vs. nr
Match: gi|1000752306|ref|XP_015599025.1| (PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like isoform X1 [Cephus cinctus] >gi|1000752308|ref|XP_015599026.1| PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like isoform X1 [Cephus cinctus]) HSP 1 Score: 111.309 bits (277), Expect = 3.289e-24 Identity = 63/173 (36.42%), Postives = 99/173 (57.23%), Query Frame = 0 Query: 74 KYLSLSTTIQMDLPPCAWEESSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYSQ 246 ++L+ S IQ+ P S LS D+ F++N+Q +R K+ LW L + TFP + GST+NGFGS +SD+DMC+ L+ + DQ +++ L +++K + +E+I AKVPILK HD + ++ +D++CN+ +G+RNTHLLY YSQ Sbjct: 290 RFLARSHLIQVTHVPKDLLNGSHWDDLSRDVWEKFMSNQQTETTYRNKMMLWKYLYIYIKSTFPKYGLFLVGSTMNGFGSDNSDVDMCL-LVRHTEMDQR--------NEAIGHLEQILKCLKKCDFIEQLELIQAKVPILKFHDSMQNLEVDLNCNNAVGIRNTHLLYCYSQ 453
BLAST of poly rna polymerase gld2-a vs. nr
Match: gi|939655217|ref|XP_014276153.1| (PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like [Halyomorpha halys]) HSP 1 Score: 110.538 bits (275), Expect = 6.128e-24 Identity = 60/180 (33.33%), Postives = 97/180 (53.89%), Query Frame = 0 Query: 67 PSESRVGKYLSLSTTIQMDLPPCAWEESSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYSQ 246 P + ++L S + + PP S QLS ++ + F N+Q E F+KK+ LW L + FP + GST+NGFGS SD+DMC+ + + V+ +++ + ++ L L R + +E+I AKVP+LK D ++ +D++CN+ +G+RNTHLLY Y Q Sbjct: 259 PYYTAPDRFLQRSHLMPVTQPPEGLLNGSTWDQLSQNIWKKFFLNQQSEELFKKKMALWKFLYVQIKTCFPKYGLYLVGSTMNGFGSQFSDVDMCLIIRYSEVDQRNEA--VSYLSSILKLLERC-------ELFEKLELIQAKVPLLKFRDSKQNIQVDLNCNNSVGIRNTHLLYCYGQ 429
BLAST of poly rna polymerase gld2-a vs. nr
Match: gi|970919102|ref|XP_015126227.1| (PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like [Diachasma alloeum]) HSP 1 Score: 109.768 bits (273), Expect = 1.050e-23 Identity = 59/153 (38.56%), Postives = 92/153 (60.13%), Query Frame = 0 Query: 94 SSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYSQ 246 S++ +LS D+ FL+N+Q FR K+ LW L + T+P + GST+NGFGS SSD+DMC+ V + + R E I L +++ +K + + +I AKVPILK HDG+ ++ +D++CN+ +G+RNTH+LY YS+ Sbjct: 307 SARWDELSRDIWNKFLSNQQSEATFRNKMMLWKYLYIYIKSTYPRYGLFLVGSTMNGFGSDSSDVDMCLL-----VRNTEMIQRNEAICH-LDQIKNCLK---NCDFINQLTLIQAKVPILKFHDGMQNLDVDLNCNNAVGIRNTHMLYCYSR 450
BLAST of poly rna polymerase gld2-a vs. nr
Match: gi|805753291|ref|XP_012135155.1| (PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like isoform X4 [Megachile rotundata]) HSP 1 Score: 108.227 bits (269), Expect = 3.506e-23 Identity = 59/173 (34.10%), Postives = 98/173 (56.65%), Query Frame = 0 Query: 74 KYLSLSTTIQMDLPPCAWEESSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYSQ 246 ++L+ S +++ P S LS D+ F+ N+Q +R K+ LW L + FP + GST+NGFGS +SD+DMC+ + ++ +++ + ++Q L LRR + +E+I AKVPILK HD + ++ +D++CN+ +G+RNTHLLY YS+ Sbjct: 294 RFLARSHLVEVTHVPDELINGSIWDNLSKDVFSKFMVNQQTETIYRNKMMLWRYLYVYIKTAFPKYGLFLVGSTMNGFGSDNSDVDMCLLVRHTEMDQRNEA--IGHLEQILKCLRRC-------EFIEQLELIQAKVPILKFHDSIQNLEVDLNCNNAVGIRNTHLLYCYSR 457
BLAST of poly rna polymerase gld2-a vs. nr
Match: gi|805753275|ref|XP_012135119.1| (PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like isoform X2 [Megachile rotundata]) HSP 1 Score: 108.227 bits (269), Expect = 4.186e-23 Identity = 59/173 (34.10%), Postives = 98/173 (56.65%), Query Frame = 0 Query: 74 KYLSLSTTIQMDLPPCAWEESSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYSQ 246 ++L+ S +++ P S LS D+ F+ N+Q +R K+ LW L + FP + GST+NGFGS +SD+DMC+ + ++ +++ + ++Q L LRR + +E+I AKVPILK HD + ++ +D++CN+ +G+RNTHLLY YS+ Sbjct: 289 RFLARSHLVEVTHVPDELINGSIWDNLSKDVFSKFMVNQQTETIYRNKMMLWRYLYVYIKTAFPKYGLFLVGSTMNGFGSDNSDVDMCLLVRHTEMDQRNEA--IGHLEQILKCLRRC-------EFIEQLELIQAKVPILKFHDSIQNLEVDLNCNNAVGIRNTHLLYCYSR 452
BLAST of poly rna polymerase gld2-a vs. nr
Match: gi|805753278|ref|XP_012135126.1| (PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like isoform X3 [Megachile rotundata] >gi|805753282|ref|XP_012135135.1| PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like isoform X3 [Megachile rotundata] >gi|805753285|ref|XP_012135141.1| PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like isoform X3 [Megachile rotundata] >gi|805753288|ref|XP_012135149.1| PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like isoform X3 [Megachile rotundata]) HSP 1 Score: 107.842 bits (268), Expect = 4.354e-23 Identity = 59/173 (34.10%), Postives = 98/173 (56.65%), Query Frame = 0 Query: 74 KYLSLSTTIQMDLPPCAWEESSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYSQ 246 ++L+ S +++ P S LS D+ F+ N+Q +R K+ LW L + FP + GST+NGFGS +SD+DMC+ + ++ +++ + ++Q L LRR + +E+I AKVPILK HD + ++ +D++CN+ +G+RNTHLLY YS+ Sbjct: 282 RFLARSHLVEVTHVPDELINGSIWDNLSKDVFSKFMVNQQTETIYRNKMMLWRYLYVYIKTAFPKYGLFLVGSTMNGFGSDNSDVDMCLLVRHTEMDQRNEA--IGHLEQILKCLRRC-------EFIEQLELIQAKVPILKFHDSIQNLEVDLNCNNAVGIRNTHLLYCYSR 445
BLAST of poly rna polymerase gld2-a vs. nr
Match: gi|1061132341|ref|XP_017890577.1| (PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like isoform X3 [Ceratina calcarata]) HSP 1 Score: 107.842 bits (268), Expect = 4.523e-23 Identity = 60/173 (34.68%), Postives = 102/173 (58.96%), Query Frame = 0 Query: 74 KYLSLSTTIQMDLPPCAWEESSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYSQ 246 ++L+ S +++ P + S +LSTD+ F+ N+Q + KK+ LW L + TFP + GST+NGFGS +SD+DMC+ + ++ +++ + ++Q L L+R + +E+I AKVPILK HD + ++ +D++CN+ +G+RNTHLLY YS+ Sbjct: 297 RFLARSHLVEVTHTPEDLLDGSIWDRLSTDVWSKFMLNQQTENVYTKKMMLWRYLYIYIKGTFPKYGLFLVGSTMNGFGSDNSDVDMCLLVRHTEMDQRNEA--VGHLEQILKCLKRC-------DFIEQLELIQAKVPILKFHDSIQNLEVDLNCNNAVGIRNTHLLYCYSR 460
BLAST of poly rna polymerase gld2-a vs. nr
Match: gi|805753272|ref|XP_012135112.1| (PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like isoform X1 [Megachile rotundata]) HSP 1 Score: 107.842 bits (268), Expect = 4.547e-23 Identity = 59/173 (34.10%), Postives = 98/173 (56.65%), Query Frame = 0 Query: 74 KYLSLSTTIQMDLPPCAWEESSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYSQ 246 ++L+ S +++ P S LS D+ F+ N+Q +R K+ LW L + FP + GST+NGFGS +SD+DMC+ + ++ +++ + ++Q L LRR + +E+I AKVPILK HD + ++ +D++CN+ +G+RNTHLLY YS+ Sbjct: 294 RFLARSHLVEVTHVPDELINGSIWDNLSKDVFSKFMVNQQTETIYRNKMMLWRYLYVYIKTAFPKYGLFLVGSTMNGFGSDNSDVDMCLLVRHTEMDQRNEA--IGHLEQILKCLRRC-------EFIEQLELIQAKVPILKFHDSIQNLEVDLNCNNAVGIRNTHLLYCYSR 457 The following BLAST results are available for this feature:
BLAST of poly rna polymerase gld2-a vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of poly rna polymerase gld2-a vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 14
Pagesback to top
BLAST of poly rna polymerase gld2-a vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold959_size76551:29716..30592- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold959_size76551-snap-gene-0.21 ID=maker-scaffold959_size76551-snap-gene-0.21|Name=poly rna polymerase gld2-a|organism=Tigriopus kingsejongensis|type=gene|length=877bp|location=Sequence derived from alignment at scaffold959_size76551:29716..30592- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'poly rna polymerase gld2-a' has the following synonyms
Add to Basket
|