poly rna polymerase gld2-a, maker-scaffold959_size76551-snap-gene-0.21 (gene) Tigriopus kingsejongensis

Overview
Namepoly rna polymerase gld2-a
Unique Namemaker-scaffold959_size76551-snap-gene-0.21
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of poly rna polymerase gld2-a vs. L. salmonis genes
Match: EMLSAG00000008531 (supercontig:LSalAtl2s:LSalAtl2s526:109566:111701:-1 gene:EMLSAG00000008531 transcript:EMLSAT00000008531 description:"maker-LSalAtl2s526-augustus-gene-1.27")

HSP 1 Score: 51.6026 bits (122), Expect = 7.437e-8
Identity = 43/130 (33.08%), Postives = 68/130 (52.31%), Query Frame = 0
Query:  128 LEDLVSKTFPGGFAQV--FGSTLNGFGSSSSDMDMCIFL--ITNGVEDQSQLH---RLEFIKQSLFRLRRVIKKDLGHRILPDIEMIP----AKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYSQ 246
            LE  +S  F G F  +  FGS++N FGS  SD+DM I    +    +  SQL+   +  F ++++ ++   I  +L   I+P I  +     A+VPILK H  L ++  D+S +   GV  + LLY Y +
Sbjct:  252 LELCLSGLF-GTFVSILPFGSSVNSFGSCDSDLDMVINFSSLEKNDDSASQLYFHVKGGFGQRNMSQMYIRILANLLQDIVPGIRNVQSISNARVPILKYHHQLLNLECDLSASSLSGVFMSELLYLYGE 380          
BLAST of poly rna polymerase gld2-a vs. SwissProt
Match: gi|74868425|sp|Q9VD44.3|GLD2A_DROME (RecName: Full=Poly(A) RNA polymerase gld-2 homolog A; Short=DmGLD2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.994e-21
Identity = 58/174 (33.33%), Postives = 96/174 (55.17%), Query Frame = 0
Query:   74 KYLSLSTTIQMDLPPCAWEESSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGH-RILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYSQ 246
            ++L  +  ++M  PP      +K   LS  + + FL ++Q    ++ K+ LW ++  +  K +P     + GS+++ FGS  SDMD+C+   TN   D     R+E    +++ L  V+K+ LG   +  D  +I A+VPIL+  D    V +DI+ N+ +G+RNTHLLY YSQ
Sbjct:  910 RFLLRAKFVEMRRPPKVMGCKNKWDPLSLSVWKKFLESQQTRHVYKIKMRLWRAIYTVAMKNYPRYGLYLVGSSISYFGSKCSDMDICMLACTNPNIDS----RME----AVYHL-HVMKELLGRTNMFQDFNLIEARVPILRFTDRCHKVEVDINFNNSVGIRNTHLLYCYSQ 1074          
BLAST of poly rna polymerase gld2-a vs. SwissProt
Match: gi|82192766|sp|Q503I9.1|GLD2_DANRE (RecName: Full=Poly(A) RNA polymerase GLD2; AltName: Full=PAP-associated domain-containing protein 4)

HSP 1 Score: 84.3445 bits (207), Expect = 1.444e-17
Identity = 52/157 (33.12%), Postives = 84/157 (53.50%), Query Frame = 0
Query:   90 AWEESSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQS-QLHRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYS 245
            A+  SS + +LS  +   F A  Q  +   KK    A+L+  + K FP     + GS+LNGFGS SSD D+C+ +    V  +   ++ L  +++ L++L  + K           ++I AKVPI+K  D +S V  D++ N+ +G+RNT LL  Y+
Sbjct:  152 AFSPSSVKDKLSQQILNLFFACEQQSDDLEKKESCRAALQTDIQKIFPCAKVFLGGSSLNGFGSRSSDADLCLVIEEGPVNHRKDAVYVLSLVRKLLYKLSYIEKP----------QLIRAKVPIVKFRDRISGVEFDLNFNNTVGIRNTFLLRTYA 298          
BLAST of poly rna polymerase gld2-a vs. SwissProt
Match: gi|74957307|sp|O17087.2|GLD2_CAEEL (RecName: Full=Poly(A) RNA polymerase gld-2; AltName: Full=Defective in germ line development protein 2)

HSP 1 Score: 77.7962 bits (190), Expect = 3.595e-15
Identity = 52/163 (31.90%), Postives = 86/163 (52.76%), Query Frame = 0
Query:   87 PPCAW--EESSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDG--LSDVSIDISCNHPIGVRNTHLLYHYS 245
            PP +   E  S+   LS  +  +     Q  E  ++K+ L   L   +S  FP     V GS+LNGFG++SSDMD+C+ +ITN   DQ           ++  L  ++      + +   ++I AKVPIL+++      D+++D++ N+ + +RNTHLL +YS
Sbjct:  534 PPTSLLSEPLSRMDVLSEKIWDYHNKVSQTDEMLQRKLHLRDMLYTAISPVFPLSGLYVVGSSLNGFGNNSSDMDLCL-MITNKDLDQKN--------DAVVVLNLILSTLQYEKFVESQKLILAKVPILRINFAAPFDDITVDLNANNSVAIRNTHLLCYYS 687          
BLAST of poly rna polymerase gld2-a vs. SwissProt
Match: gi|123906238|sp|Q0VFA3.1|GLD2_XENTR (RecName: Full=Poly(A) RNA polymerase GLD2; AltName: Full=PAP-associated domain-containing protein 4)

HSP 1 Score: 70.4774 bits (171), Expect = 8.753e-13
Identity = 45/150 (30.00%), Postives = 75/150 (50.00%), Query Frame = 0
Query:   97 QSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQL-HRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYS 245
            + +LS  +   F A +Q     +KK    A L+  + + FP     + GS+LNGFG+ SSD D+C+ L    +   ++  H L  + +  +     I++          + I AKVPI+K  D +S    D++ N+ +G+RNT LL  Y+
Sbjct:  199 KDKLSKQILELFQALQQQVCDLKKKDICRAELQREIQQIFPQSRLYLVGSSLNGFGTRSSDADLCLVLKDEPMNQHTEARHILSLLHKHFYTRLSYIERP---------QFIKAKVPIVKFRDKVSGAEFDLNVNNVVGIRNTFLLRTYA 339          
BLAST of poly rna polymerase gld2-a vs. SwissProt
Match: gi|74871733|sp|Q9VYS4.1|GLD2B_DROME (RecName: Full=Poly(A) RNA polymerase gld-2 homolog B; AltName: Full=Protein wispy)

HSP 1 Score: 70.0922 bits (170), Expect = 1.370e-12
Identity = 52/180 (28.89%), Postives = 90/180 (50.00%), Query Frame = 0
Query:   74 KYLSLSTTIQMDLPPCAWEESSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSK-TFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHRILPDIE------MIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYSQ 246
            +YL+ +  I++ + P       K   LS ++ + F   +Q    F+ K+ LW  L   + +  F      + GST+ GFG+ SSD+DMC+ L   GV      +       +  R   +I   L + +L D E      +I A+VPIL+  D  + + +D++ N+ +G++NT+LL  Y+Q
Sbjct:  945 RYLAQARNIEVTVQPEKLICMCKYDNLSAEIWKRFRGAQQTHNKFKLKMRLWRYLYLWMHQPMFERYRICLVGSTITGFGTDSSDIDMCL-LPEQGVHPHQHQYHQHHHFHNEKRTEALIILTLFNAVLKDTEVFQDFNLIEARVPILRFKDISNGIEVDLNFNNCVGIKNTYLLQLYAQ 1123          
BLAST of poly rna polymerase gld2-a vs. SwissProt
Match: gi|67462100|sp|Q5VYS8.1|TUT7_HUMAN (RecName: Full=Terminal uridylyltransferase 7; Short=TUTase 7; AltName: Full=Zinc finger CCHC domain-containing protein 6)

HSP 1 Score: 69.707 bits (169), Expect = 1.905e-12
Identity = 46/120 (38.33%), Postives = 67/120 (55.83%), Query Frame = 0
Query:  127 SLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHR-ILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYS 245
            +LE  + + FPG    +FGS+ NGFG   SD+D+C  +  NG+E    L  +  I++    L RV++K  G R ILP   +  AKVPI+K     S + +DIS  + + + NT LL  YS
Sbjct: 1028 NLESFIRQDFPGTKLSLFGSSKNGFGFKQSDLDVC--MTINGLETAEGLDCVRTIEE----LARVLRKHSGLRNILP---ITTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYS 1138          
BLAST of poly rna polymerase gld2-a vs. SwissProt
Match: gi|259016375|sp|Q5BLK4.3|TUT7_MOUSE (RecName: Full=Terminal uridylyltransferase 7; Short=TUTase 7; AltName: Full=Zinc finger CCHC domain-containing protein 6)

HSP 1 Score: 68.5514 bits (166), Expect = 5.532e-12
Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = 0
Query:  127 SLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHR-ILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYS 245
            +LE  + + FPG    +FGS+ NGFG   SD+D+C  +  NG E    L  +  I++    L RV++K  G R ILP   +  AKVPI+K     S + +DIS  + + + NT LL  YS
Sbjct: 1024 NLESFIKQDFPGTKLSLFGSSKNGFGFKQSDLDVC--MTINGHETAEGLDCVRTIEE----LARVLRKHSGLRNILP---ITTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYS 1134          
BLAST of poly rna polymerase gld2-a vs. SwissProt
Match: gi|82182837|sp|Q6DFA8.1|GLD2B_XENLA (RecName: Full=Poly(A) RNA polymerase GLD2-B; Short=xGLD-2; AltName: Full=PAP-associated domain-containing protein 4-B)

HSP 1 Score: 67.781 bits (164), Expect = 7.645e-12
Identity = 45/150 (30.00%), Postives = 74/150 (49.33%), Query Frame = 0
Query:   97 QSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQL-HRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYS 245
            + +LS  +   F A +Q     +KK    A L+  + + FP     + GS+LNGFG  SSD D+C+ L    +   ++  H L  + +  +     I++          + I AKVPI+K  D +S    D++ N+ +G+RNT LL  Y+
Sbjct:  180 KDKLSKQILDLFQALQQQVCDLKKKDICRAELQREIQQIFPQSRLYLVGSSLNGFGIRSSDADLCLVLKEEPMNQNTEARHILSLLHKHFYTRLSYIERP---------QFIRAKVPIVKFRDKVSGAEFDLNVNNVVGIRNTFLLRTYA 320          
BLAST of poly rna polymerase gld2-a vs. SwissProt
Match: gi|82180930|sp|Q641A1.1|GLD2A_XENLA (RecName: Full=Poly(A) RNA polymerase GLD2-A; AltName: Full=PAP-associated domain-containing protein 4-A)

HSP 1 Score: 67.3958 bits (163), Expect = 9.482e-12
Identity = 45/149 (30.20%), Postives = 74/149 (49.66%), Query Frame = 0
Query:   97 QSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYS 245
            + +LS  +   F A +Q     +KK    A L+  + + FP     + GS+LNGFG+  SD D+C+ L    +   ++  ++  +   LF  R    + L        + I AKVPI+K  D +S    D++ N+ +G+RNT LL  Y+
Sbjct:  180 EDKLSQQILDLFQALQQQVCDIKKKDICRAELQREIQQIFPQSRLYLVGSSLNGFGTRISDADLCLVLKEEPMNQHTEATQILGLLHKLFYTRLSYIERL--------QFIRAKVPIVKFRDKVSGAEFDLNVNNVVGIRNTFLLRTYA 320          
BLAST of poly rna polymerase gld2-a vs. SwissProt
Match: gi|81879697|sp|Q91YI6.1|GLD2_MOUSE (RecName: Full=Poly(A) RNA polymerase GLD2; Short=mGLD-2; AltName: Full=PAP-associated domain-containing protein 4)

HSP 1 Score: 64.6994 bits (156), Expect = 7.105e-11
Identity = 49/158 (31.01%), Postives = 76/158 (48.10%), Query Frame = 0
Query:   97 QSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCI--------FLITNGVEDQSQLHRLEFI-KQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYS 245
            + +LS  +   F   +Q     +KK    A L+  +   FP     + GS+LNGFG+ SSD D+C+        F +    E +   H L  + K    RL   I++          ++I AKVPI+K  D +S V  D++ N+ +G+RNT LL  Y+
Sbjct:  153 KDKLSQQILELFETCQQQASDLKKKELCRAQLQREIQLLFPQSRLFLVGSSLNGFGARSSDGDLCLVVKEEPCFFQVNQKTEAR---HILTLVHKHFCTRLSGYIERP---------QLIRAKVPIVKFRDKVSCVEFDLNVNNTVGIRNTFLLRTYA 298          
BLAST of poly rna polymerase gld2-a vs. nr
Match: gi|1061132322|ref|XP_017890571.1| (PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like isoform X1 [Ceratina calcarata] >gi|1061132326|ref|XP_017890572.1| PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like isoform X1 [Ceratina calcarata] >gi|1061132329|ref|XP_017890573.1| PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like isoform X1 [Ceratina calcarata] >gi|1061132332|ref|XP_017890574.1| PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like isoform X1 [Ceratina calcarata] >gi|1061132335|ref|XP_017890575.1| PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like isoform X1 [Ceratina calcarata])

HSP 1 Score: 107.842 bits (268), Expect = 4.784e-23
Identity = 60/173 (34.68%), Postives = 102/173 (58.96%), Query Frame = 0
Query:   74 KYLSLSTTIQMDLPPCAWEESSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYSQ 246
            ++L+ S  +++   P    + S   +LSTD+   F+ N+Q    + KK+ LW  L   +  TFP     + GST+NGFGS +SD+DMC+ +    ++ +++   +  ++Q L  L+R          +  +E+I AKVPILK HD + ++ +D++CN+ +G+RNTHLLY YS+
Sbjct:  315 RFLARSHLVEVTHTPEDLLDGSIWDRLSTDVWSKFMLNQQTENVYTKKMMLWRYLYIYIKGTFPKYGLFLVGSTMNGFGSDNSDVDMCLLVRHTEMDQRNEA--VGHLEQILKCLKRC-------DFIEQLELIQAKVPILKFHDSIQNLEVDLNCNNAVGIRNTHLLYCYSR 478          
BLAST of poly rna polymerase gld2-a vs. nr
Match: gi|1061132338|ref|XP_017890576.1| (PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like isoform X2 [Ceratina calcarata])

HSP 1 Score: 107.842 bits (268), Expect = 5.097e-23
Identity = 60/173 (34.68%), Postives = 102/173 (58.96%), Query Frame = 0
Query:   74 KYLSLSTTIQMDLPPCAWEESSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYSQ 246
            ++L+ S  +++   P    + S   +LSTD+   F+ N+Q    + KK+ LW  L   +  TFP     + GST+NGFGS +SD+DMC+ +    ++ +++   +  ++Q L  L+R          +  +E+I AKVPILK HD + ++ +D++CN+ +G+RNTHLLY YS+
Sbjct:  301 RFLARSHLVEVTHTPEDLLDGSIWDRLSTDVWSKFMLNQQTENVYTKKMMLWRYLYIYIKGTFPKYGLFLVGSTMNGFGSDNSDVDMCLLVRHTEMDQRNEA--VGHLEQILKCLKRC-------DFIEQLELIQAKVPILKFHDSIQNLEVDLNCNNAVGIRNTHLLYCYSR 464          
BLAST of poly rna polymerase gld2-a vs. nr
Match: gi|1061132349|ref|XP_017890578.1| (PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like isoform X4 [Ceratina calcarata])

HSP 1 Score: 107.842 bits (268), Expect = 5.556e-23
Identity = 60/173 (34.68%), Postives = 102/173 (58.96%), Query Frame = 0
Query:   74 KYLSLSTTIQMDLPPCAWEESSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYSQ 246
            ++L+ S  +++   P    + S   +LSTD+   F+ N+Q    + KK+ LW  L   +  TFP     + GST+NGFGS +SD+DMC+ +    ++ +++   +  ++Q L  L+R          +  +E+I AKVPILK HD + ++ +D++CN+ +G+RNTHLLY YS+
Sbjct:  292 RFLARSHLVEVTHTPEDLLDGSIWDRLSTDVWSKFMLNQQTENVYTKKMMLWRYLYIYIKGTFPKYGLFLVGSTMNGFGSDNSDVDMCLLVRHTEMDQRNEA--VGHLEQILKCLKRC-------DFIEQLELIQAKVPILKFHDSIQNLEVDLNCNNAVGIRNTHLLYCYSR 455          
BLAST of poly rna polymerase gld2-a vs. nr
Match: gi|572312101|ref|XP_006621771.1| (PREDICTED: uncharacterized protein LOC102676065 [Apis dorsata])

HSP 1 Score: 106.301 bits (264), Expect = 1.979e-22
Identity = 59/173 (34.10%), Postives = 98/173 (56.65%), Query Frame = 0
Query:   74 KYLSLSTTIQMDLPPCAWEESSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYSQ 246
            ++L+ S  +++   P      S   +LS D+   F+ N+Q    +R K+ LW  L   +   FP     + GST+NGFGS +SD+DMC+ L+ +   DQ          +++  L +++K       +  +E+I AKVPILK HD + ++ +D++CN+ +G+RNTHLLY YS+
Sbjct:  637 RFLARSHLVEVTRTPDDLLNGSIWDKLSKDIWSKFMLNQQTETVYRNKMMLWRYLYVYIKTAFPKYGLFLVGSTMNGFGSDNSDVDMCL-LVRHTEMDQRN--------EAIGHLEQILKCLKRCDFIEQLELIQAKVPILKFHDSIQNLEVDLNCNNAVGIRNTHLLYCYSR 800          
BLAST of poly rna polymerase gld2-a vs. nr
Match: gi|820842386|ref|XP_012339496.1| (PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like isoform X3 [Apis florea] >gi|1032005039|ref|XP_016770424.1| PREDICTED: poly(A) RNA polymerase gld-2 homolog A isoform X3 [Apis mellifera] >gi|1035603249|ref|XP_016909092.1| PREDICTED: poly(A) RNA polymerase gld-2 homolog A-like isoform X3 [Apis cerana])

HSP 1 Score: 105.916 bits (263), Expect = 2.425e-22
Identity = 58/173 (33.53%), Postives = 99/173 (57.23%), Query Frame = 0
Query:   74 KYLSLSTTIQMDLPPCAWEESSKQSQLSTDMARFFLANRQDPEFFRKKIELWASLEDLVSKTFPGGFAQVFGSTLNGFGSSSSDMDMCIFLITNGVEDQSQLHRLEFIKQSLFRLRRVIKKDLGHRILPDIEMIPAKVPILKLHDGLSDVSIDISCNHPIGVRNTHLLYHYSQ 246
            ++L+ S  +++   P      S   +LS D+   F+ N+Q    +R K+ LW  L   +   FP     + GST+NGFGS +SD+DMC+ +    ++ +++   +  ++Q L  L+R          +  +E+I AKVPILK HD + ++ +D++CN+ +G+RNTHLLY YS+
Sbjct:  281 RFLARSHLVEVTRTPDDLLNGSIWDKLSKDIWSKFMLNQQTETVYRNKMMLWRYLYVYIKTAFPKYGLFLVGSTMNGFGSDNSDVDMCLLVRHTEMDQRNEA--IGHLEQILKCLKRC-------DFIEQLELIQAKVPILKFHDSIQNLEVDLNCNNAVGIRNTHLLYCYSR 444          
The following BLAST results are available for this feature:
BLAST of poly rna polymerase gld2-a vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000085317.437e-833.08supercontig:LSalAtl2s:LSalAtl2s526:109566:111701:-... [more]
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BLAST of poly rna polymerase gld2-a vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
gi|74868425|sp|Q9VD44.3|GLD2A_DROME5.994e-2133.33RecName: Full=Poly(A) RNA polymerase gld-2 homolog... [more]
gi|82192766|sp|Q503I9.1|GLD2_DANRE1.444e-1733.12RecName: Full=Poly(A) RNA polymerase GLD2; AltName... [more]
gi|74957307|sp|O17087.2|GLD2_CAEEL3.595e-1531.90RecName: Full=Poly(A) RNA polymerase gld-2; AltNam... [more]
gi|123906238|sp|Q0VFA3.1|GLD2_XENTR8.753e-1330.00RecName: Full=Poly(A) RNA polymerase GLD2; AltName... [more]
gi|74871733|sp|Q9VYS4.1|GLD2B_DROME1.370e-1228.89RecName: Full=Poly(A) RNA polymerase gld-2 homolog... [more]
gi|67462100|sp|Q5VYS8.1|TUT7_HUMAN1.905e-1238.33RecName: Full=Terminal uridylyltransferase 7; Shor... [more]
gi|259016375|sp|Q5BLK4.3|TUT7_MOUSE5.532e-1238.33RecName: Full=Terminal uridylyltransferase 7; Shor... [more]
gi|82182837|sp|Q6DFA8.1|GLD2B_XENLA7.645e-1230.00RecName: Full=Poly(A) RNA polymerase GLD2-B; Short... [more]
gi|82180930|sp|Q641A1.1|GLD2A_XENLA9.482e-1230.20RecName: Full=Poly(A) RNA polymerase GLD2-A; AltNa... [more]
gi|81879697|sp|Q91YI6.1|GLD2_MOUSE7.105e-1131.01RecName: Full=Poly(A) RNA polymerase GLD2; Short=m... [more]

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BLAST of poly rna polymerase gld2-a vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1061132322|ref|XP_017890571.1|4.784e-2334.68PREDICTED: poly(A) RNA polymerase gld-2 homolog A-... [more]
gi|1061132338|ref|XP_017890576.1|5.097e-2334.68PREDICTED: poly(A) RNA polymerase gld-2 homolog A-... [more]
gi|1061132349|ref|XP_017890578.1|5.556e-2334.68PREDICTED: poly(A) RNA polymerase gld-2 homolog A-... [more]
gi|572312101|ref|XP_006621771.1|1.979e-2234.10PREDICTED: uncharacterized protein LOC102676065 [A... [more]
gi|820842386|ref|XP_012339496.1|2.425e-2233.53PREDICTED: poly(A) RNA polymerase gld-2 homolog A-... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold959_size76551supercontigscaffold959_size76551:29716..30592 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold959_size76551-snap-gene-0.21-mRNA-1maker-scaffold959_size76551-snap-gene-0.21-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold959_size76551:29716..30592-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold959_size76551-snap-gene-0.21 ID=maker-scaffold959_size76551-snap-gene-0.21|Name=poly rna polymerase gld2-a|organism=Tigriopus kingsejongensis|type=gene|length=877bp|location=Sequence derived from alignment at scaffold959_size76551:29716..30592- (Tigriopus kingsejongensis)
ATGCTGGCAGACACCAGGATCACCATGCTGGCAGACACCAGGATCACCAT GCTGGCAGACACCAGGATCACCATGCTGGCAGACACCAGCATCACCATGC TGGCAGACACCAGGATCACCATACTGGCAGACACCAGGATCACCATACTG GCAGACACCAGGATCACCATACTGGCAGACACCAGCCAGGCCAGCCCCCC GTCGTCGATTTCAGGGAGTCTCGGGTGGGGAAATATCTCTCCTTGTCGAC CACAATTCAAATGGATCTCCCTCCGTGTGCCTGGGAAGAGTCCTCCAAGC AGTCTCAGCTGTCCACAGACATGGCTCGCTTTTTCCTGGCCAATCGTCAA GACCCCGAGTTCTTCCGGAAAAAGATTGAGCTGTGGGCGTCGTTGGAGGA TTTGGTGAGCAAGACGTTTCCAGGGGGCTTTGCTCAAGTCTTTGGCTCCA CCCTGAATGGCTTTGGATCGAGCTCCTCGGATATGGACATGTGCATCTTT CTCATCACGAATGGGGTGGAAGATCAGTCGCAGCTTCATCGGCTGGAGTT TATCAAGCAATCCCTATTCAGACTCCGAAGGGTGATCAAGTAAGGATAGT CAATTGGGTCGGCGCAAACTCACCACCTCGGGCTGGGGACACCCCAAGGC CCATATCACCGATTAAGTCTGGATATCAGCGTCACTTTTTGTTTCAATTC CGATTTGTCCTCCACAGAAAAGACCTCGGGCATCGAATACTACCCGACAT CGAAATGATCCCAGCCAAAGTGCCCATCCTCAAGCTCCATGACGGATTGT CGGATGTGAGCATCGACATCAGTTGCAATCACCCCATTGGTGTGAGGAAC ACCCATCTCCTCTATCACTACAGTCAG
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Synonyms
The feature 'poly rna polymerase gld2-a' has the following synonyms
Synonym
Tk01216
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