abc subfamily abcd, maker-scaffold96_size378025-snap-gene-0.23 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000005996 (supercontig:LSalAtl2s:LSalAtl2s324:163173:165128:-1 gene:EMLSAG00000005996 transcript:EMLSAT00000005996 description:"maker-LSalAtl2s324-augustus-gene-1.35") HSP 1 Score: 430.639 bits (1106), Expect = 1.239e-144 Identity = 242/601 (40.27%), Postives = 361/601 (60.07%), Query Frame = 0 Query: 4 TAHYGFNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIR--AGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAF--HQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPK-SELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARN-IRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDI 598 + YGFN +L RF+ L +++F A+ +++ + +LEQ + +G++ G++ + L D + F A + ++ + M + R+ + +L+V WRRSLT LH +YF FY L LDNPDQR+ +D LV YG+I++++++ PF I+YY Y +Y +GP GP +F FFL T +NK L++PVV VE +EGDFRF+H IR+ +ESLAF + E+ + D L LC Q+ L L+LAT F Y SI S+L++ IP+++G Y G + EL+ ++SE AFV + L+ +F++LV +A VSRLA VTHR+ E +E L+Q K N + S + S V+ + ++S+ P S L+ +LNL L + +LLI G SS GK+SLLRV+ GLW+ ++GS F V F+ Q PFFT+G+LR Q+ YPL+V+ + Q I+ L + GLGDLI R G+LD +P SW + LSPGE QR+A IR FH P++ LDEATSALS+D+E+L Y++ N I L+SVGHR+SLK++H + L I LS+G ++L +I Sbjct: 9 SKSYGFNLQFLHRFWHLQSLIFTDRINIGLAI--IILLICSLEQLVMYKIGMIPGQFIRALVSEDESKFVRAIVLSLIIVCFMTLVLSARILTSELLSVSWRRSLTRCLHSLYFFNTGFYTLK-----LDNPDQRIASDAECLVSIYGQILSEILLSPFVISYYIYDSYRGRGSGPYGPLIIFGFFLFGTFINKTLLTPVVNSGVEVRSKEGDFRFKHAEIRSQSESLAFLGQMGSFAEASRVDHLLEILCEAQRKLVLATYRLNLATNFFDYGASIISYLIVGIPVYNGFYKGLNVEELSGIISETAFVNIMLISKFSRLVDLAGKVSRLASVTHRVAEFVEKLSQEKIKDL--KDFDNHAESSPLLMNDSDDSSVSDETVLTLSNLSIGLPDISRKTLVSNLNLELKIGDNLLITGSSSCGKTSLLRVLRGLWNEKSGSYK--FGRKTVIFISQKPFFTNGSLRRQVTYPLEVVSSVSHDQFDIWIKMKLIKFGLGDLIDRVNGNLDAEPDKSWSEILSPGETQRMAIIRSLFHSPEILILDEATSALSLDMEELCYREVSYNNLITLISVGHRDSLKKFHSKHLQI-LSEGQYSLHEI 597
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000005788 (supercontig:LSalAtl2s:LSalAtl2s3118:3124:4893:1 gene:EMLSAG00000005788 transcript:EMLSAT00000005788 description:"augustus_masked-LSalAtl2s3118-processed-gene-0.0") HSP 1 Score: 417.927 bits (1073), Expect = 7.515e-140 Identity = 233/602 (38.70%), Postives = 353/602 (58.64%), Query Frame = 0 Query: 4 TAHYGFNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVL--DTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSV--SVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDL-DPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCL--ARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDI 598 T +Y N R +LHAI+ V L+G+ LEQ++ GLV+G + +VL +D GF+T + + I + V K R+YV ++L+V WRR+LT LH +YF +Y++NVL + GLDNPDQRMT+DV YGE+IA LI+ PFTI +YT+ AY R+G GP G+F++F++ +N LMSPV + E+ EGDFRF+H+ +R AE +AF SA +ES+K ++ L L +Q S++ ++ LDL F Y G+I S+L+IA+P+F+G YD +L +S+N+FVCM L++ +QLV +A+ + +AGVTHR+ EL+E L K N D D +I+++++ + +P + VLI +LNL + +LI G SS+GK+SLLR+I GLW GS+S F + FL Q P TDG+L + ++YP + + P T + LT L L + DL + W D LSPGEMQR+ FIR+F+H+P++ LDE+T++L ++E +LY+ + I ++SVGHR+SL++YH + L + +G W L+ I Sbjct: 10 TGNYRINWKLFVRIGKLHAII--SRNLINIFVTICLLGVCILEQYVGYKTGLVAGAFXEVLLNKDTEGFKTTAIHSFGVILGIAVVKTVRMYVAKILSVFWRRTLTTNLHNLYFDADSYYKVNVLIKELGLDNPDQRMTSDVDTFCLVYGEMIARLIISPFTIGFYTWDAYTRSGWIGPVGVFIYFILGCFVNLFLMSPVSQRVFFMEKNEGDFRFKHMFLREKAEEIAFSNSAIIESIKTNKLLKSLIKSQLSVYTWEILLDLWINIFDYVGAIISYLIIAVPVFTGFYDSLDQAKLGNQISQNSFVCMTLIYNLSQLVDLASKFANMAGVTHRMIELVEILE---------KHNSNPCFFKDNAICTNDKDPHMFETMINLENIILKIPSPTTPRVLIDNLNLNIKTGDRILITGASSSGKTSLLRLIRGLWPTVEGSIS--FFTDSIEFLSQRPLMTDGSLLQNMIYPSE---XPISPDLTW-FKDQLTRFNLDHLYKQ----YDLFQYQNRWEDILSPGEMQRICFIRVFYHRPQVVLLDESTASLPTNIEAMLYEYLIITCPKITILSVGHRDSLRKYHMKELQLQ-CNGEWELKQI 589
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000002016 (supercontig:LSalAtl2s:LSalAtl2s1361:43077:48755:-1 gene:EMLSAG00000002016 transcript:EMLSAT00000002016 description:"augustus_masked-LSalAtl2s1361-processed-gene-0.2") HSP 1 Score: 51.2174 bits (121), Expect = 9.001e-7 Identity = 55/222 (24.77%), Postives = 91/222 (40.99%), Query Frame = 0 Query: 392 PKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDK--------LSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQ----KCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDIPQD 601 PK E ++Q +NL + + +++G S +GK++L+ + TGSV + P V L Q P+ + T+++ I+ + R E +IA C D+D D LS G+ QRLA R + + F+D S+L + +++ K L + R V + E L HR + L DG + QD Sbjct: 738 PKCETNVLQSINLEIKTGSLTIVIGPSGSGKTALISSLIEEMDRITGSVKWNV-PDTVALLGQRPWLLNTTIKDNIL-----------------LGRPFKEKRYKKVIAACDLQTDIDLLPHGDDTEIGERGVLLSGGQRQRLAIARCLYSKSYCTFMDAPFSSLDSKITSHVFEEGVLKILLKRRRTVFLT-TERLDFLHRADHIVALKDGMIKAQGTIQD 940
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|81917721|sp|Q9QY44.1|ABCD2_RAT (RecName: Full=ATP-binding cassette sub-family D member 2; AltName: Full=Adrenoleukodystrophy-related protein) HSP 1 Score: 204.527 bits (519), Expect = 7.969e-56 Identity = 174/629 (27.66%), Postives = 283/629 (44.99%), Query Frame = 0 Query: 8 GFNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVW-KISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEI-------IADLIVVPFTIAYYTYSAYIRAGPAGPS---GMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTF--SYFGSIASFLVIAIPIFS--GLYDG-YSPGELAQVVSE--NAFVCMYLVFQ-----FTQLVQMAATVSRLAGVTHRI------------GELIEALAQMPGDG---GAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDI 598 G N + ++ L ILFP + L +L++YV + G+ K + E+ F + + + A V R Y+ L + +R L + YFA +Y++ +D L NPDQ +T D+ Q+ + I D+I+ +T+ S A P GP+ G+ V+ L K L E+ R+G R+ H I + E +AF++ +VE +K ++ + A Q +L + + + F Y S +++AIPI + G DG G +VS+ AF + +++ ++ LAG T R+ G + Q P + G G +P LSD + + G + I ++V ++ P E+V LN ++ LLI G + GKSSL R+++GLW P V P +F++PQ P+ + G+LR+Q++YP V + D+E +L V L ++ R GG D W D LS GE QR+ R+F+H+PK A LDE TSA+S+D+E ++Q + I L+S+ HR SL +YH +L +G W E + Sbjct: 79 GLNADFFKQLLELRKILFPKLVTTETGWLCLHSVALISRTFLSIYVAGLDGKIVKSIVEKKPRTFIIKLVKWLMIAVPATFVNSAIR-YLECKLALAFRTRLVDHAYETYFANQTYYKVINMDGRLANPDQSLTEDIMMFSQSVAHLYSNLTKPILDVILTSYTLIRTATSR--GASPIGPTLLAGLVVYATAKVL--KACSPKFGTLVAEEAHRKGYLRYVHSRIIANVEEIAFYRGHKVE-MKQLQKCYKALAYQMNLILSKRLWYIMIEQFLMKYVWSGCGLIMVAIPIITATGFADGDLEDGPKQAMVSDRTEAFTTARNLLASGADAIERIMSSYKEITELAGYTARVYNMFWVFDEVKRGIYKRTVTQEPENNSKSGGGLELP----LSDTLAI--KGTVIDVDHGILCENVPIITPAGEVV-ASSLNFKVEEGMHLLITGPNGCGKSSLFRILSGLW-PVYEGVLYKPPPQHMFYIPQRPYMSLGSLRDQVIYPDSVDDMHEKGYTDRDLEHILHSVHLYHIVQREGG---WDAVMDWKDVLSGGEKQRMGMARMFYHKPKYALLDECTSAVSIDVEGKIFQAAIGAGISLLSITHRPSLWKYHTHLLQFD-GEGGWRFEQL 689
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|78099209|sp|Q61285.1|ABCD2_MOUSE (RecName: Full=ATP-binding cassette sub-family D member 2; AltName: Full=Adrenoleukodystrophy-related protein) HSP 1 Score: 203.756 bits (517), Expect = 1.233e-55 Identity = 175/631 (27.73%), Postives = 283/631 (44.85%), Query Frame = 0 Query: 8 GFNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVW---KISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEI-------IADLIVVPFTIAYYTYSAYIRAGPAGPS---GMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTF--SYFGSIASFLVIAIPIFS--GLYDG-YSPGELAQVVSE--NAFVCMYLVFQ-----FTQLVQMAATVSRLAGVTHRI------------GELIEALAQMPGDG---GAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDI 598 G N + ++ L ILFP + L +L++YV + G+ K + E+ F + W I A V R Y+ L + +R L + YFA +Y++ +D L NPDQ +T D+ Q+ + I D+I+ +T+ S A P GP+ G+ V+ L K L E+ R+G R+ H I + E +AF++ +VE +K ++ + A Q +L + + + F Y S +++AIPI + G DG G +VS+ AF + +++ ++ LAG T R+ G + Q P + G +P LSD + + G + I ++V ++ P E+V + LN ++ LLI G + GKSSL R+++GLW P V P +F++PQ P+ + G+LR+Q++YP + D+ER+L V L ++ R GG D W D LS GE QR+ R+F+H+PK A LDE TSA+S+D+E ++Q + I L+S+ HR SL +YH +L +G W E + Sbjct: 79 GLNAAFFKQLLELRKILFPKLVTTETGWLCLHSVALISRTFLSIYVAGLDGKIVKSIVEKKPRTFIIKLIK--WLMIAIPATFVNSAIR-YLECKLALAFRTRLVDHAYETYFANQTYYKVINMDGRLANPDQSLTEDIMMFSQSVAHLYSNLTKPILDVILTSYTLIRTATSR--GASPIGPTLLAGLVVYATAKVL--KACSPKFGSLVAEEAHRKGYLRYVHSRIIANVEEIAFYRGHKVE-MKQLQKCYKALAYQMNLILSKRLWYIMIEQFLMKYVWSSCGLIMVAIPIITATGFADGDLEDGPKQAMVSDRTEAFTTARNLLASGADAIERIMSSYKEITELAGYTARVYNMFWVFDEVKRGIYKRTVTQEPENHSKRGGNLELP----LSDTLAI--KGTVIDVDHGIICENVPIITPAGEVVASR-LNFKVEEGMHLLITGPNGCGKSSLFRILSGLW-PVYEGVLYKPPPQHMFYIPQRPYMSLGSLRDQVIYPDSADDMREKGYTDQDLERILHSVHLYHIVQREGG---WDAVMDWKDVLSGGEKQRMGMARMFYHKPKYALLDECTSAVSIDVEGKIFQAAIGAGISLLSITHRPSLWKYHTHLLQFD-GEGGWRFEQL 689
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|75332181|sp|Q94FB9.1|AB1D_ARATH (RecName: Full=ABC transporter D family member 1; Short=ABC transporter ABCD.1; Short=AtABCD1; AltName: Full=Peroxisomal ABC transporter 1; Short=AtPXA1; AltName: Full=Protein ACETATE NON-UTILIZING 2; AltName: Full=Protein COMATOSE; AltName: Full=Protein PEROXISOME DEFECTIVE 3; Short=Ped3p) HSP 1 Score: 201.06 bits (510), Expect = 1.269e-53 Identity = 150/526 (28.52%), Postives = 260/526 (49.43%), Query Frame = 0 Query: 95 YVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVL----MSPVV-RLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTF--SYFGSIASFLVIAIPIFSGLY--DGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAAT---VSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLW--------SPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLD-----PKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTL 595 Y+T L++ +R+ LT +H YF + +Y+++ +D + +P+QR+ +DV ++I D + Y + A P ++F++++ +L SP +L ++++ EG++R H +RTH+ES+AF+ E ++ L + + H + Q F Y G+ + ++I P FSG D + G A+++S + ++ F L ++ + ++RL+G RI EL+ ++ GD + NRS + S N + V V+ P VL++DL L ++ ++LLI G + +GKSSL RV+ GLW P GS N ++F++PQ P+ GTLR+Q++YPL QE+ LLTE+G+ +L+ LD + +W D+LS GE QRL RLF+H+PK A LDE TSA++ D+E+ K A +++ HR +L +H +L++ +G W++ Sbjct: 168 YITGALSLRFRKILTKIIHSHYFENMVYYKISHVDGRITHPEQRIASDVPRFSSELSDLILDDLTAVTDGILYAWRLCSYASPK-----YIFWILAYVLGAGTAIRNFSPSFGKLMSKEQQLEGEYRQLHSRLRTHSESIAFYGGETREESHIQQKFKNLVSHMSHVLHDHWWFGM-IQDFLLKYLGATVAVILIIEPFFSGHLRPDDSTLGR-AEMLSNIRYHTSVIISLFQALGTLSISSRRLNRLSGYADRIHELMAVSRELSGDDKSSFQ-RNRSR-----------NYLSEANYVEFSDVKVVTPTGN-VLVEDLTLRVEQGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIVKPGVGSDLNK----EIFYVPQRPYMAVGTLRDQLIYPL------TSGQES----ELLTEIGMVELLKNVDLEYLLDRYQPEKEVNWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFAAKVRAMGTSCITISHRPALVAFHDVVLSLD-GEGGWSV 658 HSP 2 Score: 171.014 bits (432), Expect = 1.558e-43 Identity = 148/576 (25.69%), Postives = 252/576 (43.75%), Query Frame = 0 Query: 53 VGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQ----LALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDV---------FFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQE---------------TADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDIPQ 600 + ++G K + E+D A F +V + A + ++T+ L +GWR LT L R Y FY++ + + DQR+T D+ L ++ ++ I ++T+ + G G + ++ + L+ + + L E+++ EG FRF H + THAES+AF E D++ L L ++ + D T+ + L+ A+ + GELA + A V F ++++ L+G +RI EL E L ++S ++ E + Q +++ V ++ P +L + L+ + SLL+ G + +GK+S+ RV+ +W G ++ LD+ FF+PQ P+ GTLR+QI+YPL AE R + + ++ +L V L L+ R G D +W D LS GE QRL RLFFH+PK LDE T+A S+D+E+ LY+ + ++ R +L +H L + +G+W L I Q Sbjct: 780 IASLNGTTVKYVLEQDKAAFVRLIGLSVLQSGASSIIAPSLRHLTQRLALGWRIRLTQHLLRNYLRNNAFYKVFHMSGNSIDADQRLTRDLEKLTADLSGLLTGMVKPSVDILWFTWRMKLLTGQRGVAILYTYMLLGLGFLRRVAPDFGDLAGEEQQLEGKFRFMHERLNTHAESIAFFGGGAREKAMVDKKFRALLDHSLMLLRKKWLYGILDDFVTKQLPNNVTWGLSLLYALEHKGDRALVSTQGELAHALRYLASVVSQSFMAFGDILELHKKFLELSGGINRIFELDEFLD------------ASQSGVTSENQTSRLDSQ----DLLSFSEVDIITPAQKL-MASKLSCEIVSGKSLLVTGPNGSGKTSVFRVLRDIWPTVCGRLTK--PSLDIKELGSGNGMFFVPQRPYTCLGTLRDQIIYPLSKEEAEKRAAKLYTSGESSTEAGSILDSHLKTILENVRLVYLLERDVGGWD--ATTNWEDILSLGEQQRLGMARLFFHRPKFGVLDECTNATSVDVEEQLYRVARDMGVTFITSSQRPALIPFHSLELRLIDGEGNWELRSIEQ 1334
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|1351912|sp|P48410.1|ABCD1_MOUSE (RecName: Full=ATP-binding cassette sub-family D member 1; AltName: Full=Adrenoleukodystrophy protein; Short=ALDP) HSP 1 Score: 197.593 bits (501), Expect = 1.938e-53 Identity = 163/588 (27.72%), Postives = 269/588 (45.75%), Query Frame = 0 Query: 48 WLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVT--KCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYS----AYIR-AGPAGPSGM--FVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQ-TFSYFGSIASFLVIAIPIFSGLYDGYSPGEL----------AQVVSE--NAFVCMYLVFQFT-----QLVQMAATVSRLAGVTHRIGELIEALAQMP-------GDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNV---IHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDI 598 +L++YV + GR + + +D F L W + A+ T Y+ L + +R L + +YF++ +YR++ +D L NPDQ +T DV A + + ++L +A +Y+ A R AG A PS + V FL + +L + L E+ RR+G+ R+ H + ++E +AF+ VE L + + +L + Q Y S + L++A+PI + S E ++VSE AF + +++ V+ LAG T R+ E+ + + GD +A P S GP Q +V I +++ ++ P E+V + LN+ ++ LLI G + GKSSL R++ GLW P V P +F++PQ P+ + G+LR+Q++YP + +E +L V L ++ R GG + W D LS GE QR+ R+F+H+PK A LDE TSA+S+D+E ++Q I L+S+ HR SL +YH +L +G W E + Sbjct: 106 FLSVYVARLDGRLARCIVRKDPRAFSWQLLQ--WLLIALPATFINSAIRYLEGQLALSFRSRLVAHAYGLYFSQQTYYRVSNMDGRLRNPDQSLTEDVVAFAASVAHLYSNLTKPLLDVAVTSYTLLRAARSRGAGTAWPSAIAGLVVFLTANVL-RAFSPKFGELVAEEARRKGELRYMHSRVVANSEEIAFYGGHEVELALLQHSYQDLASQINLILLERLWYVMLEQFLMKYVWSASGLLMVAVPIITATGYAESDSEAMKKAALEMKEEELVSERTEAFTIARNLLTAAADATERIMSSYKEVTELAGYTARVYEMFQVFEDVKHCRFKRTGDLEEAQAGPGVMVQSGVHVEGPLKIQGQVVDVEQGIICENIPIITPTGEVV-VASLNIRVEEGMHLLITGPNGCGKSSLFRILGGLW-PTYSGVLYKPPPQRMFYIPQRPYMSVGSLRDQVIYPDSAEDMRRKGCSEQQLEAILGIVHLRHILQREGG---WEAVCDWKDVLSGGEKQRIGMARMFYHRPKYALLDECTSAVSIDVEGKIFQAAKDAGIALLSITHRPSLWKYHTHLLQFD-GEGGWKFEKL 684
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|114152863|sp|P41909.2|PXA1_YEAST (RecName: Full=Peroxisomal long-chain fatty acid import protein 2; AltName: Full=Peroxisomal ABC transporter 1) HSP 1 Score: 186.422 bits (472), Expect = 5.479e-49 Identity = 179/674 (26.56%), Postives = 302/674 (44.81%), Query Frame = 0 Query: 9 FNGLYLRRFYRLHAILFP-----GWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYK-VLGER------DWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYF-ARIKFYRL----NVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRA--GPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALD--------LATQTFSYFGSIASFLVIAIPI-FSGLYDGYSPGE--LAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIP--------------NRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPK-------------------------SELVLIQDLNLTLDLN--------TSLLIMGRSSAGKSSLLRVIAGLWS--PQTGSVSNHFSPLDVFFLPQSPFFT-DGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLS-DGHWTLEDIPQD 601 F +L + L IL P + + +F+L+ + WL+L+V + G+ K ++ R D + + A + SA+ + + R L++ +R +LT +H MY R+ FY+L ++ + N D +T DVA + A+ I P I +S Y+R G G +G+FV + ++ + + P+ +L E+ +GD+ H+++ ++E +AF+Q VE K E L + L +D L Y S ++ +IPI S L G + E + + + N + + L ++L+ +S+L G T+RI L+ L ++ A+P N +D + G + N I ++++ V+ P S+ IQDL+ D+ +SLLI+G + GKSS+ R+IA +W + G +S S ++FF+PQ P+F+ GTLR+QI+YP+ R ++ ++L EV L L+ R G LD W D LS GE QR+ F R+ FH+P LDEAT+A+S+D+ED L+ +S+ R +L +YH +L IG + DG W L+ + D Sbjct: 183 FYSKFLNQMNVLSKILIPTVFDKNFLLLTAQIFFLV-----MRTWLSLFVAKLDGQIVKNIIAGRGRSFLWDLGCWFLIAVPASYTNSAIKL-------LQRKLSLNFRVNLTRYIHDMYLDKRLTFYKLIFDAKASNSVIKNIDNSITNDVAKFCDATCSVFAN-IAKP-VIDLIFFSVYLRDNLGTVGVAGIFVNYFITGFILRKYTPPLGKLAGERSASDGDYYNYHLNMINNSEEIAFYQGTAVERTKVKE-------LYDVLMEKMLLVDKVKFGYNMLEDYVLKYTWSGLGYVFASIPIVMSTLATGINSEEKNMKEFIV-NKRLMLSLADAGSRLMHSIKDISQLTGYTNRIFTLLSVLHRVHSLNFNYGAVPSILSIRTEDASRNSNLLPTTDNSQDAIRGTIQRNFNGIRLENIDVIIPSVRASEGIKLINKLTFQIPLHIDPITSKSNSIQDLSKANDIKLPFLQGSGSSLLILGPNGCGKSSIQRIIAEIWPVYNKNGLLSIP-SENNIFFIPQKPYFSRGGTLRDQIIYPMSSDEFFDRGFRDKELVQILVEVKLDYLLKRGVGLTYLDAIADWKDLLSGGEKQRVNFARIMFHKPLYVVLDEATNAISVDMEDYLFNLLKRYRFNFISISQRPTLIKYHEMLLEIGENRDGKWQLQAVGTD 833
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|614130083|sp|P9WQI8.1|BACA_MYCTO (RecName: Full=Vitamin B12 transport ATP-binding protein BacA >gi|614130089|sp|P9WQI9.1|BACA_MYCTU RecName: Full=Vitamin B12 transport ATP-binding protein BacA) HSP 1 Score: 179.104 bits (453), Expect = 2.073e-47 Identity = 154/543 (28.36%), Postives = 243/543 (44.75%), Query Frame = 0 Query: 84 SAMVVTKCCRV----YVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADV-----------------AALVQTYGEIIADLIVVPFTIAYYTYSAYIRA-GPAGPSGMF----VFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQ--KCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDI 598 S M V RV Y+T+ + WR LT L + + +YR +D +DNPDQR+ DV A +G + + + V+ FT + S + G + P MF V+ V+T+++ ++ P++ L+ E+ FR+ V +R AE++ F++ RVE + R + + R +A + + S +++ A +F+G D G+ A + + A + RL G L++A + G+A+P + L+ P D +S + + + V P + LI L++ LD SL+I GRS AGK++LLR +A LW +G++ + FL Q P+ GTLR+ + YP A P T + LT+V L L R LD + W LSPGE QR+AF R+ +PK FLDE+TSAL LE LYQ + + ++SV HR +L+R H L + L G W L + Sbjct: 129 SVMAVLHVTRVMADIYLTQRFIIAWRVWLTHHLTQDWLDGRAYYRDLFIDETIDNPDQRIQQDVDIFTAGAGGTPNAPSNGTASTLLFGAVQSIISVISFTAILWNLSGTLNIFGVSIPRAMFWTVLVYVFVATVISFIIGRPLIWLSFRNEKLNAAFRYALVRLRDAAEAVGFYRGERVEGTQLQRRFTPVIDNYRRYVRRSIAFNGWNLSVSQTIVPLPWVIQAPRLFAGQIDFGDVGQTATSFGNIHDSLSFFRNNYDAFASFRAAIIRLHG-------LVDANEK-------GRALP--AVLTR------PSDDES----VELNDIEVRTPAGDR-LIDPLDVRLDRGGSLVITGRSGAGKTTLLRSLAELWPYASGTLHRPGGENETMFLSQLPYVPLGTLRDVVCYPNS---AAAIPDAT--LRDTLTKVALAPLCDR------LDEERDWAKVLSPGEQQRVAFARILLTKPKAVFLDESTSALDTGLEFALYQLLRSELPDCIVISVSHRPALERLHENQLEL-LGGGQWRLAPV 632
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|2492566|sp|Q57335.1|Y036_HAEIN (RecName: Full=Uncharacterized ABC transporter ATP-binding protein HI_0036) HSP 1 Score: 174.866 bits (442), Expect = 4.806e-46 Identity = 164/598 (27.42%), Postives = 259/598 (43.31%), Query Frame = 0 Query: 24 LFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYK----VLGERD----WAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGM----------FVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIF--SGLY--DGYSPGELAQVVSENAFVCMYLVF---QFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPL-DVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLAR--NIRLVSVGHRESLKRYHRQILAIGLSDGHW 593 L P + P F L+V + L ++ + LV+ +YK L E + W + A +SA +V+ Y+ + + W L L + A +Y+ L LDNPDQR+ DV + V+T + +I ++ YT + AGP G+ F + + +TL+ L P++ L ER ++R+ + I+ +AES+AF+ +VE + ++ ++ H + T FS F + S + + P+ G Y G+L Q + + L F + AT+ RL G + I + + + I N P + +++S+ P LI+ LN+TL TSLLI G+S AGK++LLR IAGLWS G ++ P + FL Q P+ G L + YP + + +I L +V LG L + L+ + W LS GE QRLAF RL H+P +AFLDEAT+++ LE +YQ ++SVGHR +LK H+Q L + G W Sbjct: 50 LSPKRSIKPILFFLLIVAMTLL----SVRISLVNSEWYKNMYTSLQEFNEHVFWQQMGLFCVIAASSVSAALVS----YYLEQRFVINWIEWLNEQLVNKWMAHRAYYKTQYLSENLDNPDQRIQQDVQSYVKTTLSLSTGVIDAVTSMISYTILLWGLAGPMIVLGVEIPHMMVFLVFGYVIFTTLIAFWLGRPLISLNFINERLNANYRYSLIRIKEYAESIAFYAGEKVEKNQLYQQF-------NAVIHNMWVIIFRTLKFSGFNLVVSQISVVFPLLIQVGRYFEKQIKLGDLMQTLQVFGQLHANLSFFRSTYDNFASYKATLDRLTGFCYAIEK---------ANNKSQTQIHNH------------------PTDVIFKNLSIQNPLGH-TLIKHLNITLPQGTSLLIQGKSGAGKTTLLRTIAGLWSYAEGEIN---CPTHNQLFLSQKPYVPQGNLMSALAYPNN--ADNISHTQAVEI---LNKVQLGHLAEQ------LEKEQDWTRILSLGEQQRLAFARLILHKPAVAFLDEATASMDEGLEFSMYQLLQQELPQTTIISVGHRSTLKTLHQQQLILQ-DKGQW 589
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|74997115|sp|Q54W20.1|ABCD3_DICDI (RecName: Full=ABC transporter D family member 3; AltName: Full=ABC transporter ABCD.3) HSP 1 Score: 174.481 bits (441), Expect = 3.231e-45 Identity = 119/387 (30.75%), Postives = 196/387 (50.65%), Query Frame = 0 Query: 237 VESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGG------------AGKAIPNR-------SALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQ-------ETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLED 597 VE +A ++ L ++ + Q L+ + F++F + ++ +I+IP+F + E AQV + ++ C+ L F+Q + ++ ++S L+G RI +IE ++ GD K++PN ++++ + R + +S I + V+ PK L + +++ + +LLIMG S +GKSSL+R+I GLW GS+ N D+FFLPQ P+ GTL EQI+YP + P+ + DI+ LL I + DL +W ++LSPGE Q +A IRL +H+PK A +DE+TS++ LE+ +Y I ++SVGHR SL +YH +L D +W LED Sbjct: 350 VEEEQAKQQFEALLKNKKRVIFWQFGLNTTSDMFTFFSPLINYFIISIPVF--FLSSKAALEPAQVTVQ-SYNCIMLASGFSQYINVSQSISDLSGYISRISTMIEVCKKVMGDTSLDIEITKLNEKDKTKSLPNSLIINNRDTSINTDFRHISLNEGES----ITLDDVTYFTPKGT-QLYEKISICIKKGNNLLIMGPSGSGKSSLIRIINGLWPFFKGSI-NRPENEDMFFLPQQPYLIFGTLEEQILYPFSKKQKRI-PKSIMRELFQRFDIDYLLDR---ERFIKKSAQVNDLTH--NWLNQLSPGEQQLIAIIRLIYHKPKFALMDESTSSIPQSLEERVYSVAKELGITIISVGHRISLLKYHSTLLRFD-KDKNWYLED 720 HSP 2 Score: 114.39 bits (285), Expect = 2.576e-25 Identity = 61/234 (26.07%), Postives = 116/234 (49.57%), Query Frame = 0 Query: 9 FNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKA 242 F+ +RF ++ IL+ P +F LL G + +++ + G++ Y L D F ++ + + I + ++ ++ WR++L + + +YF + FY++ D +DNPDQR+T+D+ I++ I P + YYTY Y P ++ +F + +NK++MSP+V + Q++ EGDFR+ H IR +ES+A + ++ + K Sbjct: 52 FDWALFKRFIKIVIILYEK-PVIPLLLFLLLFGSGVSQTYISKFTGILLSNIYGSLTSGDKFLFVSSLIKGCFAIGGSALFDAIIKFIVSIMAWNWRKTLCLYIQNVYFKKSLFYKILAFDDRIDNPDQRITSDIDNFTTLLSSIVSQCITGPMVVVYYTYLCYTTIDWYAPLIVYGYFFLGYFINKLVMSPMVSINYLQDKLEGDFRYLHQRIRNFSESIALYNLSKEKQQKK 284
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|1175812|sp|P45221.1|Y1467_HAEIN (RecName: Full=Uncharacterized ABC transporter ATP-binding protein HI_1467) HSP 1 Score: 168.703 bits (426), Expect = 5.662e-44 Identity = 139/527 (26.38%), Postives = 235/527 (44.59%), Query Frame = 0 Query: 75 ATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLI-----VVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMS-----PVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSE-NAFVCMYLVFQ--FTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLAR--NIRLVSVGHRESLKRYHRQILAI 586 A L+A+ + A V+ + ++ + W S L + + + K+YRL DN DQR+ D + + +I+ +I + FTI ++ S + VFF+ + ++ LMS P+++L +E+ GD+R+ + +R +AES+AF+ E + ++ + S+ + L L+ + + ++ A FSG G++ Q V N + F+ + Q A ++RL G ++ EL + P A+ N + DE H+ ++ +LLI G S GK+SLL+ IAG++ +T ++ H + FLPQ P+ GTLRE I YP + P A++E+ + + LG I L+ K W LSPGE+QR+AFIR+ +P + FLDE TSAL E+LLYQ R + ++SVGHR +L+++H + L + Sbjct: 101 AKLNALL-VVAQVIHAIADYFFQQVFEIRWLESFNATLVKRWLNKKKYYRLKYERDLPDNIDQRIEQDAREFITSTVQIVRGVINSVLTTIEFTIILWSLSGVLTLFGFNIEKGVVFFIYAFIIFATLMSVWIGRPLIKLNFTKEKLNGDYRYSLIRVRDNAESIAFYNGEPKEQTFLQHQFRQIIHNRWSIVLKMLGLNSFNSGVTRVAKLLPLMLQAPRFFSG---QIKLGDMHQTVQAFNRLMTALSFFRLFYEQFTLYQARLNRLYGFITKMDELDKQNVHHPFHCSHRVALKN-FGIKDEQG--------------HVLLNNLNINLEN-------------GDALLIQGASGTGKTSLLKAIAGIYPFETIGIAEH-PCMGSLFLPQRPYMPQGTLREAICYP------NINPSH-AELEQTMKDCALGKYIH------ALNVKNDWQAILSPGELQRVAFIRILLTKPDVVFLDETTSALDETTENLLYQTIKERLPEMIILSVGHRSTLQQFHNKQLKL 581
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|74997114|sp|Q54W19.1|ABCD1_DICDI (RecName: Full=ABC transporter D family member 1; AltName: Full=ABC transporter ABCD.1) HSP 1 Score: 168.703 bits (426), Expect = 2.487e-43 Identity = 119/381 (31.23%), Postives = 189/381 (49.61%), Query Frame = 0 Query: 237 VESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYS---PGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIP----------NRSALSDEMRVGPPGD-QKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQ------ETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLED 597 VE +A + L ++ + QL L+ + F+Y IA++ +IAIP+F + S PG+ V+ ++ C+ L F+Q + ++ ++S L+G RI +IE ++ D I N A+ + G G+ + + I + V+ PK L +++ + +LLIMG S +GKSSL+R+I GLW GS+ + D+FFLPQ P+ GTL EQI+YP + + +I+ LL I + DL +W ++LSPGE Q +A IRL +H+PK A +DE+TS++ LE+ +Y I ++SVGHR SL +YH +L D +W LED Sbjct: 342 VEEEQAKIQFEALLKNKKRVIFWQLGLNTTSDLFTYLSPIANYFIIAIPVF--FLNNKSVLQPGD----VTVQSYNCIMLASGFSQYINVSQSISDLSGYISRISSMIEVCKKIMEDVSLDADITKLNEKVAQTHNNDAI---INTGSSGNISLNNGDSITLDDVTYFTPKGN-QLYSKISINVKRGNNLLIMGPSGSGKSSLIRIINGLWPFFKGSIDRPENG-DMFFLPQQPYLIFGTLEEQILYPFSKKQKRIPKSIMRELFQRFEIDYLLDR---ERFIKKSAQVNDL--THNWLNQLSPGEQQLIAIIRLIYHKPKFALMDESTSSIPQSLEERVYYVAKELGITIISVGHRISLLKYHSTLLRFD-KDKNWYLED 705 HSP 2 Score: 119.398 bits (298), Expect = 6.240e-27 Identity = 62/228 (27.19%), Postives = 113/228 (49.56%), Query Frame = 0 Query: 9 FNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSAR 236 F+ +RF + IL+ P +F +L G + +++ + G++ Y D F ++ L A + I + ++ ++ WR++L + + +YF + FY++ D +DNPDQR+T+D+ I++ I P + YYTY Y P ++ FF + L+NK++MSP+V + Q++ EGDFR H IR +ES+A + ++ Sbjct: 41 FDWALFKRFINIIKILYAK-PVIPLTLFLILFGNGFAQTYVSKFTGILLADIYASFTSGDKVFFLSSVLKAGFAIGGSALLAAIINFIVSIMAWNWRKTLCLYIQNVYFKKSLFYKILAFDDRIDNPDQRITSDIDNFTTLLASIVSQCITGPMVVVYYTYLCYTTIDWYAPLIVYGFFFLGYLINKLVMSPMVSINYLQDKLEGDFRSLHQRIRNFSESIALYSLSK 267
BLAST of abc subfamily abcd vs. nr
Match: gi|586962540|gb|AHK05658.1| (ATP-binding cassette transporter sub-family D member 4 isoform X2 [Tigriopus japonicus]) HSP 1 Score: 875.544 bits (2261), Expect = 0.000e+0 Identity = 427/608 (70.23%), Postives = 502/608 (82.57%), Query Frame = 0 Query: 1 MSDTAHYGFNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLD-TGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGD-GGAGKAIPNRSALSDEMR---VGPPGDQKSTPNVIH---IQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDIPQ 600 M+D HYGFN LYLRRFYRLH +LFPGW + +A+ LLV L+ LEQWLALYVGL+SG YYKVLG++DW+GF+T TLDA KI AMV+TK RVYVT ++TVGWRRSLTMALH+MYFARI++YRLNVLD +GLDNPDQR+TADV+ L Q+YG IIADLIVVPFTI+YYTYSAY RAGPAGP+GMF+FFL ST++NK+LMSPVVRLTVEQERREGDFRF+HV++RTHAESLAFH+SARVES+K+DE+LL LC TQQSLF+RQLALDLAT FSY GSIASFLVIAIPIFSG+YD SP +LAQ VSENAFVCMYLVFQFT+LVQMA+TVSRLAGVTHRI E+ E L M G+ N S D+ + V P +P H +++V ++ PKS LI++LNL LDL ++LLI+G+SSAGKSSLLRVIAGLW G + + S LDVFFLPQ PFFTDGTLREQIVYPLQV+ +++ PQE+ D+ +L EVGLGDL RCGGSLD DPKWSW DKLSPGEMQRLAFIRLF+H PK+AFLDE+TSALS+DLEDLLY+KCL +NI LVSVGHRE+L++YH Q+L IGLSDG WTL I + Sbjct: 1 MADN-HYGFNTLYLRRFYRLHGLLFPGWRSLNAALMVLLVILSGLEQWLALYVGLISGGYYKVLGDQDWSGFKTTTLDATLKIMAMVITKSVRVYVTNVMTVGWRRSLTMALHQMYFARIRYYRLNVLDESGLDNPDQRITADVSLLCQSYGSIIADLIVVPFTISYYTYSAYTRAGPAGPTGMFLFFLASTIINKLLMSPVVRLTVEQERREGDFRFKHVTVRTHAESLAFHKSARVESIKSDEKLLSLCQTQQSLFNRQLALDLATNVFSYMGSIASFLVIAIPIFSGVYDNLSPSQLAQAVSENAFVCMYLVFQFTKLVQMASTVSRLAGVTHRIAEMTEVLINMNRSFHCQGRKSSNNSEDEDQDKLVAVVPDPKPSESPLKNHSLILENVDLITPKSRKKLIRNLNLALDLGSNLLIVGQSSAGKSSLLRVIAGLWPLDRGVIQRNLSDLDVFFLPQQPFFTDGTLREQIVYPLQVLTSQIDPQESVDLLNILEEVGLGDLPKRCGGSLDTDPKWSWYDKLSPGEMQRLAFIRLFYHCPKMAFLDESTSALSLDLEDLLYKKCLEKNIALVSVGHRETLRQYHDQLLTIGLSDGQWTLTPISR 607
BLAST of abc subfamily abcd vs. nr
Match: gi|586962538|gb|AHK05657.1| (ATP-binding cassette transporter sub-family D member 4 isoform X1 [Tigriopus japonicus]) HSP 1 Score: 552.362 bits (1422), Expect = 0.000e+0 Identity = 279/609 (45.81%), Postives = 392/609 (64.37%), Query Frame = 0 Query: 2 SDTAHYGFNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTG-LDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGH-----------WTLEDI 598 S +YGFN +L R +LH LFP WT+ P +F ++ + LE+++ YVGL+S YY+VLG++D+ F TL ++ I + K R++ M+ V WR ++T L++ YF FY +N+L G L N DQR+TADV++ TYG IIAD++V P TI YYTY AY RAG GP GMF+FF++ST++NK+LMSPVV + EQ+++EG+FRFQHVS R H+ESLAF + V K L RLC +Q+ +F+ Q L+LAT F Y SIASFLVIA+P+FSG YD + EL+ ++SENAFVC+ L++QF++LV ++ VS + G HRI ELIE + D A NR D + + P D K + +V V +P + LI+DL+L ++L +LL+MG SS GKSSLLRVI GLW G++ + L +LPQ P+ G+L+E +++P+ + + ++ I+ L+TE GL ++ RCGG+LD DP+W+W D +SPGE+QRLAFIRLF+H+P LAFLDE+TSALS+ +E+ LY+KC I VSVGHRE+LK+YH +IL I H WTL D+ Sbjct: 7 SVVKYYGFNWQFLVRVTKLHKFLFPSWTSIPVFLFVFILLVRCLEEYVGYYVGLISSDYYQVLGDKDFDAFVQVTLKSLGMIVLIAFIKTTRIWFQEMIVVSWRLAMTTTLNQKYFQHHSFYHINILGRGFLGNADQRITADVSSFCSTYGFIIADILVSPLTIGYYTYDAYTRAGWIGPLGMFLFFVISTVINKLLMSPVVNASAEQDKQEGEFRFQHVSTRIHSESLAFQDGSEVNLEKIQGSLRRLCRSQRRVFNLQFFLNLATNLFQYVSSIASFLVIAVPLFSGAYDDLTGSELSSLISENAFVCINLIYQFSKLVNISPYVSEMGGAAHRIAELIETFQSLEMD----HANKNR----DGIGMSPYLDPKVA---FRLTNVDVRSPGMDRPLIKDLSLDIELGQNLLVMGPSSCGKSSLLRVIKGLWPISNGAIEVN-PDLKAIYLPQRPYMMSGSLKELVLHPIDTLQCSLTIEDEQRIKDLVTEFGLDHILERCGGNLDYDPQWNWSDVMSPGELQRLAFIRLFYHKPALAFLDESTSALSLSVEEKLYEKCSKMGITCVSVGHRETLKKYHTKILEIKEESDHNASTHVNTNALWTLRDL 603
BLAST of abc subfamily abcd vs. nr
Match: gi|1022773295|gb|KZS17405.1| (ABC protein, subfamily ABCD [Daphnia magna]) HSP 1 Score: 529.25 bits (1362), Expect = 5.530e-179 Identity = 282/604 (46.69%), Postives = 393/604 (65.07%), Query Frame = 0 Query: 3 DTAHYGFNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQM--------PGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFS--PLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLE 596 D +GFN + RRF+RL +LFPG + P +F LL+ +A L++++ VGL+ +Y+VLGE+D GF TL +V I A+ V K + Y++++L + WR+ LT A+HR+YF I +Y+LNVLD +DNPDQR+TAD+ L + + ++V PFTIAYY+Y AY+ G GP+ F+FF+V T +NK+LMSP+V V ERREGDFR++H+ IR++AESLAF AR+E K + +L L TQ SL+ RQ L+LA F Y GSI S+L +A+PIFSG YDG S EL+ ++S+NAFVC+YL+ F+ LV ++++V++LAGVTHR+ ELIE L Q+ PGD S VG D K + ++ V+ AP L+++L L L SLLI G SSAGK+SLLR++ GLW G+++ H + P V FLPQ P+ TDGTLREQI +PL V + + ET ++ L ++ L L+ R GG LD +W+W D LSPGEMQRL+FIRL +H+P +AFLDEATSAL M++E LLY + + I L+SVGHRESL+ +H+ +L + DG WTLE Sbjct: 9 DGKDHGFNVNFFRRFWRLQHLLFPGVFSLPLGLFSLLLLVALLDEFIIYGVGLIPSGFYQVLGEKDLPGFINQTLRSVGIILAVAVNKAIKTYISQVLNLTWRQLLTRAVHRLYFTDINYYQLNVLDKFVDNPDQRITADINILCLVFSSVAIKVVVSPFTIAYYSYKAYVGTGWVGPTSCFLFFIVGTFVNKLLMSPIVAWVVRNERREGDFRYKHMQIRSNAESLAFLTGARLEESKTNNKLDLLLTTQHSLYGRQFFLNLAVNMFDYLGSIISYLALAVPIFSGRYDGLSSAELSALISQNAFVCIYLISTFSTLVDLSSSVTQLAGVTHRVSELIERLQQLYDRSDAETPGDLKVVSVCKKNS-------VGTMDDMKQEGYL--MEGVAFKAPGRSEDLVKELYLHLRPGESLLITGSSSAGKTSLLRLLRGLWKLNRGTLTAHCTPGPCGVLFLPQKPYLTDGTLREQITFPLSVDLDLIPNDETEELLSYLHKMKLDGLMTRIGG-LDRPAEWNWYDVLSPGEMQRLSFIRLLYHKPAMAFLDEATSALDMEMEQLLYSAAVDKGITLISVGHRESLRAFHKNLLHLK-GDGSWTLE 601
BLAST of abc subfamily abcd vs. nr
Match: gi|321453858|gb|EFX65057.1| (ABC protein, subfamily ABCD [Daphnia pulex]) HSP 1 Score: 516.538 bits (1329), Expect = 3.295e-174 Identity = 277/600 (46.17%), Postives = 395/600 (65.83%), Query Frame = 0 Query: 3 DTAHYGFNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFS--PLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDIPQ 600 D +GFN + RRF+RL +LFPG + P +F LL+ +A L++++ VGL+ +Y+VLGE+D+ GF TL +V I A+ V K + Y++++L + WR+ LT A+HR+YF I +Y+LNVLD +DNPDQR+TAD+ L + + ++V PFTI+YY+Y AY+ G GP+ F+FF+V T++NK+LMSP+V V+ ERREGDFR++H+ IR++AESLAF AR+E K + +L L TQ SL+ RQ L+LA F Y GSI S+L +A+PIFSG YD SP EL+ ++S+NAFVC+YL+ F+ LV ++++V++LAGVTHR+ ELIE + N + + DE+ G ++ V+ AP L++DL L L SLLI G SSAGK+SLLR++ GLW G+++ H++ P V FLPQ P+ TDGTLREQI +PL V + + ET ++ L ++ L L++R GG LD +W+W D LSPGEMQRL+FIRL +H+P +AFLDEATSAL M++E LLY + + I LVSVGHR SL+ +H+++L + DG WTLE I Sbjct: 9 DARDHGFNVSFFRRFWRLQHLLFPGIFSLPLGLFALLLLVALLDEFIIYGVGLIPSGFYQVLGEKDFPGFINQTLKSVGIILAVAVNKAVKTYISQILNLTWRQLLTRAVHRLYFTGINYYQLNVLDKFVDNPDQRITADINILCLVFSSVAIKVVVSPFTISYYSYKAYVGTGWVGPTSCFLFFIVGTVVNKLLMSPIVAWVVKNERREGDFRYKHMQIRSNAESLAFLTGARLEESKTNNKLDVLLKTQHSLYGRQFFLNLAVNMFDYLGSIISYLALAVPIFSGRYDDISPAELSSLISQNAFVCIYLISTFSTLVDLSSSVTQLAGVTHRVSELIEL---------SISTTKNTTGMFDEVNTEDDG--------YFMEGVAFKAPGRTDELVKDLCLHLKPGESLLITGSSSAGKTSLLRLLRGLWRLSRGNLTAHYTPGPCGVLFLPQKPYLTDGTLREQITFPLSVDLELITNDETEELLNYLQKMKLDGLMSRIGG-LDRPVEWNWYDVLSPGEMQRLSFIRLLYHRPAMAFLDEATSALDMEMEQLLYSAAVDKGITLVSVGHRASLRAFHKKVLHLK-GDGSWTLESISN 589
BLAST of abc subfamily abcd vs. nr
Match: gi|677547160|gb|KFR08121.1| (ATP-binding cassette sub-family D member 4, partial [Nipponia nippon]) HSP 1 Score: 497.278 bits (1279), Expect = 8.023e-167 Identity = 262/587 (44.63%), Postives = 371/587 (63.20%), Query Frame = 0 Query: 11 GLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVS--NHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTL 595 GL+LRRF RL A+LFPGW + + +F L+ +A LEQ + VG++ +YY+VLG +D++GF+T T A+ I K ++ M+ V WR+SLT LH YF +Y L+VL +DNPDQR++ DV + + + LI+ PFT+AYYTY + G GP G+F +F++ T++NKVLMSP+V V+QE+ EGDFRF+H+ IR +AE AF+++ RVE ++ + RL L TQ+ L ++L L + TF Y GSI S++VIAIPIFSG+Y SP EL+ +VS+NAFV +YL+ F+QL+ +++T++ +AG THRIGEL E L + + S D G + T + ++ V++ P S +LI+DL+L + S++I+G + GK+SLLRV+ GLW GS+ F P V FLPQ PFFTDG+LREQ++YPL+ I + I R L GL DL+AR GG LD W+W D LSPGEMQRL+F RLF+ QPK A LDEATSAL+ ++E LY+ CL + L+SVGHR SL+++H IL + +G W L Sbjct: 4 GLFLRRFLRLQAVLFPGWPSPGALMFLTLLCVALLEQLVIYQVGVIPSQYYEVLGNKDFSGFQTLTAVALTLIVVNSTLKSFDQFICNMMYVSWRKSLTEYLHSCYFQGQVYYSLHVLREDIDNPDQRISQDVERFCRQLSSMASKLIISPFTLAYYTYQCFHSTGWLGPVGIFGYFIIGTIVNKVLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGRVEHMRTNRRLQSLLQTQRELIGKELWLYIGINTFDYLGSILSYVVIAIPIFSGVYSDLSPTELSALVSKNAFVSIYLISCFSQLIDLSSTMTDIAGYTHRIGELQETLLSLGRKKNGNYSEAKASWDLDGSHTGEDSVPRDTAFL--MERVTLSVPSSGKLLIKDLSLRISQGNSVMIVGNTGTGKTSLLRVLGGLWESTQGSIKMLTCFGPRGVVFLPQRPFFTDGSLREQVIYPLKDIYPVSGSADDERIVRFLEVAGLTDLLARAGG-LDEQVDWNWYDILSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVEQELYRVCLQLGMTLISVGHRASLEKFHSWILKLH-GEGRWEL 586
BLAST of abc subfamily abcd vs. nr
Match: gi|768348572|ref|XP_011571114.1| (PREDICTED: ATP-binding cassette sub-family D member 4 isoform X1 [Aquila chrysaetos canadensis]) HSP 1 Score: 497.664 bits (1280), Expect = 1.766e-166 Identity = 265/589 (44.99%), Postives = 372/589 (63.16%), Query Frame = 0 Query: 9 FNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVS--NHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTL 595 +GL+LRRF RL A+LFPGW + + +F L+ +A LEQ + VG++ RYY+VLG +D++GF+T T A+ I A K ++ M+ V WR+SLT LH YF +Y L+VL +DNPDQR++ DV + + + LI+ PFT+AYYTY + G GP +F +F++ T++NKVLMSP+V V+QE+ EGDFRF+H+ IR +AE AF+++ RVE ++ D RL L TQ+ L ++L L + TF Y GSI S+++IAIPIFSG+Y SP EL+ +VS+NAFV +YL+ F+QL+ +++TV+ +AG THRIGEL E L + + S D G + T ++ ++SV P S +LI+DL+L + S++I+G + GK+SLLRV+ GLW GS+ F P V FLPQ PFFTDG+LREQ++YPL+ I + I R L GL DL+AR GG LD W+W D LSPGEMQRL+F RLF+ QPK A LDEATSAL+ ++E LY+ CL + L+SVGHR SL+++H IL + +G W L Sbjct: 21 LDGLFLRRFLRLQAVLFPGWPSPSALMFLTLLCVALLEQLVIYQVGVIPSRYYEVLGNKDFSGFKTLTAVALTLIVANSTLKSFDQFICNMMYVSWRKSLTEYLHSCYFQGQVYYSLHVLREDIDNPDQRISQDVERFCRQLSSMASKLIISPFTLAYYTYQCFHSTGWLGPVSIFGYFIIGTIVNKVLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGRVEHMRTDRRLQSLLQTQRELIGKELWLYIGINTFDYLGSILSYVIIAIPIFSGVYGDLSPTELSALVSKNAFVSIYLISCFSQLIDLSSTVTDVAGYTHRIGELQETLLSLGRKKNNSYSEAKASWDLDCSHSGEDPVPRDTAFLLERMTLSV--PSSGKLLIKDLSLRISQGNSVMIVGNTGTGKTSLLRVLGGLWESTQGSIKMLTCFGPRGVVFLPQRPFFTDGSLREQVIYPLKEIYPVSGSADDERIVRFLELAGLTDLLARAGG-LDEHVDWNWYDILSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVEHELYRVCLQLGMTLISVGHRASLEKFHSWILKLH-GEGRWEL 605
BLAST of abc subfamily abcd vs. nr
Match: gi|1315505048|gb|PKU40184.1| (hypothetical protein llap_9520 [Limosa lapponica baueri]) HSP 1 Score: 495.738 bits (1275), Expect = 9.679e-166 Identity = 265/589 (44.99%), Postives = 370/589 (62.82%), Query Frame = 0 Query: 9 FNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVS--NHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTL 595 +GL+LRRF RL A+LFPGW + +F L+ +A LEQ + VG++ +YY+VLG +D+AGF+T T A+ I K ++ M+ V WR+SLT LH YF +Y L+VL +DNPDQR++ DV + + + +I+ PFT+AYYTY + G GP +F +F++ T++NKVLMSP+V V+QE+ EGDFRF+H+ IR +AE AF+++ RVE ++ D RL RL TQ+ L ++L L + TF Y GSI S++VIAIPIFSG+Y SP EL+ +VS+NAFV +YL+ F+QL+ +++TV+ +AG THRIGEL E L + + S D R K T + ++ V++ P S +LI+DL+L + S++IMG + GK+SLLRV+ GLW GS F P V FLPQ PFFTDG+LREQ++YPL+ I + I R L GL DL+AR GG LD W+W D LSPGEMQRL+F RLF+ QPK A LDEATSAL+ ++E +Y+ CL + L+SVGHR SL+++H IL + +G W L Sbjct: 7 LDGLFLRRFLRLQAVLFPGWPSPGVLMFLTLLCVALLEQLVIYQVGVIPSQYYEVLGNKDFAGFKTLTAVALTLIVVNSTLKSFDQFICNMMYVSWRKSLTEYLHTCYFQGQVYYSLHVLREDIDNPDQRISQDVERFCRQLSSMASKIIISPFTLAYYTYQCFHSTGWLGPVSIFGYFIIGTIVNKVLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGRVEHMRTDRRLQRLLQTQRELIGKELWLYIGINTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSALVSKNAFVSIYLIGCFSQLIDLSSTVTDVAGYTHRIGELQETLLSLGRKKNDNYSEAKASWDLDGSRSREDPVPKDTAFL--LERVTLSVPSSGKLLIKDLSLRISQGNSVMIMGNTGTGKTSLLRVLGGLWESTRGSTKMLTCFGPRGVVFLPQKPFFTDGSLREQVIYPLKEIYPVSGSADDERIVRFLELAGLTDLLARAGG-LDEQVDWNWYDILSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVEHEMYRVCLQLGMTLISVGHRASLEKFHSWILKLH-GEGRWEL 591
BLAST of abc subfamily abcd vs. nr
Match: gi|677198329|gb|KFP46920.1| (ATP-binding cassette sub-family D member 4, partial [Cathartes aura]) HSP 1 Score: 494.197 bits (1271), Expect = 1.107e-165 Identity = 264/587 (44.97%), Postives = 373/587 (63.54%), Query Frame = 0 Query: 13 YLRRFYRLHAILFPGWTAYPSAVFYL-LVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPG-DQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVS--NHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTL 595 +LRRF RL A+LFPGW + PSA+ +L L+ +A LEQ + VG++ +YY+VLG +D++GF+T T A+ I K ++ M+ V WR+SLT LH YF +Y L+VL +DNPDQR++ DV + + + LI+ PFT+AYYTY + G GP +F +F++ T++NKVLMSP+V V+QE+ EGDFRF+H+ IR +AE AF+++ RVE ++ D RL L TQ+ L ++L L + TF Y GSI S++VIA+PIFSG+Y SP EL+ +VS+NAFV +YL+ F+QL+ +++TV+ +AG THRIGEL E L + G K + + S ++ G D ++ V++ P S +LI+DL+L + S++I+G + GK+SLLRV+ GLW GS+ F P V FLPQ PFFTDG+LREQ++YPL+ I + I R L GL DL+AR GG LD W+W D LSPGEMQRL+F RLF+ QPK A LDEATSAL+ ++E LY+ CL + L+SVGHR SL+++H IL + +G W L Sbjct: 1 FLRRFLRLQAVLFPGWPS-PSALMFLTLLCVALLEQLVIYQVGVIPSQYYEVLGNKDFSGFKTLTATALTLIVVNSTLKSFNQFICNMMYVSWRKSLTEYLHSCYFQGQVYYSLHVLREDIDNPDQRISQDVERFCRQLSSMASKLIISPFTLAYYTYQCFHSTGWLGPVSIFGYFIIGTIVNKVLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGRVEHMRTDRRLQSLLQTQRELIGKELWLYIGINTFGYMGSILSYVVIAVPIFSGVYSDLSPTELSALVSKNAFVSIYLIGCFSQLIDLSSTVTDVAGYTHRIGELQETLLSL----GRKKKTYSEAKASWDLDSSHSGEDPVPLDTAFLLERVTLSVPSSGKLLIKDLSLRISQGNSVMIVGNTGTGKTSLLRVLGGLWESTQGSIKMLTCFGPRGVVFLPQRPFFTDGSLREQVIYPLKEIYPVSGSADDERIVRFLELAGLTDLLARAGG-LDEQVDWNWYDILSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVEHELYRVCLQLGMTLISVGHRASLEKFHSWILKLH-GEGRWEL 580
BLAST of abc subfamily abcd vs. nr
Match: gi|224051485|ref|XP_002199934.1| (PREDICTED: ATP-binding cassette sub-family D member 4 [Taeniopygia guttata]) HSP 1 Score: 496.508 bits (1277), Expect = 1.381e-165 Identity = 260/589 (44.14%), Postives = 372/589 (63.16%), Query Frame = 0 Query: 9 FNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVS--NHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTL 595 +GL+LRRF R+ A+LFPGW + + +F L+G+A LEQ + VG++ +YY+VLG++D++GF+T T +V I K ++ M+ V WR+SLT LH YF +Y L VL +DNPDQR++ DV + +++ L++ PFT+AYYTY + G GP +F +F++ T++NKVLMSP+V V+QE+ EGDFRF+H+ IR +AE AF+++ RVE ++ + RL L TQ+ L ++L L + TF Y GSI S++VIAIPIFSG+Y SP EL+ +VS+NAFV +YL+ F+QL+ +++TV+ +AG THRIGEL E L + + S D G D + ++ V++ P S+ +LI+DL+L + S++I+G + GK+S LRV+ GLW GS+ F P V FLPQ PFFTDG+LREQ++YPL+ I + I R L GL DL+AR GG LD W+W D LSPGEMQRL+F RLF+ QPK A LDEATSAL+ ++E LY+ CL + L+SVGHR SL+++H IL + +G W L Sbjct: 61 LDGLFLRRFLRILAVLFPGWPSPSALMFLTLLGVALLEQLVIYQVGVIPSQYYEVLGKKDFSGFKTLTAVSVTLIIVNSTLKSFDQFICNMMYVNWRKSLTEYLHSCYFQGQVYYNLLVLREDIDNPDQRISQDVERFCRQLSSMVSKLVISPFTLAYYTYQCFHSTGWLGPVSIFGYFVIGTMINKVLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGRVEHMRTNRRLQSLLKTQRELIGKELWLSIGINTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSSLVSKNAFVSIYLIGCFSQLIDLSSTVTDVAGYTHRIGELQETLLSLGRKKNGNYSEAKTSWDLDGSHSGE--DPVPSDTAFLLERVTLSVPSSDKLLIKDLSLRISQGNSVMIVGNTGTGKTSFLRVLGGLWESTRGSIRMLTCFGPRGVVFLPQRPFFTDGSLREQVIYPLKEIYPLSGSADDERIVRFLELAGLTDLLARTGG-LDEQVDWNWYDILSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVEHELYRMCLQLGMTLISVGHRPSLEKFHSWILKLH-GEGRWEL 645
BLAST of abc subfamily abcd vs. nr
Match: gi|960965372|ref|XP_014797466.1| (PREDICTED: ATP-binding cassette sub-family D member 4 isoform X2 [Calidris pugnax]) HSP 1 Score: 494.967 bits (1273), Expect = 2.752e-165 Identity = 262/591 (44.33%), Postives = 369/591 (62.44%), Query Frame = 0 Query: 9 FNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPN--VIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVS--NHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTL 595 +GL+LRRF RL A+LFPGW + +F L+ +A LEQ + VG++ +YY+VLG +D+AGF+T T A+ I K ++ M+ V WR+SLT LH YF +Y L+VL +DNPDQR++ DV + + + +++ PFT+AYYTY + G GP +F +F++ T++NKVLMSP+V V+QE+ EGDFRF+H+ IR +AE AF+++ RVE ++ D RL RL TQ+ L ++L L + TF Y GSI S++VIAIPIFSG+Y SP EL+ +VS+NAFV +YL+ F+QL+ +++TV+ +AG THRIGEL E L + K N S + + P ++ V++ P S +LI+DLNL + S++I+G + GK+SLLRV+ GLW GS+ F P V FLPQ PFFTDG+LREQ++YPL+ I + I R L GL DL+ R GG LD W+W D LSPGEMQRL+F RLF+ QPK A LDEATSAL+ ++E +Y+ CL + L+SVGHR SL+++H IL + +G W L Sbjct: 21 LDGLFLRRFLRLQAVLFPGWPSSGVLMFLTLLCVALLEQLVIYQVGVIPSQYYEVLGNKDFAGFKTLTAVALTLIVVNSTLKSFDQFICNMMYVSWRKSLTEYLHGCYFQGQVYYSLHVLREDIDNPDQRISQDVERFCRQLSSMASKIVISPFTLAYYTYQCFHSTGWLGPVSIFGYFIIGTIVNKVLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGRVEHMRTDRRLQRLLQTQRELIGKELWLYIGINTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSALVSKNAFVSIYLIGCFSQLIDLSSTVTDVAGYTHRIGELQETLLSL-----GRKKNDNYSEAKASWDLDGHSREDPVPKDTAFLLERVTLSVPSSGKLLIKDLNLRISQGNSVMIVGNTGTGKTSLLRVLGGLWESTRGSIKMLTCFGPRGVVFLPQRPFFTDGSLREQVIYPLKEIYPVSGSVDDERIVRFLELAGLTDLLERAGG-LDEQVDWNWYDILSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVEHEMYRVCLQLGMTLISVGHRASLEKFHNWILKLH-GEGRWEL 604 The following BLAST results are available for this feature:
BLAST of abc subfamily abcd vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of abc subfamily abcd vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of abc subfamily abcd vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold96_size378025:54002..58604- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold96_size378025-snap-gene-0.23 ID=maker-scaffold96_size378025-snap-gene-0.23|Name=abc subfamily abcd|organism=Tigriopus kingsejongensis|type=gene|length=4603bp|location=Sequence derived from alignment at scaffold96_size378025:54002..58604- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'abc subfamily abcd' has the following synonyms
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