abc subfamily abcd, maker-scaffold96_size378025-snap-gene-0.23 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000005996 (supercontig:LSalAtl2s:LSalAtl2s324:163173:165128:-1 gene:EMLSAG00000005996 transcript:EMLSAT00000005996 description:"maker-LSalAtl2s324-augustus-gene-1.35") HSP 1 Score: 430.639 bits (1106), Expect = 1.239e-144 Identity = 242/601 (40.27%), Postives = 361/601 (60.07%), Query Frame = 0 Query: 4 TAHYGFNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIR--AGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAF--HQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPK-SELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARN-IRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDI 598 + YGFN +L RF+ L +++F A+ +++ + +LEQ + +G++ G++ + L D + F A + ++ + M + R+ + +L+V WRRSLT LH +YF FY L LDNPDQR+ +D LV YG+I++++++ PF I+YY Y +Y +GP GP +F FFL T +NK L++PVV VE +EGDFRF+H IR+ +ESLAF + E+ + D L LC Q+ L L+LAT F Y SI S+L++ IP+++G Y G + EL+ ++SE AFV + L+ +F++LV +A VSRLA VTHR+ E +E L+Q K N + S + S V+ + ++S+ P S L+ +LNL L + +LLI G SS GK+SLLRV+ GLW+ ++GS F V F+ Q PFFT+G+LR Q+ YPL+V+ + Q I+ L + GLGDLI R G+LD +P SW + LSPGE QR+A IR FH P++ LDEATSALS+D+E+L Y++ N I L+SVGHR+SLK++H + L I LS+G ++L +I Sbjct: 9 SKSYGFNLQFLHRFWHLQSLIFTDRINIGLAI--IILLICSLEQLVMYKIGMIPGQFIRALVSEDESKFVRAIVLSLIIVCFMTLVLSARILTSELLSVSWRRSLTRCLHSLYFFNTGFYTLK-----LDNPDQRIASDAECLVSIYGQILSEILLSPFVISYYIYDSYRGRGSGPYGPLIIFGFFLFGTFINKTLLTPVVNSGVEVRSKEGDFRFKHAEIRSQSESLAFLGQMGSFAEASRVDHLLEILCEAQRKLVLATYRLNLATNFFDYGASIISYLIVGIPVYNGFYKGLNVEELSGIISETAFVNIMLISKFSRLVDLAGKVSRLASVTHRVAEFVEKLSQEKIKDL--KDFDNHAESSPLLMNDSDDSSVSDETVLTLSNLSIGLPDISRKTLVSNLNLELKIGDNLLITGSSSCGKTSLLRVLRGLWNEKSGSYK--FGRKTVIFISQKPFFTNGSLRRQVTYPLEVVSSVSHDQFDIWIKMKLIKFGLGDLIDRVNGNLDAEPDKSWSEILSPGETQRMAIIRSLFHSPEILILDEATSALSLDMEELCYREVSYNNLITLISVGHRDSLKKFHSKHLQI-LSEGQYSLHEI 597
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000005788 (supercontig:LSalAtl2s:LSalAtl2s3118:3124:4893:1 gene:EMLSAG00000005788 transcript:EMLSAT00000005788 description:"augustus_masked-LSalAtl2s3118-processed-gene-0.0") HSP 1 Score: 417.927 bits (1073), Expect = 7.515e-140 Identity = 233/602 (38.70%), Postives = 353/602 (58.64%), Query Frame = 0 Query: 4 TAHYGFNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVL--DTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSV--SVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDL-DPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCL--ARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDI 598 T +Y N R +LHAI+ V L+G+ LEQ++ GLV+G + +VL +D GF+T + + I + V K R+YV ++L+V WRR+LT LH +YF +Y++NVL + GLDNPDQRMT+DV YGE+IA LI+ PFTI +YT+ AY R+G GP G+F++F++ +N LMSPV + E+ EGDFRF+H+ +R AE +AF SA +ES+K ++ L L +Q S++ ++ LDL F Y G+I S+L+IA+P+F+G YD +L +S+N+FVCM L++ +QLV +A+ + +AGVTHR+ EL+E L K N D D +I+++++ + +P + VLI +LNL + +LI G SS+GK+SLLR+I GLW GS+S F + FL Q P TDG+L + ++YP + + P T + LT L L + DL + W D LSPGEMQR+ FIR+F+H+P++ LDE+T++L ++E +LY+ + I ++SVGHR+SL++YH + L + +G W L+ I Sbjct: 10 TGNYRINWKLFVRIGKLHAII--SRNLINIFVTICLLGVCILEQYVGYKTGLVAGAFXEVLLNKDTEGFKTTAIHSFGVILGIAVVKTVRMYVAKILSVFWRRTLTTNLHNLYFDADSYYKVNVLIKELGLDNPDQRMTSDVDTFCLVYGEMIARLIISPFTIGFYTWDAYTRSGWIGPVGVFIYFILGCFVNLFLMSPVSQRVFFMEKNEGDFRFKHMFLREKAEEIAFSNSAIIESIKTNKLLKSLIKSQLSVYTWEILLDLWINIFDYVGAIISYLIIAVPVFTGFYDSLDQAKLGNQISQNSFVCMTLIYNLSQLVDLASKFANMAGVTHRMIELVEILE---------KHNSNPCFFKDNAICTNDKDPHMFETMINLENIILKIPSPTTPRVLIDNLNLNIKTGDRILITGASSSGKTSLLRLIRGLWPTVEGSIS--FFTDSIEFLSQRPLMTDGSLLQNMIYPSE---XPISPDLTW-FKDQLTRFNLDHLYKQ----YDLFQYQNRWEDILSPGEMQRICFIRVFYHRPQVVLLDESTASLPTNIEAMLYEYLIITCPKITILSVGHRDSLRKYHMKELQLQ-CNGEWELKQI 589
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000002016 (supercontig:LSalAtl2s:LSalAtl2s1361:43077:48755:-1 gene:EMLSAG00000002016 transcript:EMLSAT00000002016 description:"augustus_masked-LSalAtl2s1361-processed-gene-0.2") HSP 1 Score: 51.2174 bits (121), Expect = 9.001e-7 Identity = 55/222 (24.77%), Postives = 91/222 (40.99%), Query Frame = 0 Query: 392 PKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDK--------LSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQ----KCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDIPQD 601 PK E ++Q +NL + + +++G S +GK++L+ + TGSV + P V L Q P+ + T+++ I+ + R E +IA C D+D D LS G+ QRLA R + + F+D S+L + +++ K L + R V + E L HR + L DG + QD Sbjct: 738 PKCETNVLQSINLEIKTGSLTIVIGPSGSGKTALISSLIEEMDRITGSVKWNV-PDTVALLGQRPWLLNTTIKDNIL-----------------LGRPFKEKRYKKVIAACDLQTDIDLLPHGDDTEIGERGVLLSGGQRQRLAIARCLYSKSYCTFMDAPFSSLDSKITSHVFEEGVLKILLKRRRTVFLT-TERLDFLHRADHIVALKDGMIKAQGTIQD 940
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|2828199|sp|P31826.2|YDDA_ECOLI (RecName: Full=Inner membrane ABC transporter ATP-binding protein YddA; AltName: Full=CDS102) HSP 1 Score: 137.502 bits (345), Expect = 2.962e-33 Identity = 119/481 (24.74%), Postives = 206/481 (42.83%), Query Frame = 0 Query: 87 VVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVL--DTGLDNPDQRMTADVAALVQ-----TYGEIIADLIVVPFTIAYY----TYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVV-----RLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYD--GYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALS 549 V+ + ++ ++LT+ WR LT +FA +Y + DNPDQR+ D+ L+ ++G I + +++ FT+ + T S + G V+ +V ++ L + V L VE++R E FR V AE +A + ++ + + + L +RQ LD +S S+ + ++ SG + G A ++ N + ++++ +L ++AA + RL + +L E P K+ + + + S+ P ++++L ++LN + LL+ G S AGK++LL+ ++ W G +S SP D +++ Q+P G L+E I L + P + + +L +VGLG L AR D D W D LS GE QR+A RL +PK FLDE TS L Sbjct: 86 VLISVNKTWLIKLLTIRWREWLTDYYLNRWFADKNYYFTQIYGEHKNTDNPDQRIAEDILLLISKTLSLSFGFIQSLSMLITFTVILWESAGTLSFTVGGTEWNIQGYMVYTVVLIVIGGTLFTHKVGKRIRPLNVEKQRSEATFRTNLVQHNKQAELIALSNAESLQRQELSDNFHTIKENWHRLMNRQRWLDYWQNIYSRSLSVLPYFLLLPQFISGQINLGGLMKSRQAFMLVSNNL--SWFIYKYDELAELAAVIDRL----YEFHQLTEQ--------------------------RPTNKPKNCQHAVQVADASIRTPDNKIIL-ENLNFHVSPGKWLLLKGYSGAGKTTLLKTLSHCWPWFKGDIS---SPADSWYVSQTPLIKTGLLKEIICKALPL------PVDDKSLSEVLHQVGLGKLAARIH---DHD---RWGDILSSGEKQRIALARLILRRPKWIFLDETTSHLE 518
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|465683|sp|P34230.1|PXA2_YEAST (RecName: Full=Peroxisomal long-chain fatty acid import protein 1; AltName: Full=Peroxisomal ABC transporter 2) HSP 1 Score: 120.939 bits (302), Expect = 2.759e-27 Identity = 143/615 (23.25%), Postives = 248/615 (40.33%), Query Frame = 0 Query: 42 LAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAM----------VVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQ-TFSYFGSIASFLVIAIPIF------SGLYDGYSPG-ELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPL-----------DVFFLPQSPFFTD-GTLREQIVYPLQVIVAEVRPQE-----TADIERLLTEVGLGDLIARCGGSLDLDPKWS-----------------------------WPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGH 592 L + L+L V + G+ L +A F T L W I + TK C V + R ++ + S ++ H +++ ++ + L + + + L+ + + DLI+ F + T + + G+ V+ S L K++ RLT+ E FR H ++ + E +A + + E D RL + D+AT Y A ++ +IPIF PG ++ N + + + V++ + +L G+ R+ + + L GD + DE + D + I +++ ++ P ++ VL+ +L+ L LLI+G + GKSSL R++ GLW + NH S L +F+LPQ P+ + T REQI+YP + + R AD+ ++L + L DL+ SL L + S W ++L+ G QRLA R+++H+PK A LDE TSA++ ++E +Y+ I L+SV HR SL +H +L G+ Sbjct: 133 LLNIRTLLSLRVATLDGQLVSTLVRAQYANF-TKILLGKWMILGIPASFINSLISYTTKLCAVTINRKVS-DFLLSKYLSNHHTFYSVASAESVSEIQDNLTKDIYTFSMNSSLLLNQLLKPMLDLILCSFKL--LTSNTSVMGEGTLALGLIVY--ASNSLLKLIQPNFTRLTMASASLESWFRSLHSNLHSSNEEIALLRGQKRELENVDYSFYRLVLFLNREIKARAIYDVATAFVIKYTWGAAGLVLCSIPIFFKNKPSEDTLQLKEPGNDMTADFITNRRLLVTASSSIGRFVELKRNIQQLRGIRLRLNKFNDLLDANKGD--------DEKEPRDERCIVEYDDSR-----IKFENIPLITPANQ-VLVPELSFDLKHGNHLLIIGPNGCGKSSLFRILGGLWPIRATPNKNHQSKLIMPRRTVDRDCAIFYLPQRPYMGNRSTFREQIIYPDSIEQFKERYHNDYDLGDADLIKILQLLDLEDLVTE-NMSLLLAQRTSKNDSQQLSTEDNQSPCAIKVRDAFSIVRNWSEELTIGVQQRLAMARMYYHKPKFAVLDECTSAVAPEMEQRMYENAQNFGISLISVCHRTSLWHFHNYLLKFDGKGGY 726
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|122064245|sp|Q4L8L7.1|HRTA_STAHJ (RecName: Full=Putative hemin import ATP-binding protein HrtA) HSP 1 Score: 75.0998 bits (183), Expect = 4.506e-14 Identity = 66/223 (29.60%), Postives = 112/223 (50.22%), Query Frame = 0 Query: 398 LIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSV----SNHFSPL---------DVFFLPQS----PFFTDGTLREQIVYPLQVIVAE---VRPQETAD-IERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLA----RNIRLVSVGHRESLKRYHRQILAIGLSDGHWTL 595 +++++N +++ +++ G S +GKS+LL ++ GL SP +G V N FS D+ F+ QS P+ T +REQ++ IVA+ ++ +E D +RLL E+GL LD+ +P LS GE QR+A +R F ++PK+ DE T++L D + Q A +N+ + + H + L Y +++ I DG L Sbjct: 21 VLKNINFSVNQGEFIILSGASGSGKSTLLNILGGLLSPSSGDVLYKGENLFSKEVDKTSLRLNDIGFIFQSSHLVPYLT---VREQLM-----IVAKEAGIKRKEAKDKAQRLLNEIGLSH-------RLDV-----YPHLLSGGEKQRVAIMRAFMNEPKIILADEPTASLDADRATSVVQMIKAHVQTKNMIGIMITHDKRLFEYADRVIEI--QDGKIEL 221
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|123738841|sp|Q2LVM2.1|LOLD_SYNAS (RecName: Full=Lipoprotein-releasing system ATP-binding protein LolD) HSP 1 Score: 70.8626 bits (172), Expect = 1.361e-12 Identity = 64/220 (29.09%), Postives = 100/220 (45.45%), Query Frame = 0 Query: 394 SELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPF--FTDGTLR---------------EQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMD----LEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGH 592 + + +++ L+L ++ TSL I+G S AGK++ + ++ L P +G V F+ LDVF P+ F + T+ E + P +I R E LL +VGLGD + P +LS GE QR+A R +P++ DE T L + +ED+L + + I L+ V H +SL R +IGL DG Sbjct: 16 NRIEVLRGLDLKIEDGTSLAILGVSGAGKTTFVHILGTLDHPTSGEVL--FNGLDVFNWPEKKLASFRNRTIGFVFQFHNLLPEFSSLENTMMP-ALISGMPRRNALERAETLLHDVGLGDRMTH------------KPSELSGGEQQRVAVARALVMEPEILLADEPTGNLDTETGRKIEDILLELNRQKGITLIVVTHNQSL--AGRMSRSIGLRDGE 218
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|81847662|sp|Q8NR42.1|SSUB_CORGL (RecName: Full=Aliphatic sulfonates import ATP-binding protein SsuB) HSP 1 Score: 68.9366 bits (167), Expect = 8.317e-12 Identity = 65/214 (30.37%), Postives = 102/214 (47.66%), Query Frame = 0 Query: 398 LIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPL-QVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALS----MDLEDLLYQKCLARNIRLVSVGH--RESLKRYHRQILAIGLSDG---HWTLEDIPQD 601 ++Q ++LT++ ++GRS +GKS++LRV+AGL +GSV +P F P+ T+ + + + L + ++ QE A LL EV L D A +WP LS G+ QR++ R +P+L LDE AL + +DLL + RN+ ++ V H E++ +L L DG H DIP D Sbjct: 25 VLQGIDLTINCGEVTALIGRSGSGKSTILRVLAGLSKEHSGSVEISGNPAVAFQEPR--LLPWKTVLDNVTFGLNRTDISWSEAQERASA--LLAEVKLPDSDA------------AWPLTLSGGQAQRVSLARALISEPELLLLDEPFGALDALTRLTAQDLLLKTVNTRNLGVLLVTHDVSEAIALADHVLL---LDDGAITHSLTVDIPGD 219
BLAST of abc subfamily abcd vs. nr
Match: gi|586962540|gb|AHK05658.1| (ATP-binding cassette transporter sub-family D member 4 isoform X2 [Tigriopus japonicus]) HSP 1 Score: 875.544 bits (2261), Expect = 0.000e+0 Identity = 427/608 (70.23%), Postives = 502/608 (82.57%), Query Frame = 0 Query: 1 MSDTAHYGFNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLD-TGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGD-GGAGKAIPNRSALSDEMR---VGPPGDQKSTPNVIH---IQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDIPQ 600 M+D HYGFN LYLRRFYRLH +LFPGW + +A+ LLV L+ LEQWLALYVGL+SG YYKVLG++DW+GF+T TLDA KI AMV+TK RVYVT ++TVGWRRSLTMALH+MYFARI++YRLNVLD +GLDNPDQR+TADV+ L Q+YG IIADLIVVPFTI+YYTYSAY RAGPAGP+GMF+FFL ST++NK+LMSPVVRLTVEQERREGDFRF+HV++RTHAESLAFH+SARVES+K+DE+LL LC TQQSLF+RQLALDLAT FSY GSIASFLVIAIPIFSG+YD SP +LAQ VSENAFVCMYLVFQFT+LVQMA+TVSRLAGVTHRI E+ E L M G+ N S D+ + V P +P H +++V ++ PKS LI++LNL LDL ++LLI+G+SSAGKSSLLRVIAGLW G + + S LDVFFLPQ PFFTDGTLREQIVYPLQV+ +++ PQE+ D+ +L EVGLGDL RCGGSLD DPKWSW DKLSPGEMQRLAFIRLF+H PK+AFLDE+TSALS+DLEDLLY+KCL +NI LVSVGHRE+L++YH Q+L IGLSDG WTL I + Sbjct: 1 MADN-HYGFNTLYLRRFYRLHGLLFPGWRSLNAALMVLLVILSGLEQWLALYVGLISGGYYKVLGDQDWSGFKTTTLDATLKIMAMVITKSVRVYVTNVMTVGWRRSLTMALHQMYFARIRYYRLNVLDESGLDNPDQRITADVSLLCQSYGSIIADLIVVPFTISYYTYSAYTRAGPAGPTGMFLFFLASTIINKLLMSPVVRLTVEQERREGDFRFKHVTVRTHAESLAFHKSARVESIKSDEKLLSLCQTQQSLFNRQLALDLATNVFSYMGSIASFLVIAIPIFSGVYDNLSPSQLAQAVSENAFVCMYLVFQFTKLVQMASTVSRLAGVTHRIAEMTEVLINMNRSFHCQGRKSSNNSEDEDQDKLVAVVPDPKPSESPLKNHSLILENVDLITPKSRKKLIRNLNLALDLGSNLLIVGQSSAGKSSLLRVIAGLWPLDRGVIQRNLSDLDVFFLPQQPFFTDGTLREQIVYPLQVLTSQIDPQESVDLLNILEEVGLGDLPKRCGGSLDTDPKWSWYDKLSPGEMQRLAFIRLFYHCPKMAFLDESTSALSLDLEDLLYKKCLEKNIALVSVGHRETLRQYHDQLLTIGLSDGQWTLTPISR 607
BLAST of abc subfamily abcd vs. nr
Match: gi|586962538|gb|AHK05657.1| (ATP-binding cassette transporter sub-family D member 4 isoform X1 [Tigriopus japonicus]) HSP 1 Score: 552.362 bits (1422), Expect = 0.000e+0 Identity = 279/609 (45.81%), Postives = 392/609 (64.37%), Query Frame = 0 Query: 2 SDTAHYGFNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTG-LDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGH-----------WTLEDI 598 S +YGFN +L R +LH LFP WT+ P +F ++ + LE+++ YVGL+S YY+VLG++D+ F TL ++ I + K R++ M+ V WR ++T L++ YF FY +N+L G L N DQR+TADV++ TYG IIAD++V P TI YYTY AY RAG GP GMF+FF++ST++NK+LMSPVV + EQ+++EG+FRFQHVS R H+ESLAF + V K L RLC +Q+ +F+ Q L+LAT F Y SIASFLVIA+P+FSG YD + EL+ ++SENAFVC+ L++QF++LV ++ VS + G HRI ELIE + D A NR D + + P D K + +V V +P + LI+DL+L ++L +LL+MG SS GKSSLLRVI GLW G++ + L +LPQ P+ G+L+E +++P+ + + ++ I+ L+TE GL ++ RCGG+LD DP+W+W D +SPGE+QRLAFIRLF+H+P LAFLDE+TSALS+ +E+ LY+KC I VSVGHRE+LK+YH +IL I H WTL D+ Sbjct: 7 SVVKYYGFNWQFLVRVTKLHKFLFPSWTSIPVFLFVFILLVRCLEEYVGYYVGLISSDYYQVLGDKDFDAFVQVTLKSLGMIVLIAFIKTTRIWFQEMIVVSWRLAMTTTLNQKYFQHHSFYHINILGRGFLGNADQRITADVSSFCSTYGFIIADILVSPLTIGYYTYDAYTRAGWIGPLGMFLFFVISTVINKLLMSPVVNASAEQDKQEGEFRFQHVSTRIHSESLAFQDGSEVNLEKIQGSLRRLCRSQRRVFNLQFFLNLATNLFQYVSSIASFLVIAVPLFSGAYDDLTGSELSSLISENAFVCINLIYQFSKLVNISPYVSEMGGAAHRIAELIETFQSLEMD----HANKNR----DGIGMSPYLDPKVA---FRLTNVDVRSPGMDRPLIKDLSLDIELGQNLLVMGPSSCGKSSLLRVIKGLWPISNGAIEVN-PDLKAIYLPQRPYMMSGSLKELVLHPIDTLQCSLTIEDEQRIKDLVTEFGLDHILERCGGNLDYDPQWNWSDVMSPGELQRLAFIRLFYHKPALAFLDESTSALSLSVEEKLYEKCSKMGITCVSVGHRETLKKYHTKILEIKEESDHNASTHVNTNALWTLRDL 603
BLAST of abc subfamily abcd vs. nr
Match: gi|1022773295|gb|KZS17405.1| (ABC protein, subfamily ABCD [Daphnia magna]) HSP 1 Score: 529.25 bits (1362), Expect = 5.530e-179 Identity = 282/604 (46.69%), Postives = 393/604 (65.07%), Query Frame = 0 Query: 3 DTAHYGFNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQM--------PGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFS--PLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLE 596 D +GFN + RRF+RL +LFPG + P +F LL+ +A L++++ VGL+ +Y+VLGE+D GF TL +V I A+ V K + Y++++L + WR+ LT A+HR+YF I +Y+LNVLD +DNPDQR+TAD+ L + + ++V PFTIAYY+Y AY+ G GP+ F+FF+V T +NK+LMSP+V V ERREGDFR++H+ IR++AESLAF AR+E K + +L L TQ SL+ RQ L+LA F Y GSI S+L +A+PIFSG YDG S EL+ ++S+NAFVC+YL+ F+ LV ++++V++LAGVTHR+ ELIE L Q+ PGD S VG D K + ++ V+ AP L+++L L L SLLI G SSAGK+SLLR++ GLW G+++ H + P V FLPQ P+ TDGTLREQI +PL V + + ET ++ L ++ L L+ R GG LD +W+W D LSPGEMQRL+FIRL +H+P +AFLDEATSAL M++E LLY + + I L+SVGHRESL+ +H+ +L + DG WTLE Sbjct: 9 DGKDHGFNVNFFRRFWRLQHLLFPGVFSLPLGLFSLLLLVALLDEFIIYGVGLIPSGFYQVLGEKDLPGFINQTLRSVGIILAVAVNKAIKTYISQVLNLTWRQLLTRAVHRLYFTDINYYQLNVLDKFVDNPDQRITADINILCLVFSSVAIKVVVSPFTIAYYSYKAYVGTGWVGPTSCFLFFIVGTFVNKLLMSPIVAWVVRNERREGDFRYKHMQIRSNAESLAFLTGARLEESKTNNKLDLLLTTQHSLYGRQFFLNLAVNMFDYLGSIISYLALAVPIFSGRYDGLSSAELSALISQNAFVCIYLISTFSTLVDLSSSVTQLAGVTHRVSELIERLQQLYDRSDAETPGDLKVVSVCKKNS-------VGTMDDMKQEGYL--MEGVAFKAPGRSEDLVKELYLHLRPGESLLITGSSSAGKTSLLRLLRGLWKLNRGTLTAHCTPGPCGVLFLPQKPYLTDGTLREQITFPLSVDLDLIPNDETEELLSYLHKMKLDGLMTRIGG-LDRPAEWNWYDVLSPGEMQRLSFIRLLYHKPAMAFLDEATSALDMEMEQLLYSAAVDKGITLISVGHRESLRAFHKNLLHLK-GDGSWTLE 601
BLAST of abc subfamily abcd vs. nr
Match: gi|321453858|gb|EFX65057.1| (ABC protein, subfamily ABCD [Daphnia pulex]) HSP 1 Score: 516.538 bits (1329), Expect = 3.295e-174 Identity = 277/600 (46.17%), Postives = 395/600 (65.83%), Query Frame = 0 Query: 3 DTAHYGFNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFS--PLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDIPQ 600 D +GFN + RRF+RL +LFPG + P +F LL+ +A L++++ VGL+ +Y+VLGE+D+ GF TL +V I A+ V K + Y++++L + WR+ LT A+HR+YF I +Y+LNVLD +DNPDQR+TAD+ L + + ++V PFTI+YY+Y AY+ G GP+ F+FF+V T++NK+LMSP+V V+ ERREGDFR++H+ IR++AESLAF AR+E K + +L L TQ SL+ RQ L+LA F Y GSI S+L +A+PIFSG YD SP EL+ ++S+NAFVC+YL+ F+ LV ++++V++LAGVTHR+ ELIE + N + + DE+ G ++ V+ AP L++DL L L SLLI G SSAGK+SLLR++ GLW G+++ H++ P V FLPQ P+ TDGTLREQI +PL V + + ET ++ L ++ L L++R GG LD +W+W D LSPGEMQRL+FIRL +H+P +AFLDEATSAL M++E LLY + + I LVSVGHR SL+ +H+++L + DG WTLE I Sbjct: 9 DARDHGFNVSFFRRFWRLQHLLFPGIFSLPLGLFALLLLVALLDEFIIYGVGLIPSGFYQVLGEKDFPGFINQTLKSVGIILAVAVNKAVKTYISQILNLTWRQLLTRAVHRLYFTGINYYQLNVLDKFVDNPDQRITADINILCLVFSSVAIKVVVSPFTISYYSYKAYVGTGWVGPTSCFLFFIVGTVVNKLLMSPIVAWVVKNERREGDFRYKHMQIRSNAESLAFLTGARLEESKTNNKLDVLLKTQHSLYGRQFFLNLAVNMFDYLGSIISYLALAVPIFSGRYDDISPAELSSLISQNAFVCIYLISTFSTLVDLSSSVTQLAGVTHRVSELIEL---------SISTTKNTTGMFDEVNTEDDG--------YFMEGVAFKAPGRTDELVKDLCLHLKPGESLLITGSSSAGKTSLLRLLRGLWRLSRGNLTAHYTPGPCGVLFLPQKPYLTDGTLREQITFPLSVDLELITNDETEELLNYLQKMKLDGLMSRIGG-LDRPVEWNWYDVLSPGEMQRLSFIRLLYHRPAMAFLDEATSALDMEMEQLLYSAAVDKGITLVSVGHRASLRAFHKKVLHLK-GDGSWTLESISN 589
BLAST of abc subfamily abcd vs. nr
Match: gi|677547160|gb|KFR08121.1| (ATP-binding cassette sub-family D member 4, partial [Nipponia nippon]) HSP 1 Score: 497.278 bits (1279), Expect = 8.023e-167 Identity = 262/587 (44.63%), Postives = 371/587 (63.20%), Query Frame = 0 Query: 11 GLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVS--NHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTL 595 GL+LRRF RL A+LFPGW + + +F L+ +A LEQ + VG++ +YY+VLG +D++GF+T T A+ I K ++ M+ V WR+SLT LH YF +Y L+VL +DNPDQR++ DV + + + LI+ PFT+AYYTY + G GP G+F +F++ T++NKVLMSP+V V+QE+ EGDFRF+H+ IR +AE AF+++ RVE ++ + RL L TQ+ L ++L L + TF Y GSI S++VIAIPIFSG+Y SP EL+ +VS+NAFV +YL+ F+QL+ +++T++ +AG THRIGEL E L + + S D G + T + ++ V++ P S +LI+DL+L + S++I+G + GK+SLLRV+ GLW GS+ F P V FLPQ PFFTDG+LREQ++YPL+ I + I R L GL DL+AR GG LD W+W D LSPGEMQRL+F RLF+ QPK A LDEATSAL+ ++E LY+ CL + L+SVGHR SL+++H IL + +G W L Sbjct: 4 GLFLRRFLRLQAVLFPGWPSPGALMFLTLLCVALLEQLVIYQVGVIPSQYYEVLGNKDFSGFQTLTAVALTLIVVNSTLKSFDQFICNMMYVSWRKSLTEYLHSCYFQGQVYYSLHVLREDIDNPDQRISQDVERFCRQLSSMASKLIISPFTLAYYTYQCFHSTGWLGPVGIFGYFIIGTIVNKVLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGRVEHMRTNRRLQSLLQTQRELIGKELWLYIGINTFDYLGSILSYVVIAIPIFSGVYSDLSPTELSALVSKNAFVSIYLISCFSQLIDLSSTMTDIAGYTHRIGELQETLLSLGRKKNGNYSEAKASWDLDGSHTGEDSVPRDTAFL--MERVTLSVPSSGKLLIKDLSLRISQGNSVMIVGNTGTGKTSLLRVLGGLWESTQGSIKMLTCFGPRGVVFLPQRPFFTDGSLREQVIYPLKDIYPVSGSADDERIVRFLEVAGLTDLLARAGG-LDEQVDWNWYDILSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVEQELYRVCLQLGMTLISVGHRASLEKFHSWILKLH-GEGRWEL 586
BLAST of abc subfamily abcd vs. nr
Match: gi|768348572|ref|XP_011571114.1| (PREDICTED: ATP-binding cassette sub-family D member 4 isoform X1 [Aquila chrysaetos canadensis]) HSP 1 Score: 497.664 bits (1280), Expect = 1.766e-166 Identity = 265/589 (44.99%), Postives = 372/589 (63.16%), Query Frame = 0 Query: 9 FNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVS--NHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTL 595 +GL+LRRF RL A+LFPGW + + +F L+ +A LEQ + VG++ RYY+VLG +D++GF+T T A+ I A K ++ M+ V WR+SLT LH YF +Y L+VL +DNPDQR++ DV + + + LI+ PFT+AYYTY + G GP +F +F++ T++NKVLMSP+V V+QE+ EGDFRF+H+ IR +AE AF+++ RVE ++ D RL L TQ+ L ++L L + TF Y GSI S+++IAIPIFSG+Y SP EL+ +VS+NAFV +YL+ F+QL+ +++TV+ +AG THRIGEL E L + + S D G + T ++ ++SV P S +LI+DL+L + S++I+G + GK+SLLRV+ GLW GS+ F P V FLPQ PFFTDG+LREQ++YPL+ I + I R L GL DL+AR GG LD W+W D LSPGEMQRL+F RLF+ QPK A LDEATSAL+ ++E LY+ CL + L+SVGHR SL+++H IL + +G W L Sbjct: 21 LDGLFLRRFLRLQAVLFPGWPSPSALMFLTLLCVALLEQLVIYQVGVIPSRYYEVLGNKDFSGFKTLTAVALTLIVANSTLKSFDQFICNMMYVSWRKSLTEYLHSCYFQGQVYYSLHVLREDIDNPDQRISQDVERFCRQLSSMASKLIISPFTLAYYTYQCFHSTGWLGPVSIFGYFIIGTIVNKVLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGRVEHMRTDRRLQSLLQTQRELIGKELWLYIGINTFDYLGSILSYVIIAIPIFSGVYGDLSPTELSALVSKNAFVSIYLISCFSQLIDLSSTVTDVAGYTHRIGELQETLLSLGRKKNNSYSEAKASWDLDCSHSGEDPVPRDTAFLLERMTLSV--PSSGKLLIKDLSLRISQGNSVMIVGNTGTGKTSLLRVLGGLWESTQGSIKMLTCFGPRGVVFLPQRPFFTDGSLREQVIYPLKEIYPVSGSADDERIVRFLELAGLTDLLARAGG-LDEHVDWNWYDILSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVEHELYRVCLQLGMTLISVGHRASLEKFHSWILKLH-GEGRWEL 605
BLAST of abc subfamily abcd vs. nr
Match: gi|1315505048|gb|PKU40184.1| (hypothetical protein llap_9520 [Limosa lapponica baueri]) HSP 1 Score: 495.738 bits (1275), Expect = 9.679e-166 Identity = 265/589 (44.99%), Postives = 370/589 (62.82%), Query Frame = 0 Query: 9 FNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVS--NHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTL 595 +GL+LRRF RL A+LFPGW + +F L+ +A LEQ + VG++ +YY+VLG +D+AGF+T T A+ I K ++ M+ V WR+SLT LH YF +Y L+VL +DNPDQR++ DV + + + +I+ PFT+AYYTY + G GP +F +F++ T++NKVLMSP+V V+QE+ EGDFRF+H+ IR +AE AF+++ RVE ++ D RL RL TQ+ L ++L L + TF Y GSI S++VIAIPIFSG+Y SP EL+ +VS+NAFV +YL+ F+QL+ +++TV+ +AG THRIGEL E L + + S D R K T + ++ V++ P S +LI+DL+L + S++IMG + GK+SLLRV+ GLW GS F P V FLPQ PFFTDG+LREQ++YPL+ I + I R L GL DL+AR GG LD W+W D LSPGEMQRL+F RLF+ QPK A LDEATSAL+ ++E +Y+ CL + L+SVGHR SL+++H IL + +G W L Sbjct: 7 LDGLFLRRFLRLQAVLFPGWPSPGVLMFLTLLCVALLEQLVIYQVGVIPSQYYEVLGNKDFAGFKTLTAVALTLIVVNSTLKSFDQFICNMMYVSWRKSLTEYLHTCYFQGQVYYSLHVLREDIDNPDQRISQDVERFCRQLSSMASKIIISPFTLAYYTYQCFHSTGWLGPVSIFGYFIIGTIVNKVLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGRVEHMRTDRRLQRLLQTQRELIGKELWLYIGINTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSALVSKNAFVSIYLIGCFSQLIDLSSTVTDVAGYTHRIGELQETLLSLGRKKNDNYSEAKASWDLDGSRSREDPVPKDTAFL--LERVTLSVPSSGKLLIKDLSLRISQGNSVMIMGNTGTGKTSLLRVLGGLWESTRGSTKMLTCFGPRGVVFLPQKPFFTDGSLREQVIYPLKEIYPVSGSADDERIVRFLELAGLTDLLARAGG-LDEQVDWNWYDILSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVEHEMYRVCLQLGMTLISVGHRASLEKFHSWILKLH-GEGRWEL 591
BLAST of abc subfamily abcd vs. nr
Match: gi|677198329|gb|KFP46920.1| (ATP-binding cassette sub-family D member 4, partial [Cathartes aura]) HSP 1 Score: 494.197 bits (1271), Expect = 1.107e-165 Identity = 264/587 (44.97%), Postives = 373/587 (63.54%), Query Frame = 0 Query: 13 YLRRFYRLHAILFPGWTAYPSAVFYL-LVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPG-DQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVS--NHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTL 595 +LRRF RL A+LFPGW + PSA+ +L L+ +A LEQ + VG++ +YY+VLG +D++GF+T T A+ I K ++ M+ V WR+SLT LH YF +Y L+VL +DNPDQR++ DV + + + LI+ PFT+AYYTY + G GP +F +F++ T++NKVLMSP+V V+QE+ EGDFRF+H+ IR +AE AF+++ RVE ++ D RL L TQ+ L ++L L + TF Y GSI S++VIA+PIFSG+Y SP EL+ +VS+NAFV +YL+ F+QL+ +++TV+ +AG THRIGEL E L + G K + + S ++ G D ++ V++ P S +LI+DL+L + S++I+G + GK+SLLRV+ GLW GS+ F P V FLPQ PFFTDG+LREQ++YPL+ I + I R L GL DL+AR GG LD W+W D LSPGEMQRL+F RLF+ QPK A LDEATSAL+ ++E LY+ CL + L+SVGHR SL+++H IL + +G W L Sbjct: 1 FLRRFLRLQAVLFPGWPS-PSALMFLTLLCVALLEQLVIYQVGVIPSQYYEVLGNKDFSGFKTLTATALTLIVVNSTLKSFNQFICNMMYVSWRKSLTEYLHSCYFQGQVYYSLHVLREDIDNPDQRISQDVERFCRQLSSMASKLIISPFTLAYYTYQCFHSTGWLGPVSIFGYFIIGTIVNKVLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGRVEHMRTDRRLQSLLQTQRELIGKELWLYIGINTFGYMGSILSYVVIAVPIFSGVYSDLSPTELSALVSKNAFVSIYLIGCFSQLIDLSSTVTDVAGYTHRIGELQETLLSL----GRKKKTYSEAKASWDLDSSHSGEDPVPLDTAFLLERVTLSVPSSGKLLIKDLSLRISQGNSVMIVGNTGTGKTSLLRVLGGLWESTQGSIKMLTCFGPRGVVFLPQRPFFTDGSLREQVIYPLKEIYPVSGSADDERIVRFLELAGLTDLLARAGG-LDEQVDWNWYDILSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVEHELYRVCLQLGMTLISVGHRASLEKFHSWILKLH-GEGRWEL 580
BLAST of abc subfamily abcd vs. nr
Match: gi|224051485|ref|XP_002199934.1| (PREDICTED: ATP-binding cassette sub-family D member 4 [Taeniopygia guttata]) HSP 1 Score: 496.508 bits (1277), Expect = 1.381e-165 Identity = 260/589 (44.14%), Postives = 372/589 (63.16%), Query Frame = 0 Query: 9 FNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVS--NHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTL 595 +GL+LRRF R+ A+LFPGW + + +F L+G+A LEQ + VG++ +YY+VLG++D++GF+T T +V I K ++ M+ V WR+SLT LH YF +Y L VL +DNPDQR++ DV + +++ L++ PFT+AYYTY + G GP +F +F++ T++NKVLMSP+V V+QE+ EGDFRF+H+ IR +AE AF+++ RVE ++ + RL L TQ+ L ++L L + TF Y GSI S++VIAIPIFSG+Y SP EL+ +VS+NAFV +YL+ F+QL+ +++TV+ +AG THRIGEL E L + + S D G D + ++ V++ P S+ +LI+DL+L + S++I+G + GK+S LRV+ GLW GS+ F P V FLPQ PFFTDG+LREQ++YPL+ I + I R L GL DL+AR GG LD W+W D LSPGEMQRL+F RLF+ QPK A LDEATSAL+ ++E LY+ CL + L+SVGHR SL+++H IL + +G W L Sbjct: 61 LDGLFLRRFLRILAVLFPGWPSPSALMFLTLLGVALLEQLVIYQVGVIPSQYYEVLGKKDFSGFKTLTAVSVTLIIVNSTLKSFDQFICNMMYVNWRKSLTEYLHSCYFQGQVYYNLLVLREDIDNPDQRISQDVERFCRQLSSMVSKLVISPFTLAYYTYQCFHSTGWLGPVSIFGYFVIGTMINKVLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGRVEHMRTNRRLQSLLKTQRELIGKELWLSIGINTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSSLVSKNAFVSIYLIGCFSQLIDLSSTVTDVAGYTHRIGELQETLLSLGRKKNGNYSEAKTSWDLDGSHSGE--DPVPSDTAFLLERVTLSVPSSDKLLIKDLSLRISQGNSVMIVGNTGTGKTSFLRVLGGLWESTRGSIRMLTCFGPRGVVFLPQRPFFTDGSLREQVIYPLKEIYPLSGSADDERIVRFLELAGLTDLLARTGG-LDEQVDWNWYDILSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVEHELYRMCLQLGMTLISVGHRPSLEKFHSWILKLH-GEGRWEL 645
BLAST of abc subfamily abcd vs. nr
Match: gi|960965372|ref|XP_014797466.1| (PREDICTED: ATP-binding cassette sub-family D member 4 isoform X2 [Calidris pugnax]) HSP 1 Score: 494.967 bits (1273), Expect = 2.752e-165 Identity = 262/591 (44.33%), Postives = 369/591 (62.44%), Query Frame = 0 Query: 9 FNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPN--VIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVS--NHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTL 595 +GL+LRRF RL A+LFPGW + +F L+ +A LEQ + VG++ +YY+VLG +D+AGF+T T A+ I K ++ M+ V WR+SLT LH YF +Y L+VL +DNPDQR++ DV + + + +++ PFT+AYYTY + G GP +F +F++ T++NKVLMSP+V V+QE+ EGDFRF+H+ IR +AE AF+++ RVE ++ D RL RL TQ+ L ++L L + TF Y GSI S++VIAIPIFSG+Y SP EL+ +VS+NAFV +YL+ F+QL+ +++TV+ +AG THRIGEL E L + K N S + + P ++ V++ P S +LI+DLNL + S++I+G + GK+SLLRV+ GLW GS+ F P V FLPQ PFFTDG+LREQ++YPL+ I + I R L GL DL+ R GG LD W+W D LSPGEMQRL+F RLF+ QPK A LDEATSAL+ ++E +Y+ CL + L+SVGHR SL+++H IL + +G W L Sbjct: 21 LDGLFLRRFLRLQAVLFPGWPSSGVLMFLTLLCVALLEQLVIYQVGVIPSQYYEVLGNKDFAGFKTLTAVALTLIVVNSTLKSFDQFICNMMYVSWRKSLTEYLHGCYFQGQVYYSLHVLREDIDNPDQRISQDVERFCRQLSSMASKIVISPFTLAYYTYQCFHSTGWLGPVSIFGYFIIGTIVNKVLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGRVEHMRTDRRLQRLLQTQRELIGKELWLYIGINTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSALVSKNAFVSIYLIGCFSQLIDLSSTVTDVAGYTHRIGELQETLLSL-----GRKKNDNYSEAKASWDLDGHSREDPVPKDTAFLLERVTLSVPSSGKLLIKDLNLRISQGNSVMIVGNTGTGKTSLLRVLGGLWESTRGSIKMLTCFGPRGVVFLPQRPFFTDGSLREQVIYPLKEIYPVSGSVDDERIVRFLELAGLTDLLERAGG-LDEQVDWNWYDILSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVEHEMYRVCLQLGMTLISVGHRASLEKFHNWILKLH-GEGRWEL 604 The following BLAST results are available for this feature:
BLAST of abc subfamily abcd vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of abc subfamily abcd vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of abc subfamily abcd vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold96_size378025:54002..58604- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold96_size378025-snap-gene-0.23 ID=maker-scaffold96_size378025-snap-gene-0.23|Name=abc subfamily abcd|organism=Tigriopus kingsejongensis|type=gene|length=4603bp|location=Sequence derived from alignment at scaffold96_size378025:54002..58604- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'abc subfamily abcd' has the following synonyms
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