g1 s-specific cyclin-d3, maker-scaffold96_size378025-snap-gene-1.19 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of g1 s-specific cyclin-d3 vs. L. salmonis genes
Match: EMLSAG00000003477 (supercontig:LSalAtl2s:LSalAtl2s18:214560:217374:1 gene:EMLSAG00000003477 transcript:EMLSAT00000003477 description:"maker-LSalAtl2s18-augustus-gene-2.4") HSP 1 Score: 263.077 bits (671), Expect = 6.334e-87 Identity = 125/213 (58.69%), Postives = 159/213 (74.65%), Query Frame = 0 Query: 7 NGGSSLGLRAYGDPVIFHDERVLKTLLKKEARYIPQSPNYFQL-VQTEVEVHMRKNVADWMVELCEDQQAPAEIFCLAMNYFDRFLSVCVIASSQLQLLGAVCLLVAWKVREHAPISASRLVQYSAHNITHLNIMEWEVLLLSKLDWDVSSVIAFDFVEHIIQRIHRLNLGLNTDLIRSNAETLITMCSSHHTFYSSAPSLVAAACVLTTLRP 218 +GG + +AY DPVIF D+RVL L+ KE+ Y+P NY +Q E++ H R+ VADWM+E+CED+ E+F LAMNY DRFLSVC I+ SQLQLLGAVCLLV+WKVREH P+ AS+LV+YS N+T ++IMEWEVLLLSKLDWD+S+VIA DF+EHI+QR+ L++ N IR AE I +CSSH+ F S PSL+A ACVL +L P Sbjct: 13 DGGLTGATKAYDDPVIFRDDRVLDILMSKESNYVPAESNYLSTGIQHEIKPHNRREVADWMLEICEDRGVSPEVFVLAMNYLDRFLSVCTISKSQLQLLGAVCLLVSWKVREHRPLPASKLVEYSDFNLTLIDIMEWEVLLLSKLDWDMSAVIASDFLEHIVQRLTILDVSSNLVHIRQQAEARILLCSSHYEFSSINPSLIAIACVLASLEP 225
BLAST of g1 s-specific cyclin-d3 vs. L. salmonis genes
Match: EMLSAG00000003480 (supercontig:LSalAtl2s:LSalAtl2s18:601853:603120:-1 gene:EMLSAG00000003480 transcript:EMLSAT00000003480 description:"maker-LSalAtl2s18-augustus-gene-6.5") HSP 1 Score: 193.741 bits (491), Expect = 4.295e-59 Identity = 108/272 (39.71%), Postives = 162/272 (59.56%), Query Frame = 0 Query: 6 PNGGS----SLGLRAYGDPVIFHDERVLKTLLKKEARYIPQSPNYFQLVQTEVEVHMRKNVADWMVELCEDQQAPAEIFCLAMNYFDRFLSVCVIASSQLQLLGAVCLLVAWKVREHAPISASRLVQYSAHNITHLNIMEWEVLLLSKLDWDVSSVIAFDFVEHIIQRIHRLNLGLNTDLIR--SNAETLITMCSSHHTFYSSAPSLVAAACVLTTLRPMIEGQWPHLLRDTPSPSSCSSGASSTSSPAKLKHL------DLELVLDEVERI 265 P GG + ++A DPV++ D+R+L+ LL+ E Y+P +P+YF+ VQ ++ MRK V DWM +LC++ A E+FCLAMNY DRFLS C + S+LQL+GAVCLLVA K RE PI RL+ Y+ +IT I +WE+LLL +L W++SSV +F++ I IHR+ + + DL+R AET+I + + F PSL+A+A + L+ ++ + PS C AS +L+ L DL+L + ++E+I Sbjct: 41 PGGGEQDPEAYPVKALNDPVLYKDDRILQNLLRLEENYLPSTPDYFKYVQKDISPPMRKIVGDWMXQLCQELSAAPEVFCLAMNYMDRFLSRCRVDKSKLQLVGAVCLLVASKFRETRPILGERLIFYTDFSITSEEIKDWELLLLQELRWELSSVTPLEFLDQI---IHRIGIHSSIDLVRLKQRAETIIVLSILEYKFSYLTPSLMASAGLFAALK---------VISNDPS-VLCEDVASYREIGLRLQTLTHIVASDLDLCMTQMEKI 299
BLAST of g1 s-specific cyclin-d3 vs. L. salmonis genes
Match: EMLSAG00000000386 (supercontig:LSalAtl2s:LSalAtl2s1060:22308:23429:-1 gene:EMLSAG00000000386 transcript:EMLSAT00000000386 description:"maker-LSalAtl2s1060-augustus-gene-0.9") HSP 1 Score: 171.014 bits (432), Expect = 6.870e-51 Identity = 86/208 (41.35%), Postives = 137/208 (65.87%), Query Frame = 0 Query: 15 RAYGDPVIFHDERVLKTLL--KKEARYIPQSPNYFQLVQTEVEVHMRKNVADWMVELCEDQQAPAEIFCLAMNYFDRFLSVCVIASSQLQLLGAVCLLVAWKVREHAPISASRLVQYSAHNITHLNIMEWEVLLLSKLDWDVSSVIAFDFVEHIIQRIHRLNL-GLNTDLIRSNAETLITMCSSHHTFYSSAPSLVAAACVLTTLRPM 219 ++Y DPV+ D R+L +L +K+A+ P+ NYF+ VQTEV+ HMRK V DWM+E+CEDQ+ AE+F LA+NY D FL+ I SQ QLL VC+ VA K +E AP+ A LV Y+ ++++ L I +WE++LL+ L+WD+S+V + ++H+++ LN+ +++ IR +AET + + ++ F P+ VA +C+ LR + Sbjct: 30 KSYEDPVLISDVRILSNILLREKDAQKSPKE-NYFECVQTEVKPHMRKIVTDWMLEVCEDQKCQAEVFSLAVNYLDGFLAKINIQKSQFQLLATVCIFVASKFKETAPVPAENLVIYTDNSVSILEITQWELILLNVLEWDLSAVTPYGILDHLLR---TLNIESSSSETIRRHAETFVALXATEFVFXQHGPAAVAVSCLGAALRGL 233
BLAST of g1 s-specific cyclin-d3 vs. L. salmonis genes
Match: EMLSAG00000008632 (supercontig:LSalAtl2s:LSalAtl2s532:134832:139245:-1 gene:EMLSAG00000008632 transcript:EMLSAT00000008632 description:"snap_masked-LSalAtl2s532-processed-gene-1.4") HSP 1 Score: 135.576 bits (340), Expect = 1.473e-37 Identity = 76/220 (34.55%), Postives = 118/220 (53.64%), Query Frame = 0 Query: 13 GLRAYGDPVIFHDERVLKTLLKKEARYIPQSPNYFQLVQTEVEVHMRKNVADWMVELCEDQQAPAEIFCLAMNYFDRFLSVCV-IASSQLQLLGAVCLLVAWKVREHAPISASRLVQYSAHNITHLNIMEWEVLLLSKLDWDVSSVIAFDFVEHIIQRIHRL-NLGLNTDLIRSNAETLITMCSSHHTFY---------SSAPSLVAAACVLTTLRPMIE 221 G+++Y DP + D RVL+ +L+ SP + Q EV MRK V DWM+E+CE++ E+F LA+NY DRFL I S QLL C+ +A K +E +PI A +L Y+ + I EWE+ +LS L W +S + + ++ I++RI+ + + + D IR +AET I + ++ + FY + +L+AA T PM E Sbjct: 27 GIKSYEDPALIGDLRVLRNVLQTST---SSSPVNYIAFQNEVTTSMRKIVTDWMLEVCEEENCHGEVFHLAVNYLDRFLCATKDIKKSNFQLLACACIFLASKFKETSPIIADKLSVYTDFAFSTSEITEWELCVLSVLGWXLSIITPYTVLDQIMRRINGVESCSFDMDTIRRHAETFIALSATEYEFYLAFEGRPTVLAVGALIAAFSGFATSDPMTE 243
BLAST of g1 s-specific cyclin-d3 vs. L. salmonis genes
Match: EMLSAG00000003481 (supercontig:LSalAtl2s:LSalAtl2s18:771157:772479:-1 gene:EMLSAG00000003481 transcript:EMLSAT00000003481 description:"maker-LSalAtl2s18-augustus-gene-7.3") HSP 1 Score: 131.724 bits (330), Expect = 2.702e-35 Identity = 75/213 (35.21%), Postives = 120/213 (56.34%), Query Frame = 0 Query: 12 LGLRAYGDPVIFHDERVLKTLLKKEARYIPQSPNYFQLVQTE-VEVHMRKNVADWMVELCEDQQAPAEIFCLAMNYFDRFLSVCVIAS-SQLQLLGAVCLLVAWKVREHAPISASRLVQYSAHNITHLNIMEWEVLLLSKLDWDVSSVIAFDFVEHIIQRIHRLNLGLNTDLIRSNAETLITMCSSHHTFYSSAPSLVAAACVLTTLRPMIEG 222 L +RA DP F +R+L LL E ++P ++ + VQ + R+ + +WM ++ + + + FCLAMN DRFLS+ + S SQLQLLG V LLVA K+R+ I L+ Y+ H+IT I +WE LLL KL W++ + F +++H++ R+ L+ R AET++ + ++ + F S PS +AA+ +L R + E Sbjct: 35 LTVRAEPDPA-FLKKRILHNLLSNEKDFLPIHKDFLKEVQRGCITDEHRRILGEWMRDVVFEVGSGPDTFCLAMNLLDRFLSLVPLGSPSQLQLLGTVTLLVASKLRDSESIPGRSLIIYTDHSITSKEIKDWEWLLLQKLGWEIXGITPFXYLDHLLPRLS-FPSSLDMKEFRKFAETILVLVANEYAFTSLPPSRIAASAILIAYRRLSEN 245
BLAST of g1 s-specific cyclin-d3 vs. L. salmonis genes
Match: EMLSAG00000008636 (supercontig:LSalAtl2s:LSalAtl2s532:19936:22057:1 gene:EMLSAG00000008636 transcript:EMLSAT00000008636 description:"maker-LSalAtl2s532-augustus-gene-0.5") HSP 1 Score: 70.0922 bits (170), Expect = 1.022e-13 Identity = 44/130 (33.85%), Postives = 71/130 (54.62%), Query Frame = 0 Query: 43 SPNYFQLVQTEVEVHMRKNVADWMVELC-----EDQQAPAEIFCLAMNYFDRFLSVCVIASSQLQLLGAVCLLVAWKVREHAP-ISASRLVQYSAHNITHLNIMEWEVLLLSKLDWDVSSVIAFDFVEHI 166 S ++ +L Q E+ R ++ W+ +LC E +I +A + D+FL+VC I SQLQL G VC+ +A K+ I S L+ + +I + WE+L+LSKL+W++ VI D+ E+I Sbjct: 24 SGHWNRLDQPEISHDDRTSLLQWIHDLCLKERDESLDTRYKIPVMAXDILDKFLNVCRIKKSQLQLTGVVCVSLASKIIPGVRLIPLSNLIGATDDSIKGNEVKAWELLVLSKLNWNLECVIPQDYFENI 153
BLAST of g1 s-specific cyclin-d3 vs. L. salmonis genes
Match: EMLSAG00000009241 (supercontig:LSalAtl2s:LSalAtl2s588:508734:510418:-1 gene:EMLSAG00000009241 transcript:EMLSAT00000009241 description:"maker-LSalAtl2s588-augustus-gene-4.41") HSP 1 Score: 68.1662 bits (165), Expect = 5.224e-13 Identity = 38/145 (26.21%), Postives = 67/145 (46.21%), Query Frame = 0 Query: 22 IFHDERVLKTLLKKEARYIPQSPNYFQLVQTEVEVHMRKNVADWMVELCEDQQAPAEIFCLAMNYFDRFLSVCVIASSQLQLLGAVCLLVAWKVREHAPISASRLVQYSAHNITHLNIMEWEVLLLSKLDWDVSSVIAFDFVEHI 166 IFH + ++ L + Y+ + P+ + MR + DW+ E E+ E L++NY DRFLS + ++LQL+G C+ +A K E P + + + ++ E L+L L +D++ A+ FV Sbjct: 169 IFHYLKGTESKLMPKWNYMTKQPD--------ITFTMRSILVDWLXEXAEEYNLCTETLYLSVNYIDRFLSYMSVQRAKLQLVGTACMFIAAKYEEIYPPEVNEFTYITDDTYSKKQVLRMEHLVLKVLGFDLTMPTAYFFVNQF 305
BLAST of g1 s-specific cyclin-d3 vs. L. salmonis genes
Match: EMLSAG00000000681 (supercontig:LSalAtl2s:LSalAtl2s1107:82553:208941:1 gene:EMLSAG00000000681 transcript:EMLSAT00000000681 description:"maker-LSalAtl2s1107-augustus-gene-1.34") HSP 1 Score: 50.0618 bits (118), Expect = 5.294e-7 Identity = 31/118 (26.27%), Postives = 53/118 (44.92%), Query Frame = 0 Query: 51 QTEVEVHMRKNVADWMVELCEDQQAPAEIFCLAMNYFDRFLSVCVIASSQLQLLGAVCLLVAWKVREHAPISASRLVQYSAHNITHLNIMEWEVLLLSKLDWDVSSVIAFDFVEHIIQ 168 Q ++ MR V W++ + E +CL++N+ DRFL + LQL G +A K E P S LV A + + E +LL+ L +D + F+ ++++ Sbjct: 232 QNDITEVMRGTVLRWLIAVNRQFDFTLETWCLSVNFLDRFLCQQALNRDCLQLAGLTAFFLAAKQEEVDPPEISELVTLCARSFERKHFRYMEYILLNHLHFDFLAPTPSYFLLYLVE 349
BLAST of g1 s-specific cyclin-d3 vs. SwissProt
Match: gi|75025508|sp|Q9U2M5.1|CCND_CAEEL (RecName: Full=G1/S-specific cyclin-D) HSP 1 Score: 95.1301 bits (235), Expect = 1.342e-20 Identity = 52/191 (27.23%), Postives = 99/191 (51.83%), Query Frame = 0 Query: 19 DPVIFHDERVLKTLLKKEARYIPQSPNYFQLVQTEVEVHMRKNVADWMVELCEDQQAPAEIFCLAMNYFDRFLSVCVIASSQLQLLGAVCLLVAWKVREHAPISASRLVQYSAHNITHLNIMEWEVLLLSKLDWDVSSVIAFDFVEHIIQRIHRLNLGLNTDLIRSNAETLITMCSSHHTFYSSAPSLVAA 209 DP I D R ++ E P +YF VQ + R+ DW+ ++ +++ ++F LA++ DRF+SV I +Q++ V L +A K++ P++AS++ YS ++ I++WE+L+++ L W+ S AF F + + RI +++ +R + +T++ C H + PS+ A Sbjct: 66 DPHIQLDMRAFYNCMEYEEALQPNY-HYFTGVQENITPFHREQAIDWIYDVAKEENCDGDVFLLAVSLIDRFMSVQNILKHDIQMIAGVALFIASKLKAPHPMTASKIAYYSDNSCPIDMILQWELLIVTTLQWETESPTAFSFFDFLASRIPQIH------NMRGDFQTVVQKCQKMHKLATLFPSMQCA 249
BLAST of g1 s-specific cyclin-d3 vs. SwissProt
Match: gi|231745|sp|Q01043.1|CGH2_SHV21 (RecName: Full=Cyclin homolog; AltName: Full=V-cyclin) HSP 1 Score: 79.337 bits (194), Expect = 7.394e-16 Identity = 49/149 (32.89%), Postives = 77/149 (51.68%), Query Frame = 0 Query: 15 RAYGDPVIFHDERVLKTLLKKEARYIPQSPNYFQLVQTEVEVHMRKNVADWMVELCEDQQAPAEIFCLAMNYFDRFLSVCVIASSQLQLLGAVCLLVAWKVREHAPISASRLVQYSAHNITHLNIMEWEVLLLSKLDWDVSSVIAFDFV 163 RA D D RVL L +E +P+ + ++ +QTEV V R + WM LCE + +F L+++ DR+L LQ +GA C+L+ K+R P++ S+L S T+L ++ E +L L WD +V+A DF+ Sbjct: 10 RAKIDSTTMKDPRVLNNLKLREL-LLPKFTSLWE-IQTEVTVDNRTILLTWMHLLCESFELDKSVFPLSVSILDRYLCKKQGTKKTLQKIGAACVLIGSKIRTVKPMTVSKLTYLSCDCFTNLELINQEKDILEALKWDTEAVLATDFL 156
BLAST of g1 s-specific cyclin-d3 vs. SwissProt
Match: gi|1705771|sp|P51986.1|CCNA_HYDVD (RecName: Full=G2/mitotic-specific cyclin-A) HSP 1 Score: 78.1814 bits (191), Expect = 8.361e-15 Identity = 47/132 (35.61%), Postives = 73/132 (55.30%), Query Frame = 0 Query: 32 LLKKEARYIPQSPNYFQLVQTEVEVHMRKNVADWMVELCEDQQAPAEIFCLAMNYFDRFLSVCVIASSQLQLLGAVCLLVAWKVREHAPISASRLVQYSAHNITHLNIMEWEVLLLSKLDWDVSSVIAFDFV 163 L K EA+Y P+S NY + QT++ MR + DW+VE+ E+ + + L+++Y DRFLS + +LQL+GA C+LVA K E P + V + T ++ E L+L L +D+S DF+ Sbjct: 173 LKKSEAKYRPKS-NYMR-KQTDINSSMRAILIDWLVEVSEEYKLIPQTLYLSVSYIDRFLSHMSVLRGKLQLVGAACMLVAAKFEEIYPPEVAEFVYITDDTYTAKQVLRMEHLILKTLAFDLSVPTCRDFL 302
BLAST of g1 s-specific cyclin-d3 vs. SwissProt
Match: gi|147636713|sp|Q8LGA1.2|CCD41_ARATH (RecName: Full=Cyclin-D4-1; AltName: Full=G1/S-specific cyclin-D4-1; Short=CycD4;1) HSP 1 Score: 75.8702 bits (185), Expect = 2.359e-14 Identity = 53/195 (27.18%), Postives = 100/195 (51.28%), Query Frame = 0 Query: 26 ERVLKTLLKKEARYIPQSPNYFQLVQTEVEVHM-RKNVADWMVELCEDQQAPAEIFCLAMNYFDRFLSVCVIASSQ---LQLLGAVCLLVAWKVRE-HAPISASRLVQYSAHNITHLNIMEWEVLLLSKLDWDVSSVIAFDFVEHIIQRIHRLNLGLNTDLIRSNAETLITMCSSHHTFYSSAPSLVAAACVLTT 215 E ++ +++KE +++P +L ++++++ R++ +W+ + CE Q FCLAMNY DRFLSV + S + LQLL CL +A K+ E P+ V ++ E+L+L+KL W + ++ ++ + ++++ + + + LI S + +I + F PS VAAA L+ Sbjct: 44 EEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLI-SRSLQVIASTTKGIDFLEFRPSEVAAAVALSV 237
BLAST of g1 s-specific cyclin-d3 vs. SwissProt
Match: gi|8134359|sp|P78396.1|CCNA1_HUMAN (RecName: Full=Cyclin-A1) HSP 1 Score: 75.8702 bits (185), Expect = 6.252e-14 Identity = 55/205 (26.83%), Postives = 96/205 (46.83%), Query Frame = 0 Query: 24 HDERVLKTLLKKEARYIPQSPNYFQLVQTEVEVHMRKNVADWMVELCEDQQAPAEIFCLAMNYFDRFLSVCVIASSQLQLLGAVCLLVAWKVREHAPISASRLVQYSAHNITHLNIMEWEVLLLSKLDWDVSSVIAFDFVEHIIQRIHRLNLGLNTDLIRSNAETLITMCSSHHTFYSSAPSLVAAACVLTTLRPMIEGQWPHLL 228 + E + + L + E R+ P++ ++ Q ++ MR + DW+VE+ E+ + AE LA+N+ DRFLS + +LQL+G +L+A K E P V + T +++ E LLL L +D++ F ++Q + R + + T+ + L + F PSL+AAA + + WP L Sbjct: 211 YAEEIYQYLREAEIRHRPKA--HYMKKQPDITEGMRTILVDWLVEVGEEYKLRAETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAMLLASKYEEIYPPEVDEFVYITDDTYTKRQLLKMEHLLLKVLAFDLTVPTTNQF---LLQYLRRQGVCVRTENLAKYVAELSLL--EADPFLKYLPSLIAAAAFCLANYTVNKHFWPETL 408
BLAST of g1 s-specific cyclin-d3 vs. nr
Match: gi|465996625|ref|XP_004267656.1| (PREDICTED: G1/S-specific cyclin-D3 isoform X1 [Orcinus orca] >gi|472377388|ref|XP_004408122.1| PREDICTED: G1/S-specific cyclin-D3 isoform X1 [Odobenus rosmarus divergens] >gi|560959235|ref|XP_006202071.1| PREDICTED: G1/S-specific cyclin-D3 isoform X1 [Vicugna pacos] >gi|593763526|ref|XP_007120364.1| G1/S-specific cyclin-D3 isoform X2 [Physeter catodon] >gi|594091749|ref|XP_006069245.1| PREDICTED: G1/S-specific cyclin-D3 isoform X3 [Bubalus bubalis] >gi|594626614|ref|XP_007197934.1| PREDICTED: G1/S-specific cyclin-D3 isoform X1 [Balaenoptera acutorostrata scammoni] >gi|602692323|ref|XP_007458271.1| PREDICTED: G1/S-specific cyclin-D3 isoform X2 [Lipotes vexillifer] >gi|664759127|ref|XP_008537117.1| PREDICTED: G1/S-specific cyclin-D3 [Equus przewalskii] >gi|742215833|ref|XP_010861478.1| PREDICTED: G1/S-specific cyclin-D3 isoform X3 [Bison bison bison] >gi|744556669|ref|XP_010975636.1| PREDICTED: G1/S-specific cyclin-D3 [Camelus dromedarius] >gi|958807704|ref|XP_014686310.1| PREDICTED: G1/S-specific cyclin-D3 isoform X1 [Equus asinus] >gi|1062950349|ref|XP_017894222.1| PREDICTED: G1/S-specific cyclin-D3 isoform X2 [Capra hircus] >gi|1131231826|ref|XP_019841486.1| PREDICTED: G1/S-specific cyclin-D3 isoform X1 [Bos indicus] >gi|1246183419|ref|XP_022437599.1| G1/S-specific cyclin-D3 isoform X1 [Delphinapterus leucas] >gi|1333601271|ref|XP_023480695.1| G1/S-specific cyclin-D3 isoform X1 [Equus caballus] >gi|296474442|tpg|DAA16557.1| TPA: G1/S-specific cyclin-D3 [Bos taurus]) HSP 1 Score: 186.808 bits (473), Expect = 2.477e-53 Identity = 108/300 (36.00%), Postives = 172/300 (57.33%), Query Frame = 0 Query: 9 GSSLGLRAYGDPVIFHDERVLKTLLKKEARYIPQSPNYFQLVQTEVEVHMRKNVADWMVELCEDQQAPAEIFCLAMNYFDRFLSVCVIASSQLQLLGAVCLLVAWKVREHAPISASRLVQYSAHNITHLNIMEWEVLLLSKLDWDVSSVIAFDFVEHIIQRIHRLNLGLNTD-LIRSNAETLITMCSSHHTFYSSAPSLVAAACVLTTLRPMIEGQWPHLLRDTPSPSSCSSGASSTSSPAKLKHLDLELVLDEVERITLIEKGLIRKVMDQVELL----TRSAFPPSPLSSPLSKHGSS 303 G+ RA DP + D+RVL++LL+ E RY+P++ +YFQ VQ E++ HMRK +A WM+E+CE+Q+ E+F LAMNY DR+LS +QLQLLGAVC+L+A K+RE P++ +L Y+ H+++ + +WEVL+L KL WD+++VIA DF+ I +HRL+L + L++ +A+T + +C++ +TF PS++A + ++ + GA STS + + + + IT E +R +Q+E R A SP +P + GSS Sbjct: 8 GTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRA-SYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHSVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLALI---LHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGL--------------------GACSTSG---------DELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSPSPAPKAPRGSS 274
BLAST of g1 s-specific cyclin-d3 vs. nr
Match: gi|345778759|ref|XP_864857.2| (G1/S-specific cyclin-D3 isoform X1 [Canis lupus familiaris]) HSP 1 Score: 186.808 bits (473), Expect = 2.670e-53 Identity = 108/300 (36.00%), Postives = 172/300 (57.33%), Query Frame = 0 Query: 9 GSSLGLRAYGDPVIFHDERVLKTLLKKEARYIPQSPNYFQLVQTEVEVHMRKNVADWMVELCEDQQAPAEIFCLAMNYFDRFLSVCVIASSQLQLLGAVCLLVAWKVREHAPISASRLVQYSAHNITHLNIMEWEVLLLSKLDWDVSSVIAFDFVEHIIQRIHRLNLGLNTD-LIRSNAETLITMCSSHHTFYSSAPSLVAAACVLTTLRPMIEGQWPHLLRDTPSPSSCSSGASSTSSPAKLKHLDLELVLDEVERITLIEKGLIRKVMDQVELL----TRSAFPPSPLSSPLSKHGSS 303 G+ RA DP + D+RVL++LL+ E RY+P++ +YFQ VQ E++ HMRK +A WM+E+CE+Q+ E+F LAMNY DR+LS +QLQLLGAVC+L+A K+RE P++ +L Y+ H+++ + +WEVL+L KL WD+++VIA DF+ I +HRL+L + L++ +A+T + +C++ +TF PS++A + ++ + GA STS + + + + IT E +R +Q+E R A SP +P + GSS Sbjct: 8 GTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRA-SYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHSVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLALI---LHRLSLPQDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGL--------------------GACSTSG---------DELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSPSPAPKAPRGSS 274
BLAST of g1 s-specific cyclin-d3 vs. nr
Match: gi|640808479|ref|XP_008060769.1| (G1/S-specific cyclin-D3 isoform X1 [Carlito syrichta]) HSP 1 Score: 186.422 bits (472), Expect = 3.102e-53 Identity = 93/218 (42.66%), Postives = 145/218 (66.51%), Query Frame = 0 Query: 9 GSSLGLRAYGDPVIFHDERVLKTLLKKEARYIPQSPNYFQLVQTEVEVHMRKNVADWMVELCEDQQAPAEIFCLAMNYFDRFLSVCVIASSQLQLLGAVCLLVAWKVREHAPISASRLVQYSAHNITHLNIMEWEVLLLSKLDWDVSSVIAFDFVEHIIQRIHRLNLGLNTD-LIRSNAETLITMCSSHHTFYSSAPSLVAAACVLTTLRPMIEGQWP 225 G+ RA DP + D+RVL++LL+ E RY+P+ +YFQ VQ E++ HMRK +A WM+E+CE+Q+ E+F LAMNY DR+LS +QLQLLGAVC+L+A K+RE P++ +L Y+ H ++ + EWEVL+L KL WD+++VIA DF+ I +HRL+L + L++ +A+T + +C++ +TF PS++A + ++ + G WP Sbjct: 8 GTRHAPRASLDPRLLGDQRVLQSLLRLEERYVPRI-SYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPGQLREWEVLVLGKLKWDLAAVIAHDFLALI---LHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGL--GAWP 219
BLAST of g1 s-specific cyclin-d3 vs. nr
Match: gi|591317969|ref|XP_007085259.1| (PREDICTED: G1/S-specific cyclin-D3 isoform X1 [Panthera tigris altaica] >gi|1111156324|ref|XP_019312661.1| PREDICTED: G1/S-specific cyclin-D3 isoform X1 [Panthera pardus]) HSP 1 Score: 186.422 bits (472), Expect = 3.723e-53 Identity = 89/205 (43.41%), Postives = 141/205 (68.78%), Query Frame = 0 Query: 9 GSSLGLRAYGDPVIFHDERVLKTLLKKEARYIPQSPNYFQLVQTEVEVHMRKNVADWMVELCEDQQAPAEIFCLAMNYFDRFLSVCVIASSQLQLLGAVCLLVAWKVREHAPISASRLVQYSAHNITHLNIMEWEVLLLSKLDWDVSSVIAFDFVEHIIQRIHRLNLGLNTD-LIRSNAETLITMCSSHHTFYSSAPSLVAAACV 212 G+ RA DP + D+RVL++LL+ E RY+P++ +YFQ VQ E++ HMRK +A WM+E+CE+Q+ E+F LAMNY DR+LS +QLQLLGAVC+L+A K+RE P++ +L Y+ H+++ + +WEVL+L KL WD+++VIA DF+ I +HRL+L + L++ +A+T + +C++ +TF PS++A + Sbjct: 8 GTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRA-SYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHSVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLALI---LHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSI 208
BLAST of g1 s-specific cyclin-d3 vs. nr
Match: gi|667260081|ref|XP_008567137.1| (PREDICTED: G1/S-specific cyclin-D3 isoform X1 [Galeopterus variegatus]) HSP 1 Score: 186.422 bits (472), Expect = 4.013e-53 Identity = 90/205 (43.90%), Postives = 139/205 (67.80%), Query Frame = 0 Query: 9 GSSLGLRAYGDPVIFHDERVLKTLLKKEARYIPQSPNYFQLVQTEVEVHMRKNVADWMVELCEDQQAPAEIFCLAMNYFDRFLSVCVIASSQLQLLGAVCLLVAWKVREHAPISASRLVQYSAHNITHLNIMEWEVLLLSKLDWDVSSVIAFDFVEHIIQRIHRLNLGLNTD-LIRSNAETLITMCSSHHTFYSSAPSLVAAACV 212 G+ RA DP + D+RVL++LL+ E RY+P++ +YFQ VQ E++ HMRK +A WM+E+CE+Q+ E+F LAMNY DR+LS +QLQLLG VC+L+A K+RE P++ +L Y+ H ++ + EWEVL+L KL WD+++VIA DF+ I +HRL+L + L+R +A+T + +C++ +TF PS++A + Sbjct: 8 GTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRT-SYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGTVCMLLASKLRETTPLTIEKLCIYTDHAVSPPQLREWEVLVLGKLKWDLAAVIAHDFLALI---LHRLSLPSDRQALVRKHAQTFLALCATDYTFAMYPPSMIATGSI 208 The following BLAST results are available for this feature:
BLAST of g1 s-specific cyclin-d3 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 8
BLAST of g1 s-specific cyclin-d3 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of g1 s-specific cyclin-d3 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold96_size378025:161694..163193- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold96_size378025-snap-gene-1.19 ID=maker-scaffold96_size378025-snap-gene-1.19|Name=g1 s-specific cyclin-d3|organism=Tigriopus kingsejongensis|type=gene|length=1500bp|location=Sequence derived from alignment at scaffold96_size378025:161694..163193- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'g1 s-specific cyclin-d3' has the following synonyms
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