g1 s-specific cyclin- partial, maker-scaffold96_size378025-snap-gene-1.20 (gene) Tigriopus kingsejongensis

Overview


Name	g1 s-specific cyclin- partial
Unique Name	maker-scaffold96_size378025-snap-gene-1.20
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of g1 s-specific cyclin- partial vs. L. salmonis genes
Match: EMLSAG00000000386 (supercontig:LSalAtl2s:LSalAtl2s1060:22308:23429:-1 gene:EMLSAG00000000386 transcript:EMLSAT00000000386 description:"maker-LSalAtl2s1060-augustus-gene-0.9")

HSP 1 Score: 55.8398 bits (133), Expect = 2.885e-9
Identity = 46/146 (31.51%), Postives = 73/146 (50.00%), Query Frame = 0

Query:   16 LIARSDPNPFRILQ--SMELLILSHLKWDLMAVTAYDYLDYLLDVLQTPSAHVGDEEVLQEPGHIESLRRQSERLITLCNTDPHFMSVTPSLVASAALTSAMQQDLESQPPMGPTVN-LNDVVQKLRKYTEIEMDSLRHCIDQIEE 158
            L+  +D N   IL+    EL++L+ L+WDL AVT Y  LD+LL  L              E    E++RR +E  + L  T+  F    P+ VA + L +A++         G  V+ L+ V++ L   T +   +++ C+DQIEE
Sbjct:  142 LVIYTD-NSVSILEITQWELILLNVLEWDLSAVTPYGILDHLLRTLNI------------ESSSSETIRRHAETFVALXATEFVFXQHGPAAVAVSCLGAALR---------GLNVSTLSSVLEHLHYTTGVNTITIKDCMDQIEE 265

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BLAST of g1 s-specific cyclin- partial vs. L. salmonis genes
Match: EMLSAG00000003477 (supercontig:LSalAtl2s:LSalAtl2s18:214560:217374:1 gene:EMLSAG00000003477 transcript:EMLSAT00000003477 description:"maker-LSalAtl2s18-augustus-gene-2.4")

HSP 1 Score: 53.1434 bits (126), Expect = 1.715e-8
Identity = 33/104 (31.73%), Postives = 58/104 (55.77%), Query Frame = 0

Query:   14 STLIARSDPNPFRI-LQSMELLILSHLKWDLMAVTAYDYLDYLLDVLQTPSAHVGDEEVLQEPGHIESLRRQSERLITLCNTDPHFMSVTPSLVASAALTSAMQ 116
            S L+  SD N   I +   E+L+LS L WD+ AV A D+L++++  L           +L    ++  +R+Q+E  I LC++   F S+ PSL+A A + ++++
Sbjct:  131 SKLVEYSDFNLTLIDIMEWEVLLLSKLDWDMSAVIASDFLEHIVQRLT----------ILDVSSNLVHIRQQAEARILLCSSHYEFSSINPSLIAIACVLASLE 224

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BLAST of g1 s-specific cyclin- partial vs. SwissProt
Match: gi|122145325|sp|Q0P5D3.1|CCND2_BOVIN (RecName: Full=G1/S-specific cyclin-D2)

HSP 1 Score: 65.4698 bits (158), Expect = 3.525e-11
Identity = 48/166 (28.92%), Postives = 81/166 (48.80%), Query Frame = 0

Query:   28 LQSMELLILSHLKWDLMAVTAYDYLDYLLDVLQTPSAHVGDEEVLQEPGHIESLRRQSERLITLCNTDPHFMSVTPSLVASAALTSA---MQQDLESQPPMGPTVNLNDVVQKLRKYTEIEMDSLRHCIDQIEELFISGATPRPQSPSSGPGLHKESAMDGTTTTT 190
            L   EL++L  LKW+L AVT +D+++++L  L  PS  +              +R+ ++  I LC TD  F    PS++A+ ++ +A   +QQD +     G     + +V  L K T  ++D L+ C +QIE + ++      Q    G G   E  +D  +T T
Sbjct:  136 LLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQPSEKLS------------LIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAAICGLQQDEDVSSLTG-----DALVDLLAKITNTDVDCLKACQEQIEVVLLNSLQQYRQ--DQGDGSKSEDELDQASTPT 282

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BLAST of g1 s-specific cyclin- partial vs. SwissProt
Match: gi|20981685|sp|P30281.2|CCND3_HUMAN (RecName: Full=G1/S-specific cyclin-D3)

HSP 1 Score: 64.6994 bits (156), Expect = 7.304e-11
Identity = 48/163 (29.45%), Postives = 84/163 (51.53%), Query Frame = 0

Query:   26 RILQSMELLILSHLKWDLMAVTAYDYLDYLLDVLQTPSAHVGDEEVLQEPGHIESLRRQSERLITLCNTDPHFMSVTPSLVASAALTSAMQQDLESQPPMGP-TVNLNDVVQKLRKYTEIEMDSLRHCIDQIE--------ELFISGATPRPQSP----SSGP 175
            R L+  E+L+L  LKWDL AV A+D+L ++L  L  P     D + L        +++ ++  + LC TD  F    PS++A+ ++ +A+Q        +G  +++ +++ + L   T  E+D LR C +QIE        E   + ++P P++P    S GP
Sbjct:  135 RQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPR----DRQAL--------VKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQG-------LGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGP 278

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BLAST of g1 s-specific cyclin- partial vs. SwissProt
Match: gi|231742|sp|P30280.1|CCND2_MOUSE (RecName: Full=G1/S-specific cyclin-D2)

HSP 1 Score: 63.1586 bits (152), Expect = 2.505e-10
Identity = 41/139 (29.50%), Postives = 73/139 (52.52%), Query Frame = 0

Query:   28 LQSMELLILSHLKWDLMAVTAYDYLDYLLDVLQTPSAHVGDEEVLQEPGHIESLRRQSERLITLCNTDPHFMSVTPSLVASAALTSA---MQQDLESQPPMGPTVNLNDVVQKLRKYTEIEMDSLRHCIDQIEELFISG 163
            L   EL++L  LKW+L AVT +D+++++L  L             Q+   +  +R+ ++  I LC TD  F    PS++A+ ++ +A   +QQD E       T+  + + + L K T  ++D L+ C +QIE L ++ 
Sbjct:  135 LLEWELVVLGKLKWNLAAVTPHDFIEHILRKLP------------QQKEKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAAICGLQQDDEVN-----TLTCDALTELLAKITHTDVDCLKACQEQIEALLLNS 256

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BLAST of g1 s-specific cyclin- partial vs. SwissProt
Match: gi|115312216|sp|Q3MHH5.1|CCND3_BOVIN (RecName: Full=G1/S-specific cyclin-D3)

HSP 1 Score: 61.6178 bits (148), Expect = 7.595e-10
Identity = 49/168 (29.17%), Postives = 79/168 (47.02%), Query Frame = 0

Query:   26 RILQSMELLILSHLKWDLMAVTAYDYLDYLLDVLQTPSAHVGDEEVLQEPGHIESLRRQSERLITLCNTDPHFMSVTPSLVASAALTSAMQQDLESQPPMGPTVNLND-VVQKLRKYTEIEMDSLRHCIDQIEELFISGATPRPQ-SPSSGPGLHKESAMDGTTTTTS 191
            R L+  E+L+L  LKWDL AV A+D+L  +L  L  P     D + L        +++ ++  + LC TD  F    PS++A+ ++ +A+Q        +G      D + + L      E+D LR C +QIE           Q SPS  P   + S+  G + T++
Sbjct:  135 RQLRDWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPR----DRQAL--------VKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQG-------LGACSTSGDELTELLAGIAGTEVDCLRACQEQIEAALRESLREAAQTSPSPAPKAPRGSSSQGPSQTST 283

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BLAST of g1 s-specific cyclin- partial vs. SwissProt
Match: gi|231741|sp|P30279.1|CCND2_HUMAN (RecName: Full=G1/S-specific cyclin-D2)

HSP 1 Score: 61.6178 bits (148), Expect = 8.577e-10
Identity = 45/166 (27.11%), Postives = 81/166 (48.80%), Query Frame = 0

Query:   28 LQSMELLILSHLKWDLMAVTAYDYLDYLLDVLQTPSAHVGDEEVLQEPGHIESLRRQSERLITLCNTDPHFMSVTPSLVASAALTSA---MQQDLESQPPMGPTVNLNDVVQKLRKYTEIEMDSLRHCIDQIEELFISGATPRPQSPSSGPGLHKESAMDGTTTTT 190
            L   EL++L  LKW+L AVT +D+++++L  L             Q+   +  +R+ ++  I LC TD  F    PS++A+ ++ +A   +QQD E       ++  + + + L K T  ++D L+ C +QIE + ++      Q    G     E  +D  +T T
Sbjct:  136 LLEWELVVLGKLKWNLAAVTPHDFIEHILRKLP------------QQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAAICGLQQDEEV-----SSLTCDALTELLAKITNTDVDCLKACQEQIEAVLLNSLQQYRQDQRDGS--KSEDELDQASTPT 282

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BLAST of g1 s-specific cyclin- partial vs. SwissProt
Match: gi|416789|sp|Q04827.1|CCND2_RAT (RecName: Full=G1/S-specific cyclin-D2; AltName: Full=Vin-1 proto-oncogene)

HSP 1 Score: 61.2326 bits (147), Expect = 9.452e-10
Identity = 46/169 (27.22%), Postives = 82/169 (48.52%), Query Frame = 0

Query:   28 LQSMELLILSHLKWDLMAVTAYDYLDYLLDVLQTPSAHVGDEEVLQEPGHIESLRRQSERLITLCNTDPHFMSVTPSLVASAALTSA---MQQDLESQPPMGPTVNLNDVVQKLRKYTEIEMDSLRHCIDQIEELFISGATPRPQSPSSGPGLHKESAMDGTTTTTSSD 193
            L   EL++L  LKW+L AVT +D+++++L  L             Q+   +  +R+ ++  I LC TD  F    PS++A+ ++ +A   +QQD E        +  + + + L K T  ++D L+ C +QIE + ++      Q   +G     +S  D    TT +D
Sbjct:  135 LLEWELVVLGKLKWNLAAVTPHDFIEHILRKLP------------QQKEKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAAICGLQQDEEVN-----ALTCDALTELLTKITHTDVDCLKACQEQIEAVLLNSLQQFRQEQHNG----SKSVEDPDQATTPTD 282

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BLAST of g1 s-specific cyclin- partial vs. SwissProt
Match: gi|231744|sp|P30282.1|CCND3_MOUSE (RecName: Full=G1/S-specific cyclin-D3)

HSP 1 Score: 60.8474 bits (146), Expect = 1.677e-9
Identity = 47/161 (29.19%), Postives = 81/161 (50.31%), Query Frame = 0

Query:   28 LQSMELLILSHLKWDLMAVTAYDYLDYLLDVLQTPSAHVGDEEVLQEPGHIESLRRQSERLITLCNTDPHFMSVTPSLVASAALTSAMQQDLESQPPMGP-TVNLNDVVQKLRKYTEIEMDSLRHCIDQIE--------ELFISGATPRPQSP----SSGP 175
            L+  E+L+L  LKWDL AV A+D+L  +L  L  PS    D + L        +++ ++  + LC TD  F    PS++A+ ++ +A+         +G  +++ +++ + L   T  E+D LR C +QIE        E   +  +P P++P    S GP
Sbjct:  137 LREWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPS----DRQAL--------VKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVLG-------LGACSMSADELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTAPSPVPKAPRGSSSQGP 278

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BLAST of g1 s-specific cyclin- partial vs. SwissProt
Match: gi|75066003|sp|Q8WNW2.1|CCND2_PIG (RecName: Full=G1/S-specific cyclin-D2)

HSP 1 Score: 60.077 bits (144), Expect = 2.544e-9
Identity = 45/166 (27.11%), Postives = 80/166 (48.19%), Query Frame = 0

Query:   28 LQSMELLILSHLKWDLMAVTAYDYLDYLLDVLQTPSAHVGDEEVLQEPGHIESLRRQSERLITLCNTDPHFMSVTPSLVASAALTSA---MQQDLESQPPMGPTVNLNDVVQKLRKYTEIEMDSLRHCIDQIEELFISGATPRPQSPSSGPGLHKESAMDGTTTTT 190
            L   EL++L  LKW+L AVT +D+++++L  L  P+  +              +R+ ++  I LC TD  F    PS++A+ ++ +A   +QQD +     G     + +V  L + T  ++D L+ C +QIE + ++      Q      G   E  +D  +T T
Sbjct:  136 LLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQPNEKLS------------LIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAAICGLQQDEDVSSLTG-----DALVDLLARITNTDVDCLKACQEQIEVVLLNSLQ---QYRQDQDGSKSEDELDQASTPT 281

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BLAST of g1 s-specific cyclin- partial vs. SwissProt
Match: gi|3023475|sp|Q90459.1|CCND1_DANRE (RecName: Full=G1/S-specific cyclin-D1)

HSP 1 Score: 60.077 bits (144), Expect = 2.876e-9
Identity = 43/138 (31.16%), Postives = 77/138 (55.80%), Query Frame = 0

Query:   24 PFRILQSMELLILSHLKWDLMAVTAYDYLDYLLDVLQTPSAHVGDEEVLQEPGHIESLRRQSERLITLCNTDPHFMSVTPSLVASAALTSAMQ-QDLESQPPMGPTVNLNDVVQKLRKYTEIEMDSLRHCIDQIEELF 160
            P  +LQ MELL L+ LKWDL +VT +D++++ L  L     H   +++         LR+ ++  + LC TD +F++  PS++A+ ++ +A+Q   L+S      + NL + + ++ +    + D LR C +QIE L 
Sbjct:  134 PGELLQ-MELLALNKLKWDLASVTPHDFIEHFLAKL---PIHQSSKQI---------LRKHAQTFVALCATDVNFIASPPSMIAAGSVAAAVQGLYLKSTDSCLSSQNLTNFLSQVIRS---DPDCLRSCQEQIESLL 255

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BLAST of g1 s-specific cyclin- partial vs. SwissProt
Match: gi|1705784|sp|P49706.1|CCND2_CHICK (RecName: Full=G1/S-specific cyclin-D2)

HSP 1 Score: 58.151 bits (139), Expect = 1.049e-8
Identity = 44/139 (31.65%), Postives = 74/139 (53.24%), Query Frame = 0

Query:   28 LQSMELLILSHLKWDLMAVTAYDYLDYLLDVLQTPSAHVGDEEVLQEPGHIESLRRQSERLITLCNTDPHFMSVTPSLVASAALTSA---MQQDLESQPPMGPTVNLNDVVQKLRKYTEIEMDSLRHCIDQIEELFISG 163
            L   EL++L  LKW+L AVT +D+++++L  L  P     D+ VL        +R+ ++  I LC TD +F    PS++A+ ++ +A   +Q D   +   G +  L D    L K T  ++D L+ C +QIE + +S 
Sbjct:  136 LLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPLPK----DKLVL--------IRKHAQTFIALCATDFNFAMYPPSMIATGSVGAAICGLQLDDGDRSLSGDS--LTDF---LAKITSTDVDCLKACQEQIESVLVSN 257

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BLAST of g1 s-specific cyclin- partial vs. nr
Match: gi|1048420389|ref|XP_017528934.1| (PREDICTED: G1/S-specific cyclin-D3 isoform X1 [Manis javanica] >gi|1048420391|ref|XP_017528935.1| PREDICTED: G1/S-specific cyclin-D3 isoform X2 [Manis javanica] >gi|1048420393|ref|XP_017528936.1| PREDICTED: G1/S-specific cyclin-D3 isoform X2 [Manis javanica])

HSP 1 Score: 70.4774 bits (171), Expect = 4.078e-10
Identity = 51/168 (30.36%), Postives = 81/168 (48.21%), Query Frame = 0

Query:   26 RILQSMELLILSHLKWDLMAVTAYDYLDYLLDVLQTPSAHVGDEEVLQEPGHIESLRRQSERLITLCNTDPHFMSVTPSLVASAALTSAMQQDLESQPPMGPTVNLND-VVQKLRKYTEIEMDSLRHCIDQIEELFISGATPRPQ-SPSSGPGLHKESAMDGTTTTTS 191
            R L+  E+L+L  LKWDL AV A+D+L  +L  L  P     D + L        +++ ++  + LC TD  F    PS++A+ ++ +A+Q        +G      D + + L   T  E+D LR C +QIE           Q SPS GP   + S+  G + T++
Sbjct:  225 RQLRDWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPH----DRQAL--------VKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQG-------LGACSTSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSPSPGPKAPRGSSSQGPSQTST 373

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BLAST of g1 s-specific cyclin- partial vs. nr
Match: gi|410930780|ref|XP_003978776.1| (PREDICTED: G1/S-specific cyclin-D1-like [Takifugu rubripes])

HSP 1 Score: 69.707 bits (169), Expect = 5.042e-10
Identity = 47/140 (33.57%), Postives = 78/140 (55.71%), Query Frame = 0

Query:   24 PFRILQSMELLILSHLKWDLMAVTAYDYLDYLLDVLQTPSAHVGDEEVLQEPGHIES---LRRQSERLITLCNTDPHFMSVTPSLVASAALTSAMQQDLESQPPMGPTVNLNDVVQKLRKYTEIEMDSLRHCIDQIEELF 160
            P ++LQ MELL+L+ LKWDL +VTA D++D+ L                Q PG  E    LR+ ++  + LC TD  F++  PS+VA++++ +A+   L+S+   G  ++   + ++L +    + D LR C +QIE L 
Sbjct:  136 PAQLLQ-MELLVLNKLKWDLASVTALDFIDHFLR---------------QLPGMRECKLVLRKHAQTFVALCATDVKFIASPPSMVAASSMVAAV-GGLQSRLAGGCNMS-QKMTEQLAQTIRCDPDCLRACQEQIEALL 257

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BLAST of g1 s-specific cyclin- partial vs. nr
Match: gi|1048420395|ref|XP_017528937.1| (PREDICTED: G1/S-specific cyclin-D3 isoform X3 [Manis javanica])

HSP 1 Score: 69.707 bits (169), Expect = 5.360e-10
Identity = 49/165 (29.70%), Postives = 79/165 (47.88%), Query Frame = 0

Query:   29 QSMELLILSHLKWDLMAVTAYDYLDYLLDVLQTPSAHVGDEEVLQEPGHIESLRRQSERLITLCNTDPHFMSVTPSLVASAALTSAMQQDLESQPPMGPTVNLND-VVQKLRKYTEIEMDSLRHCIDQIEELFISGATPRPQ-SPSSGPGLHKESAMDGTTTTTS 191
            +  E+L+L  LKWDL AV A+D+L  +L  L  P     D + L        +++ ++  + LC TD  F    PS++A+ ++ +A+Q        +G      D + + L   T  E+D LR C +QIE           Q SPS GP   + S+  G + T++
Sbjct:  156 EDWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPH----DRQAL--------VKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQG-------LGACSTSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSPSPGPKAPRGSSSQGPSQTST 301

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BLAST of g1 s-specific cyclin- partial vs. nr
Match: gi|1207940937|ref|XP_021360132.1| (G1/S-specific cyclin-D2-like [Mizuhopecten yessoensis] >gi|1205897690|gb|OWF47133.1| G1/S-specific cyclin-D2 [Mizuhopecten yessoensis])

HSP 1 Score: 69.3218 bits (168), Expect = 5.444e-10
Identity = 44/144 (30.56%), Postives = 80/144 (55.56%), Query Frame = 0

Query:   28 LQSMELLILSHLKWDLMAVTAYDYLDYLLDVLQTPSAHVGDEEVLQEPGHIESLRRQSERLITLCNTDPHFMSVTPSLVASAALTSAMQQDLESQPPMGPTVNLN-DVVQKLRKYTEIEMDSLRHCIDQIEELFISGATPRPQS 170
            L  MEL++L+ LKWDL AVT +D+L+++L  L        D+E        E +++ ++  + LC+TD  FM   PS++A+ ++ +A    L++        +LN  ++ +L + T I++D LR C +QIE+   +  +   Q+
Sbjct:  137 LMEMELIVLNKLKWDLSAVTPHDFLEHVLSRL------CMDKE------KCELIKKHAQTFVALCSTDCKFMMYPPSMIAAGSVGAAAHGLLKTN-------DLNAQLLHRLHEITSIDVDCLRSCQEQIEQTLATNLSSMAQT 261

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BLAST of g1 s-specific cyclin- partial vs. nr
Match: gi|1016689863|ref|XP_016068263.1| (PREDICTED: G1/S-specific cyclin-D3 isoform X2 [Miniopterus natalensis])

HSP 1 Score: 68.1662 bits (165), Expect = 6.082e-10
Identity = 50/168 (29.76%), Postives = 84/168 (50.00%), Query Frame = 0

Query:   25 FRILQSMELLILSHLKWDLMAVTAYDYLDYLLDVLQTPSAHVGDEEVLQEPGHIESLRRQSERLITLCNTDPHFMSVTPSLVASAALTSAMQQDLESQPPMGPTVNLNDVVQKLRKYTEIEMDSLRHCIDQIEELFISGATPRPQ-SPSSGPGLHKESAMDGTTTTTS 191
            + +L+  E+L+L  LKWDL AV A+D+L  +L  L  PS    D + L        +++ ++  + LC TD  F    PS++A+ ++ +A+ Q L +    G     +++ + L   T  E+D LR C +QIE           Q SPS  P   + S+  G + T++
Sbjct:   62 YWMLEDWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPS----DRQAL--------VKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAV-QGLGAWSASG-----DELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSPSPAPKAPRGSSSQGPSQTST 211

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BLAST of g1 s-specific cyclin- partial vs. nr
Match: gi|584064033|ref|XP_006776398.1| (PREDICTED: G1/S-specific cyclin-D3 isoform X4 [Myotis davidii])

HSP 1 Score: 68.5514 bits (166), Expect = 6.084e-10
Identity = 51/167 (30.54%), Postives = 84/167 (50.30%), Query Frame = 0

Query:   26 RILQSMELLILSHLKWDLMAVTAYDYLDYLLDVLQTPSAHVGDEEVLQEPGHIESLRRQSERLITLCNTDPHFMSVTPSLVASAALTSAMQQDLESQPPMGPTVNLNDVVQKLRKYTEIEMDSLRHCIDQIEELFISGATPRPQ-SPSSGPGLHKESAMDGTTTTTS 191
            R ++  E+L+L  LKWDL AV A+D+L  +L  L  PS    D + L        +R+ ++  + LC TD  F    PS++A+ ++ +A+ Q L + P      + +++ + L   T  E+D LR C +QIE           Q SPS  P   + S+  G + T++
Sbjct:   79 RQMRDWEVLVLGKLKWDLAAVIAHDFLALILYRLSLPS----DRQAL--------VRKHAQTFLALCATDYTFAMYPPSMIATGSIGAAV-QGLGAWP-----ASADELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSPSPAPKAPRGSSSQGPSQTST 227

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BLAST of g1 s-specific cyclin- partial vs. nr
Match: gi|676465127|ref|XP_009057144.1| (hypothetical protein LOTGIDRAFT_190960 [Lottia gigantea] >gi|556103571|gb|ESO92223.1| hypothetical protein LOTGIDRAFT_190960 [Lottia gigantea])

HSP 1 Score: 68.9366 bits (167), Expect = 6.900e-10
Identity = 48/131 (36.64%), Postives = 72/131 (54.96%), Query Frame = 0

Query:   28 LQSMELLILSHLKWDLMAVTAYDYLDYLLDVLQTPSAHVGDEEVLQEPGHIESLRRQSERLITLCNTDPHFMSVTPSLVASAALTSAMQQDLESQPPMGPTVNLNDVVQKLRKYTEIEMDSLRHCIDQIEE 158
            L +ME  +L  LKWDL AVT +D+L  +L     P   +  E+        E L+R ++  I LC TD +FM   PS++A+ ++ +A+Q     Q P       +  +QKL + T IE+DSLR C +QIE+
Sbjct:  136 LMAMESRVLQCLKWDLSAVTPHDFLQQIL-----PRLDISLEKS-------EILKRHAQTFIALCATDCNFMLSPPSMIAAGSVGAALQG---LQSPCH-----SKFLQKLHQITGIELDSLRLCQEQIEQ 246

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BLAST of g1 s-specific cyclin- partial vs. nr
Match: gi|987970893|ref|XP_015427656.1| (PREDICTED: G1/S-specific cyclin-D3 isoform X2 [Myotis davidii])

HSP 1 Score: 68.1662 bits (165), Expect = 7.123e-10
Identity = 51/167 (30.54%), Postives = 84/167 (50.30%), Query Frame = 0

Query:   26 RILQSMELLILSHLKWDLMAVTAYDYLDYLLDVLQTPSAHVGDEEVLQEPGHIESLRRQSERLITLCNTDPHFMSVTPSLVASAALTSAMQQDLESQPPMGPTVNLNDVVQKLRKYTEIEMDSLRHCIDQIEELFISGATPRPQ-SPSSGPGLHKESAMDGTTTTTS 191
            R ++  E+L+L  LKWDL AV A+D+L  +L  L  PS    D + L        +R+ ++  + LC TD  F    PS++A+ ++ +A+ Q L + P      + +++ + L   T  E+D LR C +QIE           Q SPS  P   + S+  G + T++
Sbjct:   85 RQMRDWEVLVLGKLKWDLAAVIAHDFLALILYRLSLPS----DRQAL--------VRKHAQTFLALCATDYTFAMYPPSMIATGSIGAAV-QGLGAWP-----ASADELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSPSPAPKAPRGSSSQGPSQTST 233

[Close]

BLAST of g1 s-specific cyclin- partial vs. nr
Match: gi|507570277|ref|XP_004668748.1| (PREDICTED: G1/S-specific cyclin-D2 [Jaculus jaculus])

HSP 1 Score: 68.9366 bits (167), Expect = 7.158e-10
Identity = 48/166 (28.92%), Postives = 82/166 (49.40%), Query Frame = 0

Query:   28 LQSMELLILSHLKWDLMAVTAYDYLDYLLDVLQTPSAHVGDEEVLQEPGHIESLRRQSERLITLCNTDPHFMSVTPSLVASAALTSA---MQQDLESQPPMGPTVNLNDVVQKLRKYTEIEMDSLRHCIDQIEELFISGATPRPQSPSSGPGLHKESAMDGTTTTT 190
            L   EL++L  LKW+L AVT +D+++Y+L  L             Q+   +  +R+ ++  I LC TD  F    PS++A+ ++ +A   +QQD E       ++  + + + L K T  ++D L+ C +QIE + ++      Q P  G     E  +D  TT T
Sbjct:  135 LLEWELVVLGKLKWNLAAVTPHDFIEYILRKLP------------QQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAAICGLQQDEEVS-----SLTCDALTELLAKITHTDVDCLKACQEQIEAVLLNSLQQFRQEPREGS--KSEEELDQATTPT 281

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BLAST of g1 s-specific cyclin- partial vs. nr
Match: gi|47208111|emb|CAF90703.1| (unnamed protein product, partial [Tetraodon nigroviridis])

HSP 1 Score: 70.4774 bits (171), Expect = 7.526e-10
Identity = 46/141 (32.62%), Postives = 77/141 (54.61%), Query Frame = 0

Query:   23 NPFRILQSMELLILSHLKWDLMAVTAYDYLDYLLDVLQTPSAHVGDEEVLQEPGHIES---LRRQSERLITLCNTDPHFMSVTPSLVASAALTSAMQQDLESQPPMGPTVNLNDVVQKLRKYTEIEMDSLRHCIDQIEELF 160
             P ++LQ MELL+L+ LKWDL +VT  D++D+ L                Q PG  +S   LR+ ++  + LC TD  F++  PS+VA++++ +A+ + L+ + P G       + ++L +    + D LR C +QIE L 
Sbjct: 1123 TPAQLLQ-MELLVLNRLKWDLASVTPLDFIDHFLR---------------QLPGMRDSKLVLRKHAQTFVALCATDVKFIASPPSMVAASSMVAAV-EGLQGRLP-GERDLSQKMAEQLAQTIRCDPDCLRACREQIESLL 1245

The following BLAST results are available for this feature:

BLAST of g1 s-specific cyclin- partial vs. L. salmonis genes
BLAST of g1 s-specific cyclin- partial vs. SwissProt
BLAST of g1 s-specific cyclin- partial vs. nr

BLAST of g1 s-specific cyclin- partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2


Match Name	E-value	Identity	Description
EMLSAG00000000386	2.885e-9	31.51	supercontig:LSalAtl2s:LSalAtl2s1060:22308:23429:-1...	[more]
EMLSAG00000003477	1.715e-8	31.73	supercontig:LSalAtl2s:LSalAtl2s18:214560:217374:1 ...	[more]

BLAST of g1 s-specific cyclin- partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 15


Match Name	E-value	Identity	Description
gi\|122145325\|sp\|Q0P5D3.1\|CCND2_BOVIN	3.525e-11	28.92	RecName: Full=G1/S-specific cyclin-D2	[more]
gi\|20981685\|sp\|P30281.2\|CCND3_HUMAN	7.304e-11	29.45	RecName: Full=G1/S-specific cyclin-D3	[more]
gi\|231742\|sp\|P30280.1\|CCND2_MOUSE	2.505e-10	29.50	RecName: Full=G1/S-specific cyclin-D2	[more]
gi\|115312216\|sp\|Q3MHH5.1\|CCND3_BOVIN	7.595e-10	29.17	RecName: Full=G1/S-specific cyclin-D3	[more]
gi\|231741\|sp\|P30279.1\|CCND2_HUMAN	8.577e-10	27.11	RecName: Full=G1/S-specific cyclin-D2	[more]
gi\|416789\|sp\|Q04827.1\|CCND2_RAT	9.452e-10	27.22	RecName: Full=G1/S-specific cyclin-D2; AltName: Fu...	[more]
gi\|231744\|sp\|P30282.1\|CCND3_MOUSE	1.677e-9	29.19	RecName: Full=G1/S-specific cyclin-D3	[more]
gi\|75066003\|sp\|Q8WNW2.1\|CCND2_PIG	2.544e-9	27.11	RecName: Full=G1/S-specific cyclin-D2	[more]
gi\|3023475\|sp\|Q90459.1\|CCND1_DANRE	2.876e-9	31.16	RecName: Full=G1/S-specific cyclin-D1	[more]
gi\|1705784\|sp\|P49706.1\|CCND2_CHICK	1.049e-8	31.65	RecName: Full=G1/S-specific cyclin-D2	[more]

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BLAST of g1 s-specific cyclin- partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1048420389\|ref\|XP_017528934.1\|	4.078e-10	30.36	PREDICTED: G1/S-specific cyclin-D3 isoform X1 [Man...	[more]
gi\|410930780\|ref\|XP_003978776.1\|	5.042e-10	33.57	PREDICTED: G1/S-specific cyclin-D1-like [Takifugu ...	[more]
gi\|1048420395\|ref\|XP_017528937.1\|	5.360e-10	29.70	PREDICTED: G1/S-specific cyclin-D3 isoform X3 [Man...	[more]
gi\|1207940937\|ref\|XP_021360132.1\|	5.444e-10	30.56	G1/S-specific cyclin-D2-like [Mizuhopecten yessoen...	[more]
gi\|1016689863\|ref\|XP_016068263.1\|	6.082e-10	29.76	PREDICTED: G1/S-specific cyclin-D3 isoform X2 [Min...	[more]
gi\|584064033\|ref\|XP_006776398.1\|	6.084e-10	30.54	PREDICTED: G1/S-specific cyclin-D3 isoform X4 [Myo...	[more]
gi\|676465127\|ref\|XP_009057144.1\|	6.900e-10	36.64	hypothetical protein LOTGIDRAFT_190960 [Lottia gig...	[more]
gi\|987970893\|ref\|XP_015427656.1\|	7.123e-10	30.54	PREDICTED: G1/S-specific cyclin-D3 isoform X2 [Myo...	[more]
gi\|507570277\|ref\|XP_004668748.1\|	7.158e-10	28.92	PREDICTED: G1/S-specific cyclin-D2 [Jaculus jaculu...	[more]
gi\|47208111\|emb\|CAF90703.1\|	7.526e-10	32.62	unnamed protein product, partial [Tetraodon nigrov...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold96_size378025	supercontig	scaffold96_size378025:172297..173206 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	P:single-organism cellular process

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold96_size378025-snap-gene-1.20-mRNA-1	maker-scaffold96_size378025-snap-gene-1.20-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold96_size378025:172297..173206-

gene from alignment at scaffold96_size378025:172297..173206-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold96_size378025-snap-gene-1.20 ID=maker-scaffold96_size378025-snap-gene-1.20|Name=g1 s-specific cyclin- partial|organism=Tigriopus kingsejongensis|type=gene|length=910bp|location=Sequence derived from alignment at scaffold96_size378025:172297..173206- (Tigriopus kingsejongensis)
ATGGGAAAATCCCGGCAGATGGCCATCTCGGAAGGGGTTTCCACGCTAAT
TGCCCGCTCTGATCCCAATCCTTTTCGCATTTTGCAGTCCATGGAACTGT
TGATTCTTTCGCATCTCAAGTGGGACTTGATGGCTGTCACAGCCTACGAC
TACCTCGACTACCTCCTGGACGTGCTCCAGACTCCGTCCGCTCACGTCGG
GGACGAGGAGGTCCTTCAGGAGCCCGGCCACATCGAGTCACTCCGCCGTC
AGAGCGAGCGTTTGATCACTCTGTGCAACACCGACCCTCATTTCATGTCC
GTCACGCCTAGTCTGGTGGCCTCAGCCGCTCTCACGTCGGCCATGCAGCA
GGACCTCGAATCCCAGCCGCCCATGGGGCCCACGGTCAATCTGAACGACG
TGGTGCAGAAGCTCCGCAAGTACACGGAGATCGAGATGGTAAGCACCGAC
TCGAGGTCAGACTGGATGACTCGGCTCATTTCTCACCACTCTCTCTCTCA
CCCTCCAGGATTCGCTCCGCCACTGCATTGACCAAATTGAAGAGCTTTTC
ATCTCGGGGGCCACCCCCAGACCCCAGTCACCCAGTTCTGGACCAGGCCT
GCACAAAGAGAGCGCCATGGATGGCACCACCACCACCACCTCCTCAGACA
GTCTGTACCATTCATCCCCCAATCATCGGTGTCATGCCACAAGTCTTTCA
AGGCCATCGCCTCCTTCAACAAACCCGACGTCTGGAAATGGCGATCAGCT
GTTGATGTCCCACCACTCGGGCAGGAGCAGCTGGAGCCACTCCGCTGCCA
GCCTAGACAGCCCCCTCAACCTCGTCCCTCTGGCCACTTTTCCGCAGCTG
GACCCCAAAGATCGCCGAGGTGAAAAGGGGGAAGGCGGAGCGGCGAGAGA
ACCCCAATGA

Synonyms

The feature 'g1 s-specific cyclin- partial' has the following synonyms


Synonym
Tk04967

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