troponin c isoform 4, maker-scaffold993_size72668-snap-gene-0.14 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of troponin c isoform 4 vs. L. salmonis genes
Match: EMLSAG00000005879 (supercontig:LSalAtl2s:LSalAtl2s318:522663:523631:-1 gene:EMLSAG00000005879 transcript:EMLSAT00000005879 description:"augustus_masked-LSalAtl2s318-processed-gene-4.3") HSP 1 Score: 152.14 bits (383), Expect = 2.450e-47 Identity = 78/146 (53.42%), Postives = 106/146 (72.60%), Query Frame = 0 Query: 22 ESTGLDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDA 167 ++ GLD EQ+ LK+ F+GF ++ G I + I MMG+ V+ L + +EE+ D G +F FC ++++FLIEEDEE +++ELKEAFRIYDKEGNGYI+TE L+EIL E+D +LT +D+DGI+EEVDEDGSGTLDFD Sbjct: 11 DAMGLDTEQVHVLKRCFDGF-ADEDGAIPADNVGNILSMMGLKVKPASLKDIIEEI--DEDGSGLLEFGEFCQLSARFLIEEDEEALKKELKEAFRIYDKEGNGYISTETLREILRELDNKLTSDDIDGIIEEVDEDGSGTLDFDG 153
BLAST of troponin c isoform 4 vs. L. salmonis genes
Match: EMLSAG00000007651 (supercontig:LSalAtl2s:LSalAtl2s443:420476:476013:-1 gene:EMLSAG00000007651 transcript:EMLSAT00000007651 description:"maker-LSalAtl2s443-snap-gene-4.40") HSP 1 Score: 150.599 bits (379), Expect = 6.320e-47 Identity = 80/144 (55.56%), Postives = 104/144 (72.22%), Query Frame = 0 Query: 25 GLDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAF 168 GL+ +Q+E L K F GF +E G++ + I +MMG+ V++ L +EE D G+ +F+ FCI+A++FLIEEDEEQMR+ELKEAFR YDKEG GY+T E LK IL E++P+LTDE L IVEEVDEDGSGT+DFD F Sbjct: 14 GLEPDQVEVLMKCFNGFCQE--GVVQAETVGEILQMMGLRVKQQALQAIIEE--VDEDGSGELEFEEFCILAARFLIEEDEEQMRKELKEAFRFYDKEGVGYLTIETLKGILLELEPKLTDEQLMEIVEEVDEDGSGTIDFDEF 153
BLAST of troponin c isoform 4 vs. L. salmonis genes
Match: EMLSAG00000005578 (supercontig:LSalAtl2s:LSalAtl2s2:1932686:1933237:-1 gene:EMLSAG00000005578 transcript:EMLSAT00000005578 description:"maker-LSalAtl2s2-augustus-gene-19.6") HSP 1 Score: 137.887 bits (346), Expect = 3.500e-42 Identity = 85/143 (59.44%), Postives = 107/143 (74.83%), Query Frame = 0 Query: 24 TGLDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFD 166 TGLD Q+E+L+KAFE + + I + + I KM+GVNV K + +A+EE G D KF+ + FC +AS+F+ EED E+MREELKEAFRIYD+EGNGYITT VLKEIL EIDP LT E L+GI++EVDEDGSGT+DFD Sbjct: 2 TGLDLLQVESLQKAFEVCGQNEETIDTELLVTSI-KMLGVNVTKAGVMDAVEESG--LDPEAKFNLEQFCFIASRFINEEDVEEMREELKEAFRIYDREGNGYITTGVLKEILKEIDPSLTAEQLEGIIQEVDEDGSGTVDFD 141
BLAST of troponin c isoform 4 vs. L. salmonis genes
Match: EMLSAG00000003476 (supercontig:LSalAtl2s:LSalAtl2s18:1777138:1777861:-1 gene:EMLSAG00000003476 transcript:EMLSAT00000003476 description:"maker-LSalAtl2s18-augustus-gene-17.20") HSP 1 Score: 129.028 bits (323), Expect = 2.616e-38 Identity = 70/150 (46.67%), Postives = 99/150 (66.00%), Query Frame = 0 Query: 20 ISESTGLDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEE-DEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAF 168 ISE+T L+ ++I+ LK F FD + + + I + MG + ++ + D G+ +F FC + +KFL+EE DEE M+ ELKEAFR+YDK+G G+ITT+ L+EI+ E+DP LT EDLDGI+EE+DEDGSGT+DFD F Sbjct: 24 ISEATALETDEIKVLKLCFNLFDVRKQDFLGADDLDDILRAMGF--RPSKEELKEILEEIDEDGSGEIEFGEFCQLCAKFLVEEPDEETMKAELKEAFRVYDKDGAGFITTDQLREIIAELDPRLTGEDLDGIIEEIDEDGSGTMDFDEF 171
BLAST of troponin c isoform 4 vs. L. salmonis genes
Match: EMLSAG00000007153 (supercontig:LSalAtl2s:LSalAtl2s403:109735:110241:1 gene:EMLSAG00000007153 transcript:EMLSAT00000007153 description:"augustus_masked-LSalAtl2s403-processed-gene-1.0") HSP 1 Score: 126.716 bits (317), Expect = 1.532e-37 Identity = 70/151 (46.36%), Postives = 99/151 (65.56%), Query Frame = 0 Query: 19 TISESTGLDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEE-DEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAF 168 I + TGL+ ++I+ LK F FD + +S + I + MG + ++ + D G+ +F+ FC + +KFLIEE DEE M+ ELKEAFR+YDKE NG+ITT+ L+EI+ E+D LT +DLDGI+EE+DEDGSGT+DFD F Sbjct: 14 AIKDVTGLETDEIKVLKICFNMFDVKDQAFLSADDLDDILRGMGF--RPSKEELKEILEEIDEDGSGEIEFEEFCQLCAKFLIEEPDEETMKAELKEAFRVYDKEANGFITTDQLREIISELDQRLTVDDLDGIIEEIDEDGSGTMDFDEF 162
BLAST of troponin c isoform 4 vs. L. salmonis genes
Match: EMLSAG00000008774 (supercontig:LSalAtl2s:LSalAtl2s545:134602:142913:1 gene:EMLSAG00000008774 transcript:EMLSAT00000008774 description:"augustus_masked-LSalAtl2s545-processed-gene-1.3") HSP 1 Score: 80.4925 bits (197), Expect = 1.705e-19 Identity = 46/144 (31.94%), Postives = 81/144 (56.25%), Query Frame = 0 Query: 26 LDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAFR 169 L ++++A K AF+ FDK Q G IS + + G N + ++ + + E+ D G +F FC++ K L + D+E ELKE FR++ K+ G IT E LK +L + ++T +++D ++ VD++G G +++ FR Sbjct: 5 LRPDELQAFKAAFDMFDKNQDGTISTKELHAAMRRAGQNPTEAEVQDMINEVDV--DGSGYLEFPEFCMMMHKKLNDGDQEN---ELKEVFRVFGKDETGCITAEELKFVLTHLPGKVTYKEIDEMIRTVDQNGDGKINYQEFR 143
BLAST of troponin c isoform 4 vs. L. salmonis genes
Match: EMLSAG00000006985 (supercontig:LSalAtl2s:LSalAtl2s397:377196:491552:1 gene:EMLSAG00000006985 transcript:EMLSAT00000006985 description:"maker-LSalAtl2s397-snap-gene-5.15") HSP 1 Score: 75.0998 bits (183), Expect = 1.098e-17 Identity = 44/149 (29.53%), Postives = 83/149 (55.70%), Query Frame = 0 Query: 26 LDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAFRRRQSR 174 L +EQI K+AF FDK+ G I+ + + + +G N + +L E + E+ AD G +F+ F + +K + + + ++KEAFR++D++G+GYI+ E +++ + L+ E++D ++ E D DG G + ++ F S Sbjct: 6 LTEEQIAEFKEAFLLFDKDGDGTITTKELATVMRSLGQNPTEAELQEMINEV--DADGNGSIEFEEFLAMMAKKV---KDNESSSDIKEAFRVFDRDGDGYISAEEXHQVMSTLGENLSSEEIDEMIREADLDGDGKVCYEEFATMMSH 149
BLAST of troponin c isoform 4 vs. L. salmonis genes
Match: EMLSAG00000007325 (supercontig:LSalAtl2s:LSalAtl2s412:129788:148284:-1 gene:EMLSAG00000007325 transcript:EMLSAT00000007325 description:"maker-LSalAtl2s412-augustus-gene-1.21") HSP 1 Score: 74.7146 bits (182), Expect = 1.279e-17 Identity = 47/144 (32.64%), Postives = 82/144 (56.94%), Query Frame = 0 Query: 26 LDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFC-IVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAF 168 L +EQ+ L++AF FD + SG I+ + + MG+N + +L E + E T D G+ +F FC ++A K DEE +R AFR+ D++G+G IT+ + ++ I +L+ +++ ++ E D+DG G LD++ F Sbjct: 6 LTREQVAELREAFNEFDDDGSGTITTQELGYAMRAMGMNPTEQELLELINEFDT--DGSGQIEFPEFCNMMAMKTGQANDEEMVRM----AFRVLDRDGSGTITSAEFRHLMTNIGDKLSATEVEMLIGEADKDGDGHLDYEEF 143
BLAST of troponin c isoform 4 vs. L. salmonis genes
Match: EMLSAG00000002767 (supercontig:LSalAtl2s:LSalAtl2s15:378667:382347:1 gene:EMLSAG00000002767 transcript:EMLSAT00000002767 description:"maker-LSalAtl2s15-augustus-gene-3.6") HSP 1 Score: 72.0182 bits (175), Expect = 2.764e-16 Identity = 46/162 (28.40%), Postives = 82/162 (50.62%), Query Frame = 0 Query: 26 LDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADE-------------------GGKFDFQSF-CIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDA 167 L +EQI K+AF FDK+ G I+ + + + +G N + +L + + E+ + G DF F ++A K EE++RE AFR++DK+GNG+I+ L+ ++ + +LTDE++D ++ E D DG G ++++ Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGEXPFPRQSPPMLYHSLSLYLCNGTIDFPEFLTMMAXKMKXTXSEEEIRE----AFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEG 161
BLAST of troponin c isoform 4 vs. L. salmonis genes
Match: EMLSAG00000001152 (supercontig:LSalAtl2s:LSalAtl2s1190:33089:45311:1 gene:EMLSAG00000001152 transcript:EMLSAT00000001152 description:"maker-LSalAtl2s1190-augustus-gene-0.25") HSP 1 Score: 69.3218 bits (168), Expect = 1.368e-15 Identity = 46/137 (33.58%), Postives = 76/137 (55.47%), Query Frame = 0 Query: 34 LKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAFRR 170 K+AF+ FDK+ SG IS + ++ + +G N ++++ E + E D G DF F + K E D+ E+L+EAFRI+DK +GYI + + + + LT E+L+ ++E D DG G LD++ F + Sbjct: 12 FKEAFDEFDKDGSGTISTKELLLVMRSIGQNPTEDEILEMVMESDLNGD--GTIDFLEFVEMMKKKSSETDQ---TEDLREAFRIFDKNKSGYIEAKEIISVTTTMGQVLTPEELETFMQEADLDGDGKLDYNEFVK 143
BLAST of troponin c isoform 4 vs. SwissProt
Match: gi|136030|sp|P21797.1|TNNC1_BALNU (RecName: Full=Troponin C, isoform 1) HSP 1 Score: 162.54 bits (410), Expect = 2.888e-50 Identity = 83/148 (56.08%), Postives = 109/148 (73.65%), Query Frame = 0 Query: 21 SESTGLDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAF 168 +E TGL+KEQI L++AF+ FD+++ G IS + I +MMG+ V + +EE+ D G+ +F F +A+KFLIEEDEE M +ELKEAFR+YDKEGNGYITT+ LKEILHE+D LT E+L GI+EE+DEDGSGT+DFD F Sbjct: 7 AEETGLEKEQIVVLRRAFDSFDRDKKGYISPETVSDILRMMGIKVSSTSFKQIIEEI--DEDGSGQIEFSEFLQLAAKFLIEEDEEAMMKELKEAFRLYDKEGNGYITTQTLKEILHELDARLTAEELVGIIEEIDEDGSGTVDFDEF 152
BLAST of troponin c isoform 4 vs. SwissProt
Match: gi|136034|sp|P29290.1|TNNCA_HOMAM (RecName: Full=Troponin C, isoform 2A) HSP 1 Score: 151.754 bits (382), Expect = 3.838e-46 Identity = 83/143 (58.04%), Postives = 108/143 (75.52%), Query Frame = 0 Query: 26 LDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAF 168 LD+EQI AL+KAF+ FD + G I+ + +I +MMGV + + L E + E T D G+ +F+ F +A+KFLIEEDEE ++ EL+EAFR+YDKEGNGYITT+VLKEIL E+D LT+EDLD I+EEVDEDGSGTLDF+ F Sbjct: 4 LDEEQIGALQKAFDSFDTDSKGFITPETVGVILRMMGVKISEKNLQEVIAE--TDEDGSGELEFEEFVELAAKFLIEEDEEALKTELREAFRVYDKEGNGYITTDVLKEILRELDNRLTEEDLDSIIEEVDEDGSGTLDFNEF 144
BLAST of troponin c isoform 4 vs. SwissProt
Match: gi|136032|sp|P06708.1|TNNC2_ASTLP (RecName: Full=Troponin C, isotype gamma) HSP 1 Score: 150.984 bits (380), Expect = 9.581e-46 Identity = 83/148 (56.08%), Postives = 109/148 (73.65%), Query Frame = 0 Query: 26 LDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAFRRRQS 173 LD+EQ+ ALKKAF+ FD + G I+ + +I +MMGV + + L + + E T D G+ +F+ F +A+KFLIEEDEE ++ ELKEAFRIYDK G+GYITT+VL+EIL E+D LT++DLDGI+EEVDEDGSGTLDFD F S Sbjct: 4 LDEEQLSALKKAFDSFDTDSKGFITPETVGVILRMMGVKISEKNLQQVIAE--TDEDGSGELEFEEFVELAAKFLIEEDEEALKAELKEAFRIYDKGGDGYITTDVLREILRELDNRLTEDDLDGIIEEVDEDGSGTLDFDEFMEMMS 149
BLAST of troponin c isoform 4 vs. SwissProt
Match: gi|136031|sp|P29289.1|TNNC1_HOMAM (RecName: Full=Troponin C, isoform 1) HSP 1 Score: 149.828 bits (377), Expect = 2.290e-45 Identity = 75/145 (51.72%), Postives = 105/145 (72.41%), Query Frame = 0 Query: 26 LDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAFRR 170 LD++Q++AL+KAF FD + G I+ + +I +MMGV + L E + E T D G+ +F+ F +A+KFL EEDEE +++ELKEAFRIYD+ GNGYIT LKEIL E+D +LT+++LD I+EEVDEDGSGT+DF+ F + Sbjct: 4 LDEDQVQALQKAFNSFDTDDKGFITPDTVGVILRMMGVKISDRHLQEVISE--TDEDGSGEIEFEEFAALAAKFLSEEDEEALKKELKEAFRIYDRGGNGYITVHTLKEILRELDNKLTEDNLDSIIEEVDEDGSGTIDFNEFMK 146
BLAST of troponin c isoform 4 vs. SwissProt
Match: gi|136035|sp|P29291.1|TNNCB_HOMAM (RecName: Full=Troponin C, isoform 2B) HSP 1 Score: 149.058 bits (375), Expect = 5.906e-45 Identity = 80/143 (55.94%), Postives = 106/143 (74.13%), Query Frame = 0 Query: 26 LDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAF 168 LD EQ+ AL+KAF+ FD + G I+ + +I +MMGV + + L E + E T D G+ +F+ F +A+KFLIEEDEE ++ EL+EAFR+YD+ GNGYITT+VLKEIL E+D LT+EDLD I+EEVDEDGSGTLDF+ F Sbjct: 4 LDAEQLSALQKAFDSFDTDSKGFITPETVGVILRMMGVKISEKNLQEVISE--TDEDGSGELEFEEFVELAAKFLIEEDEEALKAELREAFRVYDRGGNGYITTDVLKEILRELDNRLTEEDLDSIIEEVDEDGSGTLDFNEF 144
BLAST of troponin c isoform 4 vs. SwissProt
Match: gi|136033|sp|P21798.2|TNNC2_BALNU (RecName: Full=Troponin C, isoform 2) HSP 1 Score: 138.658 bits (348), Expect = 5.735e-41 Identity = 73/143 (51.05%), Postives = 96/143 (67.13%), Query Frame = 0 Query: 26 LDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAF 168 LDK+QI LKKAF+GFD E+ G I+ + I +MMG L E ++E+ AD G +F+ F +A+KF+I++D E M +ELKEAFR+YDK G GYI T LK+IL E+D L EDLD I+ E+D DGSGT+DFD F Sbjct: 5 LDKDQIAMLKKAFDGFDHEKKGAINCDVVATILRMMGQAYNAQTLKELIDEV--DADGSGMLEFEEFVTLAAKFIIDDDAEAMAKELKEAFRLYDKAGKGYIPTSALKDILKELDETLNAEDLDNIIGEIDTDGSGTVDFDEF 145
BLAST of troponin c isoform 4 vs. SwissProt
Match: gi|19860033|sp|P47947.2|TNNC1_DROME (RecName: Full=Troponin C, isoform 1) HSP 1 Score: 137.502 bits (345), Expect = 1.801e-40 Identity = 75/146 (51.37%), Postives = 102/146 (69.86%), Query Frame = 0 Query: 26 LDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEA-LEEMGTTADE--GGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAF 168 L KEQ L+ AF FD E++G I+ + I M+G +QLD+A L ++ DE G+ +F+ F +A++FL+EED E M ELKEAFR+YDKEGNGYITT VL+EIL E+D +LT++DLD ++EE+D DGSGT+DFD F Sbjct: 5 LTKEQTALLRNAFNAFDPEKNGYINTAMVGTILSMLG-----HQLDDATLADIIAEVDEDGSGQIEFEEFTTLAARFLVEEDAEAMMAELKEAFRLYDKEGNGYITTGVLREILRELDDKLTNDDLDMMIEEIDSDGSGTVDFDEF 145 HSP 2 Score: 52.373 bits (124), Expect = 9.650e-8 Identity = 27/64 (42.19%), Postives = 38/64 (59.38%), Query Frame = 0 Query: 112 LKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAFRRRQSRL 175 L+ AF +D E NGYI T ++ IL + +L D L I+ EVDEDGSG ++F+ F +R Sbjct: 13 LRNAFNAFDPEKNGYINTAMVGTILSMLGHQLDDATLADIIAEVDEDGSGQIEFEEFTTLAARF 76
BLAST of troponin c isoform 4 vs. SwissProt
Match: gi|68068004|sp|P47948.2|TNNC2_DROME (RecName: Full=Troponin C, isoform 2) HSP 1 Score: 136.732 bits (343), Expect = 3.523e-40 Identity = 69/143 (48.25%), Postives = 103/143 (72.03%), Query Frame = 0 Query: 26 LDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAF 168 L EQI L+KAF FD +++G I + I ++MG + LDE ++E+ D+ G+ +F+ F +A+KF++EED+E M++EL+EAFR+YDK+GNGYI T LKEIL E+D +LT+++LD ++EE+D DGSGT+DFD F Sbjct: 8 LTPEQIAVLQKAFNSFDHQKTGSIPTEMVADILRLMGQPFDRQILDELIDEVD--EDKSGRLEFEEFVQLAAKFIVEEDDEAMQKELREAFRLYDKQGNGYIPTSCLKEILKELDDQLTEQELDIMIEEIDSDGSGTVDFDEF 148
BLAST of troponin c isoform 4 vs. SwissProt
Match: gi|14286181|sp|P47949.2|TNNC3_DROME (RecName: Full=Troponin C, isoform 3) HSP 1 Score: 133.65 bits (335), Expect = 7.619e-39 Identity = 69/143 (48.25%), Postives = 101/143 (70.63%), Query Frame = 0 Query: 26 LDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAF 168 L EQI L+KAF FD +++G I + I ++MG K L+E +EE+ D+ G+ +F F +A+KF++EED E M++EL+EAFR+YDK+GNG+I T LKEIL E+D +LT+++LD ++EE+D DGSGT+DFD F Sbjct: 8 LTPEQIAVLQKAFNSFDHQKTGSIPTEMVADILRLMGQPFDKKILEELIEEVD--EDKSGRLEFGEFVQLAAKFIVEEDAEAMQKELREAFRLYDKQGNGFIPTTCLKEILKELDDQLTEQELDIMIEEIDSDGSGTVDFDEF 148
BLAST of troponin c isoform 4 vs. SwissProt
Match: gi|136029|sp|P06707.1|TNNC1_ASTLP (RecName: Full=Troponin C, isotype alpha) HSP 1 Score: 127.872 bits (320), Expect = 9.481e-37 Identity = 74/145 (51.03%), Postives = 107/145 (73.79%), Query Frame = 0 Query: 26 LDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAFRR 170 LD+EQ+ AL+KAF+ FD + G I+ + +I +MMGV + + L + + E T D G+ +F+ F +A+KFL EEDEE +++ELKEAFRIYD+ G+GYITT+VL+EIL E+D LT+++LD I+EE+DEDGSGT+DF F + Sbjct: 4 LDEEQVSALQKAFDSFDTDSKGFITPETVGIILRMMGVKISERHLQQVISE--TDEDGSGEIEFEEFAELAAKFLSEEDEEALKKELKEAFRIYDRGGDGYITTQVLREILKELDNRLTEDNLDEIIEEIDEDGSGTIDFMEFMK 146
BLAST of troponin c isoform 4 vs. nr
Match: gi|239949539|gb|ACS36544.1| (troponin C isoform 4' [Homarus americanus]) HSP 1 Score: 171.014 bits (432), Expect = 4.344e-51 Identity = 84/144 (58.33%), Postives = 111/144 (77.08%), Query Frame = 0 Query: 25 GLDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAF 168 GLDK Q+E L+KAF+ FD ++ G IS + I +MMGV + + L E + E+ D+ G+ +F+ FC +A+KFLIEEDEE ++ ELKEAFRIYDK+G+GYITT+ LKEIL E+D +LT+EDLDGI++EVDEDGSGTLDFD F Sbjct: 8 GLDKVQVEGLRKAFDAFDTDKKGAISTDTVSTILRMMGVKISEKNLQEVISEV--DEDDSGELEFEEFCALAAKFLIEEDEESLKTELKEAFRIYDKQGDGYITTQTLKEILRELDNKLTEEDLDGIIDEVDEDGSGTLDFDEF 149
BLAST of troponin c isoform 4 vs. nr
Match: gi|1151052840|gb|AQV08182.1| (troponin C [Palaemon carinicauda]) HSP 1 Score: 163.696 bits (413), Expect = 2.343e-48 Identity = 85/148 (57.43%), Postives = 110/148 (74.32%), Query Frame = 0 Query: 26 LDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAFRRRQS 173 L+++QIEAL+KAF+ FD E+ G I+ + I +MMGV + + L E + E T D G+ +F+ F +A+KFLIEEDEE ++ EL+EAFRIYDKEG G+ITT+VL+EIL EID +LT EDLDGI+EEVDEDGSGTLDFD F S Sbjct: 4 LEEDQIEALRKAFDSFDTEKQGFITADTIATILRMMGVKISEKNLAEVIAE--TDEDGSGQLEFEEFVDLAAKFLIEEDEEALKAELREAFRIYDKEGQGFITTDVLREILSEIDNKLTPEDLDGIIEEVDEDGSGTLDFDEFMEMMS 149
BLAST of troponin c isoform 4 vs. nr
Match: gi|238477333|gb|ACR43478.1| (troponin C [Crangon crangon]) HSP 1 Score: 163.31 bits (412), Expect = 3.955e-48 Identity = 86/148 (58.11%), Postives = 107/148 (72.30%), Query Frame = 0 Query: 26 LDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAFRRRQS 173 L+ +QI+ALKKAF+ FD E G I+ + I +MMGV + L E + E T D G+ +F+ F ++SKFLIEEDEE ++ EL+EAFRIYDKEG G+ITT+VLKEIL EID +LT EDLDGI+EEVDEDGSGTLDFD F S Sbjct: 4 LEPDQIDALKKAFDSFDTENQGFITADTVATILRMMGVKISDKNLAEVIAE--TDEDGSGQLEFEEFVDLSSKFLIEEDEEALKAELREAFRIYDKEGQGFITTDVLKEILTEIDNKLTPEDLDGIIEEVDEDGSGTLDFDEFMEMMS 149
BLAST of troponin c isoform 4 vs. nr
Match: gi|136030|sp|P21797.1|TNNC1_BALNU (RecName: Full=Troponin C, isoform 1) HSP 1 Score: 162.54 bits (410), Expect = 8.953e-48 Identity = 83/148 (56.08%), Postives = 109/148 (73.65%), Query Frame = 0 Query: 21 SESTGLDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAF 168 +E TGL+KEQI L++AF+ FD+++ G IS + I +MMG+ V + +EE+ D G+ +F F +A+KFLIEEDEE M +ELKEAFR+YDKEGNGYITT+ LKEILHE+D LT E+L GI+EE+DEDGSGT+DFD F Sbjct: 7 AEETGLEKEQIVVLRRAFDSFDRDKKGYISPETVSDILRMMGIKVSSTSFKQIIEEI--DEDGSGQIEFSEFLQLAAKFLIEEDEEAMMKELKEAFRLYDKEGNGYITTQTLKEILHELDARLTAEELVGIIEEIDEDGSGTVDFDEF 152
BLAST of troponin c isoform 4 vs. nr
Match: gi|356713486|gb|AET36897.1| (troponin C2 [Litopenaeus vannamei]) HSP 1 Score: 162.54 bits (410), Expect = 8.994e-48 Identity = 83/143 (58.04%), Postives = 108/143 (75.52%), Query Frame = 0 Query: 26 LDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAF 168 LDK QI L+KAF+ FD ++ G I+ + I +MMGV V + L E + E+ D G+ +F+ FC +A+KFLIEEDEE ++ ELKEAFRIYDK+G+GYITT+VLKEIL E+D +L +EDLDGI++EVDEDGSGTLDFD F Sbjct: 9 LDKGQIXGLRKAFDAFDTDKKGAINVETISTILRMMGVKVSEKNLQEIIAEV--DEDGSGELEFEEFCALAAKFLIEEDEESLKAELKEAFRIYDKQGDGYITTKVLKEILRELDNKLXEEDLDGIIDEVDEDGSGTLDFDEF 149
BLAST of troponin c isoform 4 vs. nr
Match: gi|356713484|gb|AET36896.1| (troponin C1 [Litopenaeus vannamei]) HSP 1 Score: 160.229 bits (404), Expect = 7.193e-47 Identity = 84/148 (56.76%), Postives = 107/148 (72.30%), Query Frame = 0 Query: 26 LDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAFRRRQS 173 LD+EQI+ L+KAF FD E +G I+ + +I +MMGV + + L E + E T D G +F+ F +A+KFLIEEDEE ++ EL+EAFRIYDK+ GYITT+VLKEIL E+DP+LT DLDGI+EEVDEDGSGTLDFD F S Sbjct: 4 LDEEQIDTLRKAFNSFDTEGAGSINAETVGVILRMMGVKISEKNLQEVIAE--TDEDGSGMLEFEEFAELAAKFLIEEDEEALKAELREAFRIYDKDCQGYITTDVLKEILVELDPKLTPTDLDGIIEEVDEDGSGTLDFDEFMEMMS 149
BLAST of troponin c isoform 4 vs. nr
Match: gi|1325324438|ref|XP_023344064.1| (troponin C-like [Eurytemora affinis]) HSP 1 Score: 159.844 bits (403), Expect = 1.318e-46 Identity = 80/147 (54.42%), Postives = 109/147 (74.15%), Query Frame = 0 Query: 22 ESTGLDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAF 168 E GLDKEQ+ LKKAF+ FD E+ G I+ I +MMG+ V L +E++ D G+ +F+ F +++++FL+EEDEE +++ELK+AFRIYDKE NGYITT LKEILHE+DP+LT E+L+GI+EE+DEDGSGT+DFD F Sbjct: 10 EDVGLDKEQVLTLKKAFDAFDHEKKGAITTETTGTILRMMGLKVSHEGLKAIVEDI--DEDGSGQLEFEEFVMLSARFLVEEDEEALKKELKDAFRIYDKERNGYITTGTLKEILHELDPKLTQEELNGIIEEIDEDGSGTVDFDEF 154
BLAST of troponin c isoform 4 vs. nr
Match: gi|317383200|gb|ADV17344.1| (troponin C [Penaeus monodon]) HSP 1 Score: 158.688 bits (400), Expect = 2.260e-46 Identity = 83/148 (56.08%), Postives = 107/148 (72.30%), Query Frame = 0 Query: 26 LDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAFRRRQS 173 LD+EQIE L+KAF FD E +G I+ + +I +MMGV + + L E + E T D G +F+ F +A+KFLIEEDEE ++ EL+EAFRIYDK+ GYITT++LKEIL E+DP+LT DL+GI+EEVDEDGSGTLDFD F S Sbjct: 4 LDEEQIETLRKAFNSFDTEGAGSINAETVGVILRMMGVKISEKNLQEVIAE--TDEDGSGMLEFEEFAELAAKFLIEEDEEALKAELREAFRIYDKDCQGYITTDILKEILVELDPKLTPTDLEGIIEEVDEDGSGTLDFDEFMEMMS 149
BLAST of troponin c isoform 4 vs. nr
Match: gi|298106306|gb|ADI56266.1| (troponin C isoform 3 [Homarus americanus]) HSP 1 Score: 155.992 bits (393), Expect = 2.513e-45 Identity = 83/148 (56.08%), Postives = 105/148 (70.95%), Query Frame = 0 Query: 26 LDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAFRRRQS 173 L+ +QIEAL+KAF+ FD + G I+ + I +MMGV + + L E + E T D G+ F+ F +A+KFLIEEDEE + ELKEAFR+YDK G+GYITT+VLKEIL E+D LT+EDLD I+EEVDEDGSGTLDFD F S Sbjct: 4 LEADQIEALQKAFDSFDTDGKGAITTDTVSTILRMMGVKISEKNLQEVIAE--TDEDGSGELKFEEFVELAAKFLIEEDEEALNTELKEAFRLYDKGGDGYITTDVLKEILRELDNRLTEEDLDNIIEEVDEDGSGTLDFDEFMEMMS 149
BLAST of troponin c isoform 4 vs. nr
Match: gi|501297200|dbj|BAN21108.1| (troponin C [Riptortus pedestris]) HSP 1 Score: 156.377 bits (394), Expect = 2.537e-45 Identity = 78/143 (54.55%), Postives = 107/143 (74.83%), Query Frame = 0 Query: 26 LDKEQIEALKKAFEGFDKEQSGIISGTAMQMIFKMMGVNVQKNQLDEALEEMGTTADEGGKFDFQSFCIVASKFLIEEDEEQMREELKEAFRIYDKEGNGYITTEVLKEILHEIDPELTDEDLDGIVEEVDEDGSGTLDFDAF 168 L EQI LKKAF+ FD+++SG I + I ++MG K LDE +EE+ AD+ G+ +F+ F +A+KF++EED+E M++EL+EAFR+YDKEGNGYI T LKEILHE+D +LT+E+LD I+EE+D DGSGT+DFD F Sbjct: 4 LPPEQISVLKKAFDAFDRDKSGSIPTDMVADILRLMGQPFNKKTLDELIEEVD--ADKSGRLEFEEFITLAAKFIVEEDDEAMQKELREAFRLYDKEGNGYIPTSCLKEILHELDEQLTNEELDMIIEEIDSDGSGTVDFDEF 144 The following BLAST results are available for this feature:
BLAST of troponin c isoform 4 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 20
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BLAST of troponin c isoform 4 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of troponin c isoform 4 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold993_size72668:38260..42333+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold993_size72668-snap-gene-0.14 ID=maker-scaffold993_size72668-snap-gene-0.14|Name=troponin c isoform 4|organism=Tigriopus kingsejongensis|type=gene|length=4074bp|location=Sequence derived from alignment at scaffold993_size72668:38260..42333+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'troponin c isoform 4' has the following synonyms
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