predicted protein, maker-scaffold993_size72668-snap-gene-0.16 (gene) Tigriopus kingsejongensis

Overview
Namepredicted protein
Unique Namemaker-scaffold993_size72668-snap-gene-0.16
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of predicted protein vs. L. salmonis genes
Match: EMLSAG00000001288 (supercontig:LSalAtl2s:LSalAtl2s1214:28727:33366:1 gene:EMLSAG00000001288 transcript:EMLSAT00000001288 description:"maker-LSalAtl2s1214-snap-gene-0.50")

HSP 1 Score: 89.7373 bits (221), Expect = 4.751e-25
Identity = 42/78 (53.85%), Postives = 60/78 (76.92%), Query Frame = 0 
Query:   44 ILSMILMVVAIGSLIEAYRISQLSDQSYPWSPCNSFEATKKNCPLGQACLKLKAYKS-YAWNWAMRCQSREEYIQRVE 120
            ++  IL+++      +AY++    D SYPW+ C+ FEA+KKNCP+G+ACLKLK++ + YAWNWAMRCQSREEYIQ+ +
Sbjct:    5 LIGSILILLGFVLSTQAYQLIAQYD-SYPWTKCSPFEASKKNCPVGEACLKLKSFSTGYAWNWAMRCQSREEYIQQED 81
The following BLAST results are available for this feature:
BLAST of predicted protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000012884.751e-2553.85supercontig:LSalAtl2s:LSalAtl2s1214:28727:33366:1 ... [more]
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BLAST of predicted protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of predicted protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold993_size72668supercontigscaffold993_size72668:56412..57348 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteP:transcription from RNA polymerase II promoter
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold993_size72668-snap-gene-0.16-mRNA-1maker-scaffold993_size72668-snap-gene-0.16-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold993_size72668:56412..57348+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold993_size72668-snap-gene-0.16 ID=maker-scaffold993_size72668-snap-gene-0.16|Name=predicted protein|organism=Tigriopus kingsejongensis|type=gene|length=937bp|location=Sequence derived from alignment at scaffold993_size72668:56412..57348+ (Tigriopus kingsejongensis)
CTGGATACGCGAGTCCAGTCAGTACGTGTGTGCTTGGGCCGTACACAGAA
GGAAGGGCCATACCAACGTAAGATTGGCTTTTTACCTGGATGTTGTCTTA
AAACGGCAACAATGGATCTGTTCCCACGTATCCTCTCCATGATCCTGATG
GTGGTGGCCATTGGATCACTCATCGAAGGTAGGATTTCCAGAAAAGTGGT
GTCCTCCTTGCCCAGGACATACTACTATCCCTGTGTTAAAGGCCTGTGAT
TGGATTCACAAACGGGCACCTAATCCCTTCCTTACTTGACAGCCTATCGG
ATCTCACAACTGAGCGACCAATCCTATCCGTGGAGTCCGTGCAATTCGTT
TGAGGCCACCAAAAAGAACTGTCCCTTGGGCCAAGCATGTCTCAAGCTGA
AAGCCTACAAATCCTACGCGTGGAATTGGGCCATGAGATGTAAGTGGAAC
TGGCCCCATTGGGCTCACTTGAATCGCTGCATTGAACGAGGCACTGAGGG
GGGAGGATTTGCCCTCAGATTGTGTGAACTTATGTGTGTCCCTGAGTCCA
AAGCACCAATTAATGGGACATCTTAAAAAACTACAACGTCGCAGAAATTC
ACCGGGCTCTTTTTGTACATTTGACCAGCTTCTTAGTGAGAATTAATTAT
TGAGCCTGGAGGCGTGATGATGCTGCACTATACAGTCACTGAGTTTCTGC
CCCATTTTCAGGTCAAAGCCGTGAGGAGTATATCCAACGTGTGGAATATT
CCTATGGTTTGAACAAATGATCCGCTTGGACCTCATACCAAACCCGTGCT
CTCCCAAATCGATGAAATTATGGTGATGATTTAGTCCAGCTCTTCAATGG
AGTCGAAGAATATATCAACATATGCCACCTAACCCAACAAGATTTTTATA
CTTGTATTGACAGAAAGAATACAAGATTTTCCATTTA
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Synonyms
The feature 'predicted protein' has the following synonyms
Synonym
Tk11413
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