selenocysteine-specific elongation factor, maker-scaffold995_size72343-snap-gene-0.24 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of selenocysteine-specific elongation factor vs. L. salmonis genes
Match: EMLSAG00000000120 (supercontig:LSalAtl2s:LSalAtl2s101:506260:508148:-1 gene:EMLSAG00000000120 transcript:EMLSAT00000000120 description:"maker-LSalAtl2s101-snap-gene-5.37") HSP 1 Score: 576.63 bits (1485), Expect = 0.000e+0 Identity = 306/554 (55.23%), Postives = 393/554 (70.94%), Query Frame = 0 Query: 1 MSQVLNYNVGVLGHVDSGKTSLAKALSTVSSTASFDKNPQSQARGITLDLGFSSFRVRPLPAQLAGSGASELQYTLVDCPGHASLIKTIIGGAQIIDMMMLVIDVNKGIQTQTAECLVIGEITCPKMLIVLNKVDLIDPGQRTAAVDKMKKRLKAALARTKFADAPMVAVSANPESSQEPVGVAELIEQLNAMTTMPVRNVNGPFLFSVDHCFGIRGQGTVMTGTVLQGQIHVNENVEIVTIGESRKVKSMQMFKQPVTAAQQGDRVGICVAQFDAKLLERGLVAAPGHVPWIFGAIISLKPITYFKGGIASKAKFHISLGHETVLAKITLF----EALTLEGGHARDGFNFEHDY-SYLDEIGE-DQKESVPKP--LYALLEFEKSLPVVPDCKVLGSKLDINSNSPSCRLAFHGQLLERFQDKAYVSKDLVRLKIFKEKKKEGVVERASNACEVICKSMFKKETNLSLFSGLKVLFSTGETGQIEDSFGQSGKFKVRIPDGLQASTLEQLEARSKKSKKDSSSAPTTGALDPIHISLSFKKYIFS--KKMAQ 544 M+ +LN NVGVLGHVDSGKTSLAKALST+SSTA+FDKNPQS+ RGITLDLGFSSF V P S LQ+TLVDCPGHASLI+TIIGGAQI+D+MMLV+D+ KGIQTQTAECLVIGEITC +++VLNK+D I +R++++DKM KRL+ L TKF DA +V VSA P ++ P+G+++LIE L ++ +P R+ G FLFSVDHCF IRGQGTVMTGTVLQG + +N+NVEI TI ESRKVK +QMFK+PV A QGDR+GIC LLERG V+ P VP ++ I+ L I Y+K I +K+KFH LGHETVL +IT+F E +L+ D F F Y S DE E D + +P P Y L EFE+ + +VP +VLG+KLD + ++ CRLAFHG+++ + DK Y++ +L +LK++K K KEG+V+R +N EVIC++MFKKETN++ F GL+V S+GE G+IE SFGQSGKFKV + D L + E L+ + KKS DS+ I + L FK+Y+F KKM Q Sbjct: 1 MTGILNLNVGVLGHVDSGKTSLAKALSTISSTAAFDKNPQSKERGITLDLGFSSFSV---PNHHLNDYDS-LQFTLVDCPGHASLIRTIIGGAQILDLMMLVVDIQKGIQTQTAECLVIGEITCDTLIVVLNKIDTIASEKRSSSIDKMTKRLRLTLQNTKFKDASIVPVSAFPGENEPPLGISDLIETLKKVSFIPKRDPTGSFLFSVDHCFSIRGQGTVMTGTVLQGTVRLNDNVEISTIKESRKVKGIQMFKKPVEKASQGDRIGIC-------LLERGXVSTPKTVPIVYAVILQLNKIAYYKSDICTKSKFHFCLGHETVLGRITVFGNDKEEFSLD-----DEFRFMEKYRSPTDEASENDNSDGLPAPSKQYVLCEFERPISIVPGSQVLGTKLDTDIHANMCRLAFHGKIIVHYYDKGYLTSELPQLKVYKNKTKEGIVDRMNNDFEVICRNMFKKETNMNSFLGLEVRLSSGEKGKIESSFGQSGKFKVNLNDSLSMTAKELLDKKKKKSNNDSTL---------ISVYLDFKRYVFDPKKKMIQ 529
BLAST of selenocysteine-specific elongation factor vs. L. salmonis genes
Match: EMLSAG00000010619 (supercontig:LSalAtl2s:LSalAtl2s705:336281:337543:-1 gene:EMLSAG00000010619 transcript:EMLSAT00000010619 description:"augustus_masked-LSalAtl2s705-processed-gene-3.6") HSP 1 Score: 122.094 bits (305), Expect = 2.423e-30 Identity = 83/300 (27.67%), Postives = 146/300 (48.67%), Query Frame = 0 Query: 6 NYNVGVLGHVDSGKTSLA---------KALSTVSSTASFDKNPQSQARGITLDLGFSSFRVRPLPAQLAGSGASELQYTLVDCPGHASLIKTIIGGAQIIDMMMLVIDVNKGIQTQTAE-CLVIGEITCPKMLIVLNKVDLIDPGQRTAAVDKMKKRLKAALARTKFA--DAPMVAVSA--NPESSQEPVGVAELIEQLNAMTTM---PVRNVNGPFLFSVDHCFGIRGQGTVMTGTVLQGQIHVNENVEIVTIGES--RKVKSMQMFKQPVTAAQQGDRVGICVAQFDAKLLERGLVAA 286 + N+G +GHVD GK L K L++ A+ D P+ ++RGIT+++ + Y DCPGHA IK +I GA +D +LV+ G QT E L+I ++ +++ +NK D+ D ++ ++ ++ L+ F D P++ SA E +G +++ ++A+ + P R+++ PFL ++H I G+GTV+TG V +G++ V + VE + + KV ++MF + + A GD++GI + RG+V A Sbjct: 37 HLNIGTIGHVDHGKXXLXXAITNXLSEKKLASYKDYAAIDNAPEERSRGITINVAHIEY------------ATENRHYAHTDCPGHADFIKNMITGANNMDGAILVVGATDGCMPQTREHLLLIKQLGVEHIVVFINKCDVAD----EEMIELVEMEVRELLSENGFPGDDIPVIKGSALSACEDKNASLGKEQIVALMSAVDSYIPNPERDLDLPFLLPIEHVHTIPGRGTVVTGRVERGKLKVGQEVEFLGFNTAIKSKVTGIEMFHKILEEANAGDQMGILAXGVKKXDVXRGMVVA 320
BLAST of selenocysteine-specific elongation factor vs. L. salmonis genes
Match: EMLSAG00000006425 (supercontig:LSalAtl2s:LSalAtl2s351:266919:268368:-1 gene:EMLSAG00000006425 transcript:EMLSAT00000006425 description:"maker-LSalAtl2s351-augustus-gene-2.14") HSP 1 Score: 79.7221 bits (195), Expect = 4.217e-16 Identity = 78/275 (28.36%), Postives = 129/275 (46.91%), Query Frame = 0 Query: 1 MSQVLNYNVGVLGHVDSGKTSLAKALSTVSSTASFDKNPQSQARGITLDLGFSSFRV---------RPLPAQLAGSGASEL------------QYTLVDCPGHASLIKTIIGGAQIIDMMMLVIDVNKGI-QTQTAECLVIGEITCPKMLIVL-NKVDLIDPGQRTAAVDKMKKRLKAALARTKFADAPMVAVSANPESSQEPVGVAELIEQLNAMTTMPVRNVNGPFLFSVDHCFGIRG-------------QGTVMTGTVLQGQIHVNENVEI 239 +S+ N+G +GHV GK+++ KALS V T F + R IT+ LG+++ ++ RP+ GS + + VDCPGH L+ T++ GA ++D +L+I N+ Q QT+E L EI K +++L NKVDLI Q D++ + ++ +A AP++ +SA + + E V E IE+ +P+R S H IR +G V G++L+G + V + +E+ Sbjct: 35 ISRQATINIGTIGHVAHGKSTVVKALSGVH-TVRFKNELE---RNITIKLGYANAKIYKSSDPKCQRPVCYTSMGSNKEDTFSMNGFKYNVVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAIEIMKLKHILILQNKVDLIKEVQAKEQQDQILRFIEGTVAE----GAPIIPISAQLKYNIEV--VCEYIEK---KIPVPLRX-----FLSEPHLIIIRSFDVNKPGSEVEDLKGGVAGGSILKGVLKVGQEIEV 291
BLAST of selenocysteine-specific elongation factor vs. L. salmonis genes
Match: EMLSAG00000004106 (supercontig:LSalAtl2s:LSalAtl2s217:520810:522316:-1 gene:EMLSAG00000004106 transcript:EMLSAT00000004106 description:"maker-LSalAtl2s217-augustus-gene-5.29") HSP 1 Score: 75.485 bits (184), Expect = 8.718e-15 Identity = 82/334 (24.55%), Postives = 129/334 (38.62%), Query Frame = 0 Query: 5 LNYNVGVLGHVDSGKTSLAKAL------------------------STVSSTASFDKNPQSQARGITLDLGFSSFRVRPLPAQLAGSGASELQYTLVDCPGHASLIKTIIGGAQIIDMMMLVI-----DVNKGIQT--QTAECLVIGEITCPKMLIV-LNKVDLIDPGQRTAAVDKMKKRLKAALARTKF--ADAPMVAVSA---------NPESSQ-------EPVGVAELIEQLNAMTTM--PVRNVNGPFLFSVDHCFGIRGQGTVMTGTVLQGQIHVNENVEIVTIGESRKVKSMQMFKQPVTAAQQGDRVGICVAQFDAKLLERGLVAA 286 ++ N+ V GHVDSGK++ L + DK + RGIT+D+ F + T+ D PGH IK +I G D +L+I + GI QT E ++ K LIV +NK+D +P A +++KK + + + + A P V +S +P S G A L+A+ ++ P R + P + + I G GTV G V G + V + +VKS++M + + A GD VG + K ++RG VA+ Sbjct: 6 VHINIVVXGHVDSGKSTTTGHLIYQCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFE------------TPKFYVTIXDAPGHRDFIKNMITGTSXADCGVLIIASGTGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQARFEEIKKEVSGYIKKVGYNPATVPFVPISGWHGDNMLQTSPNMSWYKGWEITRKEGKASGTTLLDALXSIVPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPNNLTTEVKSVEMHHESLPEATPGDNVGFNIKNVSVKDIKRGYVAS 327
BLAST of selenocysteine-specific elongation factor vs. L. salmonis genes
Match: EMLSAG00000000330 (supercontig:LSalAtl2s:LSalAtl2s104:449607:454392:1 gene:EMLSAG00000000330 transcript:EMLSAT00000000330 description:"maker-LSalAtl2s104-augustus-gene-4.17") HSP 1 Score: 65.0846 bits (157), Expect = 2.226e-11 Identity = 95/382 (24.87%), Postives = 154/382 (40.31%), Query Frame = 0 Query: 5 LNYNVGVLGHVDSGKTSLAKALS--TVSSTASF-------DKNPQSQARGITLD---LGFSSFRV---RPLPAQLAGSGASELQ---YTLVDCPGHASLIKTIIGG--AQIIDMMMLVIDVNKGIQTQTAECLVIGEITCPKMLIVLNKVDLIDPGQRTAAVDKMKKRLKA----------------ALARTKFADAPMVAVSANPESSQEPVGVAELIEQLNAMTTMPVRNVNGPFLFSVDHCFGIRGQGTVMTGTVLQGQIHVNENVEI--VTIGE--SRKVKSMQMFKQPVTAAQQGDRVGICVAQFDAKLLERGLVA-APGHVP---WIF-GAIISL-KPITYFKGGIASKAKFHISLGHETVLAKITLFEALTLEGG 340 + V V+G+VD+GK++L L+ + + F K+ Q R ++ LGF S +P L E T +D GH +KT + G D ML+I N GI T E L + + +V+ K+D+ P + + + LK+ L+ TKF + + S E + + ++ +N ++T P F +D + + G GTV++GT L G I VN+N+ + +G S VKS+ + PVT + G + + + +G+V AP P W F G I+ L P T IA++ + + G A IT L G Sbjct: 117 MEIRVAVVGNVDAGKSTLLGVLTHGELDNGRGFARQKLFRHKHEQESGRTSSVGNDILGFDSIGNVVNKPDHGNLDWVRVCEESSKVITFIDLAGHERYLKTTVFGMTGHAPDFGMLMIGANAGIVGMTKEHLGLALALSVPVFVVVTKIDMCPPNVLQDTLKLLVRILKSPGCRKFPVLVKSSDDVVLSATKFVSERLCPIFQVSNVSGENLELLKMF--MNLLSTRSPNTDKEPAEFQIDDTYSVPGVGTVVSGTNLVGTIRVNDNLLLGPDPLGNFTSIAVKSIHRKRMPVTEVRSGQTASFALKKIKRSAIRKGMVMLAPSLEPQSCWDFEGDIMVLHHPTT-----IAARYQAMVHCGSIRQTASITKMSVDCLRTG 491
BLAST of selenocysteine-specific elongation factor vs. L. salmonis genes
Match: EMLSAG00000008108 (supercontig:LSalAtl2s:LSalAtl2s482:182113:187772:1 gene:EMLSAG00000008108 transcript:EMLSAT00000008108 description:"maker-LSalAtl2s482-snap-gene-1.29") HSP 1 Score: 55.8398 bits (133), Expect = 2.372e-8 Identity = 41/142 (28.87%), Postives = 61/142 (42.96%), Query Frame = 0 Query: 8 NVGVLGHVDSGKTSLAKALSTVSSTASF---------DKNPQSQARGITLDLGFSSFRVRPLPAQLAGSGASELQY-----TLVDCPGHASLIKTIIGGAQIIDMMMLVIDVNKGIQTQTAECLVIGEITCPKMLIVLNKVD 135 N+ +L HVD GKT+LA +L + S D P QA GIT+ S A L + L+D PGH + ++ D +++IDV + +Q QT L + K ++VLNK+D Sbjct: 21 NICILAHVDHGKTTLADSLLACNGIISLRLSGTLRYLDSRPDEQAXGITM-----------------KSSAVSLYHENHLINLIDSPGHVDFSSEVCXAVRLSDGALVLIDVVESVQPQTRAVLKQAWVEGIKPILVLNKMD 145
BLAST of selenocysteine-specific elongation factor vs. L. salmonis genes
Match: EMLSAG00000000297 (supercontig:LSalAtl2s:LSalAtl2s1044:24227:29290:-1 gene:EMLSAG00000000297 transcript:EMLSAT00000000297 description:"maker-LSalAtl2s1044-augustus-gene-0.34") HSP 1 Score: 55.4546 bits (132), Expect = 3.661e-8 Identity = 44/146 (30.14%), Postives = 72/146 (49.32%), Query Frame = 0 Query: 9 VGVLGHVDSGKTSLAKALSTVSSTASFDKNPQSQARGITLDLGFSSFRVRPLPAQLAGSGASELQYTLVDCPGHASLIKTIIGGAQIIDMMMLVIDVNKGIQTQTAECLVIGEITCPKMLIVLNKVDLIDPGQRTAAVDKMKKRLK 154 V +LGH+D GKT+L L S T ++ GIT +G +F V P+P+ + + T +D PGHA+ G D+ +LV+D +G+ QT E L + + + ++ +NK+D + A V+ K+ LK Sbjct: 146 VAILGHIDHGKTTLLDYLRKSSVT-------DNEFGGITQHIG--AFSV-PVPSFVQNT------ITFIDTPGHAAFKSMRNRGVCATDIAILVVDACEGVLEQTLESLSMIKESGRPYIVAINKID-----KPNADVNATKESLK 270
BLAST of selenocysteine-specific elongation factor vs. L. salmonis genes
Match: EMLSAG00000008145 (supercontig:LSalAtl2s:LSalAtl2s487:142410:144801:1 gene:EMLSAG00000008145 transcript:EMLSAT00000008145 description:"maker-LSalAtl2s487-augustus-gene-1.18") HSP 1 Score: 54.6842 bits (130), Expect = 4.351e-8 Identity = 37/137 (27.01%), Postives = 60/137 (43.80%), Query Frame = 0 Query: 8 NVGVLGHVDSGKTSLAKAL--------STVSSTASFDKNPQSQARGITLDLGFSSFRVRPLPAQLAGSGASELQYTLVDCPGHASLIKTIIGGAQIIDMMMLVIDVNKGIQTQTAECLVIGEITCPKMLIVLNKVDL 136 N+ ++ HVD GK++LA + +V + DK + RGIT+ +S + G E L+D PGH + + ++L++D N+G+Q QT ++ VLNKVDL Sbjct: 44 NISIIAHVDHGKSTLADRILEYVGAIDKSVDNKQVLDKLRVERERGITVKAQTASI--------IYSKGNMEYLINLIDTPGHVDFASEVTRSLKACQGVVLLVDANQGVQAQTMSNFFAAFSEDKAIIPVLNKVDL 172
BLAST of selenocysteine-specific elongation factor vs. L. salmonis genes
Match: EMLSAG00000001144 (supercontig:LSalAtl2s:LSalAtl2s118:590728:599479:1 gene:EMLSAG00000001144 transcript:EMLSAT00000001144 description:"maker-LSalAtl2s118-snap-gene-5.25") HSP 1 Score: 53.1434 bits (126), Expect = 1.490e-7 Identity = 41/135 (30.37%), Postives = 65/135 (48.15%), Query Frame = 0 Query: 9 VGVLGHVDSGKTSLAKALSTVSSTASFDKNPQSQARGITLDLGFSSFRVRPLPAQLAG-SGASELQYTL-----VDCPGHASLIKTIIGGAQIIDMMMLVIDVNKGIQTQTAECLVIGEITCPKMLIVLNKVDLI 137 V VLGHVD+GKT K L + T D +A GIT +G ++ + + Q S+ Q L +D PGH S G+ + D+ +LV+D+ ++ QT E + + + ++ LNK+D I Sbjct: 348 VCVLGHVDTGKT---KILDKLRRTNVQD----GEAGGITQQIGATNVPIEVVQEQCKNVKDVSKTQLKLPGLLIIDTPGHESFSNLRDRGSSLCDIAILVVDIMHNLEPQTIESINLLKKKKTPFVVALNKLDRI 475
BLAST of selenocysteine-specific elongation factor vs. SwissProt
Match: gi|341942023|sp|Q9JHW4.2|SELB_MOUSE (RecName: Full=Selenocysteine-specific elongation factor; AltName: Full=Elongation factor sec; AltName: Full=Eukaryotic elongation factor, selenocysteine-tRNA-specific; Short=mSelB) HSP 1 Score: 554.288 bits (1427), Expect = 0.000e+0 Identity = 290/579 (50.09%), Postives = 393/579 (67.88%), Query Frame = 0 Query: 5 LNYNVGVLGHVDSGKTSLAKALSTVSSTASFDKNPQSQARGITLDLGFSSFRVRPLPAQLAGSGASELQYTLVDCPGHASLIKTIIGGAQIIDMMMLVIDVNKGIQTQTAECLVIGEITCPKMLIVLNKVDLIDPGQRTAAVDKMKKRLKAALARTKFADAPMVAVSANP-----ESSQEPVGVAELIEQLNAMTTMPVRNVNGPFLFSVDHCFGIRGQGTVMTGTVLQGQIHVNENVEIVTIGESRKVKSMQMFKQPVTAAQQGDRVGICVAQFDAKLLERGLVAAPGHVPWIFGAIISLKPITYFKGGIASKAKFHISLGHETVLAKITLF----EALTLEGGHARDGFNFEHDYSYLDEI-----------GEDQKES---------VPKPLYALLEFEKSLPVVPDCKVLGSKLDINSNSPSCRLAFHGQLLERFQDKAYVSKDLVRLKIFKEKKKEGVVERASNACEVICKSMFKKETNLSLFSGLKVLFSTGETGQIEDSFGQSGKFKVRIPDGLQASTLEQLEARSKK---SKKDSSSAPTTGA-----LDPIHISLSFKKYIFS--KKMAQ 544 +N NVGVLGH+DSGKT+LA+ALST +STA+FDK PQS+ RGITLDLGFS F V PLP GS + LQ TLVDCPGHASLI+TIIGGAQIID+MMLVIDV KG+QTQ+AECLVIG+I C K+++VLNK+DL+ G+R AA+DKM K+++ L TKF AP++ V+A P ++ P G++ELIE L + ++P R+ +GPFL SVDHCF I+GQGTVMTGT+L G I + ++VEI + +KVKSMQMF PVT+A QGDR+GICV QFD KLLERGLV AP + + A+IS++ I YF+G + +KAKFHI++GHETV+ + F ++ LE D F+ +Y + ++ G+D+ + P+ +AL+EFEK + C V+GS+LD + ++ +CRLAFHG LL+ +DK Y+ L L+++K K K G+VER + VI +S+FKKETN+ LF GLKV STGE G I+ +FGQSGKFK+ IP GL + + L KK + + ++ P G + P+ ++LSFK+Y+F K+M Q Sbjct: 6 VNVNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITLDLGFSCFVV-PLPGAEPGSSDTLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKIDLLAEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVAAKPGGPEAPETEAPQGISELIELLKSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGTISLGDSVEIPALKVVKKVKSMQMFHTPVTSAMQGDRLGICVTQFDPKLLERGLVCAPESLHTVHAALISVEKIPYFRGPLQTKAKFHITVGHETVMGRTLFFSPAPDSFDLE--PVLDSFDLSREYLFQEQYLCKDSMPTATEGDDEADPKAGHAPGGHCPRQQWALVEFEKPVTCPRLCLVIGSRLDADIHTNTCRLAFHGVLLQGLEDKNYIESFLPALRVYKLKHKHGLVERVMDDYSVIGRSLFKKETNIQLFVGLKVQLSTGEQGIIDSAFGQSGKFKIHIPGGLSPESKKILTPTLKKRSRAGRGETTKPEEGTERPEPIQPVTLNLSFKRYVFDTQKRMVQ 581
BLAST of selenocysteine-specific elongation factor vs. SwissProt
Match: gi|259016384|sp|P57772.4|SELB_HUMAN (RecName: Full=Selenocysteine-specific elongation factor; AltName: Full=Elongation factor sec; AltName: Full=Eukaryotic elongation factor, selenocysteine-tRNA-specific) HSP 1 Score: 548.895 bits (1413), Expect = 0.000e+0 Identity = 291/590 (49.32%), Postives = 388/590 (65.76%), Query Frame = 0 Query: 5 LNYNVGVLGHVDSGKTSLAKALSTVSSTASFDKNPQSQARGITLDLGFSSFRVRPLPAQLAGS--------------GASELQYTLVDCPGHASLIKTIIGGAQIIDMMMLVIDVNKGIQTQTAECLVIGEITCPKMLIVLNKVDLIDPGQRTAAVDKMKKRLKAALARTKFADAPMVAVSANP-----ESSQEPVGVAELIEQLNAMTTMPVRNVNGPFLFSVDHCFGIRGQGTVMTGTVLQGQIHVNENVEIVTIGESRKVKSMQMFKQPVTAAQQGDRVGICVAQFDAKLLERGLVAAPGHVPWIFGAIISLKPITYFKGGIASKAKFHISLGHETVLAKITLFEAL--TLEGGHARDGFNFEHDYSYLDEI-------------------GEDQKESVPKPLYALLEFEKSLPVVPDCKVLGSKLDINSNSPSCRLAFHGQLLERFQDKAYVSKDLVRLKIFKEKKKEGVVERASNACEVICKSMFKKETNLSLFSGLKVLFSTGETGQIEDSFGQSGKFKVRIPDGLQASTLEQLEARSKK--------SKKDSSSAPTTGALDPIHISLSFKKYIFS--KKMAQ 544 +N NVGVLGH+DSGKT+LA+ALST +STA+FDK PQS+ RGITLDLGFS F V PLPA+L S G LQ TLVDCPGHASLI+TIIGGAQIID+MMLVIDV KG+QTQ+AECLVIG+I C K+++VLNK+DL+ G+R AA+DKM K+++ L TKF AP++ V+A P ++ P G+ ELIE L + ++P R+ +GPFL SVDHCF I+GQGTVMTGT+L G I + ++VEI + +KVKSMQMF P+T+A QGDR+GICV QFD KLLERGLV AP + + A+IS++ I YF+G + +KAKFHI++GHETV+ ++ F + D FNF +Y + ++ G+ + P+ +AL+EFEK + C V+GS+LD + ++ +CRLAFHG LL +D+ Y L RLK++K K K G+VERA + VI +S+FKKETN+ LF GLKV STGE G I+ +FGQSGKFK+ IP GL + + L KK + + SA + + +SL+FK+Y+F K+M Q Sbjct: 6 VNVNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITLDLGFSCFSV-PLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVAAKPGGPEAPETEAPQGIPELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCAPESLHTVHAALISVEKIPYFRGPLQTKAKFHITVGHETVMGRLMFFSPAPDNFDQEPILDSFNFSQEYLFQEQYLSKDLTPAVTDNDEADKKAGQATEGHCPRQQWALVEFEKPVTCPRLCLVIGSRLDADIHTNTCRLAFHGILLHGLEDRNYADSFLPRLKVYKLKHKHGLVERAMDDYSVIGRSLFKKETNIQLFVGLKVHLSTGELGIIDSAFGQSGKFKIHIPGGLSPESKKILTPALKKRARAGRGEATRQEESAERSEPSQHVVLSLTFKRYVFDTHKRMVQ 594
BLAST of selenocysteine-specific elongation factor vs. SwissProt
Match: gi|2833515|sp|Q57918.1|SELB_METJA (RecName: Full=Selenocysteine-specific elongation factor; AltName: Full=SelB translation factor) HSP 1 Score: 197.208 bits (500), Expect = 9.982e-56 Identity = 135/412 (32.77%), Postives = 223/412 (54.13%), Query Frame = 0 Query: 6 NYNVGVLGHVDSGKTSLAKALSTVSSTASFDKNPQSQARGITLDLGFSSFRVRPLPAQLAGSGASELQYTLVDCPGHASLIKTIIGGAQIIDMMMLVIDVNKGIQTQTAECLVIGEITCPKMLIVLNKVDLIDPGQRTAAVDKMKKRLKAALARTKFADAPMVAVSANPESSQEPVGVAELIEQL-NAMTTMPV-RNVNGPFLFSVDHCFGIRGQGTVMTGTVLQGQIHVNENVEIVTIGESRKVKSMQMFKQPVTAAQQGDRVGICVAQFDAKLLERG--LVAAPGHVPWIFGAIISLKPITYFKGGIASKAKFHISLGHETVLAKITLFEALTLEGGHARDGFNFEHDYSYLDEI-GEDQKESVPKPLYALLEFEKSLPVVPDCKVLGSKLDINSNSPSCRLAFHGQLLE 412 N NVG+ GH+D GKT LAK L+ ++ST++ DK +SQ RGIT+DLGFSSF + + TLVD PGH+ LI+T IG IID +LV+D +G +TQT E L++ ++ ++V+NK+D+ + + MK+ L + + ++ ++ +SA G+ EL ++L N + ++ + R++N +DH F I+G GTV+TGT+ +G++ V +N+ I+ I KVKS+Q FKQ V+ A GDRVG+ + + + L RG L + + + I +K + FK +A K K HI++G TV A I ++ + N + + L+EI G D Y + + E+ + V K+L +LD+ + R+ G++++ Sbjct: 9 NVNVGLFGHIDHGKTQLAKQLTEIASTSALDKPKESQKRGITIDLGFSSFTL------------DRYRITLVDAPGHSELIRTAIGAGNIIDAALLVVDAKEGPKTQTGEHLLVLDLLNIPTIVVINKIDIANDEEIKRTEMFMKQILNSTI---NLKNSKIIKISAKTGE-----GIGELKKELKNLLDSLDIKRDINSYLKMPIDHAFKIKGVGTVVTGTIHKGKVEVGDNLRILPINHEVKVKSIQCFKQDVSIAYAGDRVGMALMGVEPESLFRGCILTSEDTKLKVVDKFIAKVKILELFKYNLAPKMKVHINIGLLTVPATIIPYKI---------EKINDKEEPIILEEIKGGDS-------CYCIFKLEERVVVDEGDKILIMRLDLPPT--TLRICGFGEVID 382
BLAST of selenocysteine-specific elongation factor vs. SwissProt
Match: gi|1706598|sp|P50062.1|EFTU_BORBU (RecName: Full=Elongation factor Tu; Short=EF-Tu >gi|226741078|sp|B7J241.1|EFTU_BORBZ RecName: Full=Elongation factor Tu; Short=EF-Tu) HSP 1 Score: 161.384 bits (407), Expect = 4.301e-43 Identity = 105/305 (34.43%), Postives = 164/305 (53.77%), Query Frame = 0 Query: 6 NYNVGVLGHVDSGKTSLAKALSTVSSTAS----------FDKNPQSQARGITLDLGFSSFRVRPLPAQLAGSGASELQYTLVDCPGHASLIKTIIGGAQIIDMMMLVIDVNKGIQTQTAECLVIGE-ITCPKMLIVLNKVDLIDPGQRTAAVDKMKKRLKAALARTKF-ADAPMVAVSA-----NPESSQEPVGVAELIEQLNAMTTMPVRNVNGPFLFSVDHCFGIRGQGTVMTGTVLQGQIHVNENVEIVTIGESRK--VKSMQMFKQPVTAAQQGDRVGICVAQFDAKLLERG-LVAAPGHV 290 + NVG +GHVD GKT+L A+S S + D P+ +ARGIT++ R + + A Y VDCPGHA IK +I GA +D +L++ + G + QT E L++ + + K+++ LNK+DL DP + + + + F AD P++ SA NPE + V EL+E ++ +P R+++ PFL +V+ F I G+GTV TG + +G I V + VEIV I E+RK V ++MF++ + Q GD VG+ + D K +ERG +++APG + Sbjct: 12 HMNVGTIGHVDHGKTTLTAAISIYCSKLNKDAKALKYEDIDNAPEEKARGITIN-------ARHIEYETANR-----HYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGAEPQTKEHLLLAQRMGIKKIIVFLNKLDLADPELVELV----EVEVLELVEKYGFSADTPIIKGSAFGAMSNPEDPESTKCVKELLESMDNYFDLPERDIDKPFLLAVEDVFSISGRGTVATGRIERGIIKVGQEVEIVGIKETRKTTVTGVEMFQKILEQGQAGDNVGLLLRGVDKKDIERGQVLSAPGTI 300
BLAST of selenocysteine-specific elongation factor vs. SwissProt
Match: gi|119209|sp|P22679.1|EFTU_MYCHP (RecName: Full=Elongation factor Tu; Short=EF-Tu) HSP 1 Score: 160.614 bits (405), Expect = 6.815e-43 Identity = 113/381 (29.66%), Postives = 184/381 (48.29%), Query Frame = 0 Query: 8 NVGVLGHVDSGKTSLAKALSTV---------SSTASFDKNPQSQARGITLDLGFSSFRVRPLPAQLAGSGASELQYTLVDCPGHASLIKTIIGGAQIIDMMMLVIDVNKGIQTQTAECLVIG-EITCPKMLIVLNKVDLIDPGQRTAAVDKMKKRLKAALARTKFA--DAPMVAVSA------NPESSQEPVGVAELIEQLNAMTTMPVRNVNGPFLFSVDHCFGIRGQGTVMTGTVLQGQIHVNENVEIVTIGESRK--VKSMQMFKQPVTAAQQGDRVGICVAQFDAKLLERGLVAAP-----------------------GHVPWIFGAIISLKPITYFK-----GGIASKAKFHISLGHETVLAKITLFEALTLEGG 340 N+G +GHVD GKT+L A++TV AS D P+ +ARGIT++ ++ + Y VDCPGHA +K +I GA +D +LV+ G QT E +++ ++ PK+++ LNK+D+ +R V ++ +++ L+ F +AP++A SA +PE + G+ EL++ ++ P R + PFL +V+ F I G+GTV TG V +G + +NE VEIV + ++K V ++MF++ + AQ GD G+ + D +ERG V A H P+ + KP YF+ GGI K + + + V +TL + +E G Sbjct: 14 NIGTIGHVDHGKTTLTAAIATVLAKKGLAEARDYASIDNAPEEKARGITINTSHIEYQ------------TEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLARQVGVPKIVVFLNKIDMFKDDEREEMVGLVEMDVRSLLSEYGFDGDNAPIIAGSALKALQGDPEYEK---GILELMDAVDTYIEEPKRETDKPFLMAVEDVFTITGRGTVATGRVERGVLQLNEEVEIVGLKPTKKTVVTGIEMFRKNLKEAQAGDNAGLLLRGIDRSEVERGQVLAKPKTIVPHTQFEATVYVLKKEEGGRHTPFFH----NYKPQFYFRTTDVTGGIEFKPGREMVVPGDNVELTVTLIAPIAIEEG 375
BLAST of selenocysteine-specific elongation factor vs. SwissProt
Match: gi|254765573|sp|A1QZR2.1|EFTU_BORT9 (RecName: Full=Elongation factor Tu; Short=EF-Tu) HSP 1 Score: 160.614 bits (405), Expect = 7.675e-43 Identity = 109/324 (33.64%), Postives = 168/324 (51.85%), Query Frame = 0 Query: 6 NYNVGVLGHVDSGKTSLAKALSTVSSTAS----------FDKNPQSQARGITLDLGFSSFRVRPLPAQLAGSGASELQYTLVDCPGHASLIKTIIGGAQIIDMMMLVIDVNKGIQTQTAECLVIGE-ITCPKMLIVLNKVDLIDPGQRTAAVDKMKKRLKAALARTKF-ADAPMVAVSA-----NPESSQEPVGVAELIEQLNAMTTMPVRNVNGPFLFSVDHCFGIRGQGTVMTGTVLQGQIHVNENVEIVTIGESRK--VKSMQMFKQPVTAAQQGDRVGICVAQFDAKLLERGLVAAPGHVPWIFGAIISLKPITYFKGGI 310 + NVG +GHVD GKT+L A+S S + D P+ +ARGIT++ R + + AG + Y VDCPGHA IK +I GA +D +L++ + G + QT E L++ + + K+++ LNK+DL DP + + + + F D P+V SA NP+ + + EL+E ++ +P R+++ PFL +V+ F I G+GTV TG + +G I V + VEIV I E+RK V ++MF++ + Q GD VG+ + D K +ERG V A AI ++ P FK I Sbjct: 12 HMNVGTIGHVDHGKTTLTAAISIYCSKVNKDAKALKYEDIDNAPEEKARGITIN-------ARHIEYETAG-----MHYAHVDCPGHADYIKNMITGAAQMDAAVLLVAADSGAEPQTKEHLLLAQRMGINKIIVFLNKLDLADPELVELV----EVEVLELVEKYGFPGDTPIVKGSAFGAMSNPDDPEATKCIKELLETMDNYFDLPQRDIDKPFLLAVEDVFSISGRGTVATGRIERGVIKVGQEVEIVGIRETRKTTVTGVEMFQKILEQGQAGDNVGLLLRGVDKKDIERGQVIA---------AIGTITPHKKFKASI 310
BLAST of selenocysteine-specific elongation factor vs. SwissProt
Match: gi|123743741|sp|Q3B6G3.1|EFTU_PELLD (RecName: Full=Elongation factor Tu; Short=EF-Tu) HSP 1 Score: 159.458 bits (402), Expect = 1.762e-42 Identity = 105/322 (32.61%), Postives = 164/322 (50.93%), Query Frame = 0 Query: 6 NYNVGVLGHVDSGKTSLAKALSTVSSTASF---------DKNPQSQARGITLDLGFSSFRVRPLPAQLAGSGASELQYTLVDCPGHASLIKTIIGGAQIIDMMMLVIDVNKGIQTQTAECLVIG-EITCPKMLIVLNKVDLIDPGQRTAAVDKMKKRLKAALARTKFA----DAPMVAVSANPESSQEPVG---VAELIEQLNAMTTMPVRNVNGPFLFSVDHCFGIRGQGTVMTGTVLQGQIHVNENVEIVTIGESRK--VKSMQMFKQPVTAAQQGDRVGICVAQFDAKLLERGLV-AAPGHVPWIFGAIISLKPITYFK 307 + N+G +GHVD GKT+L A+++V S F DK P+ + RGIT+ ++ + Y +DCPGHA IK +I GA +D +LV+ G QT E +++ ++ P +++ LNKVD+ DP ++ T++ D P++ SA +P G + EL++ ++ PVR+V+ PFL V+ F I G+GTV TG + +G+I +NE VEIV I ++RK V ++MF++ + Q GD G+ + D LERG+V A PG ++KP T FK Sbjct: 12 HVNIGTIGHVDHGKTTLTAAITSVLSKKGFAESRAFGDIDKAPEERERGITISTAHVEYQ------------TEKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMPQTREHILLARQVNVPALVVFLNKVDIADPELLELVE------MELRELLTEYGFPGDDIPIIKGSALKALEGDPEGEKAILELMDAVDNYIPEPVRDVDKPFLMPVEDVFSISGRGTVGTGRIERGRIKINEEVEIVGIKDTRKSVVTGIEMFQKLLDEGQAGDNAGLLLRGVDKTELERGMVIAKPG----------TIKPHTKFK 305
BLAST of selenocysteine-specific elongation factor vs. SwissProt
Match: gi|81609970|sp|Q661E5.1|EFTU_BORGA (RecName: Full=Elongation factor Tu; Short=EF-Tu) HSP 1 Score: 159.458 bits (402), Expect = 1.819e-42 Identity = 105/305 (34.43%), Postives = 167/305 (54.75%), Query Frame = 0 Query: 6 NYNVGVLGHVDSGKTSLAKALSTVSSTAS----------FDKNPQSQARGITLDLGFSSFRVRPLPAQLAGSGASELQYTLVDCPGHASLIKTIIGGAQIIDMMMLVIDVNKGIQTQTAECLVIGE-ITCPKMLIVLNKVDLIDPGQRTAAVDKMKKRLKAALARTKF-ADAPMVAVSA-----NPESSQEPVGVAELIEQLNAMTTMPVRNVNGPFLFSVDHCFGIRGQGTVMTGTVLQGQIHVNENVEIVTIGESRK--VKSMQMFKQPVTAAQQGDRVGICVAQFDAKLLERG-LVAAPGHV 290 + NVG +GHVD GKT+L A+S S + D P+ +ARGIT++ R + + A Y VDCPGHA IK +I GA +D +L++ + G + QT E L++ + + K+++ LNK+DL DP V+ ++ + + + F A+ P++ SA NPE + V EL+E ++ +P R+++ PFL +V+ F I G+GTV TG + +G I V + VEIV I E+RK V ++MF++ + Q GD VG+ + D K +ERG +++APG + Sbjct: 12 HMNVGTIGHVDHGKTTLTAAISIYCSKLNKDAKALKYEDIDNAPEEKARGITIN-------ARHIEYETANR-----HYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGAEPQTKEHLLLAQRMGIKKIIVFLNKLDLADP----ELVELVEVEVLELVEKYGFSANTPIIKGSAFGAMSNPEDPESTKCVKELLESMDNYFDLPERDIDKPFLLAVEDVFSISGRGTVATGRIERGVIKVGQEVEIVGIKETRKTTVTGVEMFQKILEQGQAGDNVGLLLRGVDKKDIERGQVLSAPGTI 300
BLAST of selenocysteine-specific elongation factor vs. SwissProt
Match: gi|81378512|sp|Q600B6.1|EFTU_MYCH2 (RecName: Full=Elongation factor Tu; Short=EF-Tu >gi|123761613|sp|Q4A7K0.1|EFTU_MYCH7 RecName: Full=Elongation factor Tu; Short=EF-Tu) HSP 1 Score: 159.844 bits (403), Expect = 1.887e-42 Identity = 101/297 (34.01%), Postives = 158/297 (53.20%), Query Frame = 0 Query: 8 NVGVLGHVDSGKTSLAKALSTV---------SSTASFDKNPQSQARGITLDLGFSSFRVRPLPAQLAGSGASELQYTLVDCPGHASLIKTIIGGAQIIDMMMLVIDVNKGIQTQTAECLVIG-EITCPKMLIVLNKVDLIDPGQRTAAVDKMKKRLKAALARTKFA--DAPMVAVSANPESSQEPVGVAELIEQLNAMTTM---PVRNVNGPFLFSVDHCFGIRGQGTVMTGTVLQGQIHVNENVEIVTIGESRK---VKSMQMFKQPVTAAQQGDRVGICVAQFDAKLLERGLVAA 286 N+G +GHVD GKT+L A+STV AS D P+ +ARGIT++ + + Y VDCPGHA IK +I GA +D +LV+ G QT E +++ ++ PKM++ LNK+DL++ + VD ++ ++ L+ F + P++ SA +P A+++E ++A+ + PVR ++ PFL +V+ F I G+GTV TG V +GQ+ +NE VEIV E K + ++MF + + A GD G+ + D K +ERG V A Sbjct: 20 NIGTIGHVDHGKTTLTAAISTVLAKKGLAEAKDYASIDAAPEEKARGITINTAHIEY------------STDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHILLSKQVGVPKMVVFLNKIDLLEGEEEM--VDLVEVEIRELLSSYDFDGDNTPIIRGSARGALEGKPEWEAKVLELMDAVDSYIDSPVREMDKPFLMAVEDVFTITGRGTVATGKVERGQVKLNEEVEIVGYREEPKKTVITGIEMFNKNLQTAMAGDNAGVLLRGVDRKDIERGQVIA 302
BLAST of selenocysteine-specific elongation factor vs. SwissProt
Match: gi|123761647|sp|Q4A9G1.1|EFTU_MYCHJ (RecName: Full=Elongation factor Tu; Short=EF-Tu) HSP 1 Score: 159.458 bits (402), Expect = 2.005e-42 Identity = 101/297 (34.01%), Postives = 158/297 (53.20%), Query Frame = 0 Query: 8 NVGVLGHVDSGKTSLAKALSTV---------SSTASFDKNPQSQARGITLDLGFSSFRVRPLPAQLAGSGASELQYTLVDCPGHASLIKTIIGGAQIIDMMMLVIDVNKGIQTQTAECLVIG-EITCPKMLIVLNKVDLIDPGQRTAAVDKMKKRLKAALARTKFA--DAPMVAVSANPESSQEPVGVAELIEQLNAMTTM---PVRNVNGPFLFSVDHCFGIRGQGTVMTGTVLQGQIHVNENVEIVTIGESRK---VKSMQMFKQPVTAAQQGDRVGICVAQFDAKLLERGLVAA 286 N+G +GHVD GKT+L A+STV AS D P+ +ARGIT++ + + Y VDCPGHA IK +I GA +D +LV+ G QT E +++ ++ PKM++ LNK+DL++ + VD ++ ++ L+ F + P++ SA +P A+++E ++A+ + PVR ++ PFL +V+ F I G+GTV TG V +GQ+ +NE VEIV E K + ++MF + + A GD G+ + D K +ERG V A Sbjct: 20 NIGTIGHVDHGKTTLTAAISTVLAKRGLAEAKDYASIDAAPEEKARGITINTAHIEY------------STDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHILLSKQVGVPKMVVFLNKIDLLEGEEEM--VDLVEVEIRELLSSYDFDGDNTPIIRGSARGALEGKPEWEAKVLELMDAVDSYIDSPVREMDKPFLMAVEDVFTITGRGTVATGKVERGQVKLNEEVEIVGYREEPKKTVITGIEMFNKNLQTAMAGDNAGVLLRGVDRKDIERGQVIA 302
BLAST of selenocysteine-specific elongation factor vs. nr
Match: gi|961985091|ref|XP_014824645.1| (PREDICTED: selenocysteine-specific elongation factor isoform X1 [Poecilia mexicana]) HSP 1 Score: 590.497 bits (1521), Expect = 0.000e+0 Identity = 307/570 (53.86%), Postives = 395/570 (69.30%), Query Frame = 0 Query: 2 SQVLNYNVGVLGHVDSGKTSLAKALSTVSSTASFDKNPQSQARGITLDLGFSSFRVRPLPAQLAGSGASE----LQYTLVDCPGHASLIKTIIGGAQIIDMMMLVIDVNKGIQTQTAECLVIGEITCPKMLIVLNKVDLIDPGQRTAAVDKMKKRLKAALARTKFADAPMVAVSANPESSQ-----EPVGVAELIEQLNAMTTMPVRNVNGPFLFSVDHCFGIRGQGTVMTGTVLQGQIHVNENVEIVTIGESRKVKSMQMFKQPVTAAQQGDRVGICVAQFDAKLLERGLVAAPGHVPWIFGAIISLKPITYFKGGIASKAKFHISLGHETVLAKITLF-------EALTLEGGHARDGFNFEHDYSYLDEIGEDQKESVPKP---LYALLEFEKSLPVVPDCKVLGSKLDINSNSPSCRLAFHGQLLERFQDKAYVSKDLVRLKIFKEKKKEGVVERASNACEVICKSMFKKETNLSLFSGLKVLFSTGETGQIEDSFGQSGKFKVRIPDGLQASTLEQL------EARSKKSKKDSSSAPTTGALDPIHISLSFKKYIFS--KKMAQ 544 ++ LN+NVGVLGHVDSGKTSLA+ALS+ +STA+FDKNPQS+ RGITLDLGFSSF V P L + + LQ+TLVDCPGHASLI+TIIGGAQIID+MMLV+DV KG+QTQTAECL+IGE+TCP+M++VLNK+DL+ P +R +A++KM KRL L T+F + P++AV+A P + EP GV ELIE L T +P R+ G L +VDHCF IRGQGTVMTGT+LQG + +N+ VEI + ++K+KS+QMF++PV+ A QGDRVG+CV QFD KLLERGLV PG + ++ AIIS + I YFKG ++++AKFHI++GHETV+AK+T F E E F F+ +YSY DE QKE+ P +ALLEFE+ + C V+GSKLD + ++ +CRLAF G LL F+DK+Y L +L+IFK K KEG VER ++ VI +S+FKKETNL LF GLKV STGE+G IE FGQSGKFK+RI +GL+ T + L K S P T + P+ I L FK+Y+F KKM Q Sbjct: 9 AKTLNFNVGVLGHVDSGKTSLARALSSTASTAAFDKNPQSRERGITLDLGFSSFTVD-CPDHLRDNKGQQQYDSLQFTLVDCPGHASLIRTIIGGAQIIDLMMLVVDVVKGVQTQTAECLLIGELTCPRMVVVLNKIDLLPPNKRQSAIEKMTKRLHKTLESTRFKECPVIAVAAKPGGPEAPELEEPQGVPELIELLKKQTYLPKRDAKGDLLMAVDHCFSIRGQGTVMTGTILQGSLAINDTVEIPVLKVTKKIKSVQMFRKPVSGAMQGDRVGVCVTQFDPKLLERGLVCTPGSLRTLYAAIISTRKIGYFKGSLSTRAKFHITVGHETVMAKVTFFGLPPADTEPTPSEPSSLETPFTFDREYSYQDEYVSRQKEAASGPDPEQWALLEFERPVTCPALCLVIGSKLDTDIHANACRLAFQGCLLHGFEDKSYAETSLPQLRIFKTKHKEGQVERVTDDYSVIGRSLFKKETNLQLFVGLKVSLSTGESGVIEGGFGQSGKFKIRIQEGLRPETKQLLSSSKKKGKSGGKGGPSSEEEPKTES-QPVSIHLHFKRYVFDPHKKMVQ 576
BLAST of selenocysteine-specific elongation factor vs. nr
Match: gi|961128015|ref|XP_014784929.1| (PREDICTED: selenocysteine-specific elongation factor-like isoform X1 [Octopus bimaculoides]) HSP 1 Score: 590.112 bits (1520), Expect = 0.000e+0 Identity = 301/553 (54.43%), Postives = 383/553 (69.26%), Query Frame = 0 Query: 3 QVLNYNVGVLGHVDSGKTSLAKALSTVSSTASFDKNPQSQARGITLDLGFSSFRVRPLPAQLA--GSGASELQYTLVDCPGHASLIKTIIGGAQIIDMMMLVIDVNKGIQTQTAECLVIGEITCPKMLIVLNKVDLIDPGQRTAAVDKMKKRLKAALARTKFADAPMVAVSANPESSQ-----EPVGVAELIEQLNAMTTMPVRNVNGPFLFSVDHCFGIRGQGTVMTGTVLQGQIHVNENVEIVTIGESRKVKSMQMFKQPVTAAQQGDRVGICVAQFDAKLLERGLVAAPGHVPWIFGAIISLKPITYFKGGIASKAKFHISLGHETVLAKITLFEALTLEGGHARD-GFNFEHDYSYLDEIGEDQKESVPKPLYALLEFEKSLPVVPDCKVLGSKLDINSNSPSCRLAFHGQLLERFQDKAYVSKDLVRLKIFKEKKKEGVVERASNACEVICKSMFKKETNLSLFSGLKVLFSTGETGQIEDSFGQSGKFKVRIPDGLQASTLEQLEARSKKSKKDSSSAPTTGA-LDPIHISLSFKKYIFS--KKMAQ 544 + N+NVGVLGHVDSGKTSL+K LST +STA FDKNPQS+ RGITLDLGFSS V +P+ LA S LQ+T VDCPGHASLI+TIIGGAQIID+M+LV+D+ KGIQTQTAECLV+GEI C KM++VLNK DL+ P ++ A ++KM KRL L TKFA AP++AVSANP ++ + G+ EL+E L T +P RN+ GPF+FSVDHCF IRGQGTVMTGTVL G + +NE +EI ++ ++ VKSMQMF PV QGDR GICV QFD K LERGLV +PG +P I+ II +K Y+KG +++ AKFHI++GHET++A +T F E +D + +Y+Y +E+ E Q YALLEFEK + + C V+GSKLD + N+ CR+AFHGQLL + D Y L LKIFK K +EG VER ++A +I K +FKKETN+ F+ LKV S+GE G IE SFGQSGK K+RIP+GL L++ + KK K + +P GA +P+ I LSFK+YIF KKM Q Sbjct: 4 RTFNFNVGVLGHVDSGKTSLSKILSTTASTACFDKNPQSKERGITLDLGFSS-AVVDIPSHLAELTSKYERLQFTFVDCPGHASLIRTIIGGAQIIDLMILVVDITKGIQTQTAECLVVGEIACEKMVVVLNKTDLLPPAKKAATIEKMTKRLLKTLESTKFAKAPIIAVSANPGGTETGDTSKSEGIVELLETLKKYTYIPERNLTGPFIFSVDHCFTIRGQGTVMTGTVLNGSVSINETIEIPSLKVTKNVKSMQMFHLPVEKVVQGDRAGICVTQFDPKHLERGLVCSPGSLPTIYAGIIFVKKTPYYKGTVSTNAKFHITMGHETIMAHVTFFGT---ESASEQDTTLDLSKEYNYQEELLEKQPHQTNLCQYALLEFEKPITCLASCLVIGSKLDSDINANVCRIAFHGQLLTYYTDSKYKENKLSELKIFKIKSREGRVERVTDAHSLIGKDLFKKETNIQAFANLKVTLSSGENGIIEGSFGQSGKVKIRIPNGLSEEVLQRYSSSKKKGKTAEAVSP--GADQEPVKIILSFKRYIFDPKKKMIQ 550
BLAST of selenocysteine-specific elongation factor vs. nr
Match: gi|260816080|ref|XP_002602800.1| (hypothetical protein BRAFLDRAFT_281936 [Branchiostoma floridae] >gi|229288112|gb|EEN58812.1| hypothetical protein BRAFLDRAFT_281936 [Branchiostoma floridae]) HSP 1 Score: 590.112 bits (1520), Expect = 0.000e+0 Identity = 311/575 (54.09%), Postives = 395/575 (68.70%), Query Frame = 0 Query: 1 MSQVLNYNVGVLGHVDSGKTSLAKALSTVSSTASFDKNPQSQARGITLDLGFSSFRVR-PLPAQLAGSGASELQYTLVDCPGHASLIKTIIGGAQIIDMMMLVIDVNKGIQTQTAECLVIGEITCPKMLIVLNKVDLIDPGQRTAAVDKMKKRLKAALARTKFADAPMVAVSANPESSQEP----VGVAELIEQLNAMTTMPVRNVNGPFLFSVDHCFGIRGQGTVMTGTVLQGQIHVNENVEIVTIGESRKVKSMQMFKQPVTAAQQGDRVGICVAQFDAKLLERGLVAAPGHVPWIFGAIISLKPITYFKGGIASKAKFHISLGHETVLAKITLF---EALTLEGGHARDGFNFEHDYSYLDEI------------GEDQKESV---PKPLYALLEFEKSLPVVPDCKVLGSKLDINSNSPSCRLAFHGQLLERFQDKAYVSKDLVRLKIFKEKKKEGVVERASNACEVICKSMFKKETNLSLFSGLKVLFSTGETGQIEDSFGQSGKFKVRIPDGLQASTLEQLEARSKKSKKDSSSAPTTGALDP------IHISLSFKKYIFS--KKMAQ 544 M+ +LN+NVGVLGH+DSGKTSL KALSTV+STA+FDK+PQS+ RGITLDLGFSSF V P + +LQ+TLVDCPGHASLIKTIIGGAQIID+M+L++DV KG+QTQTAECLVIGEI C +M++VLNK DL+ +R ++KMK+++ A L T+FADAP++AV+A P + P VG+ EL++ L T +P R+ +GPF+F+VDHCF IRGQGTVMTGTVL G + +N+NVE+ + E +KVKSMQMFKQPV +A QGDRVGICV QFD KLLERGLV PG + I AI+ +K I +FKG +KAK HI++GHETV+A++ F +++ E H F+F +Y Y DE+ G E+V P +ALLEFEK + C V+GS+LD + ++ +CRLAFHG+LLE DK Y L +LK+FK K KEG+VER ++ VI +S+FKKETN+ LF GLKV STGE G IE FGQSGKFK+RIP GLQ T++ L S KK P I +SL FKKYIF KKM Q Sbjct: 1 MAAILNFNVGVLGHIDSGKTSLCKALSTVASTAAFDKHPQSKERGITLDLGFSSFSVDVPTHIKEQNPKYEKLQFTLVDCPGHASLIKTIIGGAQIIDLMLLIVDVTKGMQTQTAECLVIGEIACERMVVVLNKADLLPEAKRDQMIEKMKRKMAATLKSTRFADAPIIAVAAKPGGPEAPDTEAVGLQELMDLLKKHTYLPSRDASGPFIFAVDHCFSIRGQGTVMTGTVLNGTVAINDNVEVANVKEVKKVKSMQMFKQPVNSAMQGDRVGICVTQFDPKLLERGLVCTPGTLTLIHAAILKVKKIRFFKGACQTKAKIHITMGHETVMARVQFFGSQDSIEEEETH----FDFTKEYLYQDELYGQEGASKGKENGTADSEAVQASPSQQWALLEFEKPVICPQKCLVIGSRLDTDIHANTCRLAFHGRLLEPVVDKNYSETVLPKLKVFKNKSKEGMVERMTDEYTVIGRSLFKKETNIQLFVGLKVKLSTGEEGVIEGGFGQSGKFKIRIPQGLQPGTVQVL---SAAGKKKKGKKAEEEEAAPQAHGQGIQVSLQFKKYIFDPKKKMIQ 568
BLAST of selenocysteine-specific elongation factor vs. nr
Match: gi|1308387027|ref|XP_023123110.1| (selenocysteine-specific elongation factor [Amphiprion ocellaris]) HSP 1 Score: 589.341 bits (1518), Expect = 0.000e+0 Identity = 305/576 (52.95%), Postives = 402/576 (69.79%), Query Frame = 0 Query: 2 SQVLNYNVGVLGHVDSGKTSLAKALSTVSSTASFDKNPQSQARGITLDLGFSSFRVRPLPAQLAGSGASE----LQYTLVDCPGHASLIKTIIGGAQIIDMMMLVIDVNKGIQTQTAECLVIGEITCPKMLIVLNKVDLIDPGQRTAAVDKMKKRLKAALARTKFADAPMVAVSANP-----ESSQEPVGVAELIEQLNAMTTMPVRNVNGPFLFSVDHCFGIRGQGTVMTGTVLQGQIHVNENVEIVTIGESRKVKSMQMFKQPVTAAQQGDRVGICVAQFDAKLLERGLVAAPGHVPWIFGAIISLKPITYFKGGIASKAKFHISLGHETVLAKITLFEALTLEGGHA--------------RDGFNFEHDYSYLDEI--GEDQKESVPKP-LYALLEFEKSLPVVPDCKVLGSKLDINSNSPSCRLAFHGQLLERFQDKAYVSKDLVRLKIFKEKKKEGVVERASNACEVICKSMFKKETNLSLFSGLKVLFSTGETGQIEDSFGQSGKFKVRIPDGLQASTLEQL-----EARSKKSKKDSSSAPTTGALDPIHISLSFKKYIFS--KKMAQ 544 ++ LN+N+GVLGHVDSGKTSLA+ALS+ +STA+FDKNPQS+ RGITLDLGFSSF V LP L SG + LQ+TLVDCPGHASLI+TIIGGAQIID+MMLV+DV KG+QTQTAECL+IGE+TCP+M++VLNK+DL+ P +R +A++KM KRL L T+F + PM+AV+A P ++EP GV++LIE L T +P R+ G L +VDHCF IRGQGTVMTGTVLQG + +N+ VEI + ++K+KS+QMF++PV+ A QGDRVG+CV QFD KLLERG+V PG + +F A+IS++ I+YFKG +A++AKFHI++GHETV+A++T F + F F+ +Y + DE G+ + S P P +ALLEFE+ + C V+GSKLD + ++ +CRLAF G+LL+ F+DK YV L RL+I+K K KEG VER ++ VI +S+FKKETNL LF GLKV STGETG IE FGQSGKFK+R+ +GL T + L + SK + P + P+ I L FK+Y+F KKM Q Sbjct: 9 TKTLNFNIGVLGHVDSGKTSLARALSSTASTAAFDKNPQSRERGITLDLGFSSFTVD-LPDHLRDSGGQQPYDSLQFTLVDCPGHASLIRTIIGGAQIIDLMMLVVDVVKGVQTQTAECLLIGELTCPRMVVVLNKIDLLPPNKRQSAIEKMTKRLHKTLENTRFKECPMIAVAAKPGGPEAADTEEPQGVSQLIELLKKHTYLPQRDPGGDLLMAVDHCFSIRGQGTVMTGTVLQGSLAINDTVEIPALKVTKKIKSVQMFRKPVSGAMQGDRVGVCVTQFDPKLLERGVVCTPGSLRTLFAAVISVRKISYFKGSLATRAKFHITVGHETVMARVTFFGLPPVSASEPPSDSKPPPSEPCSLETPFTFDREYFHQDEYVAGQGEGSSGPDPEQWALLEFERPVTCPSLCLVIGSKLDTDIHANACRLAFQGRLLQGFEDKNYVETALPRLRIYKTKHKEGQVERVTDDYSVIGRSLFKKETNLQLFVGLKVTLSTGETGVIEGGFGQSGKFKIRVQEGLHPETKQLLSSASKKKGKSGSKGANEEEPKADS-QPVSIHLHFKRYVFDPHKKMVQ 582
BLAST of selenocysteine-specific elongation factor vs. nr
Match: gi|699240470|ref|XP_002124067.2| (PREDICTED: selenocysteine-specific elongation factor [Ciona intestinalis]) HSP 1 Score: 589.341 bits (1518), Expect = 0.000e+0 Identity = 299/572 (52.27%), Postives = 402/572 (70.28%), Query Frame = 0 Query: 1 MSQVLNYNVGVLGHVDSGKTSLAKALSTVSSTASFDKNPQSQARGITLDLGFSSFRVRPLPAQLAGSGASELQYTLVDCPGHASLIKTIIGGAQIIDMMMLVIDVNKGIQTQTAECLVIGEITCPKMLIVLNKVDLIDPGQRTAAVDKMKKRLKAALARTKFADAPMVAVSANPESS------QEPVGVAELIEQLNAMTTMPVRNVNGPFLFSVDHCFGIRGQGTVMTGTVLQGQIHVNENVEIVTIGESRKVKSMQMFKQPVTAAQQGDRVGICVAQFDAKLLERGLVAAPGHVPWIFGAIISLKPITYFKGGIASKAKFHISLGHETVLAKITLFEALTLEGGHARDG-----------------FNFEHDYSYLDEIGEDQKESVPKPLYALLEFEKSLPVVPDCKVLGSKLDINSNSPSCRLAFHGQLLERFQDKAYVSKDLVRLKIFKEKKKEGVVERASNACEVICKSMFKKETNLSLFSGLKVLFSTGETGQIEDSFGQSGKFKVRIPDGLQAST---LEQLEARSKKSKKDSSSAPTTGALDPIHISLSFKKYIF--SKKMAQ 544 M+++LN+N+G+LGHVDSGKTSLAKALSTV+STA+FDKNPQS+ RGITLDLGFSSF V +P L GSG ++QY LVDCPGHASLIKTIIGGAQIID+M+LVIDV KG+QTQTAECLVIGEI C KML+VLNKVD++ P ++ AA++KM KR++ L TKFA P+ +ANP S +EP G+ LI+ L T +P R+ +G FLFSVDHCF IRGQGTVMTGTVL G+ VN+ VEI ++ ++KVKS+QMF++PV A +QGDR G+CV QFD KLLERGLV PG +P ++ A++S+ I Y+ G +A+K+KFH+++GH TV+A+IT+F +T G + R+G F+F DY + E+ +D+ E +ALL F+K + + +GSK D + N+ CRLAF ++LE F K YVS L +LK++K K +EG VER + VICK + KKETN++LFSGL+V STGE+G I+ SFG SGK K+R+PDGL+ T L +SKK + +++ + +++ FK+YI+ +K+MAQ Sbjct: 23 MAEILNFNIGMLGHVDSGKTSLAKALSTVASTAAFDKNPQSKERGITLDLGFSSFTV-DVPEHLKGSGYEKVQYALVDCPGHASLIKTIIGGAQIIDLMVLVIDVVKGVQTQTAECLVIGEIICNKMLVVLNKVDMLPPEKKQAAIEKMTKRMQKTLENTKFAGCPITTAAANPGGSADVTTHREPEGIENLIQVLGDSTYIPTRSGDGSFLFSVDHCFSIRGQGTVMTGTVLSGKASVNDQVEISSLQMTKKVKSIQMFRKPVDAIKQGDRAGLCVTQFDPKLLERGLVCTPGSLPTLYAAVVSIAKIPYYSGSVATKSKFHVTIGHSTVMAQITIFAQVTTSGEN-REGSRPLGDAMERLTLQSKTFDFTADYIFRAELSKDKTEK----QWALLVFDKPVVCRANSLAIGSKFDTDINANRCRLAFKAEILEAFTAKDYVSSVLPKLKVYKNKSREGTVERVHDDYSVICKGLLKKETNIALFSGLRVELSTGESGVIDGSFGLSGKIKIRLPDGLKPETKVLLGGKGKKSKKKQTETTEPQQANTNQAVSVAMHFKRYIYDPAKRMAQ 588 The following BLAST results are available for this feature:
BLAST of selenocysteine-specific elongation factor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 9
BLAST of selenocysteine-specific elongation factor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of selenocysteine-specific elongation factor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold995_size72343:64238..66321- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold995_size72343-snap-gene-0.24 ID=maker-scaffold995_size72343-snap-gene-0.24|Name=selenocysteine-specific elongation factor|organism=Tigriopus kingsejongensis|type=gene|length=2084bp|location=Sequence derived from alignment at scaffold995_size72343:64238..66321- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'selenocysteine-specific elongation factor' has the following synonyms
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