nicotinic acetylcholine receptor alpha8 variant d, maker-scaffold99_size374999-snap-gene-0.24 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. L. salmonis genes
Match: EMLSAG00000001002 (supercontig:LSalAtl2s:LSalAtl2s116:424821:428389:1 gene:EMLSAG00000001002 transcript:EMLSAT00000001002 description:"maker-LSalAtl2s116-snap-gene-4.16") HSP 1 Score: 461.455 bits (1186), Expect = 6.285e-158 Identity = 271/577 (46.97%), Postives = 351/577 (60.83%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLTK----------------------------WFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEK--VTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRD-EVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLSQVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMRPSL 546 LYDDLL+NYN+L+RPV N ++ +T W+DYK++W+P++YGGVD L+VPS HIW PDIVL+NNADG +EVTL TKA L TG ++W+PPAIY SSC+++VE+FPFDEQTC MKFGSWTYD FQ+DL+H ++ +G+N+V +G+DL+EFY+SVEWDILAVPA RN + YT + DITF +T+RRKTLFYT NLIIPC+GISFLTVLVFYLPSDSGEK V+L ISILLSLTVFFLLLAEIIPPTSL VPLLGK++LFTMIL T SI VTV VLN+HFRSP TH M+PW+R+VFI I+P++L+M RP PE K+ S + + + + L+ R +H S D E A Q + S FH +N T + + H +P SP + I +G P +V A GV +IA+ K+ + +V EDWK++AMV+DR+FL+IFT L G++ IIL+AP+LYD R ++ Sbjct: 26 LYDDLLSNYNKLVRPVVNVSDAVTVKLKLKLSQLIDVNLRNQIMTTNLWVEQFWYDYKMRWEPDEYGGVDMLHVPSDHIWRPDIVLYNNADGNFEVTLSTKATLFNTGLVVWRPPAIYHSSCEMDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHQEEEQGTNVVNIGVDLSEFYMSVEWDILAVPAIRNVKVYT------------------------------CCDEPYLDITFNITMRRKTLFYTVNLIIPCMGISFLTVLVFYLPSDSGEKXNVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNVHFRSPQTHTMAPWVRRVFIHILPRLLVMRRP------GQSPESKMR-------SRPMIKENGYGHYMIEQVRLQHVIQQRESNHINVHYEASEDPETAYESKQNYKNSHFHDNNNTEIFDYSSCELHG------------TPENLPSPPPPLNPSFIYPGP--------NGECP--EVYRALDGVRYIAECTKREEDSCKVKEDWKYVAMVMDRLFLWIFTIAVLVGSAGIILQAPALYDTRAAI 537
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. L. salmonis genes
Match: EMLSAG00000009264 (supercontig:LSalAtl2s:LSalAtl2s58:470357:532297:1 gene:EMLSAG00000009264 transcript:EMLSAT00000009264 description:"maker-LSalAtl2s58-snap-gene-5.5") HSP 1 Score: 421.779 bits (1083), Expect = 5.490e-143 Identity = 245/533 (45.97%), Postives = 325/533 (60.98%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSC--GSTTLFESQHFPMVTPDCEGLKDDCPSRCRH--HTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPS-PPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLSQVAAAFKGVEFIAQHIKKADRDR 500 LYDDLL+NY+RLIRPV N++++LT +W DYKLKWKPEDYGGV L+VPSQ+IWLPDIVL+NNADG YEVT+MTKA L ++G ++W PPAIYKSSC+I+VE+FPFDEQ C MKFGSWTYD + +DL+H++Q S+ +++G+DL E+Y+S EWD++ PA RNE+YY + DI FY+TLRRK+LFYT N+IIPCVGISFL+VLVFYLPSDSGEKV+L ISILLSLTVFFLLLAEIIP TS+AVPLLGKYLLFTMILVT S+ +T+GVLN++FR+P+TH+M+PW+RK F++ +P+ L + RP+ + E E+ L + C S L +S PM + LK P H +L R + SRD++ S + PF+ S + + + S P+ S+S H D S + + + + A ++F+AQH+K D R Sbjct: 31 LYDDLLSNYDRLIRPVGNSSDRLTVKMGLKLSQIIGIDMKRQIMITNVWVAQEWHDYKLKWKPEDYGGVKHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHFSGRVVWNPPAIYKSSCEIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKGSSSEIEIGMDLQEYYISTEWDVMTAPAVRNEKYYP------------------------------CCEEPYPDIIFYLTLRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPSTSIAVPLLGKYLLFTMILVTFSVMLTIGVLNVNFRTPATHKMAPWVRKTFVEFLPRFLFIRRPE---KEEEEEEEVLFTPETECDEKSQALLQSSQPPMFLQKEDLLKIPPPFSLDHDEKSLQRISPSRDDIQSK-ISPSSGDPFYGSGNSGFPLYPLPLGGIDSSKDSVSELVPTFYGGSESMGYHGDYSSCERHLDKAHELN-------PALEKAMNALKFVAQHVKNEDXFR 522
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. L. salmonis genes
Match: EMLSAG00000000084 (supercontig:LSalAtl2s:LSalAtl2s1011:37280:47532:-1 gene:EMLSAG00000000084 transcript:EMLSAT00000000084 description:"augustus_masked-LSalAtl2s1011-processed-gene-0.0") HSP 1 Score: 337.035 bits (863), Expect = 2.837e-112 Identity = 160/311 (51.45%), Postives = 218/311 (70.10%), Query Frame = 0 Query: 25 KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYY--TPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERP 333 +W DYK W P +YGGV +YVPS+HIWLPDI+L+NNADG Y VT MTKA L Y G+++W PPAI+KSSC+I+VE+FPFD+QTC +KFGSW++D FQ+DL H++ ++ V G+DL+E+Y++VEWDIL VPA R+ + Y P+ Y DI F + +RRK LFY NLIIPCVGI +L++LVFYLP+ SGEK L I+IL+S T++F L+ E+IP TS +PLLG+YL+F+MI + +++T+T +LN+H+R PSTHRM W+R+ FIQ +P+ILLM P Sbjct: 10 EWKDYKFTWDPSEYGGVTEIYVPSEHIWLPDIILYNNADGDYIVTTMTKAILHYDGKVVWTPPAIFKSSCEIDVEFFPFDKQTCFLKFGSWSFDGFQVDLVHINSQPDNDTVSYGMDLSEYYLNVEWDILEVPAERHVKTYPCCPEPYP--------------------------------DIYFSIIIRRKPLFYVVNLIIPCVGIFYLSILVFYLPAQSGEKTALVIAILVSQTLYFTLVIEVIPATSKTLPLLGRYLIFSMIFIAIAVTLTTIILNLHYRKPSTHRMPQWVRRTFIQRLPRILLMRVP 288
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. L. salmonis genes
Match: EMLSAG00000006919 (supercontig:LSalAtl2s:LSalAtl2s391:531733:535693:-1 gene:EMLSAG00000006919 transcript:EMLSAT00000006919 description:"snap_masked-LSalAtl2s391-processed-gene-5.26") HSP 1 Score: 276.559 bits (706), Expect = 2.211e-88 Identity = 130/177 (73.45%), Postives = 141/177 (79.66%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSV 149 LYDDLL+NYNRLIRPV NNTEKLT KW DYKL WKPE+YGGV+ LYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGE++WKPPAIYKSSCKINVEWFPFDEQ+CDMKFGSWTYD FQ+DLKH+DQ +GSN+VK+GIDL EFY SV Sbjct: 30 LYDDLLSNYNRLIRPVSNNTEKLTVRLGLKLSQLIDVDLKNQVMTTNVWVEQKWLDYKLNWKPEEYGGVEMLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGEVVWKPPAIYKSSCKINVEWFPFDEQSCDMKFGSWTYDGFQVDLKHVDQEKGSNVVKVGIDLKEFYYSV 206 HSP 2 Score: 183.726 bits (465), Expect = 5.721e-53 Identity = 95/126 (75.40%), Postives = 104/126 (82.54%), Query Frame = 0 Query: 247 VTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEP-------------EDKLS-VIDGSCGSTT 358 VTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSI VTVGVLNIHFRSP+THRMSPW+RK+FI IMP++LLM RP YIPRYSAEP +D+ S ++G CG TT Sbjct: 206 VTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSICVTVGVLNIHFRSPATHRMSPWMRKIFIHIMPRMLLMTRPHYIPRYSAEPPLKSRSNDDLMYNQDQDSKKLNGHCGPTT 331
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. L. salmonis genes
Match: EMLSAG00000007263 (supercontig:LSalAtl2s:LSalAtl2s408:502144:561240:1 gene:EMLSAG00000007263 transcript:EMLSAT00000007263 description:"maker-LSalAtl2s408-augustus-gene-5.30") HSP 1 Score: 283.878 bits (725), Expect = 3.440e-88 Identity = 166/362 (45.86%), Postives = 216/362 (59.67%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLTK----------------------------WFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQ 334 L DL YN+LIRPV N T+K+ W DY+L+W DYGG+ L +P +W PDIVLFNNADG YEV + + GE++W PPAIY+SSC I+V +FPFD+QTC MKFGSWT+ Q+ L + K +DL++++ S WDI+ VPA N T L TE TDI+FY+T+RRKTLFYT NLI+P V ISFL VLVFYLP+++GEKVTL ISILLSL VF LL+++I+PPTSL +PL+ KYLLFT I+ T+SI VTV ++N +FR P TH M W+R +F++ +P +L M RP+ Sbjct: 30 LVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRFVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFTGDQVSLTLYNN-------KDYVDLSDYWKSGTWDIIEVPAYLNIHNDT---------------LPTE-----------------TDISFYITIRRKTLFYTVNLILPTVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVSILVTVVIINWNFRGPRTHSMPNWIRVLFLKYLPIVLFMRRPK 352 HSP 2 Score: 58.5362 bits (140), Expect = 2.808e-9 Identity = 28/83 (33.73%), Postives = 48/83 (57.83%), Query Frame = 0 Query: 461 KSSQKDDTETDGPRPLSQVAA--AFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYD 541 + +++ E DG A A + VEFIA+H++ D ++ EDWKF+AMV+D L++F + GT I++ AP +++ Sbjct: 543 RGGRRNSDEDDGSEAFLSPEAYRATQAVEFIAEHLRNEDEYLQIREDWKFVAMVVDXXQLYVFFXVTTVGTVGILMDAPHIFE 625
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. L. salmonis genes
Match: EMLSAG00000005313 (supercontig:LSalAtl2s:LSalAtl2s283:621537:765197:1 gene:EMLSAG00000005313 transcript:EMLSAT00000005313 description:"maker-LSalAtl2s283-snap-gene-6.12") HSP 1 Score: 272.707 bits (696), Expect = 2.229e-87 Identity = 154/319 (48.28%), Postives = 187/319 (58.62%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTE--------KLTK--------------------WFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTL 291 LYDDLL+NYN+L+RPV N T+ KL++ WFDYKLKW PE+YGGV L+VPS HIW PDIVL+NNADG +EVTL TKA L + G + WKPPAIYKSSC+I+VE+FPFDEQTC MKFGSWTYD FQ+DL+HM ++ G+N+V +GIDL+EFY+ R +YT + + LT +TFY+ PSDSGEKVTL ISIL SL VFFLL+ EIIPPTSL VPLLGKYL+F MILV++ Sbjct: 56 LYDDLLSNYNKLVRPVINTTDPLLVRIKLKLSQLIDVNLKNQIMTTNLWVEQYWFDYKLKWDPEEYGGVRQLHVPSDHIWRPDIVLYNNADGNFEVTLATKAXLWFNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHMCEVDGTNVVPLGIDLSEFYI------------RKTLFYTVNLIIPCMGI-----------------------SFLTVLTFYL------------------------------PSDSGEKVTLSISILTSLYVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSI 309
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. L. salmonis genes
Match: EMLSAG00000002955 (supercontig:LSalAtl2s:LSalAtl2s16:183923:308993:1 gene:EMLSAG00000002955 transcript:EMLSAT00000002955 description:"maker-LSalAtl2s16-augustus-gene-3.5") HSP 1 Score: 247.669 bits (631), Expect = 1.051e-78 Identity = 135/280 (48.21%), Postives = 170/280 (60.71%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLF-NNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCI 251 LYDDLL+NYN+L+ PV N +E +T W+DYKL+W P + H++ + LF +ADG +EVTL TKA L +G++ WKPPAIY SSC+++VE+FPFDEQTC MKFGSWTYD +Q+DL+H+D++ G V++G+DLTEFY+SVEWDIL VPA RN +YY + DITF +T+RRKTLFYT NLIIPC+GISFLTVLVFYLPSDSGEKV CI Sbjct: 32 LYDDLLSNYNKLVXPVVNVSEAVTVRLKLKLSQLIDVNLKNQIMTTNLWVEQYWYDYKLQWDPTE-----------NHVY--NFYLFPRSADGNFEVTLATKATLMASGKVEWKPPAIYHSSCEMDVEYFPFDEQTCVMKFGSWTYDGYQVDLRHIDEVMGKPEVEIGVDLTEFYMSVEWDILEVPAIRNVKYYX------------------------------CCXEPYLDITFNVTMRRKTLFYTVNLIIPCMGISFLTVLVFYLPSDSGEKVRRCI 268
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. L. salmonis genes
Match: EMLSAG00000007472 (supercontig:LSalAtl2s:LSalAtl2s429:150037:177030:-1 gene:EMLSAG00000007472 transcript:EMLSAT00000007472 description:"maker-LSalAtl2s429-augustus-gene-2.12") HSP 1 Score: 140.969 bits (354), Expect = 5.072e-37 Identity = 92/231 (39.83%), Postives = 131/231 (56.71%), Query Frame = 0 Query: 105 EQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYY--TPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERP 333 +Q D+K + + FQLDL D+ +G D++ F + EWD++ VP TR+E +Y P+ Y DITF + +RR+TL+Y NLI+PCV IS + +L F LP DSGEK+TL +++LLSLTVF ++++I+P TS AVPL+G Y M++V S+ +TV VLN H R+ TH M PW+R F+Q +P IL M RP Sbjct: 52 QQIIDVKLNN-EHRFFQLDLTLKDEGKGG-------DISSFIPNGEWDLIGVPGTRHELFYECCPEPY--------------------------------VDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTVLLSLTVFMNIVSQIMPTTSDAVPLIGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHDMPPWVRTAFLQWLPWILRMNRP 242
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. L. salmonis genes
Match: EMLSAG00000003136 (supercontig:LSalAtl2s:LSalAtl2s175:296544:305979:-1 gene:EMLSAG00000003136 transcript:EMLSAT00000003136 description:"maker-LSalAtl2s175-snap-gene-3.18") HSP 1 Score: 124.02 bits (310), Expect = 1.643e-31 Identity = 84/311 (27.01%), Postives = 131/311 (42.12%), Query Frame = 0 Query: 26 WFDYKLKWKPEDYGGVDTLYVPSQH--------------IWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQ 322 W D+ L W +Y ++ L +P++H +W PDI+L+N+A + L GE+ + PP I +S TC+ EW++L +PA R E+ Y D K K+ DIT+ + LRR+TL+Y N +PCV I+ + +L FY P +SGEK+TL I+IL+SLT F ++ ++ PP+S PL+G Y MI++ S+ ++ V+N H R M W R +F + Sbjct: 79 WKDHNLHWNRSEYPKIERLQIPTEHSIPKLERLQIPTEHVWTPDILLYNSASTAFNNFYHVNLLLSNEGEIRYMPPGIIQS--------------TCE----------------------------------------EWEVLGMPAIRTEDIY-----------------------------DCCKDKIFQDITYTIQLRRRTLYYLGNWTLPCVLIASMAILGFYFPPESGEKITLEITILMSLTFFMNMVTDMQPPSS-KTPLVGIYFSCIMIMIASSVICSILVINYHHRLTEYGDMPKWFRFIFFK 305
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. L. salmonis genes
Match: EMLSAG00000006524 (supercontig:LSalAtl2s:LSalAtl2s357:373959:378480:-1 gene:EMLSAG00000006524 transcript:EMLSAT00000006524 description:"augustus_masked-LSalAtl2s357-processed-gene-3.1") HSP 1 Score: 124.02 bits (310), Expect = 3.453e-30 Identity = 85/313 (27.16%), Postives = 144/313 (46.01%), Query Frame = 0 Query: 26 WFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGK-YEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVS-VEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSP-WLRKVFIQIMPKILLMERPQY 335 W D L W P DY + ++ IW PDI+ +NNA+ + T + +TG+++W PP K+ C+++++ +P D QTC +KFGSWT A Q+DL + + +V+ +FY EW +L +N Y + DITF ++R + Y +I+PC+ ++ F LPS+S EK+ L + ++ + A I+P S VP+L K+ T++L+ +I + V VLN+ H P +LR +F + K L ++ ++ Sbjct: 318 WIDEYLSWDPSDYENLTKIHFSEDEIWQPDILPYNNANPESLNPYHKTSFLVHHTGDVLWVPPVHLKAFCRLDLKMWPLDTQTCSLKFGSWTSHANQIDLA---LFKNATVVEK----IDFYTKDREWVVLNTTVVKNSVSYVEH------------------------------PDIYADITFSFNMKRISQSYKYVIILPCLVTMLMSTCSFGLPSNSHEKLFLNGIAFIVCVLYLVYFATILPFQSSTVPILVKFYSNTVVLIGAAIVINVIVLNM--TQVRKHVYPPKFLRIIFAGPLGKCLCLDHXRH 591
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. SwissProt
Match: gi|14286096|sp|P25162.3|ACH4_DROME (RecName: Full=Acetylcholine receptor subunit beta-like 2; AltName: Full=Nicotinic acetylcholine receptor beta 2; Flags: Precursor) HSP 1 Score: 471.855 bits (1213), Expect = 4.347e-161 Identity = 237/368 (64.40%), Postives = 277/368 (75.27%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQY-IPRY 339 LYDDLL+NYNRLIRPV NNTE LT +WFDYKL+W PE+YGGV+ LYVPS+HIW+PDIVL+NN DG YEVTLMTKA LKYTGE+ W+PPAIYKSSC++NVE+FP+DEQ C MKFGSWTY+ Q+DLKH+DQ+ GSN+V++GIDLTEFY+SVEWDIL VPAT+NEEYY P + +DITF +T+RRKTLFYT NLI+PCV ++FLTVLVFYLPSDSGEKVTLCISIL+SLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILV+LS+ TV VLNIHFRSPSTH MSP +RK+F+ MPK+++M R QY +P Y Sbjct: 33 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVNLKNQVMTTNLWVKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYNNWDGNYEVTLMTKATLKYTGEVFWEPPAIYKSSCEMNVEYFPYDEQICFMKFGSWTYNGAQVDLKHLDQIPGSNLVQVGIDLTEFYLSVEWDILEVPATKNEEYY-PDTLEP-----------------------------FSDITFKLTMRRKTLFYTVNLIVPCVALTFLTVLVFYLPSDSGEKVTLCISILVSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVSLSVWTTVCVLNIHFRSPSTHNMSPLVRKLFLHFMPKLMMMRRTQYTLPDY 370 HSP 2 Score: 92.8189 bits (229), Expect = 9.131e-19 Identity = 43/78 (55.13%), Postives = 58/78 (74.36%), Query Frame = 0 Query: 467 DTETDGPRPLS-QVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMR 543 D++ PR L+ +V A + V FIAQHIK AD+D E++EDWKF++MVLDR FL++FT C+ GT II ++PSLYD R Sbjct: 413 DSDNVIPRNLTPEVLQALRAVRFIAQHIKDADKDNEIVEDWKFVSMVLDRFFLWLFTLSCVFGTLAIICQSPSLYDTR 490
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. SwissProt
Match: gi|30581035|sp|P09478.2|ACH1_DROME (RecName: Full=Acetylcholine receptor subunit alpha-like 1; AltName: Full=Nicotinic acetylcholine receptor alpha 1; Flags: Precursor) HSP 1 Score: 446.432 bits (1147), Expect = 1.494e-150 Identity = 221/358 (61.73%), Postives = 270/358 (75.42%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLM 330 LYDDLL+NYNRLIRPV NN+++LT +W DYKLKW P+DYGGVDTL+VPS+HIWLPDIVL+NNADG YEVT+MTKA L +TG+++WKPPAIYKS C+I+VE+FPFDEQTC MKFGSWTYD + +DL+H+ Q S+ +++GIDL ++Y+SVEWDI+ VPA RNE++Y+ EE L DI F +TLRRKTLFYT NLIIPCVGISFL+VLVFYLPSDSGEK++LCISILLSLTVFFLLLAEIIPPTSL VPLLGKYLLFTM+LVTLS+ VT+ VLN++FRSP THRM+PW++++FIQI+PK+L + Sbjct: 28 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYMVDLRHLKQTADSDNIEVGIDLQDYYISVEWDIMRVPAVRNEKFYS---CCEEPYL---------------------------DIVFNLTLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKISLCISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAVLNVNFRSPVTHRMAPWVQRLFIQILPKLLCI 355 HSP 2 Score: 78.9518 bits (193), Expect = 2.804e-14 Identity = 35/64 (54.69%), Postives = 47/64 (73.44%), Query Frame = 0 Query: 478 QVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYD 541 ++ +G FIAQH+K D+ V EDWK++AMVLDR+FL+IF C+ GT+ IIL+APSLYD Sbjct: 476 EMEKTIEGSRFIAQHVKNKDKFESVEEDWKYVAMVLDRMFLWIFAIACVVGTALIILQAPSLYD 539
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. SwissProt
Match: gi|113054|sp|P17644.1|ACH2_DROME (RecName: Full=Acetylcholine receptor subunit alpha-like 2; AltName: Full=Nicotinic acetylcholine receptor alpha 2; Flags: Precursor) HSP 1 Score: 438.728 bits (1127), Expect = 1.872e-147 Identity = 259/570 (45.44%), Postives = 329/570 (57.72%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGS-NIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLSQVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYD 541 LYDDLL+NYNRLIRPV NNT+ + +W D+K KW P +YGGV LYVPS+HIWLPDIVL+NNADG+Y VT MTKA L YTG+++W PPAI+KSSC+I+V +FPFD+QTC MKFGSWTYD Q+DLKH+ Q N V++GIDL E+Y SVEWDIL VPA R+E+YY ++ DI F +TLRRKTLFYT NLIIPCVGIS+L+VLVFYLP+DSGEK+ LCISILLS T+FFLL++EIIP TSLA+PLLGKYLLFTM+LV LS+ +T+ +LNIH+R PSTH+M PW+R FI+ +PK+LLM P+ + R A +K++ G S T F + + G D R + V + G + +VTT T P+ S L DD LS D P ++ A V FI H+++ D +DW F+AMV+DR+FL++F L GT I+ APSLYD Sbjct: 48 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNADGEYVVTTMTKAILHYTGKVVWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGDQIDLKHISQKNDKDNKVEIGIDLREYYPSVEWDILGVPAERHEKYY------------------------------PCCAEPYPDIFFNITLRRKTLFYTVNLIIPCVGISYLSVLVFYLPADSGEKIALCISILLSQTMFFLLISEIIPSTSLALPLLGKYLLFTMLLVGLSVVITIIILNIHYRKPSTHKMRPWIRSFFIKRLPKLLLMRVPKDLLRDLA--ANKINY--GLKFSKTKFGQALMDEMQMNSGGSSPDSLRRM-----------QGRVGAGGC--------NGMHVTTATNRFSGLVGALGGGLSTLSGYNGLPSVLSGL--DDSLS---------DVAARKKYPF-ELEKAIHNVMFIQHHMQRQDEFNAEDQDWGFVAMVMDRLFLWLFMIASLVGTFVILGEAPSLYD 552
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. SwissProt
Match: gi|2492618|sp|P91766.1|ACH1_MANSE (RecName: Full=Acetylcholine receptor subunit alpha-like; AltName: Full=MARA1; Flags: Precursor) HSP 1 Score: 432.18 bits (1110), Expect = 1.123e-145 Identity = 228/389 (58.61%), Postives = 278/389 (71.47%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFE 361 LYDDLL+NYN+L+RPV N ++ LT W+DYKL W+P +YGGV+ L+VPS HIW PDIVL+NNADG +EVTL TKA L YTG + W+PPAIYKSSC+I+VE+FPFD+QTC MKFGSWTYD FQ+DL+H+D++RG+N+V++G+DL+EFY SVEWDIL VPA RNE++YT DE DITF +T+RRKTLFYT NLIIPC+GISFLTVLVFYLPSDSGEKV+L ISILLSLTVFFLLLAEIIPPTSL VPLLGK++LFTMIL T SI VTV VLN+HFRSP TH MSPW+R+VFI ++P++L+M RP Y R ++ G+ G TTL++ Sbjct: 28 LYDDLLSNYNKLVRPVLNVSDALTVRIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLSWEPREYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDQQTCVMKFGSWTYDGFQVDLRHIDEVRGTNVVELGVDLSEFYTSVEWDILEVPAVRNEKFYTCC--------------------------DEP----YLDITFNITMRRKTLFYTVNLIIPCMGISFLTVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNVHFRSPQTHTMSPWVRRVFIHVLPRLLVMRRPHY--RLDPHRSRFAGLVTGA-GETTLWD 383 HSP 2 Score: 68.1662 bits (165), Expect = 6.937e-11 Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 0 Query: 482 AFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMR 543 A G+ +IA +K + V EDWK++AMVLDR FL+IFT + G++ IIL+AP+LYD R Sbjct: 432 AIDGINYIADQTRKEEESTRVKEDWKYVAMVLDRPFLWIFTLAVVVGSAGIILQAPTLYDER 493
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. SwissProt
Match: gi|113050|sp|P23414.1|ACH1_SCHGR (RecName: Full=Acetylcholine receptor subunit alpha-L1; Flags: Precursor) HSP 1 Score: 415.616 bits (1067), Expect = 1.193e-138 Identity = 207/362 (57.18%), Postives = 258/362 (71.27%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQ 334 LYDDLL+NYNRLIRPV NNT+ + +W D+K +W P +YGGV LYVPS+HIWLPDIVL+NNADG+Y VT MTKA L +TG+++W PPAI+KSSC+I+V +FPFD+QTC MKFGSWTYD Q+DLKH++Q N VK+GIDL E+Y SVEWDIL VPA R+E+YY ++ DI F +TLRRKTLFYT NLI+PCVGIS+L+VLVFYLP+DSGEK+ LCISILLS T+FFLL++EIIP TSLA+PLLGKYLLFTM+LV LS+ +T+ VLN+H+R PSTH+M+PW+RKVFI+ +PK+LLM P+ Sbjct: 30 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFRWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYVVTTMTKAVLHHTGKVVWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGDQIDLKHINQKYDDNKVKVGIDLREYYPSVEWDILGVPAERHEKYY------------------------------PCCAEPYPDIFFNITLRRKTLFYTVNLIVPCVGISYLSVLVFYLPADSGEKIALCISILLSQTMFFLLISEIIPSTSLALPLLGKYLLFTMVLVGLSVVITIMVLNVHYRKPSTHKMAPWVRKVFIRRLPKLLLMRVPE 361 HSP 2 Score: 59.3066 bits (142), Expect = 4.179e-8 Identity = 28/64 (43.75%), Postives = 40/64 (62.50%), Query Frame = 0 Query: 478 QVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYD 541 ++ A V FI H+++ D +DW F+AMVLDR+FL+IFT + GT I+ AP+LYD Sbjct: 471 ELEKAIHNVLFIQNHMQRQDEFDAEDQDWGFVAMVLDRLFLWIFTIASIVGTFAILCEAPALYD 534
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. SwissProt
Match: gi|254763435|sp|P32297.4|ACHA3_HUMAN (RecName: Full=Neuronal acetylcholine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 363.229 bits (931), Expect = 5.725e-119 Identity = 211/563 (37.48%), Postives = 301/563 (53.46%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTE-----------KLTK-----------------WFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLSQVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILR 535 L++ L +YN +IRPV N ++ +L K W DYKLKW P DYGG + + VP+Q IW PDIVL+NNA G ++V TKA LKYTGE+ W PPAI+KSSCKI+V +FPFD Q C MKFGSW+YD ++DL L GS++ +L +++ S EW I+ P +++ Y ++ DIT+ + +RR LFYT NLIIPC+ ISFLTVLVFYLPSD GEKVTLCIS+LLSLTVF L++ E IP TSL +PL+G+YLLFTMI VTLSI +TV VLN+H+R+P+TH M W++ VF+ ++P+++ M RP + +P P+ + L +C SR +D + + HH S++S + S S D VLS+ + S ++ A + V++IA+++K + +E+ +DWK++AMV+DRIFL++FT +C+ GT+ + L+ Sbjct: 38 LFERLFEDYNEIIRPVANVSDPVIIHFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL----VLIGSSM-----NLKDYWESGEWAIIKAPGYKHDIKYN------------------------------CCEEIYPDITYSLYIRRLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPTTHTMPSWVKTVFLNLLPRVMFMTRPTSNEGNAQKPR---------------------PLYGAELSNL--NCFSRAESKGCKEGYPCQDGMCG---------------------------YCHHRRIKISNFSANLTRSSSSESVDAVLSLSALS--------------PEIKEAIQSVKYIAENMKAQNEAKEIQDDWKYVAMVIDRIFLWVFTLVCILGTAGLFLQ 497
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. SwissProt
Match: gi|113061|sp|P04757.1|ACHA3_RAT (RecName: Full=Neuronal acetylcholine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 359.762 bits (922), Expect = 1.087e-117 Identity = 213/563 (37.83%), Postives = 299/563 (53.11%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPN-----------NTEKLTK-----------------WFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLSQVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILR 535 L+ L +YN +IRPV N + +L K W DYKLKWKP DY GV+ + VP++ IW PDIVL+NNADG ++V TKA LKYTGE+ W PPAI+KSSCKI+V +FPFD Q C MKFGSW+YD ++DL L GS++ +L +++ S EW I+ P ++E Y ++ DIT+ + +RR LFYT NLIIPC+ ISFLTVLVFYLPSD GEKVTLCIS+LLSLTVF L++ E IP TSL +PL+G+YLLFTMI VTLSI +TV VLN+H+R+P+TH M W++ VF+ ++P+++ M RP S E G T F + +C SR + +D + HH S++S + S S + VLS+ + S ++ A + V++IA+++K + +E+ +DWK++AMV+DRIFL++F +C+ GT+ + L+ Sbjct: 32 LFQYLFEDYNEIIRPVANVSHPVIIQFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWKPSDYQGVEFMRVPAEKIWKPDIVLYNNADGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL----VLIGSSM-----NLKDYWESGEWAIIKAPGYKHEIKY------------------------------NCCEEIYQDITYSLYIRRLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPTTHTMPTWVKAVFLNLLPRVMFMTRPT-----SGE---------GDTPKTRTFYGAELSNL---------NCFSRADSKSCKEGYPCQDGTCG---------------------------YCHHRRVKISNFSANLTRSSSSESVNAVLSLSALS--------------PEIKEAIQSVKYIAENMKAQNVAKEIQDDWKYVAMVIDRIFLWVFILVCILGTAGLFLQ 491
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. SwissProt
Match: gi|584718|sp|Q07263.1|ACHA3_BOVIN (RecName: Full=Neuronal acetylcholine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 356.681 bits (914), Expect = 1.825e-116 Identity = 207/563 (36.77%), Postives = 298/563 (52.93%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTE-----------KLTK-----------------WFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLSQVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILR 535 L++ L +YN +IRPV N ++ +L K W DYKLKW P DY G + + VP++ IW PDIVL+NNA G ++V TKA LKYTGE+ W PPAI+KSSCKI+V +FPFD Q C MKFGSW+YD ++DL L GS++ +L +++ S EW I+ P +++ Y ++ DIT+ + +RR LFYT NLIIPC+ ISFLTVLVFYLPSD GEKVTLCIS+LLSLTVF L++ E IP TSL +PL+G+YLLFTMI VTLSI +TV VLN+H+R+P+TH M W++ +F+ ++P+++ M RP + P P + + L +C SR +D + + HH S++S + S S D VLS+ + S ++ A + V++IA+++K + +E+ +DWK++AMV+DRIFL++F +C+ GT+ + L+ Sbjct: 28 LFERLFEDYNEIIRPVANVSDPVIIQFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWNPSDYDGAEFMRVPAEKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL----VLIGSSM-----NLKDYWESGEWAIIKAPGYKHDIKYN------------------------------CCEEIYPDITYSLYIRRLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPTTHTMPAWVKTIFLNLLPRVMFMTRPASNEGNTQRPR---------------------PFYSAELSNL--NCFSRIESKVCKEGYPCQDGLCG---------------------------YCHHRRAKISNFSANLTRSSSSESVDAVLSLSALS--------------PEIKEAIQSVKYIAENMKAQNEAKEIQDDWKYVAMVIDRIFLWVFILVCILGTAGLFLQ 487
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. SwissProt
Match: gi|62901487|sp|Q8R4G9.1|ACHA3_MOUSE (RecName: Full=Neuronal acetylcholine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 356.295 bits (913), Expect = 2.399e-116 Identity = 214/563 (38.01%), Postives = 301/563 (53.46%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPN-----------NTEKLTK-----------------WFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLSQVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILR 535 L+ L +YN +IRPV N + +L K W DYKLKWKP DY GV+ + VP++ IW PDIVL+NNADG ++V TKA LKYTGE+ W PPAI+KSSCKI+V +FPFD Q C MKFGSW+YD ++DL L GS++ +L +++ S EW I+ P ++E Y ++ DIT+ + +RR LFYT NLIIPC+ ISFLTVLVFYLPSD GEKVTLCIS+LLSLTVF L++ E IP TSL +PL+G+YLLFTMI VTLSI +TV VLN+H+R+P+TH M W++ VF+ ++P+++ M RP ++ ED T F + +C SR + +D T + HH S++S + S S D VLS+ + S ++ A + V++IA+++K + +E+ +DWK++AMV+DRIFL++F +C+ GT+ + L+ Sbjct: 32 LFQYLFEDYNEIIRPVANVSHPVIIQFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWKPSDYQGVEFMRVPAEKIWKPDIVLYNNADGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL----VLIGSSM-----NLKDYWESGEWAIIKAPGYKHEIKY------------------------------NCCEEIYQDITYSLYIRRLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPTTHTMPTWVKAVFLNLLPRVMFMTRP------TSTEEDA--------PKTRNFYGAELSNL---------NCFSRADSKSCKEGYPCQDG----------------------TCGYCHH-----RRVKISNFSANLTRSSSSESVDAVLSLSALS--------------PEIKEAIQSVKYIAENMKAQNVAKEIQDDWKYVAMVIDRIFLWVFILVCILGTAGLFLQ 491
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. SwissProt
Match: gi|75023400|sp|Q9N587.2|ACH6_CAEEL (RecName: Full=Acetylcholine receptor subunit alpha-type unc-63; AltName: Full=Levamisole-resistant protein 7; AltName: Full=Uncoordinated protein 63; Flags: Precursor) HSP 1 Score: 352.829 bits (904), Expect = 6.319e-115 Identity = 195/392 (49.74%), Postives = 247/392 (63.01%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQ---------LRGSN--------IVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKL 347 L++DL+A+YN+L+RPV N E L W DYKL+W P +YGGV+ LYVPS IWLPD+VL+NNADG Y+VT+MTKA+L Y G + W PPAIYKS C+I+VE+FPFD Q C+MKFGSWTY ++DL+H D+ + G + +V GIDL+++Y SVEWDIL VP R+ + Y DIT+ + LRRKTLFYT NLI P VGISFLT LVFYLPSD GEK++LCISIL+SLTVFFLLL EIIP TSL +PL+GKYLLFTM+LVTLS+ VTV LN+H+RSP+TH M W++++F+ +PK LLM RPQ P + ++P K Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLRWDPVEYGGVEVLYVPSDTIWLPDVVLYNNADGNYQVTIMTKAKLTYNGTVEWAPPAIYKSMCQIDVEFFPFDRQQCEMKFGSWTYGGLEVDLQHRDKHLEKEIEEDVEGVDGPTKEIVWVVDRGIDLSDYYPSVEWDILNVPGKRHSKRY------------------------------PCCESPFIDITYEIHLRRKTLFYTVNLIFPSVGISFLTALVFYLPSDGGEKISLCISILISLTVFFLLLVEIIPSTSLVIPLIGKYLLFTMVLVTLSVVVTVVTLNVHYRSPTTHTMPKWMKRLFVDFLPKYLLMTRPQ-PPGHHSKPNRKF 390 HSP 2 Score: 88.5817 bits (218), Expect = 2.109e-17 Identity = 47/121 (38.84%), Postives = 67/121 (55.37%), Query Frame = 0 Query: 427 HHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLSQVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMRPSLG 547 HH + S S L + L +S ++++ PR S V +A + V +IA H+K + D++VIEDWK+I++V+DRIFL FTF C GT II RAPS+YD P+L Sbjct: 382 HHSKPNRKFDSRASTFSIGVNHVLGQNSELLSPGLNSNREESSFTLPRDNSPVRSAVESVAYIADHLKNEEDDKQVIEDWKYISVVMDRIFLITFTFACAFGTVVIIARAPSIYDNTPALA 502
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. nr
Match: gi|1000723081|ref|XP_015610090.1| (PREDICTED: acetylcholine receptor subunit beta-like 2 isoform X2 [Cephus cinctus]) HSP 1 Score: 511.531 bits (1316), Expect = 4.867e-174 Identity = 296/571 (51.84%), Postives = 354/571 (62.00%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLSQVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMR 543 LYDDLL+NYNRLIRPV NNTE LT KWFDYKL+W P +YGG++ LYVPS++IWLPDIVL+NNADG YEVTLMTKA LKYTGE+ WKPPAIYKSSC+INVE+FPFDEQ+C MKFGSWTY+ Q+DLKHM+Q+ GSN+V +GIDL++FY+SVEWDIL VPA RNEEYY ++ +DITF +T+RRKTLFYT NLIIPCVGI+FLTVLVFYLPSDSGEKV+LC SILLSLTVFFLLLAEIIPPTSLA+PLLGKYLLFTMILVTLSI +TV VLN+HFRSPSTH MSPW+++VF+ MP+IL+M R Y + PE + +D + F RD V+ + + SP +VT+ H H H + + P SP +V+S +G R ++Q HIK AD+D EVIEDWKF+AMVLDR FL++FT C GGT II +APSLYD R Sbjct: 33 LYDDLLSNYNRLIRPVINNTETLTVWLGLKLSQLIEMNLKNQVMTTNVWVEQKWFDYKLRWDPNEYGGIEMLYVPSENIWLPDIVLYNNADGNYEVTLMTKATLKYTGEVAWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVDLKHMEQVAGSNLVPVGIDLSDFYLSVEWDILEVPAARNEEYY------------------------------PCCTEPYSDITFNITMRRKTLFYTVNLIIPCVGITFLTVLVFYLPSDSGEKVSLCSSILLSLTVFFLLLAEIIPPTSLAIPLLGKYLLFTMILVTLSIWITVCVLNVHFRSPSTHNMSPWVKQVFLNWMPRILMMRRTPY-----STPEYDDTYMDSGYTNEVDFS--------------------------------FRDSVSDYPSEL-KGSPDGFESVTSAYKSIRDDEHRHMPHASITDSENTMPRHLSP----EVMS-----------ALEGVRFIAQ-------------HIKDADKDNEVIEDWKFVAMVLDRFFLWVFTIACFGGTLGIICQAPSLYDTR 507
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. nr
Match: gi|1067072221|ref|XP_018019541.1| (PREDICTED: acetylcholine receptor subunit beta-like 2 [Hyalella azteca]) HSP 1 Score: 508.449 bits (1308), Expect = 4.457e-173 Identity = 289/571 (50.61%), Postives = 342/571 (59.89%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLSQVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMR 543 LYDDLL+NYNRLIRPV NNT+ LT KW DYKL+W PE+YGGV+ LYVPS+HIWLPDIVL+NNADG YEVTLMTKA LKYTGE+ WKPPAIYKSSCKI+VE+FPFDEQ+C MKFGSWTYD + +DLKHMDQ GSN V++GIDL EFY+SVEWDIL VPA RN+EY+ GV++ DITFY+T+RRKTLFYT NLIIPCVGISFLTVLVFYLPSDSGEKV LCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSI VTVGVLNIHFRSPSTH+MSPW++++FI IMP +LLM+RP ++ E LSV+ + ST H R ++ + + + F S H H +YSP Q ++ ++ K + +DD +V +K V + LDR+FL++F C+ GT IIL+APSLYD R Sbjct: 35 LYDDLLSNYNRLIRPVANNTDILTVRLGLKLSQLIGVNLKNQIMTSNVWVVQKWHDYKLRWDPEEYGGVEMLYVPSEHIWLPDIVLYNNADGNYEVTLMTKATLKYTGEVNWKPPAIYKSSCKIDVEYFPFDEQSCIMKFGSWTYDGYMVDLKHMDQKSGSNTVRVGIDLKEFYMSVEWDILEVPAERNQEYFP----------------------GVEEP--------YPDITFYLTMRRKTLFYTVNLIIPCVGISFLTVLVFYLPSDSGEKVALCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSICVTVGVLNIHFRSPSTHKMSPWVKRIFIHIMPSLLLMKRP-----HNDADEGNLSVLKLATCST---------------------------HSDDLRDSIGDFSAGDHEIGMKFGDDFLDSKC----------EMGGCHFHGQKNYSPE---VQKAIEGVQFIAQHIKDADRDD----------EVVQDWKYVAMV-----------------------LDRLFLWVFFVACVAGTCGIILQAPSLYDTR 497
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. nr
Match: gi|1325327833|ref|XP_023345769.1| (acetylcholine receptor subunit beta-like 2 [Eurytemora affinis]) HSP 1 Score: 506.138 bits (1302), Expect = 1.308e-171 Identity = 254/394 (64.47%), Postives = 295/394 (74.87%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRN-EEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDK------LSVIDGSCGSTTL 359 LYDDLL NYNRLIRPV N T+ L W DYKL+W PE+YGGV+TLYVPS+ IWLPDIVL+NNADG YEV LMTKA LKYTG + W PPAIYKSSC+INVEWFPFDEQ CDMKFGSWTYD Q+DLKHM+Q G+N+V +GIDL+EFY+SVEWDIL VPAT+N E Y +R Q E S +D + KLLTDITF +T+RRKTLFYT NLIIPCVGISFLTVLVFYLPSDSGEKVTLCI+ILLSLTVFFLLLAEIIPPTSLAVPLLGKYL+FTM+LVT SI VTVG+LNIHFR+P+TH+M W++++F+QI+PKIL+M RPQYIPRYS E +D ++ ID +C +T + Sbjct: 23 LYDDLLHNYNRLIRPVSNFTDTLVVRLGLKLSQLIDVDLKNQVMTTNVWVDQTWMDYKLRWDPEEYGGVETLYVPSERIWLPDIVLYNNADGTYEVRLMTKAELKYTGHVKWTPPAIYKSSCQINVEWFPFDEQNCDMKFGSWTYDGNQVDLKHMNQEPGNNVVAIGIDLSEFYLSVEWDILEVPATKNIENYEEMEREQHESS----------------SAEDLNPDKLLTDITFMLTMRRKTLFYTVNLIIPCVGISFLTVLVFYLPSDSGEKVTLCINILLSLTVFFLLLAEIIPPTSLAVPLLGKYLVFTMLLVTFSICVTVGILNIHFRTPATHKMPNWMKEIFLQILPKILMMRRPQYIPRYSMEFDDSSPKKEPINCIDNNCKATQV 400 HSP 2 Score: 98.2117 bits (243), Expect = 5.509e-18 Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 0 Query: 478 QVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMR 543 +V A KGV+FIAQHI+K D D EVIEDWK+IAMVLDR+FL++FT C+ G+ IIL APSLYDMR Sbjct: 470 EVELALKGVQFIAQHIRKNDEDIEVIEDWKYIAMVLDRLFLWLFTATCIMGSGGIILMAPSLYDMR 535
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. nr
Match: gi|1316188486|ref|XP_023240041.1| (acetylcholine receptor subunit alpha-like isoform X2 [Centruroides sculpturatus]) HSP 1 Score: 500.745 bits (1288), Expect = 3.756e-171 Identity = 270/518 (52.12%), Postives = 329/518 (63.51%), Query Frame = 0 Query: 26 WFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLSQVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMR 543 W DYKL W P DYGGV+ ++VP++HIWLPDIVLFNNADG YEVTLMTKA + YTG+++WKPPA+YKS+C+I+VE+FPFDEQ+C MKFGSWTYD +++DL+H+ Q G+N V MGIDL+E Y SVEWDIL VPA NEEYY D DE DITF +T+RRKTLFYT NLIIPCVGISFLTVLVFYLPSDSGEKVTLCISIL+SLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSI VTVGVLNIHFRSPSTH+MSPW+R+VFI IMP++LLM RP + EDKL+ G +C G++ R + R R+ + + + + ++ + H H+ HH SP ++ A + + FIA+HI+K D ++ IEDWK++AMVLDR+FL+IFT L GT I+L+APSLYD R Sbjct: 18 WDDYKLHWTPSDYGGVEMIHVPAEHIWLPDIVLFNNADGNYEVTLMTKATVHYTGKIVWKPPALYKSTCEIDVEYFPFDEQSCIMKFGSWTYDGYEVDLQHVKQEPGTNTVAMGIDLSELYKSVEWDILLVPAKYNEEYY--------------------------DCCDEPYP----DITFNITMRRKTLFYTVNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILVSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSIAVTVGVLNIHFRSPSTHKMSPWVRRVFIHIMPRLLLMRRPLH------TTEDKLTEPPKFAGR--------------NCNGME------IRRDSFVRMQAERNTPPPDALHVDYRMRAGREDLVRENAENTDHAHYRHH-------SP------------------------------------EIQKAIESILFIAEHIRKEDEEQSEIEDWKYVAMVLDRLFLWIFTIASLVGTCGILLQAPSLYDDR 436
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. nr
Match: gi|1061472674|gb|ODM91301.1| (Acetylcholine receptor subunit beta-like 2 [Orchesella cincta]) HSP 1 Score: 502.671 bits (1293), Expect = 1.108e-170 Identity = 249/372 (66.94%), Postives = 282/372 (75.81%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPE 344 LYDDLL+NYNRLIRPV NN+EKLT KW DYKL+W PE+YGGV+ LYVPS+HIWLPDIVL+NNADG YEVTLMTKA L GE++WKPPAIYKSSC+INVEWFPFDEQ+C MKFGSWTYD FQ+DL+HM+Q GSN+V +GIDL EFY+SVEWDIL VPA RNEEYY + DITF +T+RRKTLFYT NLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTM+LVTLSI VTVGVLN+HFRSPSTH+MSPW++KVF++ MP++L M+RP+Y PRY+ E + Sbjct: 25 LYDDLLSNYNRLIRPVSNNSEKLTVKLGLKLSQLIDVNLKSQIMTTNVWVEQKWTDYKLQWIPEEYGGVEQLYVPSEHIWLPDIVLYNNADGNYEVTLMTKATLHSNGEIVWKPPAIYKSSCEINVEWFPFDEQSCAMKFGSWTYDGFQVDLQHMEQTAGSNLVSIGIDLKEFYLSVEWDILEVPARRNEEYY------------------------------PCCQEPYPDITFNLTMRRKTLFYTVNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMVLVTLSIMVTVGVLNVHFRSPSTHKMSPWVKKVFLEFMPRVLCMKRPEYHPRYAFESD 366 HSP 2 Score: 95.1301 bits (235), Expect = 5.795e-17 Identity = 50/107 (46.73%), Postives = 63/107 (58.88%), Query Frame = 0 Query: 437 SHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLSQVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMR 543 S+Y SP S + V S S P +V AA + V+FIAQHIK D+D EVIEDWK++AMVLDR FL++FT C+ GT I+ +APSLYD R Sbjct: 393 SYYDSSPRTESSVDQSRHVKSFSDDSGDLGMNRQYSP----EVLAALQSVQFIAQHIKDEDKDNEVIEDWKYVAMVLDRFFLWVFTLACILGTCGILFQAPSLYDTR 495 The following BLAST results are available for this feature:
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 20
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BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold99_size374999:23338..30515- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold99_size374999-snap-gene-0.24 ID=maker-scaffold99_size374999-snap-gene-0.24|Name=nicotinic acetylcholine receptor alpha8 variant d|organism=Tigriopus kingsejongensis|type=gene|length=7178bp|location=Sequence derived from alignment at scaffold99_size374999:23338..30515- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nicotinic acetylcholine receptor alpha8 variant d' has the following synonyms
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