nicotinic acetylcholine receptor alpha8 variant d, maker-scaffold99_size374999-snap-gene-0.24 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. L. salmonis genes
Match: EMLSAG00000007737 (supercontig:LSalAtl2s:LSalAtl2s44:961763:992679:1 gene:EMLSAG00000007737 transcript:EMLSAT00000007737 description:"maker-LSalAtl2s44-augustus-gene-10.10") HSP 1 Score: 115.161 bits (287), Expect = 9.477e-28 Identity = 80/253 (31.62%), Postives = 119/253 (47.04%), Query Frame = 0 Query: 143 TEFYVSVEWDILAVPATRNEEYY--TPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFT-----------------------------------------MILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERP-QYIPRYSAEPEDKLSVID 351 + + ++ EW +L VP RNE +Y P+ Y D+TF + +RR+TL+Y NLI+PCV I+ + VL F LP DSGEK++L +++LLSLTVF ++E +P TSL VPLLG +L + M +V S+ T+ +LN H R TH M W+R VF+Q +P +L M RP + I R + ++K+ +D Sbjct: 83 STYVLNGEWALLGVPGKRNEVFYDCCPEPY--------------------------------LDVTFVIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTVLLSLTVFQQNVSEAMPVTSLQVPLLGFTILLSLTVFSQVVSESMPATSDALPLLVTFFLFHAYISKGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPNWVRCVFLQWIPWVLRMGRPGEKITRKTILMQNKMKELD 303
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. L. salmonis genes
Match: EMLSAG00000001199 (supercontig:LSalAtl2s:LSalAtl2s119:5078:7517:-1 gene:EMLSAG00000001199 transcript:EMLSAT00000001199 description:"maker-LSalAtl2s119-snap-gene-0.6") HSP 1 Score: 101.293 bits (251), Expect = 1.117e-23 Identity = 97/364 (26.65%), Postives = 157/364 (43.13%), Query Frame = 0 Query: 204 DITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLME-----RPQYIPRYSAEPEDKLSVIDGSCGS-----TTLFESQHF--------PMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLSQVAAAFKGVEFIAQHIKKADRD------REVIE-DWKFIAMVLDRIFLFIFTFLCLGGTSWIIL-RAPSLYD 541 DITF + +RR+ LFY NLI+PCV I+ + +LVFY+PS+SGEKVTL IS LLS+TVF + + E + Y ++ LV+ + + LNIH R + + P ++ + + + K+ + + + IP + +GS G+ TL S P + P G++ C + +H +R + S VA + F + F Q N S PP P ++ F +E I+ I+KA+R +++IE WK +++++DR+ L +F FL + S +IL +P LYD Sbjct: 46 DITFTIIIRRRPLFYVFNLILPCVLINGIALLVFYVPSESGEKVTLGISALLSMTVFLMTIRESL------------YYGVSICLVSFASAMAXVTLNIHHRGIRGNEVPPSVKNIILNQLGKLFFFQFDSDTKERIIPPPHFGGSISSGINNGSAGAPEHSMMTLNRSATLSRPTQRADPYLVPS-HGMESTCWNNADNHIGSRRSFS---VAEDHPHFTEDGHFCQLN---------------------GGLSVPPPLPSEP----------------------------NISVNF--MERISASIEKAERRIAQSEHKDLIEAQWKQVSLIIDRLLLLVF-FLAMSIASLVILTSSPHLYD 341
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. L. salmonis genes
Match: EMLSAG00000002956 (supercontig:LSalAtl2s:LSalAtl2s16:329273:348776:1 gene:EMLSAG00000002956 transcript:EMLSAT00000002956 description:"maker-LSalAtl2s16-augustus-gene-3.6") HSP 1 Score: 74.7146 bits (182), Expect = 4.855e-17 Identity = 32/50 (64.00%), Postives = 41/50 (82.00%), Query Frame = 0 Query: 286 MILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQY 335 MIL T SI VTV VLN+HFR+P TH M+PW+R+VFI I+P++L+M RP Y Sbjct: 1 MILDTFSICVTVVVLNVHFRTPQTHTMAPWIRRVFIHILPRLLVMRRPHY 50
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. L. salmonis genes
Match: EMLSAG00000006143 (supercontig:LSalAtl2s:LSalAtl2s335:560568:612257:-1 gene:EMLSAG00000006143 transcript:EMLSAT00000006143 description:"maker-LSalAtl2s335-augustus-gene-5.8") HSP 1 Score: 72.0182 bits (175), Expect = 8.473e-15 Identity = 33/58 (56.90%), Postives = 43/58 (74.14%), Query Frame = 0 Query: 486 VEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMR 543 V FIA+H + + +V EDWK++AMVLDR+FL+IFT L GT+ II +APSLYD R Sbjct: 100 VNFIAEHTRAKEEATKVKEDWKYVAMVLDRLFLWIFTLAVLVGTAGIIXQAPSLYDDR 157
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. L. salmonis genes
Match: EMLSAG00000000486 (supercontig:LSalAtl2s:LSalAtl2s1075:141499:142154:-1 gene:EMLSAG00000000486 transcript:EMLSAT00000000486 description:"snap_masked-LSalAtl2s1075-processed-gene-0.7") HSP 1 Score: 69.3218 bits (168), Expect = 6.039e-14 Identity = 32/100 (32.00%), Postives = 55/100 (55.00%), Query Frame = 0 Query: 25 KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDL 124 +W D + KW PED+ +D++ +P +W P+++L N K+ +K G++I+ S+CK N E +PF QTC +KFGSW +++ + Sbjct: 88 RWNDQRYKWNPEDFEDIDSIELPFSKVWSPEVILLNARVEKF--IHRQIGIVKSNGDIIYLLSMHSSSNCKPNFEKYPFGIQTCALKFGSWRNQHYKVGV 185
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. L. salmonis genes
Match: EMLSAG00000002944 (supercontig:LSalAtl2s:LSalAtl2s168:826273:848707:-1 gene:EMLSAG00000002944 transcript:EMLSAT00000002944 description:"maker-LSalAtl2s168-snap-gene-7.7") HSP 1 Score: 67.0106 bits (162), Expect = 5.988e-13 Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 0 Query: 501 EVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMRPSL 546 VIEDWK++AMVLDR+FL+IFT L GT+ IIL+AP+LYD R L Sbjct: 142 NVIEDWKYVAMVLDRLFLWIFTVAVLVGTAGIILQAPTLYDDRQPL 187
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. L. salmonis genes
Match: EMLSAG00000009437 (supercontig:LSalAtl2s:LSalAtl2s603:238594:257708:1 gene:EMLSAG00000009437 transcript:EMLSAT00000009437 description:"snap_masked-LSalAtl2s603-processed-gene-2.4") HSP 1 Score: 57.3806 bits (137), Expect = 4.212e-10 Identity = 20/49 (40.82%), Postives = 34/49 (69.39%), Query Frame = 0 Query: 74 ARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQL 122 A +++ G + W PP ++S+C ++V +FPFD+Q C +K GSW +D F + Sbjct: 43 ALVEHNGLVFWPPPTKFRSTCPVDVAFFPFDDQICMLKLGSWIHDGFSI 91
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. L. salmonis genes
Match: EMLSAG00000009380 (supercontig:LSalAtl2s:LSalAtl2s59:537101:537984:-1 gene:EMLSAG00000009380 transcript:EMLSAT00000009380 description:"maker-LSalAtl2s59-snap-gene-5.30") HSP 1 Score: 58.151 bits (139), Expect = 1.271e-9 Identity = 32/104 (30.77%), Postives = 52/104 (50.00%), Query Frame = 0 Query: 26 WFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQ 129 W D++L+W E+ + L++ + IW PDIV + D + A L Y GE+I+ P + C W P+ E C +K+GSW++ LD ++ Q Sbjct: 80 WNDFRLRWD-EEARNIRDLHISKEIIWTPDIVPLS-GDVVETIDDRRSAILDYKGEIIFFPRVFLRGRCNGVDLWNPWKEFNCSLKYGSWSHTKEYLDFTNIVQ 181
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. L. salmonis genes
Match: EMLSAG00000008789 (supercontig:LSalAtl2s:LSalAtl2s546:116340:118829:1 gene:EMLSAG00000008789 transcript:EMLSAT00000008789 description:"maker-LSalAtl2s546-augustus-gene-1.9") HSP 1 Score: 53.5286 bits (127), Expect = 3.530e-8 Identity = 34/114 (29.82%), Postives = 56/114 (49.12%), Query Frame = 0 Query: 26 WFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDL-KHMDQLRGSNIVKM 138 W D +L W PED+ G++ L VP +W PDIV + D E+ A + G++++ P + C + C +K+GSWT+D ++L + D + S VK+ Sbjct: 75 WMDDRLVWTPEDHEGINQLRVPINKLWKPDIVPYIKKDIT-EIQEEFNAIVYSNGKILYVPDTKLRIDCDNANLTDVWAVNECTIKYGSWTFDNDMMELVQFKDPVDISEFVKL 187
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. L. salmonis genes
Match: EMLSAG00000003233 (supercontig:LSalAtl2s:LSalAtl2s178:159770:165601:1 gene:EMLSAG00000003233 transcript:EMLSAT00000003233 description:"augustus_masked-LSalAtl2s178-processed-gene-1.1") HSP 1 Score: 51.2174 bits (121), Expect = 2.264e-7 Identity = 33/104 (31.73%), Postives = 51/104 (49.04%), Query Frame = 0 Query: 26 WFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADG-----KYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDL 124 W+D +L W GV++L +P+ IW PDIV F DG KY V + G +++ P +K C + C+++FGSWTYD+ ++L Sbjct: 83 WYDPRLTWNSSS--GVESLSLPNDLIWKPDIVPFFGRDGTHYDSKYPVKVFP------NGMVLFVPSVEFKHRCFRQTKRSARKIIRCNVEFGSWTYDSEIMNL 178
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. SwissProt
Match: gi|14286096|sp|P25162.3|ACH4_DROME (RecName: Full=Acetylcholine receptor subunit beta-like 2; AltName: Full=Nicotinic acetylcholine receptor beta 2; Flags: Precursor) HSP 1 Score: 471.855 bits (1213), Expect = 4.347e-161 Identity = 237/368 (64.40%), Postives = 277/368 (75.27%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQY-IPRY 339 LYDDLL+NYNRLIRPV NNTE LT +WFDYKL+W PE+YGGV+ LYVPS+HIW+PDIVL+NN DG YEVTLMTKA LKYTGE+ W+PPAIYKSSC++NVE+FP+DEQ C MKFGSWTY+ Q+DLKH+DQ+ GSN+V++GIDLTEFY+SVEWDIL VPAT+NEEYY P + +DITF +T+RRKTLFYT NLI+PCV ++FLTVLVFYLPSDSGEKVTLCISIL+SLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILV+LS+ TV VLNIHFRSPSTH MSP +RK+F+ MPK+++M R QY +P Y Sbjct: 33 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVNLKNQVMTTNLWVKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYNNWDGNYEVTLMTKATLKYTGEVFWEPPAIYKSSCEMNVEYFPYDEQICFMKFGSWTYNGAQVDLKHLDQIPGSNLVQVGIDLTEFYLSVEWDILEVPATKNEEYY-PDTLEP-----------------------------FSDITFKLTMRRKTLFYTVNLIVPCVALTFLTVLVFYLPSDSGEKVTLCISILVSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVSLSVWTTVCVLNIHFRSPSTHNMSPLVRKLFLHFMPKLMMMRRTQYTLPDY 370 HSP 2 Score: 92.8189 bits (229), Expect = 9.131e-19 Identity = 43/78 (55.13%), Postives = 58/78 (74.36%), Query Frame = 0 Query: 467 DTETDGPRPLS-QVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMR 543 D++ PR L+ +V A + V FIAQHIK AD+D E++EDWKF++MVLDR FL++FT C+ GT II ++PSLYD R Sbjct: 413 DSDNVIPRNLTPEVLQALRAVRFIAQHIKDADKDNEIVEDWKFVSMVLDRFFLWLFTLSCVFGTLAIICQSPSLYDTR 490
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. SwissProt
Match: gi|30581035|sp|P09478.2|ACH1_DROME (RecName: Full=Acetylcholine receptor subunit alpha-like 1; AltName: Full=Nicotinic acetylcholine receptor alpha 1; Flags: Precursor) HSP 1 Score: 446.432 bits (1147), Expect = 1.494e-150 Identity = 221/358 (61.73%), Postives = 270/358 (75.42%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLM 330 LYDDLL+NYNRLIRPV NN+++LT +W DYKLKW P+DYGGVDTL+VPS+HIWLPDIVL+NNADG YEVT+MTKA L +TG+++WKPPAIYKS C+I+VE+FPFDEQTC MKFGSWTYD + +DL+H+ Q S+ +++GIDL ++Y+SVEWDI+ VPA RNE++Y+ EE L DI F +TLRRKTLFYT NLIIPCVGISFL+VLVFYLPSDSGEK++LCISILLSLTVFFLLLAEIIPPTSL VPLLGKYLLFTM+LVTLS+ VT+ VLN++FRSP THRM+PW++++FIQI+PK+L + Sbjct: 28 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYMVDLRHLKQTADSDNIEVGIDLQDYYISVEWDIMRVPAVRNEKFYS---CCEEPYL---------------------------DIVFNLTLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKISLCISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAVLNVNFRSPVTHRMAPWVQRLFIQILPKLLCI 355 HSP 2 Score: 78.9518 bits (193), Expect = 2.804e-14 Identity = 35/64 (54.69%), Postives = 47/64 (73.44%), Query Frame = 0 Query: 478 QVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYD 541 ++ +G FIAQH+K D+ V EDWK++AMVLDR+FL+IF C+ GT+ IIL+APSLYD Sbjct: 476 EMEKTIEGSRFIAQHVKNKDKFESVEEDWKYVAMVLDRMFLWIFAIACVVGTALIILQAPSLYD 539
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. SwissProt
Match: gi|113054|sp|P17644.1|ACH2_DROME (RecName: Full=Acetylcholine receptor subunit alpha-like 2; AltName: Full=Nicotinic acetylcholine receptor alpha 2; Flags: Precursor) HSP 1 Score: 438.728 bits (1127), Expect = 1.872e-147 Identity = 259/570 (45.44%), Postives = 329/570 (57.72%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGS-NIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLSQVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYD 541 LYDDLL+NYNRLIRPV NNT+ + +W D+K KW P +YGGV LYVPS+HIWLPDIVL+NNADG+Y VT MTKA L YTG+++W PPAI+KSSC+I+V +FPFD+QTC MKFGSWTYD Q+DLKH+ Q N V++GIDL E+Y SVEWDIL VPA R+E+YY ++ DI F +TLRRKTLFYT NLIIPCVGIS+L+VLVFYLP+DSGEK+ LCISILLS T+FFLL++EIIP TSLA+PLLGKYLLFTM+LV LS+ +T+ +LNIH+R PSTH+M PW+R FI+ +PK+LLM P+ + R A +K++ G S T F + + G D R + V + G + +VTT T P+ S L DD LS D P ++ A V FI H+++ D +DW F+AMV+DR+FL++F L GT I+ APSLYD Sbjct: 48 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNADGEYVVTTMTKAILHYTGKVVWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGDQIDLKHISQKNDKDNKVEIGIDLREYYPSVEWDILGVPAERHEKYY------------------------------PCCAEPYPDIFFNITLRRKTLFYTVNLIIPCVGISYLSVLVFYLPADSGEKIALCISILLSQTMFFLLISEIIPSTSLALPLLGKYLLFTMLLVGLSVVITIIILNIHYRKPSTHKMRPWIRSFFIKRLPKLLLMRVPKDLLRDLA--ANKINY--GLKFSKTKFGQALMDEMQMNSGGSSPDSLRRM-----------QGRVGAGGC--------NGMHVTTATNRFSGLVGALGGGLSTLSGYNGLPSVLSGL--DDSLS---------DVAARKKYPF-ELEKAIHNVMFIQHHMQRQDEFNAEDQDWGFVAMVMDRLFLWLFMIASLVGTFVILGEAPSLYD 552
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. SwissProt
Match: gi|2492618|sp|P91766.1|ACH1_MANSE (RecName: Full=Acetylcholine receptor subunit alpha-like; AltName: Full=MARA1; Flags: Precursor) HSP 1 Score: 432.18 bits (1110), Expect = 1.123e-145 Identity = 228/389 (58.61%), Postives = 278/389 (71.47%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFE 361 LYDDLL+NYN+L+RPV N ++ LT W+DYKL W+P +YGGV+ L+VPS HIW PDIVL+NNADG +EVTL TKA L YTG + W+PPAIYKSSC+I+VE+FPFD+QTC MKFGSWTYD FQ+DL+H+D++RG+N+V++G+DL+EFY SVEWDIL VPA RNE++YT DE DITF +T+RRKTLFYT NLIIPC+GISFLTVLVFYLPSDSGEKV+L ISILLSLTVFFLLLAEIIPPTSL VPLLGK++LFTMIL T SI VTV VLN+HFRSP TH MSPW+R+VFI ++P++L+M RP Y R ++ G+ G TTL++ Sbjct: 28 LYDDLLSNYNKLVRPVLNVSDALTVRIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLSWEPREYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDQQTCVMKFGSWTYDGFQVDLRHIDEVRGTNVVELGVDLSEFYTSVEWDILEVPAVRNEKFYTCC--------------------------DEP----YLDITFNITMRRKTLFYTVNLIIPCMGISFLTVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNVHFRSPQTHTMSPWVRRVFIHVLPRLLVMRRPHY--RLDPHRSRFAGLVTGA-GETTLWD 383 HSP 2 Score: 68.1662 bits (165), Expect = 6.937e-11 Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 0 Query: 482 AFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMR 543 A G+ +IA +K + V EDWK++AMVLDR FL+IFT + G++ IIL+AP+LYD R Sbjct: 432 AIDGINYIADQTRKEEESTRVKEDWKYVAMVLDRPFLWIFTLAVVVGSAGIILQAPTLYDER 493
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. SwissProt
Match: gi|113050|sp|P23414.1|ACH1_SCHGR (RecName: Full=Acetylcholine receptor subunit alpha-L1; Flags: Precursor) HSP 1 Score: 415.616 bits (1067), Expect = 1.193e-138 Identity = 207/362 (57.18%), Postives = 258/362 (71.27%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQ 334 LYDDLL+NYNRLIRPV NNT+ + +W D+K +W P +YGGV LYVPS+HIWLPDIVL+NNADG+Y VT MTKA L +TG+++W PPAI+KSSC+I+V +FPFD+QTC MKFGSWTYD Q+DLKH++Q N VK+GIDL E+Y SVEWDIL VPA R+E+YY ++ DI F +TLRRKTLFYT NLI+PCVGIS+L+VLVFYLP+DSGEK+ LCISILLS T+FFLL++EIIP TSLA+PLLGKYLLFTM+LV LS+ +T+ VLN+H+R PSTH+M+PW+RKVFI+ +PK+LLM P+ Sbjct: 30 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFRWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYVVTTMTKAVLHHTGKVVWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGDQIDLKHINQKYDDNKVKVGIDLREYYPSVEWDILGVPAERHEKYY------------------------------PCCAEPYPDIFFNITLRRKTLFYTVNLIVPCVGISYLSVLVFYLPADSGEKIALCISILLSQTMFFLLISEIIPSTSLALPLLGKYLLFTMVLVGLSVVITIMVLNVHYRKPSTHKMAPWVRKVFIRRLPKLLLMRVPE 361 HSP 2 Score: 59.3066 bits (142), Expect = 4.179e-8 Identity = 28/64 (43.75%), Postives = 40/64 (62.50%), Query Frame = 0 Query: 478 QVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYD 541 ++ A V FI H+++ D +DW F+AMVLDR+FL+IFT + GT I+ AP+LYD Sbjct: 471 ELEKAIHNVLFIQNHMQRQDEFDAEDQDWGFVAMVLDRLFLWIFTIASIVGTFAILCEAPALYD 534
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. SwissProt
Match: gi|254763435|sp|P32297.4|ACHA3_HUMAN (RecName: Full=Neuronal acetylcholine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 363.229 bits (931), Expect = 5.725e-119 Identity = 211/563 (37.48%), Postives = 301/563 (53.46%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTE-----------KLTK-----------------WFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLSQVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILR 535 L++ L +YN +IRPV N ++ +L K W DYKLKW P DYGG + + VP+Q IW PDIVL+NNA G ++V TKA LKYTGE+ W PPAI+KSSCKI+V +FPFD Q C MKFGSW+YD ++DL L GS++ +L +++ S EW I+ P +++ Y ++ DIT+ + +RR LFYT NLIIPC+ ISFLTVLVFYLPSD GEKVTLCIS+LLSLTVF L++ E IP TSL +PL+G+YLLFTMI VTLSI +TV VLN+H+R+P+TH M W++ VF+ ++P+++ M RP + +P P+ + L +C SR +D + + HH S++S + S S D VLS+ + S ++ A + V++IA+++K + +E+ +DWK++AMV+DRIFL++FT +C+ GT+ + L+ Sbjct: 38 LFERLFEDYNEIIRPVANVSDPVIIHFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL----VLIGSSM-----NLKDYWESGEWAIIKAPGYKHDIKYN------------------------------CCEEIYPDITYSLYIRRLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPTTHTMPSWVKTVFLNLLPRVMFMTRPTSNEGNAQKPR---------------------PLYGAELSNL--NCFSRAESKGCKEGYPCQDGMCG---------------------------YCHHRRIKISNFSANLTRSSSSESVDAVLSLSALS--------------PEIKEAIQSVKYIAENMKAQNEAKEIQDDWKYVAMVIDRIFLWVFTLVCILGTAGLFLQ 497
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. SwissProt
Match: gi|113061|sp|P04757.1|ACHA3_RAT (RecName: Full=Neuronal acetylcholine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 359.762 bits (922), Expect = 1.087e-117 Identity = 213/563 (37.83%), Postives = 299/563 (53.11%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPN-----------NTEKLTK-----------------WFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLSQVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILR 535 L+ L +YN +IRPV N + +L K W DYKLKWKP DY GV+ + VP++ IW PDIVL+NNADG ++V TKA LKYTGE+ W PPAI+KSSCKI+V +FPFD Q C MKFGSW+YD ++DL L GS++ +L +++ S EW I+ P ++E Y ++ DIT+ + +RR LFYT NLIIPC+ ISFLTVLVFYLPSD GEKVTLCIS+LLSLTVF L++ E IP TSL +PL+G+YLLFTMI VTLSI +TV VLN+H+R+P+TH M W++ VF+ ++P+++ M RP S E G T F + +C SR + +D + HH S++S + S S + VLS+ + S ++ A + V++IA+++K + +E+ +DWK++AMV+DRIFL++F +C+ GT+ + L+ Sbjct: 32 LFQYLFEDYNEIIRPVANVSHPVIIQFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWKPSDYQGVEFMRVPAEKIWKPDIVLYNNADGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL----VLIGSSM-----NLKDYWESGEWAIIKAPGYKHEIKY------------------------------NCCEEIYQDITYSLYIRRLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPTTHTMPTWVKAVFLNLLPRVMFMTRPT-----SGE---------GDTPKTRTFYGAELSNL---------NCFSRADSKSCKEGYPCQDGTCG---------------------------YCHHRRVKISNFSANLTRSSSSESVNAVLSLSALS--------------PEIKEAIQSVKYIAENMKAQNVAKEIQDDWKYVAMVIDRIFLWVFILVCILGTAGLFLQ 491
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. SwissProt
Match: gi|584718|sp|Q07263.1|ACHA3_BOVIN (RecName: Full=Neuronal acetylcholine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 356.681 bits (914), Expect = 1.825e-116 Identity = 207/563 (36.77%), Postives = 298/563 (52.93%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTE-----------KLTK-----------------WFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLSQVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILR 535 L++ L +YN +IRPV N ++ +L K W DYKLKW P DY G + + VP++ IW PDIVL+NNA G ++V TKA LKYTGE+ W PPAI+KSSCKI+V +FPFD Q C MKFGSW+YD ++DL L GS++ +L +++ S EW I+ P +++ Y ++ DIT+ + +RR LFYT NLIIPC+ ISFLTVLVFYLPSD GEKVTLCIS+LLSLTVF L++ E IP TSL +PL+G+YLLFTMI VTLSI +TV VLN+H+R+P+TH M W++ +F+ ++P+++ M RP + P P + + L +C SR +D + + HH S++S + S S D VLS+ + S ++ A + V++IA+++K + +E+ +DWK++AMV+DRIFL++F +C+ GT+ + L+ Sbjct: 28 LFERLFEDYNEIIRPVANVSDPVIIQFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWNPSDYDGAEFMRVPAEKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL----VLIGSSM-----NLKDYWESGEWAIIKAPGYKHDIKYN------------------------------CCEEIYPDITYSLYIRRLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPTTHTMPAWVKTIFLNLLPRVMFMTRPASNEGNTQRPR---------------------PFYSAELSNL--NCFSRIESKVCKEGYPCQDGLCG---------------------------YCHHRRAKISNFSANLTRSSSSESVDAVLSLSALS--------------PEIKEAIQSVKYIAENMKAQNEAKEIQDDWKYVAMVIDRIFLWVFILVCILGTAGLFLQ 487
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. SwissProt
Match: gi|62901487|sp|Q8R4G9.1|ACHA3_MOUSE (RecName: Full=Neuronal acetylcholine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 356.295 bits (913), Expect = 2.399e-116 Identity = 214/563 (38.01%), Postives = 301/563 (53.46%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPN-----------NTEKLTK-----------------WFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLSQVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILR 535 L+ L +YN +IRPV N + +L K W DYKLKWKP DY GV+ + VP++ IW PDIVL+NNADG ++V TKA LKYTGE+ W PPAI+KSSCKI+V +FPFD Q C MKFGSW+YD ++DL L GS++ +L +++ S EW I+ P ++E Y ++ DIT+ + +RR LFYT NLIIPC+ ISFLTVLVFYLPSD GEKVTLCIS+LLSLTVF L++ E IP TSL +PL+G+YLLFTMI VTLSI +TV VLN+H+R+P+TH M W++ VF+ ++P+++ M RP ++ ED T F + +C SR + +D T + HH S++S + S S D VLS+ + S ++ A + V++IA+++K + +E+ +DWK++AMV+DRIFL++F +C+ GT+ + L+ Sbjct: 32 LFQYLFEDYNEIIRPVANVSHPVIIQFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWKPSDYQGVEFMRVPAEKIWKPDIVLYNNADGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL----VLIGSSM-----NLKDYWESGEWAIIKAPGYKHEIKY------------------------------NCCEEIYQDITYSLYIRRLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPTTHTMPTWVKAVFLNLLPRVMFMTRP------TSTEEDA--------PKTRNFYGAELSNL---------NCFSRADSKSCKEGYPCQDG----------------------TCGYCHH-----RRVKISNFSANLTRSSSSESVDAVLSLSALS--------------PEIKEAIQSVKYIAENMKAQNVAKEIQDDWKYVAMVIDRIFLWVFILVCILGTAGLFLQ 491
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. SwissProt
Match: gi|75023400|sp|Q9N587.2|ACH6_CAEEL (RecName: Full=Acetylcholine receptor subunit alpha-type unc-63; AltName: Full=Levamisole-resistant protein 7; AltName: Full=Uncoordinated protein 63; Flags: Precursor) HSP 1 Score: 352.829 bits (904), Expect = 6.319e-115 Identity = 195/392 (49.74%), Postives = 247/392 (63.01%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQ---------LRGSN--------IVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKL 347 L++DL+A+YN+L+RPV N E L W DYKL+W P +YGGV+ LYVPS IWLPD+VL+NNADG Y+VT+MTKA+L Y G + W PPAIYKS C+I+VE+FPFD Q C+MKFGSWTY ++DL+H D+ + G + +V GIDL+++Y SVEWDIL VP R+ + Y DIT+ + LRRKTLFYT NLI P VGISFLT LVFYLPSD GEK++LCISIL+SLTVFFLLL EIIP TSL +PL+GKYLLFTM+LVTLS+ VTV LN+H+RSP+TH M W++++F+ +PK LLM RPQ P + ++P K Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLRWDPVEYGGVEVLYVPSDTIWLPDVVLYNNADGNYQVTIMTKAKLTYNGTVEWAPPAIYKSMCQIDVEFFPFDRQQCEMKFGSWTYGGLEVDLQHRDKHLEKEIEEDVEGVDGPTKEIVWVVDRGIDLSDYYPSVEWDILNVPGKRHSKRY------------------------------PCCESPFIDITYEIHLRRKTLFYTVNLIFPSVGISFLTALVFYLPSDGGEKISLCISILISLTVFFLLLVEIIPSTSLVIPLIGKYLLFTMVLVTLSVVVTVVTLNVHYRSPTTHTMPKWMKRLFVDFLPKYLLMTRPQ-PPGHHSKPNRKF 390 HSP 2 Score: 88.5817 bits (218), Expect = 2.109e-17 Identity = 47/121 (38.84%), Postives = 67/121 (55.37%), Query Frame = 0 Query: 427 HHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLSQVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMRPSLG 547 HH + S S L + L +S ++++ PR S V +A + V +IA H+K + D++VIEDWK+I++V+DRIFL FTF C GT II RAPS+YD P+L Sbjct: 382 HHSKPNRKFDSRASTFSIGVNHVLGQNSELLSPGLNSNREESSFTLPRDNSPVRSAVESVAYIADHLKNEEDDKQVIEDWKYISVVMDRIFLITFTFACAFGTVVIIARAPSIYDNTPALA 502
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. nr
Match: gi|584600390|gb|AHJ11221.1| (nicotinic acetylcholine receptor alpha8 variant D [Locusta migratoria]) HSP 1 Score: 581.252 bits (1497), Expect = 0.000e+0 Identity = 317/580 (54.66%), Postives = 373/580 (64.31%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPA-----SQSPLKHDDVLS--IQSKSSQK-DDTETDGPRPLS-QVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMR 543 LYDDLL+NYNRLIRPV NN+E LT KW DYKL+W PE+YGGV+ LYVPS+HIWLPDIVL+NNADG YEVTLMTKA LKYTGE+ WKPPAIYKSSC+INVE+FPFDEQ+C MKFGSWTY+ FQ+DLKHMDQ GSN+V +GIDL+EFY+SVEWDILAVPATRNEEYY + +DITF +T+RRKTLFYT NLIIPCVGI+FLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSI+VTV VLN+HFRSPSTHRMSPW+++VF+ MP++L+M RP Y R C T F G +D + ++ RD ++ + SP +S + +H + HS S A S + D S QS S+ D++ PR LS + +A +GV FIAQHIK AD+D EVIEDWK+++MVLDR FL+IFT C+ GT II +APSLYD R Sbjct: 32 LYDDLLSNYNRLIRPVTNNSETLTVHLGLKLSQLIEVNLKNQVMTTNVWVEQKWIDYKLRWNPEEYGGVEMLYVPSEHIWLPDIVLYNNADGNYEVTLMTKATLKYTGEVFWKPPAIYKSSCEINVEYFPFDEQSCTMKFGSWTYNGFQVDLKHMDQEAGSNLVSVGIDLSEFYLSVEWDILAVPATRNEEYY------------------------------PCCVEPYSDITFNITMRRKTLFYTVNLIIPCVGITFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSISVTVFVLNVHFRSPSTHRMSPWVKRVFLHFMPRLLMMRRPPYSSR--------------DCIDDTNFLDN----------GYSND-------MDFSECSVCRDSISDPYPPDVKGSPGFESVAAAYKSALNNHEDSCRQNQPHSSECLSSNAVGVATGLSDCQDDGCFSRICQSASAATVTDSDNTLPRNLSPDILSALEGVRFIAQHIKDADKDNEVIEDWKYVSMVLDRFFLWIFTLACIAGTCGIIFQAPSLYDKR 550
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. nr
Match: gi|584600388|gb|AHJ11220.1| (nicotinic acetylcholine receptor alpha8 variant C [Locusta migratoria]) HSP 1 Score: 578.556 bits (1490), Expect = 0.000e+0 Identity = 316/580 (54.48%), Postives = 370/580 (63.79%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPA-----SQSPLKHDDVLS--IQSKSSQK-DDTETDGPRPLS-QVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMR 543 LYDDLL+NYNRLIRPV NN+E LT KW DYKL+W PE+YGGV+ LYVPS+HIWLPDIVL+NNADG YEVTLMTKA LKYTGE+ WKPPAIYKSSC+INVE+FPFDEQ+C MKFGSWTY+ FQ+DLKHMDQ GSN+V +GIDL+EFY+SVEWDILAVPATRNEEYY + +DITF +T+RRKTLFYT NLIIPCVGI+FLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSI+VTV VLN+HFRSPSTHRMSPW+++VF+ MP++L+M RP Y R + D + +D + F PD +G SP +S + +H + HS S A S + D S QS S+ D++ PR LS + +A +GV FIAQHIK AD+D EVIEDWK+++MVLDR FL+IFT C+ GT II +APSLYD R Sbjct: 32 LYDDLLSNYNRLIRPVTNNSETLTVHLGLKLSQLIEVNLKNQVMTTNVWVEQKWIDYKLRWNPEEYGGVEMLYVPSEHIWLPDIVLYNNADGNYEVTLMTKATLKYTGEVFWKPPAIYKSSCEINVEYFPFDEQSCTMKFGSWTYNGFQVDLKHMDQEAGSNLVSVGIDLSEFYLSVEWDILAVPATRNEEYY------------------------------PCCVEPYSDITFNITMRRKTLFYTVNLIIPCVGITFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSISVTVFVLNVHFRSPSTHRMSPWVKRVFLHFMPRLLMMRRPPYSSR---DCIDDTNFLDNGYSNDMDFRDSISDPYPPDVKG----------------------------------SPGFESVAAAYKSALNNHEDSCRQNQPHSSECLSSNAVGVATGLSDCQDDGCFSRICQSASAATVTDSDNTLPRNLSPDILSALEGVRFIAQHIKDADKDNEVIEDWKYVSMVLDRFFLWIFTLACIAGTCGIIFQAPSLYDKR 544
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. nr
Match: gi|584600386|gb|AHJ11219.1| (nicotinic acetylcholine receptor alpha8 variant B [Locusta migratoria]) HSP 1 Score: 573.548 bits (1477), Expect = 0.000e+0 Identity = 309/572 (54.02%), Postives = 364/572 (63.64%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLS-QVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMR 543 LYDDLL+NYNRLIRPV NN+E LT KW DYKL+W PE+YGGV+ LYVPS+HIWLPDIVL+NNADG YEVTLMTKA LKYTGE+ WKPPAIYKSSC+INVE+FPFDEQ+C MKFGSWTY+ FQ+DLKHMDQ GSN+V +GIDL+EFY+SVEWDILAVPATRNEEYY + +DITF +T+RRKTLFYT NLIIPCVGI+FLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSI+VTV VLN+HFRSPSTHRMSPW+++VF+ MP++L+M RP Y R C T F G +D + ++ RD ++ + SP +S + +H + HS + D++ PR LS + +A +GV FIAQHIK AD+D EVIEDWK+++MVLDR FL+IFT C+ GT II +APSLYD R Sbjct: 32 LYDDLLSNYNRLIRPVTNNSETLTVHLGLKLSQLIEVNLKNQVMTTNVWVEQKWIDYKLRWNPEEYGGVEMLYVPSEHIWLPDIVLYNNADGNYEVTLMTKATLKYTGEVFWKPPAIYKSSCEINVEYFPFDEQSCTMKFGSWTYNGFQVDLKHMDQEAGSNLVSVGIDLSEFYLSVEWDILAVPATRNEEYY------------------------------PCCVEPYSDITFNITMRRKTLFYTVNLIIPCVGITFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSISVTVFVLNVHFRSPSTHRMSPWVKRVFLHFMPRLLMMRRPPYSSR--------------DCIDDTNFLDN----------GYSND-------MDFSECSVCRDSISDPYPPDVKGSPGFESVAAAYKSALNNHEDSCRQNQPHSSVT--------------------------DSDNTLPRNLSPDILSALEGVRFIAQHIKDADKDNEVIEDWKYVSMVLDRFFLWIFTLACIAGTCGIIFQAPSLYDKR 516
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. nr
Match: gi|584600384|gb|AHJ11218.1| (nicotinic acetylcholine receptor alpha8 variant A [Locusta migratoria]) HSP 1 Score: 571.622 bits (1472), Expect = 0.000e+0 Identity = 308/572 (53.85%), Postives = 361/572 (63.11%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLS-QVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMR 543 LYDDLL+NYNRLIRPV NN+E LT KW DYKL+W PE+YGGV+ LYVPS+HIWLPDIVL+NNADG YEVTLMTKA LKYTGE+ WKPPAIYKSSC+INVE+FPFDEQ+C MKFGSWTY+ FQ+DLKHMDQ GSN+V +GIDL+EFY+SVEWDILAVPATRNEEYY + +DITF +T+RRKTLFYT NLIIPCVGI+FLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSI+VTV VLN+HFRSPSTHRMSPW+++VF+ MP++L+M RP Y R + D + +D + F PD +G SP +S + +H + HS + D++ PR LS + +A +GV FIAQHIK AD+D EVIEDWK+++MVLDR FL+IFT C+ GT II +APSLYD R Sbjct: 32 LYDDLLSNYNRLIRPVTNNSETLTVHLGLKLSQLIEVNLKNQVMTTNVWVEQKWIDYKLRWNPEEYGGVEMLYVPSEHIWLPDIVLYNNADGNYEVTLMTKATLKYTGEVFWKPPAIYKSSCEINVEYFPFDEQSCTMKFGSWTYNGFQVDLKHMDQEAGSNLVSVGIDLSEFYLSVEWDILAVPATRNEEYY------------------------------PCCVEPYSDITFNITMRRKTLFYTVNLIIPCVGITFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSISVTVFVLNVHFRSPSTHRMSPWVKRVFLHFMPRLLMMRRPPYSSR---DCIDDTNFLDNGYSNDMDFRDSISDPYPPDVKG----------------------------------SPGFESVAAAYKSALNNHEDSCRQNQPHSSVT--------------------------DSDNTLPRNLSPDILSALEGVRFIAQHIKDADKDNEVIEDWKYVSMVLDRFFLWIFTLACIAGTCGIIFQAPSLYDKR 510
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. nr
Match: gi|2764509|emb|CAA04053.1| (nicotinic acetylcholine receptor, alpha2 subunit, partial [Locusta migratoria]) HSP 1 Score: 570.466 bits (1469), Expect = 0.000e+0 Identity = 308/572 (53.85%), Postives = 361/572 (63.11%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLS-QVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMR 543 LYDDLL+NYNRLIRPV NN+E LT KW DYKL+W PE+YGGV+ LYVPS+HIWLPDIVL+NNADG YEVTLMTKA LKYTGE+ WKPPAIYKSSC+INVE+FPFDEQ+C MKFGSWTY+ FQ+DLKHMDQ GSN+V +GIDL+EFY+SVEWDILAVPATRNEEYY + +DITF +T+RRKTLFYT NLIIPCVGI+FLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSI+VTV VLN+HFRSPSTHRMSPW+++VF+ MP++L+M RP Y R + D + +D + F PD +G SP +S + +H + HS + D++ PR LS + +A +GV FIAQHIK AD+D EVIEDWK+++MVLDR FL+IFT C+ GT II +APSLYD R Sbjct: 7 LYDDLLSNYNRLIRPVTNNSETLTVHLGLKLSQLIEVNLKNQVMTTNVWVEQKWIDYKLRWNPEEYGGVEMLYVPSEHIWLPDIVLYNNADGNYEVTLMTKATLKYTGEVFWKPPAIYKSSCEINVEYFPFDEQSCTMKFGSWTYNGFQVDLKHMDQEAGSNLVSVGIDLSEFYLSVEWDILAVPATRNEEYY------------------------------PCCVEPYSDITFNITMRRKTLFYTVNLIIPCVGITFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSISVTVFVLNVHFRSPSTHRMSPWVKRVFLHFMPRLLMMRRPPYSSR---DCIDDTNFLDNGYSNDMDFRDSISDPYPPDVKG----------------------------------SPGFESVAAAYKSALNNHEDSCRQNQPHSSVT--------------------------DSDNTLPRNLSPDILSALEGVRFIAQHIKDADKDNEVIEDWKYVSMVLDRFFLWIFTLACIAGTCGIIFQAPSLYDKR 485
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. nr
Match: gi|1339068787|ref|XP_023721509.1| (acetylcholine receptor subunit beta-like 2 [Cryptotermes secundus]) HSP 1 Score: 569.696 bits (1467), Expect = 0.000e+0 Identity = 303/572 (52.97%), Postives = 364/572 (63.64%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLS-QVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMR 543 LYDDLL+NYNRLIRPV NNT+ LT KW DYKL+W PE+YGGV+ LYVPS+HIWLPDIVL+NNADG YEVTLMTKA LK+TGE+ WKPPAIYKSSC+INVE+FPFDEQ+C MKFGSWTY+ FQ+DLKHMDQ++GSN+V +GIDL+EFY+SVEWDIL VPA RNEEYY + + +DITF +T+RRKTLFYT NLIIPCVGI+FLTVLVFYLPSDSGEKV+LC+SILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSI++TV VLN+HFRSPSTH+MSPW+++VF+ +MP++L+M RP Y R + FE HFP + T RD ++ + SP +S T T + H S D++ PR LS V +A +GV FIAQHIK AD+D E++EDWK+++MVLDR FL++FT C+GGT II +APSLYD R Sbjct: 31 LYDDLLSNYNRLIRPVSNNTDTLTVWLGLKLSQLIEVNLKSQVMTTNLWVQQKWIDYKLRWDPEEYGGVEMLYVPSEHIWLPDIVLYNNADGNYEVTLMTKATLKFTGEVFWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGFQVDLKHMDQVQGSNLVSVGIDLSEFYLSVEWDILEVPARRNEEYYPCCK------------------------------EPYSDITFNLTMRRKTLFYTVNLIIPCVGITFLTVLVFYLPSDSGEKVSLCVSILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSISITVFVLNVHFRSPSTHKMSPWVKRVFLHLMPRLLMMRRPPYSSRDN-------------------FEDAHFP------------------DNGYTNELEFRDSISDPYPPEPKGSPGFESVSTAYKTALSQDEEARQNQPH---------------------------SSVTDSDNTLPRQLSPDVLSALQGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLWVFTLACIGGTCGIIFQAPSLYDKR 508
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. nr
Match: gi|1233189400|ref|XP_022195805.1| (acetylcholine receptor subunit beta-like 2 [Nilaparvata lugens]) HSP 1 Score: 568.155 bits (1463), Expect = 0.000e+0 Identity = 310/572 (54.20%), Postives = 362/572 (63.29%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLS-QVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMR 543 LYDDLL+NYNRLIRPV NNTE LT KW DYKL+W PE+YGGV+ LYVPS+HIWLPDIVL+NNADG YEVTLMTKA LKYTGE+ WKPPAIYKSSC+INV +FPFDEQ+C MKFGSWTY+ FQ+DLKHM+Q+ GSN+V +GIDL+EFY+SVEWDIL VPA RNEEYY ++ +DITF +T+RRKTLFYT NLIIPCVGI+FLTVLVFYLPSDSGEKVTLC SIL+SLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSI VTV VLN+HFRSPSTH MSPW++KVF+++MP++L+M RP Y PR ++ G+ G PD D C C+ TL+ + ++ SP +S H H S D E PR +S V AA +GV FIAQHIK AD+D EVIEDWK+I+MVLDR FL++FT C+GGT II +APSLYD R Sbjct: 38 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEMNLKNQVMTTNVWVEQKWVDYKLRWDPEEYGGVEMLYVPSEHIWLPDIVLYNNADGNYEVTLMTKATLKYTGEVYWKPPAIYKSSCEINVLYFPFDEQSCLMKFGSWTYNGFQVDLKHMEQVSGSNLVSIGIDLSEFYLSVEWDILDVPARRNEEYY------------------------------PCCTEPYSDITFNLTMRRKTLFYTVNLIIPCVGITFLTVLVFYLPSDSGEKVTLCSSILVSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSICVTVCVLNVHFRSPSTHNMSPWVKKVFLRLMPRLLMMRRPPYSPR-------EIYAASGASGGG-----------DPD-----DLC---CQSDTLSDAPYD----PQGHLKATSASPSFESVAAAYNRHQAH-------------------------------------SSMVDPENTLPRQMSPDVLAALQGVRFIAQHIKDADKDNEVIEDWKYISMVLDRFFLWVFTIACIGGTCGIIFQAPSLYDQR 512
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. nr
Match: gi|218175578|gb|ACK75719.1| (nicotinic acetylcholine receptor alpha 8 subunit [Nilaparvata lugens]) HSP 1 Score: 566.229 bits (1458), Expect = 0.000e+0 Identity = 309/572 (54.02%), Postives = 361/572 (63.11%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLS-QVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMR 543 LYDDLL+NYNRLIRPV NNTE LT KW DYKL+W PE+YGGV+ LYVPS+HIWLPDIVL+NNADG YEVTLMTKA LKYTGE+ WKPPAIYKSSC+INV +FPFDEQ+C MKFGSWTY+ FQ+DLKHM+Q+ GSN+V +GIDL+EFY+S EWDIL VPA RNEEYY ++ +DITF +T+RRKTLFYT NLIIPCVGI+FLTVLVFYLPSDSGEKVTLC SIL+SLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSI VTV VLN+HFRSPSTH MSPW++KVF+++MP++L+M RP Y PR ++ G+ G PD D C C+ TL+ + ++ SP +S H H S D E PR +S V AA +GV FIAQHIK AD+D EVIEDWK+I+MVLDR FL++FT C+GGT II +APSLYD R Sbjct: 36 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEMNLKNQVMTTNVWVEQKWVDYKLRWDPEEYGGVEMLYVPSEHIWLPDIVLYNNADGNYEVTLMTKATLKYTGEVYWKPPAIYKSSCEINVLYFPFDEQSCLMKFGSWTYNGFQVDLKHMEQVSGSNLVSIGIDLSEFYLSAEWDILDVPARRNEEYY------------------------------PCCTEPYSDITFNLTMRRKTLFYTVNLIIPCVGITFLTVLVFYLPSDSGEKVTLCSSILVSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSICVTVCVLNVHFRSPSTHNMSPWVKKVFLRLMPRLLMMRRPPYSPR-------EIYAASGASGGG-----------DPD-----DLC---CQSDTLSDAPYD----PQGHLKATSASPSFESVAAAYNRHQAH-------------------------------------SSMVDPENTLPRQMSPDVLAALQGVRFIAQHIKDADKDNEVIEDWKYISMVLDRFFLWVFTIACIGGTCGIIFQAPSLYDQR 510
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. nr
Match: gi|375004967|gb|AFA28130.1| (nicotinic acetylcholine receptor alpha8 subunit [Periplaneta americana]) HSP 1 Score: 560.451 bits (1443), Expect = 0.000e+0 Identity = 303/572 (52.97%), Postives = 363/572 (63.46%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRPLS-QVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMR 543 LYDDLL+NYNRLIRPV NNTE LT KW DYKL+W PE+YGGV+ LYVPS+HIWLPDIVL+NNADG YEVTLMTKA LK+TGE+ WKPPAIYKSSC+INVE+ PFDEQ+C MKFGSWTY+ FQ+DLKHMDQ+ GSN+V +GIDL+EFY+SVEWDIL VPA RNEEYY ++ +DITF +T+RRKTLFYT NLIIPCVGI+FLTVLVFYLPSDSGEKV+LC+SILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSI++TV VLN+HFRSPSTH+MSPW+++VF+ MP++L+M RP Y R + D + D + F P+ +G P T ++ LS+DE A H HS + D++ PR LS V +A +GV FIAQHIK AD+D E++EDWK+++MVLDR FL++FT C+GGT II +APSLYD R Sbjct: 33 LYDDLLSNYNRLIRPVINNTETLTVWLGLKLSQLIEVNLKNQVMTTNLWVQQKWIDYKLRWDPEEYGGVEMLYVPSEHIWLPDIVLYNNADGNYEVTLMTKATLKHTGEVFWKPPAIYKSSCEINVEYSPFDEQSCIMKFGSWTYNGFQVDLKHMDQVPGSNLVNVGIDLSEFYLSVEWDILEVPARRNEEYY------------------------------PCCAEPYSDITFNLTMRRKTLFYTVNLIIPCVGITFLTVLVFYLPSDSGEKVSLCVSILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSISITVFVLNVHFRSPSTHKMSPWVKRVFLHFMPRLLMMRRPPYSSR---DNFDDTNFQDNGYTNEMDFRDSISDPYPPELKG----SPGFESVSTAYKTALSQDEEA-------------------------------RQHQPHSSVT--------------------------DSDNTLPRQLSPDVLSALQGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLWVFTLACIGGTCGIIFQAPSLYDKR 510
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. nr
Match: gi|914748526|gb|AKV94623.1| (nicotinic acetylcholine receptor alpha8 variant A [Periplaneta americana]) HSP 1 Score: 559.296 bits (1440), Expect = 0.000e+0 Identity = 304/572 (53.15%), Postives = 364/572 (63.64%), Query Frame = 0 Query: 1 LYDDLLANYNRLIRPVPNNTEKLT----------------------------KWFDYKLKWKPEDYGGVDTLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGELIWKPPAIYKSSCKINVEWFPFDEQTCDMKFGSWTYDAFQLDLKHMDQLRGSNIVKMGIDLTEFYVSVEWDILAVPATRNEEYYTPQRYQEELSLDGEAELATELDQGVDDDDDESKSKLLTDITFYMTLRRKTLFYTTNLIIPCVGISFLTVLVFYLPSDSGEKVTLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSITVTVGVLNIHFRSPSTHRMSPWLRKVFIQIMPKILLMERPQYIPRYSAEPEDKLSVIDGSCGSTTLFESQHFPMVTPDCEGLKDDCPSRCRHHTLTRSTLSRDEVASNGVQFQQQSPFHQSNVTTLTTHHVHHHHHHHHHHHHSHYSPSPPASQSPLKHDDVLSIQSKSSQKDDTETDGPRP-LSQVAAAFKGVEFIAQHIKKADRDREVIEDWKFIAMVLDRIFLFIFTFLCLGGTSWIILRAPSLYDMR 543 LYDDLL+NYNRLIRPV NNTE LT KW DYKL+W PE+YGGV+ LYVPS+HIWLPDIVL+NNADG YEVTLMTKA LK+TGE+ WKPPAIYKSSC+INVE+FPFDEQ+C MKFGSWTY+ FQ+DLKHMDQ+ GSN+V +GIDL+EFY+SVEWDIL VPA RNEEYY AE +++ ITF +T+RRKTLFYT NLIIPCVGI+FLTVLVFYLPSDSGEKV+LC+SILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSI++TV VLN+HFRSPSTH+MSPW+++VF+ MP++L+M RP Y R + D + D + F P+ +G P T ++ LS+DE A H HS + D++ PR L V +A +GV FIAQHIK AD+D E++EDWK+++MVLDR FL++FT C+GGT II +APSLYD R Sbjct: 35 LYDDLLSNYNRLIRPVINNTETLTVWLGLKLSQLIEVNLKNQVMTTNLWVQQKWIDYKLRWDPEEYGGVEMLYVPSEHIWLPDIVLYNNADGNYEVTLMTKATLKHTGEVFWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGFQVDLKHMDQVPGSNLVNVGIDLSEFYLSVEWDILEVPARRNEEYYP-----------CCAEPYSDI-----------------TITFNLTMRRKTLFYTVNLIIPCVGITFLTVLVFYLPSDSGEKVSLCVSILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSISITVFVLNVHFRSPSTHKMSPWVKRVFLHFMPRLLMMRRPPYSSR---DNFDDTNFQDNGYTNEMDFRDSISDPYPPELKG----SPGFESVSTAYKTALSQDEEA-------------------------------RQHQPHSSVT--------------------------DSDNTLPRQLLPDVLSALQGVRFIAQHIKDADKDNEIVEDWKYVSMVLDRFFLWVFTLACIGGTCGIIFQAPSLYDKR 514 The following BLAST results are available for this feature:
BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 20
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BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of nicotinic acetylcholine receptor alpha8 variant d vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold99_size374999:23338..30515- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold99_size374999-snap-gene-0.24 ID=maker-scaffold99_size374999-snap-gene-0.24|Name=nicotinic acetylcholine receptor alpha8 variant d|organism=Tigriopus kingsejongensis|type=gene|length=7178bp|location=Sequence derived from alignment at scaffold99_size374999:23338..30515- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nicotinic acetylcholine receptor alpha8 variant d' has the following synonyms
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