zinc transporter zip1, maker-scaffold9_size846264-snap-gene-0.10 (gene) Tigriopus kingsejongensis

Overview
Namezinc transporter zip1
Unique Namemaker-scaffold9_size846264-snap-gene-0.10
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of zinc transporter zip1 vs. L. salmonis genes
Match: EMLSAG00000005333 (supercontig:LSalAtl2s:LSalAtl2s286:45599:179721:1 gene:EMLSAG00000005333 transcript:EMLSAT00000005333 description:"maker-LSalAtl2s286-augustus-gene-1.20")

HSP 1 Score: 78.9518 bits (193), Expect = 8.417e-19
Identity = 41/108 (37.96%), Postives = 68/108 (62.96%), Query Frame = 0
Query:    2 HKYVIAFCFGIELMANKTNKKLMIGYFFVFAIFSPLGIGMGI---GINEAQSETPSYAFTSGTLQALSAGTILYVVVFEILQRERQKDVNGLLQLLVLVLGFVAMVLV 106
            HK+VIAF  G++ + +  ++ +++    +F+  SPLGI +GI      +   E+P        L  L+AGT+LYVV FE+L++ER K  NGL+Q+  +++GF+ MVL+
Sbjct:  529 HKFVIAFVIGMQFVVSGLSRIMVVSLICIFSSISPLGIIIGILVTNTGDNNQESPEQTVAITVLNGLAAGTLLYVVFFEVLEKERAKQKNGLIQVGSIMMGFLFMVLI 636          

HSP 2 Score: 51.2174 bits (121), Expect = 4.621e-9
Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 0
Query:   35 SPLGIGMGI---GINEAQSETPSYAFTSGTLQALSAGTILYVVVFEILQRERQKDVNGLLQ 92
            SPLGI +GI     N+ +S   + A T   L  L+AGT+LYVV FE+L++ER K  +GL+Q
Sbjct:  188 SPLGIIIGIFVTNANDQESTEQTVAIT--VLNGLTAGTLLYVVFFEVLEKERAKQKHGLIQ 246          
BLAST of zinc transporter zip1 vs. L. salmonis genes
Match: EMLSAG00000000833 (supercontig:LSalAtl2s:LSalAtl2s113:617429:618130:-1 gene:EMLSAG00000000833 transcript:EMLSAT00000000833 description:"augustus_masked-LSalAtl2s113-processed-gene-6.0")

HSP 1 Score: 67.0106 bits (162), Expect = 4.246e-15
Identity = 37/103 (35.92%), Postives = 58/103 (56.31%), Query Frame = 0
Query:    2 HKYVIAFCFGIELMANKTNKKLMIGYFFVFAIFSPLGIGMGIGINEAQSETPSYAFTSGTLQALSAGTILYVVVFEILQRERQK-DVNGLLQLLVLVLGFVAM 103
            HK +++F FG+ +  +K   +  I Y  +F+I SPLGIG+G G+NE    +P+       L   + GT L++  FEI+  E  K  VN  L+   L++GF+ M
Sbjct:  122 HKLIMSFSFGMNVCQSKIRLRTYIAYIIIFSISSPLGIGIGSGLNELPP-SPTLDLIKVFLTGFTGGTFLFLTFFEIISTEFTKIKVNRALKFFFLIVGFIGM 223          
BLAST of zinc transporter zip1 vs. L. salmonis genes
Match: EMLSAG00000002710 (supercontig:LSalAtl2s:LSalAtl2s1563:26220:27095:-1 gene:EMLSAG00000002710 transcript:EMLSAT00000002710 description:"augustus_masked-LSalAtl2s1563-processed-gene-0.1")

HSP 1 Score: 58.151 bits (139), Expect = 1.115e-11
Identity = 36/109 (33.03%), Postives = 60/109 (55.05%), Query Frame = 0
Query:    2 HKYVIAFCFGIELMANKTNKKLMIGYFFVFAIFSPLGIGMGIGINEAQSETPSYAFTSGTLQALSAGTILYVVVFEILQRERQKDV----NGLLQLLVLVLGFVAMVLV 106
            HK ++AF  GI L   K   K+ +G   +F+I SP+GI +GIG+        S    +  LQA++ GT LY+   E+L  E   ++    + +L++L ++LGF  + +V
Sbjct:  178 HKGIMAFSLGINLTRAKVVLKVFMGCILIFSIASPIGIAIGIGLMNLPPSL-SRDIVALILQAIAGGTFLYITFIEVLFHELNYNMHEGPDRMLRILCIILGFATIAIV 285          
BLAST of zinc transporter zip1 vs. SwissProt
Match: gi|296452889|sp|Q9NP94.2|S39A2_HUMAN (RecName: Full=Zinc transporter ZIP2; AltName: Full=6A1; AltName: Full=Eti-1; AltName: Full=Solute carrier family 39 member 2; AltName: Full=Zrt- and Irt-like protein 2; Short=ZIP-2; Short=hZIP2)

HSP 1 Score: 51.6026 bits (122), Expect = 9.932e-8
Identity = 30/108 (27.78%), Postives = 51/108 (47.22%), Query Frame = 0
Query:    2 HKYVIAFCFGIELMANKTNKKLMIGYFFVFAIFSPLGIGMGIGINEAQSETPSYAFTSGTLQALSAGTILYVVVFEILQRERQKDVNGLLQLLVLVLGFVAMVLVEVF 109
            HK ++ F  G+ L+   T+ +  +    + A+ SPLG+ +G+ +    SE          L+ ++AGT LYV   EIL RE       L +   +  GF  M  + ++
Sbjct:  202 HKGLVVFGVGMRLVHLGTSSRWAVFSILLLALMSPLGLAVGLAVTGGDSEG-GRGLAQAVLEGVAAGTFLYVTFLEILPRELASPEAPLAKWSCVAAGFAFMAFIALW 308          
BLAST of zinc transporter zip1 vs. SwissProt
Match: gi|82202851|sp|Q6QQT1.1|S39A1_TAKRU (RecName: Full=Zinc transporter ZIP1; AltName: Full=Solute carrier family 39 member 1; AltName: Full=Zrt- and Irt-like protein 1; Short=ZIP-1)

HSP 1 Score: 48.9062 bits (115), Expect = 8.136e-7
Identity = 35/103 (33.98%), Postives = 54/103 (52.43%), Query Frame = 0
Query:    1 MHKYVIAFCFGIELMANKTNKKLMIGYFFVFAIFSPLGIGMGIGINEAQSETPSYAFTSGTLQALSAGTILYVVVFEILQRERQKDVNGLLQLLVLVLGFVAM 103
            +HK +I F   ++L+ +      +  Y  VFA+ SP+GI +GI + EAQ    +       L+  +AGT +Y+   EIL  E       LL++L L+LGF  M
Sbjct:  195 VHKSIIVFSLAVKLVQSAIPPLWVAAYIGVFALMSPVGIAIGISVMEAQ--LAAGPLIQAILEGFAAGTFVYITFLEILPHELNSPGKQLLKVLFLLLGFSIM 295          
BLAST of zinc transporter zip1 vs. nr
Match: gi|939673537|ref|XP_014283084.1| (PREDICTED: zinc transporter ZIP1-like [Halyomorpha halys] >gi|939687716|ref|XP_014287801.1| PREDICTED: zinc transporter ZIP1-like [Halyomorpha halys])

HSP 1 Score: 103.219 bits (256), Expect = 7.524e-24
Identity = 52/109 (47.71%), Postives = 75/109 (68.81%), Query Frame = 0
Query:    2 HKYVIAFCFGIELMANKTNKKLMIGYFFVFAIFSPLGIGMGIGIN-EAQSETPSYAFTSGTLQALSAGTILYVVVFEILQRERQKDVNGLLQLLVLVLGFVAMVLVEVF 109
            HK VIAFC GIEL++++T   L++ Y   FA+ SPLGIG+G+ I+ E   ++P  A  S  LQ ++AGT+LYVV FE+LQRE+     GL QLL ++ GF+ M+ + +F
Sbjct:  259 HKLVIAFCIGIELVSSRTKPTLILVYIATFALVSPLGIGLGLIISTEGALDSPPLALASVILQGMAAGTLLYVVFFEVLQREKSHSRYGLAQLLAIMAGFIVMIALGIF 367          
BLAST of zinc transporter zip1 vs. nr
Match: gi|1101350504|ref|XP_018901201.1| (PREDICTED: zinc transporter ZIP3-like [Bemisia tabaci])

HSP 1 Score: 102.834 bits (255), Expect = 2.459e-23
Identity = 49/102 (48.04%), Postives = 69/102 (67.65%), Query Frame = 0
Query:    2 HKYVIAFCFGIELMANKTNKKLMIGYFFVFAIFSPLGIGMGIGINEAQSETPSYAFTSGTLQALSAGTILYVVVFEILQRERQKDVNGLLQLLVLVLGFVAM 103
            HK+VIAFC G+EL+++KT   L++ Y   FA+ +P+GIG GI ++    E      T+  LQ ++AGT+LYVV FE+LQRER    +GLLQLL ++ GF  M
Sbjct:  326 HKFVIAFCVGVELVSSKTRLSLLVVYVATFAVVTPIGIGAGIALSTYHGEASDGGLTTTLLQGMAAGTLLYVVFFEVLQRERANTQSGLLQLLAIMAGFGTM 427          
BLAST of zinc transporter zip1 vs. nr
Match: gi|1325335283|ref|XP_023349468.1| (protein zntD-like [Eurytemora affinis])

HSP 1 Score: 102.064 bits (253), Expect = 5.214e-23
Identity = 52/108 (48.15%), Postives = 74/108 (68.52%), Query Frame = 0
Query:    2 HKYVIAFCFGIELMANKTNKKLMIGYFFVFAIFSPLGIGMGIGINEAQSETPSYAFTSGTLQALSAGTILYVVVFEILQRERQKDVNGLLQLLVLVLGFVAMVLVEVF 109
            HK+VI FC  +ELM + T       Y   F++ SPLGIG+G+ I+E  S+   +  T   LQ L+ GTI+YVV+FE+LQRE+ K+V+GLLQLL +++GF  M+ +EVF
Sbjct:  302 HKFVITFCVCVELMQSGTKTLFYFLYLTTFSLVSPLGIGIGLLISELGSKDEFHMTTIAVLQGLAGGTIIYVVMFEVLQREKVKEVSGLLQLLCIIIGFSLMLTIEVF 409          
BLAST of zinc transporter zip1 vs. nr
Match: gi|766931338|ref|XP_011497845.1| (PREDICTED: zinc transporter ZIP2-like [Ceratosolen solmsi marchali] >gi|766931340|ref|XP_011497846.1| PREDICTED: zinc transporter ZIP2-like [Ceratosolen solmsi marchali] >gi|766931342|ref|XP_011497847.1| PREDICTED: zinc transporter ZIP2-like [Ceratosolen solmsi marchali])

HSP 1 Score: 99.7525 bits (247), Expect = 2.530e-22
Identity = 45/107 (42.06%), Postives = 76/107 (71.03%), Query Frame = 0
Query:    2 HKYVIAFCFGIELMANKTNKKLMIGYFFVFAIFSPLGIGMGIGINEAQSETPSYAFTSGTLQALSAGTILYVVVFEILQRERQKDVNGLLQLLVLVLGFVAMVLVEV 108
            HK VI+FC G+EL     +K+ ++GY  VF++ +PLGIG+G+ +   ++++ +   T   LQ ++AGT+LYVV FE+L RER  D +GLLQL+ +++GF+ M+ +++
Sbjct:  279 HKLVISFCVGMELYVAGASKRTILGYLSVFSMVTPLGIGVGLALGHLRNDSETLGPTPTILQGMAAGTLLYVVFFEVLARERANDKSGLLQLVAILVGFMLMLGLQI 385          
BLAST of zinc transporter zip1 vs. nr
Match: gi|321450802|gb|EFX62679.1| (hypothetical protein DAPPUDRAFT_67795 [Daphnia pulex])

HSP 1 Score: 91.6633 bits (226), Expect = 2.354e-21
Identity = 48/104 (46.15%), Postives = 68/104 (65.38%), Query Frame = 0
Query:    2 HKYVIAFCFGIELMANKTNKKLMIGYFFVFAIFSPLGIGMGIGINEAQS--ETPSYAFTSGTLQALSAGTILYVVVFEILQRERQKDVNGLLQLLVLVLGFVAM 103
            HK+VI+FC G+EL  +     +   Y  VF++ +PLGIG+GI +  + S  E  + + TS  +Q L+ GTILYV  FEIL+RER K   GL+Q  +LVLGF+A+
Sbjct:   42 HKFVISFCVGLELSTSGVKVLMHTIYILVFSLVTPLGIGIGIIMTSSSSGDENVTVSLTSLIMQGLACGTILYVAFFEILERERSKSTVGLIQWTLLVLGFLAI 145          
BLAST of zinc transporter zip1 vs. nr
Match: gi|939260888|ref|XP_014250323.1| (zinc transporter ZIP3-like [Cimex lectularius])

HSP 1 Score: 96.2857 bits (238), Expect = 3.400e-21
Identity = 50/105 (47.62%), Postives = 74/105 (70.48%), Query Frame = 0
Query:    2 HKYVIAFCFGIELMANKTNKKLMIGYFFVFAIFSPLGIGMGIGI--NEAQSETPSYAFTSGTLQALSAGTILYVVVFEILQRERQKDVNGLLQLLVLVLGFVAMV 104
            HK VIAFC G+EL++  T K L++ Y   FA+ +PLGIG+G+G+  +E+  E+P  A  S  LQ L++GT+LYVV FE+LQRE+    +G++Q L ++ GF+ MV
Sbjct:  278 HKLVIAFCVGVELVSTGTKKLLVVLYMATFALVTPLGIGIGLGMTYHESSLESPQMALASVILQGLASGTLLYVVFFEVLQREKLGR-HGMVQFLSIMAGFIVMV 381          
BLAST of zinc transporter zip1 vs. nr
Match: gi|752892952|ref|XP_011264587.1| (PREDICTED: protein zntC isoform X1 [Camponotus floridanus])

HSP 1 Score: 96.6709 bits (239), Expect = 4.916e-21
Identity = 41/107 (38.32%), Postives = 73/107 (68.22%), Query Frame = 0
Query:    2 HKYVIAFCFGIELMANKTNKKLMIGYFFVFAIFSPLGIGMGIGINEAQSETPSYAFTSGTLQALSAGTILYVVVFEILQRERQKDVNGLLQLLVLVLGFVAMVLVEV 108
            HK VI+FC G+EL     + +  +GY  +F++ +P+GIG+G+ +   ++++ +   T   LQ ++AGT+LYVV FE+L RER  + +GLLQL+ +++GF  M+ +++
Sbjct:  341 HKLVISFCVGMELYVAGASTRATLGYLSIFSMVTPIGIGIGLALGHLKNDSENLGTTPTILQGMAAGTLLYVVFFEVLARERANEKSGLLQLVAIIVGFTLMLGLQI 447          
BLAST of zinc transporter zip1 vs. nr
Match: gi|1233213773|ref|XP_022206339.1| (zinc transporter ZIP1-like, partial [Nilaparvata lugens])

HSP 1 Score: 96.2857 bits (238), Expect = 5.169e-21
Identity = 47/108 (43.52%), Postives = 73/108 (67.59%), Query Frame = 0
Query:    2 HKYVIAFCFGIELMANKTNKKLMIGYFFVFAIFSPLGIGMGIGINEAQSETPSYAFTSGTLQALSAGTILYVVVFEILQRERQKDVNGLLQLLVLVLGFVAMVLVEVF 109
            HK VIAFC G+EL++++T   L++ Y   FA  +PLGIG+GI ++  Q +    +  +  LQ ++AGT+LYVV FE+LQRER    +G LQL+ ++ GF+ M+ ++V 
Sbjct:  335 HKLVIAFCVGVELVSSRTRLLLVVVYVATFAAVTPLGIGIGIALS-GQEDASGESLLTVVLQGMAAGTLLYVVFFEVLQRERANTQSGGLQLIAIITGFLVMLGIQVL 441          
BLAST of zinc transporter zip1 vs. nr
Match: gi|91078996|ref|XP_974675.1| (PREDICTED: zinc transporter ZIP1 [Tribolium castaneum] >gi|270003679|gb|EFA00127.1| Zinc transporter ZIP1-like Protein [Tribolium castaneum])

HSP 1 Score: 95.1301 bits (235), Expect = 6.405e-21
Identity = 50/108 (46.30%), Postives = 73/108 (67.59%), Query Frame = 0
Query:    2 HKYVIAFCFGIELMANKTNKKLMIGYFFVFAIFSPLGIGMGIGINEAQSETPSYAFTSGTLQALSAGTILYVVVFEILQRERQKDVNGLLQLLVLVLGFVAMVLVEVF 109
            HK VIAFC G+EL+ +KT   L++ Y   FA+ +PLGIG+G+ ++E  S   S   TS  LQ ++AGT+LYVV FE+L RER  + +G+ QLL ++LGF  M  +++ 
Sbjct:  241 HKLVIAFCVGVELVTSKTKLLLVVLYIGTFAVVTPLGIGIGLVLSE--SGNSSEDITSVVLQGMAAGTLLYVVFFEVLARERGNNHSGVWQLLAILLGFAVMFCLQIL 346          
BLAST of zinc transporter zip1 vs. nr
Match: gi|1070161429|ref|XP_018342933.1| (PREDICTED: protein zntB-like [Trachymyrmex septentrionalis])

HSP 1 Score: 96.2857 bits (238), Expect = 6.466e-21
Identity = 43/107 (40.19%), Postives = 72/107 (67.29%), Query Frame = 0
Query:    2 HKYVIAFCFGIELMANKTNKKLMIGYFFVFAIFSPLGIGMGIGINEAQSETPSYAFTSGTLQALSAGTILYVVVFEILQRERQKDVNGLLQLLVLVLGFVAMVLVEV 108
            HK VIAFC G+EL     + K  +GY  +FA+ +P+GI +G+ +   ++++ +   T   LQ ++AGT+LYVV FE+L RER  + +GLLQL+ +++GF  M+ +++
Sbjct:  345 HKLVIAFCVGMELYVAGASTKTTLGYLLIFAMVTPIGIAVGLVLAHFKNDSENLGPTPTILQGMAAGTLLYVVFFEVLARERANEKSGLLQLVAIIIGFTLMLGLQI 451          
The following BLAST results are available for this feature:
BLAST of zinc transporter zip1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 3
Match NameE-valueIdentityDescription
EMLSAG000000053338.417e-1937.96supercontig:LSalAtl2s:LSalAtl2s286:45599:179721:1 ... [more]
EMLSAG000000008334.246e-1535.92supercontig:LSalAtl2s:LSalAtl2s113:617429:618130:-... [more]
EMLSAG000000027101.115e-1133.03supercontig:LSalAtl2s:LSalAtl2s1563:26220:27095:-1... [more]
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BLAST of zinc transporter zip1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
gi|296452889|sp|Q9NP94.2|S39A2_HUMAN9.932e-827.78RecName: Full=Zinc transporter ZIP2; AltName: Full... [more]
gi|82202851|sp|Q6QQT1.1|S39A1_TAKRU8.136e-733.98RecName: Full=Zinc transporter ZIP1; AltName: Full... [more]

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BLAST of zinc transporter zip1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|939673537|ref|XP_014283084.1|7.524e-2447.71PREDICTED: zinc transporter ZIP1-like [Halyomorpha... [more]
gi|1101350504|ref|XP_018901201.1|2.459e-2348.04PREDICTED: zinc transporter ZIP3-like [Bemisia tab... [more]
gi|1325335283|ref|XP_023349468.1|5.214e-2348.15protein zntD-like [Eurytemora affinis][more]
gi|766931338|ref|XP_011497845.1|2.530e-2242.06PREDICTED: zinc transporter ZIP2-like [Ceratosolen... [more]
gi|321450802|gb|EFX62679.1|2.354e-2146.15hypothetical protein DAPPUDRAFT_67795 [Daphnia pul... [more]
gi|939260888|ref|XP_014250323.1|3.400e-2147.62zinc transporter ZIP3-like [Cimex lectularius][more]
gi|752892952|ref|XP_011264587.1|4.916e-2138.32PREDICTED: protein zntC isoform X1 [Camponotus flo... [more]
gi|1233213773|ref|XP_022206339.1|5.169e-2143.52zinc transporter ZIP1-like, partial [Nilaparvata l... [more]
gi|91078996|ref|XP_974675.1|6.405e-2146.30PREDICTED: zinc transporter ZIP1 [Tribolium castan... [more]
gi|1070161429|ref|XP_018342933.1|6.466e-2140.19PREDICTED: protein zntB-like [Trachymyrmex septent... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold9_size846264supercontigscaffold9_size846264:2649..3072 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold9_size846264-snap-gene-0.10-mRNA-1maker-scaffold9_size846264-snap-gene-0.10-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold9_size846264:2649..3072+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold9_size846264-snap-gene-0.10 ID=maker-scaffold9_size846264-snap-gene-0.10|Name=zinc transporter zip1|organism=Tigriopus kingsejongensis|type=gene|length=424bp|location=Sequence derived from alignment at scaffold9_size846264:2649..3072+ (Tigriopus kingsejongensis)
ATGCACAAGTATGTGATAGCGTTTTGCTTTGGAATCGAACTGATGGCCAA CAAGACCAACAAGAAACTCATGATCGGTTACTTCTTCGTGTTTGCCATTT TTAGTCCACTCGGCATTGGAATGGGCATAGGAATTAATGAAGCTCAGTCA GAGACTCCGTCATATGCATTCACCAGTGGCACACTTCAAGGTGGGTATAT TTAGAGATTATCATCTCTCCCCTATGTACGTAGAGTATCTACTGAACATT TCTATACATGTACTGTATATTCCTACTTTACTCCTAGCTCTCTCAGCGGG AACTATCCTCTACGTCGTAGTATTTGAAATTCTTCAGCGAGAACGTCAAA AAGATGTCAATGGTCTTTTGCAATTGCTCGTCCTGGTTTTGGGCTTTGTG GCCATGGTTTTGGTTGAAGTGTTT
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Synonyms
The feature 'zinc transporter zip1' has the following synonyms
Synonym
Tk08376
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