atp-dependent rna helicase ddx43, snap_masked-scaffold100_size373717-processed-gene-2.26 (gene) Tigriopus kingsejongensis

Overview


Name	atp-dependent rna helicase ddx43
Unique Name	snap_masked-scaffold100_size373717-processed-gene-2.26
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. L. salmonis genes
Match: EMLSAG00000007141 (supercontig:LSalAtl2s:LSalAtl2s402:374905:376772:1 gene:EMLSAG00000007141 transcript:EMLSAT00000007141 description:"maker-LSalAtl2s402-augustus-gene-4.12")

HSP 1 Score: 204.527 bits (519), Expect = 1.482e-59
Identity = 120/371 (32.35%), Postives = 194/371 (52.29%), Query Frame = 0

Query:  228 DIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKY-EYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDDDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQM 597
            D++  I   GF++PS IQ +    +L G+D+I  AQ+GTGKT  F +     ID       +      LVLSPTRELA+QI   +    +Y  ++     GG +  + ++ +  G  ++  TPGR+ D++    +    I  LVLDEAD ML+ GF+ QI  +   + P  Q  + SAT P  +  + S +M DP+ + V   D   +    Q  +    +E K D L D +  +    + +IF   K + D ++  +        S+HGD  Q +R+  + + +SG+ ++L+ TDV +RGID+Q ++ V NYD P N E Y+HR+GR+GR G+ G AI+ +   D       I+IL + +Q    ++ +M
Sbjct:   38 DLLRGIYAYGFEKPSAIQQRSIKPILKGRDVIAQAQSGTGKTATFSISILQSIDT------TMRETQCLVLSPTRELAVQIQKVLLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVYDMIRRRTLRTRGIKMLVLDEADEMLNKGFKEQIYDVYRYLPPFTQIALISATLPHEILEMTSKFMADPIRILVKR-DELTLEGXKQFFVAVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDAIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDD-------IRILRDIEQYYSTQIDEM 393

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. L. salmonis genes
Match: EMLSAG00000000395 (supercontig:LSalAtl2s:LSalAtl2s1063:103535:105763:1 gene:EMLSAG00000000395 transcript:EMLSAT00000000395 description:"augustus_masked-LSalAtl2s1063-processed-gene-0.12")

HSP 1 Score: 208.764 bits (530), Expect = 2.438e-58
Identity = 126/356 (35.39%), Postives = 194/356 (54.49%), Query Frame = 0

Query:  229 IMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKY--EYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVE-AGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDDDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIK 581
            ++  I    +  P+PIQA   P  L+G+D+ G A TGTGKT  +++P    +  +P    +R    V+VL PTREL +Q+  +V K   ++  I      GG D K Q   +    +I+IATPGRL D ++      +E+I  L+LDEADRMLD  F  Q+++I+    P RQT++ SAT    V  L++  ++ PV +FV S  + A +   + +    + E  R+ ++         D  I+F+  K +   +   LSL GV    +HG+ +Q  R ++L   K  E+ +L+ TDVA+RG+DI  +  V NY  P  +E Y+HRVGRT RAG+ G ++SI G  D     E++K
Sbjct:  193 LLKAIEXLRYVHPTPIQASTIPVALAGRDVCGCAATGTGKTAXYMLPILERLLFRPNQSITR----VIVLVPTRELGVQVY-QVSKQLSQFTSIDIALSVGGLDLKAQELALRKNPDIVIATPGRLIDHIKNTPTFGLENIEVLILDEADRMLDECFLEQMKEIVKSCSPKRQTLLFSATMTDKVNDLSTMALRKPVKIFVDSNKVVAWNLRQEFVRIRANRESDREGILAALVCRTFRDHTIVFIQTKVQCHRLLILLSLLGVRVGELHGNLSQPQRLESLKKFKEEEIDVLITTDVAARGLDISGVKTVINYTLPTTLEHYIHRVGRTARAGRAGRSVSIAGEGDRKMVREIVK 543

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. L. salmonis genes
Match: EMLSAG00000000249 (supercontig:LSalAtl2s:LSalAtl2s1036:82728:88820:1 gene:EMLSAG00000000249 transcript:EMLSAT00000000249 description:"maker-LSalAtl2s1036-augustus-gene-0.32")

HSP 1 Score: 200.675 bits (509), Expect = 8.834e-58
Identity = 114/342 (33.33%), Postives = 190/342 (55.56%), Query Frame = 0

Query:  233 IRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHID-NQPVPRGSRGGPNVLVLSPTRELALQIAGE-VEKYEYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDDDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSD 572
            I  +G+++PSPIQ    P  LSG+D++  A+ GTGKT A+ +P    ID +  V +G       +++ PTRELALQ +   +E  ++  +K +   GG + K+ +  +   V +++ATPGR+ DL+E GV  V +   + LDEAD++L   F+  + +++  +   RQ ++ SAT+P  V      +MK P  V    +D   +  +TQ+  F   + +K   L   F++++ +   IIF     R + ++  ++  G  C  IH   AQ  R +   D ++G  + LV +D+ +RGIDIQ +  V N+DFP+  E Y+HR+GR+GR G  G AI+++   D
Sbjct:   66 IFEKGWEKPSPIQEASIPVALSGRDILARAKNGTGKTGAYSIPILEQIDPSNDVIQG-------MIIVPTRELALQTSQICIELSKHRNVKVMVTTGGTNLKEDIMRIYEKVHLVVATPGRILDLIEKGVAKVMNCKVICLDEADKLLGHDFKGMLDRLIEHLPERRQILLXSATFPLTVEYFMKRHMKSPYEV--NLMDELTLKGITQYYAFVQ-ERQKVHCLNTLFTKLQINQS-IIFCNSTQRVELLAKKITELGYSCYYIHAKMAQTHRNRVFHDFRAGLCRNLVCSDLFTRGIDIQAVNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYDD 396

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. L. salmonis genes
Match: EMLSAG00000009885 (supercontig:LSalAtl2s:LSalAtl2s643:195185:200626:1 gene:EMLSAG00000009885 transcript:EMLSAT00000009885 description:"maker-LSalAtl2s643-augustus-gene-2.22")

HSP 1 Score: 199.519 bits (506), Expect = 2.652e-57
Identity = 112/261 (42.91%), Postives = 161/261 (61.69%), Query Frame = 0

Query:  339 TAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKIL----LDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDDDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRS---DWGSAEELIKILTEAQQEIPD 592
            T  V+I+IATPGRL DLV  G ++++++ + VLDEADRMLDMGF P++++I+    +  +  RQT+M SAT+P  V+  A+ ++ D V V VG +    V++  +   +     +KR  L D    +    K ++FV  K   D ++S LS   V   SIHGDR Q  REQAL D +SG+  +LV+T VA+RG+DI+ + +V NYD P+ ++EYVHRVGRTGR G  G A S    +   D   A EL+K+L E   EIP+
Sbjct:  163 TGRVDILIATPGRLLDLVSKGAVSLDAVQFFVLDEADRMLDMGFLPEVKRIVSEGNMCCKTSRQTLMFSATFPYEVQSCAAEFLNDYVFVTVGIV--GGVNTDVKQDFYQVEKFKKRQKLKDILDDV-GTLKTLVFVETKKNTDFLASWLSENNVPTTSIHGDRLQSQREQALADFRSGKYPVLVSTAVAARGLDIKGVEHVVNYDLPKTVDEYVHRVGRTGRVGNKGKATSFYDGNEPMDRTLAHELLKVLREGDIEIPE 420

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. L. salmonis genes
Match: EMLSAG00000000846 (supercontig:LSalAtl2s:LSalAtl2s1142:195200:196664:-1 gene:EMLSAG00000000846 transcript:EMLSAT00000000846 description:"augustus_masked-LSalAtl2s1142-processed-gene-1.9")

HSP 1 Score: 192.586 bits (488), Expect = 1.624e-54
Identity = 126/340 (37.06%), Postives = 190/340 (55.88%), Query Frame = 0

Query:  237 GFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKY-EYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGV-INVESITYLVLDEADRMLDMGFEPQIRKIL--LDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDDDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSD 572
            G+  PS IQ +  P  L+G+D+IG+A+TG+GKT AF +P    +  +P    +      LVL+PTRELA QI+ + EK  +  G+K V + GG D   Q  ++     IIIATPGRL D +E     ++ S+ YL++DEADR+L+M FE ++ KIL  L     R+ ++ SAT    V +L  + ++DPV V V S     V  + Q+ LF     + ++M +         +  IIF    +    ++  L   G     ++G  +Q  R  +L   K+    IL+ATDVASRG+DI  +  V NYD P + ++Y+HRVGRT RAG++G AI+ + + D
Sbjct:   43 GWKTPSKIQKEAIPVALTGRDIIGLAETGSGKTAAFALPVLQSLLEKPQRFFA------LVLTPTRELAYQISEQFEKLGKSIGVKCVVLVGGMDMVSQALVLGKKPHIIIATPGRLIDHMENTKGFDLRSLKYLIMDEADRILNMDFEIEVDKILSALPRGEGRKNMLFSATMTKKVAKLQRASLRDPVRVEVSS-KYQTVDKLLQYYLF--IPLKYKEMYLVHIINELAGNSFIIFSSTCSGTLKLALLLRNLGFTAIPLNGQMSQNKRLASLNKFKNKSRSILIATDVASRGLDIPHVDVVINYDIPTHSKDYIHRVGRTARAGRSGRAITFVCQYD 373

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. L. salmonis genes
Match: EMLSAG00000012967 (supercontig:LSalAtl2s:LSalAtl2s98:1266421:1269115:1 gene:EMLSAG00000012967 transcript:EMLSAT00000012967 description:"maker-LSalAtl2s98-augustus-gene-12.20")

HSP 1 Score: 195.667 bits (496), Expect = 1.271e-53
Identity = 113/345 (32.75%), Postives = 193/345 (55.94%), Query Frame = 0

Query:  228 DIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQ-IAGEVEKYEYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNS-DEEKRDMLMDFFSQM-EDDDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMG 569
            ++   I+ +G+  P+PIQ +  P +L G+D++G+A+TG+GKT AFL+P       + +  G+RG P  ++LSPTREL+LQ +    E  ++ G+K++ + GG   ++Q   +    +++IATPGR   L     + +++I Y+V DEADR+ ++GF  Q+++IL  +  DRQT++ SAT P  +   A + + DP  V    LD+      T  + F +  DE K  +L+    ++   +++ I+F+  +   + I   L    +    I+       R+       S +  +L+ TD+A+RGIDI  +  V NY FP   + ++HRVGR  RAG++G AIS + 
Sbjct:   41 EVFRGIQKKGYKVPTPIQRKTIPLILEGRDVVGMARTGSGKTGAFLIPLL-----EKLCSGNRGKPRAMILSPTRELSLQTLRFFKELAKFSGLKAMSILGGESMEKQFAGMHNNPDVLIATPGRFVHLCVEMNLRLDAIQYVVFDEADRLFELGFGEQLKEILGRLSDDRQTLLFSATLPKLLVEFAKAGLNDPTLV---RLDVDTKIPETLSLAFISCRDEGKPALLVHILQKLIAKEEQTIVFLATRHHVEYIHLLLDSAEISNTYIYSQLDPSARKINTAKFTSNQCSVLLVTDLAARGIDIPLLDNVINYHFPAKSKLFIHRVGRVARAGRSGLAISFVA 377

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. L. salmonis genes
Match: EMLSAG00000002659 (supercontig:LSalAtl2s:LSalAtl2s153:555306:559625:1 gene:EMLSAG00000002659 transcript:EMLSAT00000002659 description:"maker-LSalAtl2s153-augustus-gene-5.7")

HSP 1 Score: 183.726 bits (465), Expect = 3.091e-50
Identity = 123/358 (34.36%), Postives = 194/358 (54.19%), Query Frame = 0

Query:  224 HPFPDIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEV-EKYEYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLND-LVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLAS-SYMKDPVTVFVGSLD---LAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDDDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRA-GKTGTAISIMGRSDWG 574
            H   + +  I+  GF + + IQAQ  P+LL G+DL+G A+TG+GKTL+FL+P    I    +    R G  V+++SPTREL++Q  G + E  +YH      V GG +R  + + +  G+ I++ATPGRL D L        +++  L++DEADR+LD+GFE +++KI+  +   RQT++ SAT       L   +  K+P+ + + S +    A V  + Q  +   S  EKR +L+  F +     KV++F              +   +  QSIHG + Q  R        + +  IL+ TDVA+RG+DI D+ ++  YD   + +EY+HRVGRT R  G  G A+ I+   + G
Sbjct:  125 HICDNTLNGIQDMGFSQMTEIQAQTIPHLLEGRDLVGAAKTGSGKTLSFLIPAVELI--YKLKFMPRNGTGVIIISPTRELSMQTFGVLRELLKYHCHTYGLVMGGANRNTEAQKLNKGINIVVATPGRLLDHLRNTKDFLYKNLQCLIIDEADRILDVGFEEEMKKIIQLLPKKRQTMLFSATTTKKTEDLVKLALKKEPIYIGIDSANDNGAATVSGLEQGYVICPS--EKRLLLLFTFLKKNRKKKVMVFFSSCMSVKYHHELFNYIDLPVQSIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPDVDWIVQYDPTDDPKEYIHRVGRTARGEGGKGHALLILRPEEVG 478

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. L. salmonis genes
Match: EMLSAG00000006912 (supercontig:LSalAtl2s:LSalAtl2s391:287461:291724:1 gene:EMLSAG00000006912 transcript:EMLSAT00000006912 description:"maker-LSalAtl2s391-augustus-gene-3.7")

HSP 1 Score: 177.563 bits (449), Expect = 1.501e-49
Identity = 116/371 (31.27%), Postives = 191/371 (51.48%), Query Frame = 0

Query:  228 DIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKY-EYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDDDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQM 597
            D++  I   GF++PS IQ +     +  +D I  AQ+GTGKT  F +     ID       S      L+L+PTRELA QI   V    ++         GG      ++ +  G  I++ TPGR+ D++    +  E+I   VLDEAD ML  GF+ QI  +   +  D Q V+ SAT P  V  +   +M+DP+ + V   +L  +  + Q  +F   +E K   L D +  +    + +IF   + +   ++  + L+     S+HG+ +Q +RE  + + +SG  ++L+ TD+ +RGID+Q I+ V NYD P N E Y+HR+GR GR G+ G AI+ +   D  + +++ K      +E+P ++  +
Sbjct:   50 DLLRGIYSFGFEKPSAIQQRAIVPCIKTRDAIAQAQSGTGKTATFSIAILQKID------ISMNRTQALILAPTRELAQQIQKVVLSLGDFLKATCYACIGGRSISSDIRALEHGPHIVVGTPGRVFDMITREHLRTENIKMFVLDEADEMLSRGFKEQIYDVFRHLNQDIQVVLMSATMPDDVLDVTKRFMRDPIRILVRKEELT-LEGILQFYVFVEKEEWKLSTLCDLYETLTIT-QAVIFCNTRRKVCWLTEKMGLKHFTVSSMHGEMSQEEREVIMREFRSGSSRVLITTDLLARGIDVQQISLVINYDLPVNKENYIHRIGRGGRFGRKGVAINFITEGDRMALQDIEKHYHTQIEEMPKDVANL 412

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. L. salmonis genes
Match: EMLSAG00000005732 (supercontig:LSalAtl2s:LSalAtl2s309:725565:728317:1 gene:EMLSAG00000005732 transcript:EMLSAT00000005732 description:"maker-LSalAtl2s309-augustus-gene-7.79")

HSP 1 Score: 171.785 bits (434), Expect = 4.085e-46
Identity = 112/362 (30.94%), Postives = 185/362 (51.10%), Query Frame = 0

Query:  219 FEHAFHPFPDIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKYEYHGIK-SVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSD-------EEKRDMLMDFFSQMEDDDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSD 572
            FEH F     I+  ++  G+  PSPIQ    PY L+G D +  +++GTGKTL +++     ID   V      G   L+++PTRE+A+Q A  + +   H  K     + GG   ++ K+      +   +PGR+  L+E GV+NV  +   +LDEAD++ +  F+  +  I+  +    QT+  SAT+P  +     S +K+P  V +G  D   +  V Q +L   S        + K + L+   S +   ++ I+F     RA  I   L+ +G     + G + Q DR  +L DLK+   +I++ TD+++RGID + + +V N+D P     Y+HR+GR GR G  G A++I  + D
Sbjct:   22 FEH-FQFQSPILEGLKVNGYQVPSPIQVSALPYTLAGLDXLVQSKSGTGKTLVYVLSALSSID---VESNELQG---LLIAPTREIAVQGAQTMLEIGGHLSKLKASTFIGGMSVEEDKLKLKKCHMAFGSPGRVKQLIEEGVMNVSQLKVFILDEADKLCEKSFKEDLSWIMRTLPEIHQTLALSATFPNSLENTLISKLKNPTHVRLGQ-DCQVLLGVNQFVLESPSHGLVKKVVDYKFESLLKLISNV-SFEQCIVFCNYSLRARAICDKLNDRGWPAIFLAGMQEQKDRLNSLKDLKTFRCRIVLTTDLSARGIDARHVNFVINFDVPSQGTTYLHRIGRAGRYGSKGIALTIASKGD 374

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. L. salmonis genes
Match: EMLSAG00000012740 (supercontig:LSalAtl2s:LSalAtl2s967:89676:95604:1 gene:EMLSAG00000012740 transcript:EMLSAT00000012740 description:"augustus_masked-LSalAtl2s967-processed-gene-0.13")

HSP 1 Score: 168.318 bits (425), Expect = 4.416e-45
Identity = 113/422 (26.78%), Postives = 207/422 (49.05%), Query Frame = 0

Query:  215 PCTQFEHAFHPFPDIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKYEYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGV-INVESITYLVLDEADRMLD----MGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDDDK--VIIFVGKKARADDISSDLSLQGVV-CQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQMAQRYTRMKEKRADERETRGGGRGGGRGGGRG 628
            P T +       P+ +  +    +  P+PIQAQ  P +L G+D++G A TG+GKT A+L+P  ++ +   +          ++L PTREL+ QI  E  K      ++        +  Q      G  ++I+TP  L  L++ G  ++++S+ +L++DE+D++ +      F  Q+  +       ++    SAT    V     + + + V+V +G  +  A   V Q +++  S++ K   L +    + D  K  V+IFV    RAD++   L+ Q  +  + IH  R+   RE A+   ++G   +L+ T++ SRGID++ +  V NYDFP +   Y+HRVGRTGRAG+ G A++     D      + +I++ +   +P+ + ++ +   + K + A     R   +G  +   R 
Sbjct:   64 PLTNWWDLSGSLPEGLIEMVSSLYPNPTPIQAQSIPIMLQGRDVLGSAPTGSGKTAAYLLPILVNQEKNKL--------KTIILCPTRELSHQIHQEALKLIPPNYQTKVQVASSKKSNQ------GANVLISTPNTLVYLIKDGSSLDLKSLEWLIVDESDKLFEDKGKASFREQLAVVYKACMSSKKAFF-SATLATDVENWCKTNLDNAVSVTIGIRN-KACKDVKQSLVYTGSEKGKNYALTNL---INDGIKPPVLIFVQDFERADELKEILTKQKKIKAEVIHSHRSLLQREDAIKTFRAGRTWVLICTELMSRGIDVKGVNLVINYDFPPSTVSYIHRVGRTGRAGRPGRAVTFFTDDDKVLLRSIAQIVSSSGNNVPEFMLKLKKASRQEKRRLASNGIERDSVKGESKYDKRN 466

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. SwissProt
Match: gi|145559466|sp|Q9NXZ2.2|DDX43_HUMAN (RecName: Full=Probable ATP-dependent RNA helicase DDX43; AltName: Full=Cancer/testis antigen 13; Short=CT13; AltName: Full=DEAD box protein 43; AltName: Full=DEAD box protein HAGE; AltName: Full=Helical antigen)

HSP 1 Score: 560.066 bits (1442), Expect = 0.000e+0
Identity = 284/599 (47.41%), Postives = 390/599 (65.11%), Query Frame = 0

Query:   36 GEWGRTTDPPPSVGRGRGARRGEVHGTSLHIKSSDVGRLIGTKGRQIQELRQKSGARIDVGEECSDRKLKFTEVILGGADDTVAEAKRMIEELLG-LQDKYQSASQIDTSV--------------------AIDWSEINRQHDVAQKERWLRCPTLIKDFYEEHPEVNAMGSEVVDQFRADNYNIVVSNFDETNVTPFMKPCTQFEHAFHPFPDIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKYEYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDDDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQMAQRYTRMKEKRADERE 613
            G W  T+ PP +V  G      E       +KS  VG +IG  G +I+ ++  +   I + +E  +  +K     + G+     +AK +I+  +  L++ Y S   IDT+                      IDW +I  +    QK +W   P + K+FY+E    +AM     D +R +N+NI   +  +    P   P   F+ AF  +P++M  I+  GF +P+PIQ+Q WP +L G DLIG+AQTGTGKTL +LMP FIH+  QP  +G R  P +LVL+PTRELALQ+ GE  KY Y G++SVCVYGGG+R +Q++ +  GV+IIIATPGRLNDL  +  +N+++ITYLVLDEAD+MLDMGFEPQI KILLD+RPDRQTVMTSATWP  V RLA SY+K+P+ V+VG+LDL AV SV Q+I+   ++EEK   +  F   M   DKVI+FV +KA AD +SSDL L  +  +S+HGDR Q DRE+AL + K+G+V+IL+ATD+ASRG+D+ D+T+V+N+DFPRNIEEYVHR+GRTGRAG+TG +I+ + R+DW  A ELI IL  A Q IP+EL  MA+R+   ++KR  ER+
Sbjct:   49 GRWRGTSRPPEAVAAGH-----EELPLCFALKSHFVGAVIGRGGSKIKNIQSTTNTTIQIIQEQPESLVK-----IFGSKAMQTKAKAVIDNFVKKLEENYNSECGIDTAFQPSVGKDGSTDNNVVAGDRPLIDWDQIREEGLKWQKTKWADLPPIKKNFYKESTATSAMSKVEADSWRKENFNITWDDLKDGEKRPIPNPTCTFDDAFQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKGLRSVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIV-TTEEEKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASELINILERANQSIPEELVSMAERFKAHQQKREMERK 636

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. SwissProt
Match: gi|143811384|sp|Q86TM3.3|DDX53_HUMAN (RecName: Full=Probable ATP-dependent RNA helicase DDX53; AltName: Full=Cancer-associated gene protein; AltName: Full=Cancer/testis antigen 26; Short=CT26; AltName: Full=DEAD box protein 53; AltName: Full=DEAD box protein CAGE)

HSP 1 Score: 528.865 bits (1361), Expect = 4.269e-180
Identity = 262/576 (45.49%), Postives = 378/576 (65.62%), Query Frame = 0

Query:   64 LHIKSSDVGRLIGTKGRQIQELRQKSGARIDVGEECSDRKLKFTEVILGGADDTVAEAKRMIEELLGLQDKYQSASQIDTSVA--------------------IDWSEINRQHDVAQKERWLRCPTLIKDFYEEHPEVNAMGSEVVDQFRADNYNIVVSNFDETNVTPFMKPCTQFEHAFHPFPDIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKYEYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDDDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQMAQRYTRMKEKRADERETRGGGR 619
              IK++ VG +IG  G +I++L+  +  +I +    S+ K++     + G  +  A+AK  IE L+  Q+ Y S S +D + +                     +W  I       +K +W   P + K+FY E    + M    V  +R +N+NI   +          KP  +F+ AF  +PD++ +I   G  +P+PIQ+Q WP +L G DLI +AQTGTGKTL++LMP FIH+D+QP+ R  R GP +LVL+PTRELAL +  E  KY Y G+KS+C+YGG +R  Q++ ++ GV+IIIATPGRLNDL     +N+ SITYLV+DEAD+MLDM FEPQIRKILLD+RPDRQTVMTSATWP  VR+LA SY+KDP+ V+VG+L+L AV++V Q+I+   +++EKR +  +F   M  +DKVI+FV +K  ADD+SSD ++QG+  +S+HG+  Q D+E+A+ D KSG +KIL+ TD+ SRG+D+ D+T+V+NYDFPRNI+ YVHRVG  GR GKTGT+++++ + D   A ELIKIL  A Q +P++L  MA++Y   ++KR  E  +R  G+
Sbjct:   53 FKIKNNMVGVVIGYSGSKIKDLQHSTNTKIQIINGESEAKVR-----IFGNREMKAKAKAAIETLIRKQESYNSESSVDNAASQTPIGRNLGRNDIVGEAEPLSNWDRIRAAVVECEKRKWADLPPVKKNFYIESKATSCMSEMQVINWRKENFNITCDDLKSGEKRLIPKPTCRFKDAFQQYPDLLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISREQRNGPGMLVLTPTRELALHVEAECSKYSYKGLKSICIYGGRNRNGQIEDISKGVDIIIATPGRLNDLQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRKILLDVRPDRQTVMTSATWPDTVRQLALSYLKDPMIVYVGNLNLVAVNTVKQNIIV-TTEKEKRALTQEFVENMSPNDKVIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQERAVEDFKSGNIKILITTDIVSRGLDLNDVTHVYNYDFPRNIDVYVHRVGYIGRTGKTGTSVTLITQRDSKMAGELIKILDRANQSVPEDLVVMAEQYKLNQQKRHRETRSRKPGQ 622

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. SwissProt
Match: gi|442570094|sp|Q1DP69.2|DBP2_COCIM (RecName: Full=ATP-dependent RNA helicase DBP2)

HSP 1 Score: 410.223 bits (1053), Expect = 5.139e-135
Identity = 215/436 (49.31%), Postives = 298/436 (68.35%), Query Frame = 0

Query:  167 CPTLIKDFYEEHPEVNAMGSEVVDQFRADNYNIVVSNFDETNVTPFMKPCTQFEHAFHPFPDIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKY-EYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDD--DKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQMAQ 599
             P   K FY+EHP V    ++ V+ FR ++   V       NV    +P   F+ A  P   +++ ++ QGF +P+PIQ+QGWP  LSG+D++GIA+TG+GKTL + +P  +HI+ QP+  G   GP VLVL+PTRELA+QI  E+ K+ +   I++ CVYGG  R  Q++ ++ GVE+ IATPGRL D++EAG  N+  +TYLVLDEADRMLDMGFEPQIRKI+  IRPDRQT M SATWP  VR+LA  ++ D + V++GS DL+A H +TQ I+   SD EKRD +++   ++ DD   K++IF G K  ADDI+  L   G    SIHGD+ Q +R+  L + K+G+  I+VATDVASRGID++DIT+V NYD+P N E+YVHR+GRTGRAG  GTAI++    +   A +L+ ILTE++Q+I   L +MA+
Sbjct:   85 LPKFEKHFYKEHPNVTNRSAQDVEAFRKEHEMTVYGK----NVP---RPVETFDEAGFP-QYVISEVKAQGFAKPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPL-LGPGDGPIVLVLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPRGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQLAHDFLHDYIQVYIGSQDLSANHRITQ-IVEIVSDFEKRDRMINHLERIMDDKKSKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITLFTTDNAKQARDLVNILTESKQQIDPRLAEMAR 510

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. SwissProt
Match: gi|74660243|sp|Q6CIV2.1|DBP2_KLULA (RecName: Full=ATP-dependent RNA helicase DBP2)

HSP 1 Score: 409.453 bits (1051), Expect = 1.205e-134
Identity = 218/440 (49.55%), Postives = 295/440 (67.05%), Query Frame = 0

Query:  167 CPTLIKDFYEEHPEVNAMGSEVVDQFRADNYNIVVSNFDETNVTPFMKPCTQFEHAFHPFPDIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKYEYHG-IKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFF--SQMEDDDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQMAQRYTR 603
             P   K+FY+EHP+V  M    V +FR +N  + +S  D        KP   F+ A  P   ++  ++ +GF +P+ IQ QGWP  LSG+D+IG+A TG+GKTL++ +P  +HI+ QP+      GP VLVL+PTRELA+QI  E  K+     I++ CVYGG  + QQ++ +  GVEI+IATPGRL D++E G  N++ +TYLVLDEADRMLDMGFEPQIRKI+  IRPDRQT+M SATWP  V++LAS Y+ DP+ V +GSL+L+A H++TQ I+   +D EKRD L      +  + D K+IIF   K   D+I+S L  +G    +IHGD+AQ +R+  L + +SG   I+VATDVA+RGID++ I YV NYD P NIE+YVHR+GRTGRAG TGTAIS     +      LIKI+ EA+Q+IP+EL    +RY R
Sbjct:   70 LPVFEKNFYQEHPDVAQMSESEVIEFRKEN-EMTISGHD------VPKPIRSFDEAGFP-SYVLDEVKQEGFAKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPL-LSPGDGPIVLVLAPTRELAVQIQKECSKFGASSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLASDYLHDPIQVQIGSLELSASHTITQ-IVEVLTDFEKRDRLAKHLETASQDQDSKIIIFASTKRTCDEITSYLRTEGWPALAIHGDKAQNERDWVLAEFRSGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGSTGTAISFFTEGNKSLGAALIKIMREAKQDIPEEL----RRYDR 495

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. SwissProt
Match: gi|134034064|sp|A1C6C4.1|DBP2_ASPCL (RecName: Full=ATP-dependent RNA helicase dbp2)

HSP 1 Score: 407.912 bits (1047), Expect = 5.076e-134
Identity = 215/444 (48.42%), Postives = 300/444 (67.57%), Query Frame = 0

Query:  160 QKERW--LRCPTLIKDFYEEHPEVNAMGSEVVDQFRADNYNIVVSNFDETNVTPFMKPCTQFEHAFHPFPDIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKY-EYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDD--DKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQMA 598
            +K+ W     P   K FY+EHP+V A     VD+FR ++   V       NV    +P   F+ A  P   +++ ++ QGF+RP+ IQ+QGWP  LSG+D++GIA+TG+GKTL + +P  +HI+ QP+      GP VLVL+PTRELA+QI  E+ K+ +   I++ CVYGG  +  Q++ ++ GVE+ IATPGRL D++EAG  N+  +TYLVLDEADRMLDMGFEPQIRKI+  IRPDRQT M SATWP  VR+LAS ++ D + V +GS+DL+A H +TQ I+   SD EKRD ++    ++ +D  +K++IF G K  AD+I+  L   G    SIHGD+ Q +R+  L + K+G+  I+VATDVASRGID++DIT+V NYD+P N E+Y+HR+GRTGRAG  GTAI+     +   A +L+ ILTEA+Q+I   L +M 
Sbjct:   73 KKQEWDLETLPKFEKSFYKEHPDVTARSQREVDEFRQEHKMTVQGK----NVP---RPVETFDEAGFP-QYVLSEVKSQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPL-LAPGDGPIVLVLAPTRELAVQIQTEITKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQLASDFLNDYIQVNIGSMDLSANHRITQ-IVEVVSDFEKRDKMIKHLEKIMEDRSNKILIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKAGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTDNSKQARDLVTILTEAKQQIDPRLAEMV 506

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. SwissProt
Match: gi|160380609|sp|A7E449.1|DBP2_SCLS1 (RecName: Full=ATP-dependent RNA helicase dbp2)

HSP 1 Score: 407.912 bits (1047), Expect = 8.906e-134
Identity = 221/445 (49.66%), Postives = 298/445 (66.97%), Query Frame = 0

Query:  160 QKERW--LRCPTLIKDFYEEHPEVNAMGSEVVDQFRADNYNIVVSNFDETNVTPFMKPCTQFEHAFHPFPDIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKY-EYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQ-MED-DDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQMAQ 599
            QK+ W     P   K FY+E P V A   E V +FRA  +NI V   +        KP   F+ A  P   +M  ++ QGF  P+PIQ+QGWP  LSG+D++GIA+TG+GKTL + +P  +HI+ QP+      GP VLVL+PTRELA+QI  E+ K+ +   I++ CVYGG  +  Q++ +  GVE+ IATPGRL D++E+G  N+  +TYLVLDEADRMLDMGFEPQIRKIL  IRPDRQT M SATWP  VR LAS Y+ D + V +GSL+L+A H +TQ I+   S+ EKRD +     + MED D+K++IF G K  ADDI+  L   G    SIHGD+ Q +R+  L + K+G+  I+VATDVASRGID+++IT+VFNYD+P N E+Y+HR+GRTGRAG+ GTAI++    +   A +L+ +LTEA+Q I   L +M +
Sbjct:   97 QKQNWDLNTLPKFEKSFYKEDPVVAARSEEDVAKFRA-QHNIAVQGPN------IPKPVETFDEAGFP-AYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPL-LAPGDGPIVLVLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDMIESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKILGQIRPDRQTCMWSATWPKEVRALASDYLNDFIQVNIGSLELSANHRITQ-IVEVVSEFEKRDKMTKHLEKIMEDKDNKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRIGRTGRAGQKGTAITLFTTDNQKQARDLVNVLTEAKQVIDPRLAEMTR 531

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. SwissProt
Match: gi|160380700|sp|A6SFW7.2|DBP2_BOTFB (RecName: Full=ATP-dependent RNA helicase dbp2)

HSP 1 Score: 405.216 bits (1040), Expect = 1.727e-133
Identity = 220/444 (49.55%), Postives = 297/444 (66.89%), Query Frame = 0

Query:  160 QKERW--LRCPTLIKDFYEEHPEVNAMGSEVVDQFRADNYNIVVSNFDETNVTPFMKPCTQFEHAFHPFPDIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKY-EYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQ-MED-DDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQMA 598
            QK+ W     P   K FY+E P V A   E V +FRA  +NI V   +        KP   F+ A  P   +M  ++ QGF  P+PIQ+QGWP  LSG+D++GIA+TG+GKTL + +P  +HI+ QP+      GP VLVL+PTRELA+QI  E+ K+ +   I++ CVYGG  +  Q++ +  GVE+ IATPGRL D++E+G  N+  +TYLVLDEADRMLDMGFEPQIRKIL  IRPDRQT M SATWP  VR LAS Y+ + + V +GSL+L+A H +TQ I+   S+ EKRD +     + MED D+K++IF G K  ADDI+  L   G    SIHGD+ Q +R+  L + K+G+  I+VATDVASRGID+++IT+VFNYD+P N E+Y+HR+GRTGRAG+ GTAI++    +   A +L+ +LTEA+Q I   L +M 
Sbjct:   50 QKQNWDLSTMPKFEKSFYKEDPVVAARSEEDVAKFRA-QHNIAVQGPN------IPKPVETFDEAGFP-AYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPL-LAPGDGPIVLVLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDMIESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKILGQIRPDRQTCMWSATWPKEVRALASDYLNEFIQVNIGSLELSANHRITQ-IVEVVSEFEKRDKMTKHLEKIMEDKDNKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRIGRTGRAGQKGTAITLFTTDNQKQARDLVNVLTEAKQVIDPRLAEMT 483

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. SwissProt
Match: gi|118284|sp|P24783.1|DBP2_YEAST (RecName: Full=ATP-dependent RNA helicase DBP2; AltName: Full=DEAD box protein 2; AltName: Full=p68-like protein)

HSP 1 Score: 405.601 bits (1041), Expect = 3.538e-133
Identity = 217/443 (48.98%), Postives = 292/443 (65.91%), Query Frame = 0

Query:  162 ERWLRCPTLIKDFYEEHPEVNAMGSEVVDQFRADNYNIVVSNFDETNVTPFMKPCTQFEHAFHPFPD-IMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKYEYHG-IKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDDD--KVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQMAQR 600
            E   + PT  K+FY EH  V       + QFR +N  + +S  D        KP T F+ A   FPD ++  ++ +GFD+P+ IQ QGWP  LSG+D++GIA TG+GKTL++ +P  +HI+ QP+      GP VLVL+PTRELA+QI  E  K+ +   I++ CVYGG  + QQ++ ++ G EI+IATPGRL D++E G  N++ +TYLVLDEADRMLDMGFEPQIRKI+  IRPDRQT+M SATWP  V++LA+ Y+ DP+ V VGSL+L+A H++TQ I+   SD EKRD L  +      D+  K +IF   K   DDI+  L   G    +IHGD+ Q +R+  L + ++G   I+VATDVA+RGID++ I YV NYD P NIE+YVHR+GRTGRAG TGTAIS     + G   +LI I+ EA Q IP EL +  +R
Sbjct:   65 EELPKLPTFEKNFYVEHESVRDRSDSEIAQFRKEN-EMTISGHD------IPKPITTFDEA--GFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPL-LAPGDGPIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQ-IVEVVSDFEKRDRLNKYLETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISIMREANQNIPPELLKYDRR 496

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. SwissProt
Match: gi|160380611|sp|A6ZRX0.1|DBP2_YEAS7 (RecName: Full=ATP-dependent RNA helicase DBP2; AltName: Full=DEAD box protein 2; AltName: Full=p68-like protein)

HSP 1 Score: 405.216 bits (1040), Expect = 3.983e-133
Identity = 217/443 (48.98%), Postives = 292/443 (65.91%), Query Frame = 0

Query:  162 ERWLRCPTLIKDFYEEHPEVNAMGSEVVDQFRADNYNIVVSNFDETNVTPFMKPCTQFEHAFHPFPD-IMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKYEYHG-IKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDDD--KVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQMAQR 600
            E   + PT  K+FY EH  V       + QFR +N  + +S  D        KP T F+ A   FPD ++  ++ +GFD+P+ IQ QGWP  LSG+D++GIA TG+GKTL++ +P  +HI+ QP+      GP VLVL+PTRELA+QI  E  K+ +   I++ CVYGG  + QQ++ ++ G EI+IATPGRL D++E G  N++ +TYLVLDEADRMLDMGFEPQIRKI+  IRPDRQT+M SATWP  V++LA+ Y+ DP+ V VGSL+L+A H++TQ I+   SD EKRD L  +      D+  K +IF   K   DDI+  L   G    +IHGD+ Q +R+  L + ++G   I+VATDVA+RGID++ I YV NYD P NIE+YVHR+GRTGRAG TGTAIS     + G   +LI I+ EA Q IP EL +  +R
Sbjct:   65 EELPKLPTFEKNFYVEHESVRDRSDSEIAQFRKEN-EMTISGHD------IPKPITTFDEA--GFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPL-LAPGDGPIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQ-IVEVVSDFEKRDRLNKYLETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISIMREANQNIPPELLKYDRR 496

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. SwissProt
Match: gi|91206537|sp|Q4X195.2|DBP2_ASPFU (RecName: Full=ATP-dependent RNA helicase dbp2)

HSP 1 Score: 403.675 bits (1036), Expect = 1.875e-132
Identity = 212/438 (48.40%), Postives = 298/438 (68.04%), Query Frame = 0

Query:  168 PTLIKDFYEEHPEVNAMGSEVVDQFRADNYNIVVSNFDETNVTPFMKPCTQFEHAFHPFPDIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKY-EYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDD--DKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQMAQRYT 602
            P   K FY+EHP+V A     V++FR  +   V       NV    +P   F+ A  P   +++ ++ QGF+RP+ IQ+QGWP  LSG+D++GIA+TG+GKTL + +P  +HI+ QP+      GP VL+L+PTRELA+QI  E+ K+ +   I++ CVYGG  +  Q++ ++ GVE+ IATPGRL D++EAG  N+  +TYLVLDEADRMLDMGFEPQIRKI+  IRPDRQT M SATWP  VR+LA+ ++ D + V +GS+DL+A H +TQ I+   SD EKRD ++    ++ ++  +K +IF G K  AD+I+  L   G    SIHGD+ Q +R+  L + K+G+  I+VATDVASRGID++DIT+V NYD+P N E+Y+HR+GRTGRAG  GTAI+     +   A +L+ ILTEA+Q+I   L +MA RY+
Sbjct:   79 PKFEKSFYKEHPDVAARSEREVEEFRKKHEMTVQGR----NVP---RPVENFDEAGFP-QYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPL-LAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTCMWSATWPKEVRQLATDFLNDYIQVNIGSMDLSANHRITQ-IVEVVSDFEKRDKMIKHLEKIMENRSNKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQARDLVTILTEAKQQIDPRLAEMA-RYS 505

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. nr
Match: gi|1227965477|ref|XP_021914078.1| (probable ATP-dependent RNA helicase DDX43 isoform X2 [Zootermopsis nevadensis] >gi|1227965479|ref|XP_021914079.1| probable ATP-dependent RNA helicase DDX43 isoform X2 [Zootermopsis nevadensis] >gi|1227965481|ref|XP_021914080.1| probable ATP-dependent RNA helicase DDX43 isoform X2 [Zootermopsis nevadensis])

HSP 1 Score: 696.427 bits (1796), Expect = 0.000e+0
Identity = 349/582 (59.97%), Postives = 428/582 (73.54%), Query Frame = 0

Query:   62 TSLHIKSSDVGRLIGTKGRQIQELRQKSGARIDVGEECSDRKLKFTEVILGGADDTVAEAKRMIEELLG-------------------LQDKYQSASQIDTSVAIDWSEINRQHDVAQKERWLRCPTLIKDFYEEHPEVNAMGSEVVDQFRADNYNIVVSNFDETNVTPFMKPCTQFEHAFHPFPDIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKYEYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDDDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQMAQRYTRMKEKRADERETRGGGRGGGRG 624
            T + IKSSDVG++IG  G +I+EL+ +SGA I +G+   +   + T VI+ G+ ++VA+AK++IE+ L                    +     S S+      I+W+E+NR +D AQKERW +CP L+KDFY E P V +M  E V + R +  NIVV+   E        P   FE  F  +PDI+  I  Q F+ PSPIQ Q WP LL G DLIGIAQTGTGKTLAFL+P  IHID QPVPR  RGG NVLV++PTRELALQI  EV+KY Y  IK VCVYGGG+R++Q+ +V  G+EIIIATPGRLNDLV AG+I+V+S+TYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWP GVRRLA SYMK+P+ VF+G+LDLAAVHSVTQ I     +E+K  +L +F   ME DDKVI+FVGKK RADDISS+LSL+G+ CQSIHG+R Q DREQAL DLK+GEV+IL+ATDVASRGIDI+D+T++FNYDFPRNIEEYVHRVGRTGRAGKTG +IS++ R DW  A+ELI IL EA QE+P+EL +MA+R+   KEK+A E+E       G RG
Sbjct:   99 TKVMIKSSDVGKVIGKGGSKIRELQGESGAHIQIGKPSDEDFGQTTSVIVSGSGESVAKAKQLIEDFLNNFNSRSNGSSGNISGSGNGVYGTAVSESEPKKPPVINWAEVNRIYDEAQKERWNKCPPLLKDFYIEDPHVASMLPEEVQKLRKEKNNIVVTYVFEEGENAIPNPVRTFEQCFAHYPDILEEIYKQNFEVPSPIQCQAWPILLKGHDLIGIAQTGTGKTLAFLLPALIHIDKQPVPRSQRGGANVLVMAPTRELALQIEKEVKKYSYRNIKCVCVYGGGNRREQVNLVAEGIEIIIATPGRLNDLVMAGIIDVKSVTYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPEGVRRLAQSYMKNPIQVFIGTLDLAAVHSVTQRIEL-IKEEDKSALLREFIDNMEPDDKVIVFVGKKTRADDISSELSLEGIKCQSIHGNREQYDREQALEDLKTGEVRILIATDVASRGIDIEDVTHIFNYDFPRNIEEYVHRVGRTGRAGKTGESISLITREDWAQAKELIAILEEANQEVPEELTKMAERFNVWKEKKAAEKERERMDLRGCRG 679

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. nr
Match: gi|1227965475|ref|XP_021914077.1| (probable ATP-dependent RNA helicase DDX43 isoform X1 [Zootermopsis nevadensis] >gi|646720603|gb|KDR22264.1| putative ATP-dependent RNA helicase DDX43 [Zootermopsis nevadensis])

HSP 1 Score: 696.041 bits (1795), Expect = 0.000e+0
Identity = 349/582 (59.97%), Postives = 428/582 (73.54%), Query Frame = 0

Query:   62 TSLHIKSSDVGRLIGTKGRQIQELRQKSGARIDVGEECSDRKLKFTEVILGGADDTVAEAKRMIEELLG-------------------LQDKYQSASQIDTSVAIDWSEINRQHDVAQKERWLRCPTLIKDFYEEHPEVNAMGSEVVDQFRADNYNIVVSNFDETNVTPFMKPCTQFEHAFHPFPDIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKYEYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDDDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQMAQRYTRMKEKRADERETRGGGRGGGRG 624
            T + IKSSDVG++IG  G +I+EL+ +SGA I +G+   +   + T VI+ G+ ++VA+AK++IE+ L                    +     S S+      I+W+E+NR +D AQKERW +CP L+KDFY E P V +M  E V + R +  NIVV+   E        P   FE  F  +PDI+  I  Q F+ PSPIQ Q WP LL G DLIGIAQTGTGKTLAFL+P  IHID QPVPR  RGG NVLV++PTRELALQI  EV+KY Y  IK VCVYGGG+R++Q+ +V  G+EIIIATPGRLNDLV AG+I+V+S+TYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWP GVRRLA SYMK+P+ VF+G+LDLAAVHSVTQ I     +E+K  +L +F   ME DDKVI+FVGKK RADDISS+LSL+G+ CQSIHG+R Q DREQAL DLK+GEV+IL+ATDVASRGIDI+D+T++FNYDFPRNIEEYVHRVGRTGRAGKTG +IS++ R DW  A+ELI IL EA QE+P+EL +MA+R+   KEK+A E+E       G RG
Sbjct:  108 TKVMIKSSDVGKVIGKGGSKIRELQGESGAHIQIGKPSDEDFGQTTSVIVSGSGESVAKAKQLIEDFLNNFNSRSNGSSGNISGSGNGVYGTAVSESEPKKPPVINWAEVNRIYDEAQKERWNKCPPLLKDFYIEDPHVASMLPEEVQKLRKEKNNIVVTYVFEEGENAIPNPVRTFEQCFAHYPDILEEIYKQNFEVPSPIQCQAWPILLKGHDLIGIAQTGTGKTLAFLLPALIHIDKQPVPRSQRGGANVLVMAPTRELALQIEKEVKKYSYRNIKCVCVYGGGNRREQVNLVAEGIEIIIATPGRLNDLVMAGIIDVKSVTYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPEGVRRLAQSYMKNPIQVFIGTLDLAAVHSVTQRIEL-IKEEDKSALLREFIDNMEPDDKVIVFVGKKTRADDISSELSLEGIKCQSIHGNREQYDREQALEDLKTGEVRILIATDVASRGIDIEDVTHIFNYDFPRNIEEYVHRVGRTGRAGKTGESISLITREDWAQAKELIAILEEANQEVPEELTKMAERFNVWKEKKAAEKERERMDLRGCRG 688

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. nr
Match: gi|817063493|ref|XP_012253449.1| (probable ATP-dependent RNA helicase DDX43 [Athalia rosae])

HSP 1 Score: 695.271 bits (1793), Expect = 0.000e+0
Identity = 345/569 (60.63%), Postives = 430/569 (75.57%), Query Frame = 0

Query:   60 HGTSLHIKSSDVGRLIGTKGRQIQELRQKSGARIDVGEECSDRKLKFTEVILGGADDTVAEAKRMIEELLGLQDKY---QSASQIDTSVAID-----WSEINRQHDVAQKERWLRCPTLIKDFYEEHPEVNAMGSEVVDQFRADNYNIVVSNFDET--NVTPFMKPCT-----QFEHAFHPFPDIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKYEYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDDDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQMAQRYTRMKEKRADERE 613
            +G  + I SS VG+LIG  G +I+EL+++SGARI+VG+         T V L G+++   +AK +I+ELL  +      Q    +D    +D     W++ N ++   Q ERW +CP LIK+FY E P V  M  + V QFR  N +I+V  F+E   N   F  P        F+ AF  +P+IM  I  QGF  PSPIQ Q WP LLSGKDLIGIAQTGTGKTLAFL+P  IHI+ QP+PR  RGGPNVLV++PTRELALQI  EV KY Y GIK+VC+YGGG RK+Q+ IV+ GVEI+IATPGRLNDLV+AG+++V +ITYLVLDEADRMLDMGFEPQIRK LLDIRPDRQTVMTSATWPPGVRRLA SYMKDP+ V+VGSLDLAAVHSV Q IL  + D EK +ML +FF+ M  DDKVI+FVGKK+R DD++SDL+L+G+ CQSIHG R QCDREQAL D+KSGEV+IL+ATDVASRGIDI+DIT+V+NYDFPR+IEEYVHRVGRTGRAG++G +IS+M RSDW  A+ELI+IL EA Q +P+E+H+MA+RY+  K+++  ++E
Sbjct:   83 NGLEISIDSSKVGKLIGRGGCKIKELQEQSGARINVGKPEDSMS---TPVTLVGSEEAQQKAKELIDELLTEKPPPPPPQQKENVDAEAEMDFTNFDWTKANEEYAKCQLERWAKCPKLIKNFYHEDPVVANMPEDQVAQFRKKNNDIMVCIFEEAAENDEKFSNPAIPNPVQTFDQAFKDYPEIMEEILKQGFATPSPIQCQAWPILLSGKDLIGIAQTGTGKTLAFLLPALIHIEGQPIPRSERGGPNVLVMAPTRELALQIEQEVAKYSYRGIKAVCLYGGGSRKEQVDIVSRGVEIVIATPGRLNDLVQAGIVDVTTITYLVLDEADRMLDMGFEPQIRKTLLDIRPDRQTVMTSATWPPGVRRLAQSYMKDPLQVYVGSLDLAAVHSVMQTILVVD-DSEKSEMLFEFFNNMGPDDKVIVFVGKKSRVDDLASDLALKGISCQSIHGGREQCDREQALEDIKSGEVRILIATDVASRGIDIEDITHVYNYDFPRDIEEYVHRVGRTGRAGRSGESISLMTRSDWSHAKELIRILEEANQAVPEEVHRMAERYSAWKQRKVQDKE 647

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. nr
Match: gi|1339071809|ref|XP_023723111.1| (probable ATP-dependent RNA helicase DDX43 [Cryptotermes secundus] >gi|1330880365|gb|PNF17556.1| putative ATP-dependent RNA helicase DDX43 [Cryptotermes secundus] >gi|1330880366|gb|PNF17557.1| putative ATP-dependent RNA helicase DDX43 [Cryptotermes secundus])

HSP 1 Score: 681.019 bits (1756), Expect = 0.000e+0
Identity = 359/611 (58.76%), Postives = 435/611 (71.19%), Query Frame = 0

Query:   18 STQPHASGGQSARESSQWGEWGRTTDPPPSVGRGRGARRGEVHGTSLHIKSSDVGRLIGTKGRQIQELRQKSGARIDVGEECSDRKLKFTEVILGGADDTVAEAKRMIEELLG------LQDKYQSASQIDTSVA--------IDWSEINRQHDVAQKERWLRCPTLIKDFYEEHPEVNAMGSEVVDQFRADNYNIVVSN-FDETNVTPFMKPCTQFEHAFHPFPDIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKYEYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDDDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQMAQRYTRMKEKRADERE 613
            + Q ++SGG++ RE   +   GR          G G  R EV      IK+ DVG++IG  G +I+EL+ +SGA I VG+ C +   + T VIL G+ D+VA+AK +IE+ L                  +T+V         IDW++ +R  + AQKERW +CP L KDFY E PEV  M  E V +FR  N NIVVS  FDE   +    P   FE  F  +P+I+  I  Q F+ PSPIQ Q WP LL G DLIGIAQTGTGKTLAFL+P  IHID QPVPR  R G NVLV++PTRELALQI  EV KY Y  IK VCVYGGG+R++QM IV  GVEIIIATPGRLNDLV AG+I+V SITYLVLDEADRMLDMGFEPQIRK+LLDIRPDRQT+MTSATWP GVRRLA SYMK+P+ VF+G+LDLAAVHSVTQ I     D +K  +L +F   M+ DDKVI+FVGKK RADD+SS+LSL G+ CQSIHGDR Q DREQAL DLKSG V IL+ATDVASRGIDI+D+T++FNYDFPRNIEEYVHRVGRTGRAG+TG +I+++ R DW  A+ELI IL EA QE+P++L +MA+R+   KEK+A E++
Sbjct:   80 NCQEYSSGGRNDRE---YNSGGRND-------CGMGCDRTEVL-----IKACDVGKIIGKGGTKIRELQNESGAHIQVGKPCDEDFGQTTSVILSGSVDSVAKAKHLIEDFLNNFSSKSDGSSCSGTGGTETAVVEPEPQKPQIDWAKASRIFEEAQKERWSKCPPLHKDFYIEDPEVANMLPEEVQRFRKANNNIVVSYVFDEVE-SGIPNPVQTFEQCFAHYPEILEEIYKQNFEVPSPIQCQAWPVLLKGHDLIGIAQTGTGKTLAFLLPALIHIDMQPVPRSERRGANVLVMAPTRELALQIEKEVNKYNYKNIKCVCVYGGGNRREQMNIVAEGVEIIIATPGRLNDLVLAGIIDVTSITYLVLDEADRMLDMGFEPQIRKVLLDIRPDRQTIMTSATWPEGVRRLAQSYMKNPIQVFIGTLDLAAVHSVTQTIEIVEED-DKYPLLDEFIRNMDPDDKVIVFVGKKIRADDLSSNLSLAGITCQSIHGDREQYDREQALEDLKSGTVHILIATDVASRGIDIEDVTHIFNYDFPRNIEEYVHRVGRTGRAGRTGESITLLTRQDWAQAKELITILEEANQEVPEQLIKMAERFHAWKEKKAAEKD 673

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. nr
Match: gi|1059878165|ref|XP_017794333.1| (PREDICTED: probable ATP-dependent RNA helicase DDX43 [Habropoda laboriosa] >gi|915658210|gb|KOC61391.1| putative ATP-dependent RNA helicase DDX43 [Habropoda laboriosa])

HSP 1 Score: 680.248 bits (1754), Expect = 0.000e+0
Identity = 348/617 (56.40%), Postives = 426/617 (69.04%), Query Frame = 0

Query:   22 HASGGQSARESSQWGEWGR--TTDPPPSVGRGRGARRGEVHGTSLHIKSSDVGRLIGTKGRQIQELRQKSGARIDVGEECSDRKLKFTEVILGGADDTVAEAKRMIEELLG-----------LQDKYQSASQIDTSVAIDWSEINRQHDVAQKERWLRCPTLIKDFYEEHPEVNAMGSEVVDQFRADNYNIVVSN-FDE----TNVTPFMKPCTQFEHAFHPFPDIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKYEYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDDDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQMAQRYTRMKEKRADERETRGGGRG 620
             + G QS  +S+  G++ R  T                E     +HI +  VGRLIG  G  I++L+ K+  +I +     +     T V + G+ +   +AK +IEE L             Q +     QID  VA DWS+ N++ D  +KE+W +C  +IK+FY+EHP V  M  E V   R  N NI V   FDE    T  +    P   FE AF  FP+I+  IR Q F +PSPIQ Q WP LLSG+DLIGIAQTGTGKTLAFL+P  IHI+ QP+PR  R GPNVLV++PTRELALQI  EV KY YHG K+VC+YGGG RK+Q+ +VT GVEI+IATPGRLNDLVE+ ++N+ SITYLVLDEADRMLDMGFEPQIRK LLDIRPDRQTVMTSATWP GVRRLA SYMK+P+ VFVGSLDLA VH+V Q I +   + EK DM+  FF +M   DKV++F GKK+R DDI+SDL+LQGV CQSIHG R QCDREQAL DLK+GEV+IL+ATDVASRGIDI+DIT+V NYDFPR+IEEYVHRVGRTGRAG+TG +I+ M R DW  A+ELI IL EA QE+P+E++ MA RY   KEKRA+E++     RG
Sbjct:    5 QSYGRQSYSKSNDRGKYRRSNTFRNADQYSNSHNNFNNEFEKLIIHISTDKVGRLIGRSGSNIRDLQDKTSTKIHIDRSSGNDT---TAVTIIGSKEGQQQAKSLIEESLNDFSYPSQRLENEQKEQDDKPQIDF-VAFDWSQANKKCDEFRKEKWSKCVPVIKNFYKEHPAVANMTKEQVANIRKTNNNIEVKYMFDEQGNDTEQSSIPNPIETFEQAFEIFPEILEEIRKQRFTKPSPIQCQAWPILLSGQDLIGIAQTGTGKTLAFLLPALIHIEGQPIPRSERNGPNVLVMAPTRELALQIEKEVNKYSYHGFKAVCLYGGGSRKEQVNVVTKGVEIVIATPGRLNDLVESNILNLNSITYLVLDEADRMLDMGFEPQIRKTLLDIRPDRQTVMTSATWPQGVRRLAQSYMKNPIQVFVGSLDLATVHTVLQKI-YIIEETEKTDMMYQFFREMAPTDKVMVFFGKKSRVDDIASDLALQGVNCQSIHGGREQCDREQALEDLKTGEVQILLATDVASRGIDIEDITHVLNYDFPRDIEEYVHRVGRTGRAGRTGESITFMTRRDWSHAKELINILEEANQEVPEEVYNMADRYETWKEKRANEKQLGRSDRG 616

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. nr
Match: gi|936603654|ref|XP_014215635.1| (probable ATP-dependent RNA helicase DDX43 [Copidosoma floridanum])

HSP 1 Score: 676.781 bits (1745), Expect = 0.000e+0
Identity = 343/604 (56.79%), Postives = 425/604 (70.36%), Query Frame = 0

Query:   24 SGGQSARESSQWGEWGRTTDPPPSVGRGRGARRGEVHGTSLHIKSSDVGRLIGTKGRQIQELRQKSGARIDVGEECSDRKLKFTEVILGGADDTVAEAKRMIEELLGLQ----------------DKYQSASQIDTSVA---IDWSEINRQHDVAQKERWLRCPTLIKDFYEEHPEVNAMGSEVVDQFRADNYNIVVSNFDETNVTP---FMKPCTQFEHAFHPFPDIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKYEYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDDDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQMAQRYTRMK 605
            + GQ  R + Q  +  R +       R R         T+ ++++S +GRLIG  G QI+EL+++S  +I+V +EC         V+  G+ D   + K MIEELL ++                  Y      +T+     IDWS   +  +   +++W   P + K+FY E PEV  M  E VD+ R +N NI V    ET+         P   FE AF  +PDIM  I+ QGF++PSPIQ Q WP LLSGKD+IGIAQTGTGKTLAFL+P  IHIDNQ  PR  R GP VLV++PTRELALQI  EV KY+YHGIK+VC+YGGG RK Q+KI++ GVEI+IATPGRLNDLV++ +++V+ ++YLVLDEADRMLDMGFEPQIRK LLD+RPDRQ+VMTSATWPPGVRRLA+SYMK+PVTV VGSLDL AVHSVTQ IL  N +EEK DML DFF  M  DDK IIF GKKA+ DD+ SDL+L GV CQSIHG R QCDREQAL D+KSG+V+IL+ATDVASRGIDI+DIT+VFNYDFPR+IEEYVHRVGRTGRAG+TG +IS++ R DW  A++LIKIL EA+QEIP EL+ MA+RY + K
Sbjct:   33 NNGQRNRNTHQNAQENRDS------SRNRDKNNSNEEQTTFYVETSKLGRLIGRGGSQIKELQEESRTKINVNKECIRGSKTLITVV--GSKDAQCQVKSMIEELLDIKLIEPNEGETGNGGYSNSGYNEGDDSNTASVTGDIDWSTAAKDCEAYLEKKWAAYPAVKKNFYIEDPEVTNMTKEEVDKIRQENNNINVEYTFETDDKTDDDIPNPVQTFEQAFKNYPDIMMEIKKQGFEKPSPIQCQAWPVLLSGKDMIGIAQTGTGKTLAFLLPALIHIDNQDTPRSERCGPTVLVMAPTRELALQIQKEVNKYDYHGIKAVCLYGGGSRKDQVKILSGGVEIVIATPGRLNDLVQSEILDVKCVSYLVLDEADRMLDMGFEPQIRKTLLDVRPDRQSVMTSATWPPGVRRLATSYMKNPVTVCVGSLDLKAVHSVTQKILIVN-EEEKTDMLKDFFQNMAPDDKAIIFFGKKAKVDDLGSDLALSGVKCQSIHGGREQCDREQALEDIKSGDVRILLATDVASRGIDIEDITHVFNYDFPRDIEEYVHRVGRTGRAGRTGESISLVTRRDWSLAKDLIKILEEAEQEIPTELYDMAERYEKKK 627

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. nr
Match: gi|1070601855|ref|XP_018398358.1| (PREDICTED: probable ATP-dependent RNA helicase DDX43 [Cyphomyrmex costatus] >gi|1009376571|gb|KYM99994.1| putative ATP-dependent RNA helicase DDX43 [Cyphomyrmex costatus])

HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0
Identity = 340/577 (58.93%), Postives = 415/577 (71.92%), Query Frame = 0

Query:   59 VHGTSLHIKSSDVGRLIGTKGRQIQELRQKSGARIDVGEECSDRKLKFTEVILGGADDTVAEAKRMIEELLGLQ---------DKYQSASQIDTS----------VAIDWSEINRQHDVAQKERWLRCPTLIKDFYEEHPEVNAMGSEVVDQFRADNYNIVVSNF--DETNVTPFMK---PCTQFEHAFHPFPDIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKYEYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDDDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQMAQRYTRMKEKRADE 611
             +G  ++I S++VGRLIG  G +I+ L+++SGA I + ++ ++     T V L G DDT   AK +IEEL   +         +KY++ S   T+             DW + N +++  QK+RW   P +IKDFY+E P +  M   VV  FR  N NI V +   +E      MK   P   FE AFH FPDI+  IR Q F++PSPIQ Q WP LLSG+DLIGIAQTGTGKTLAFL+P  IHID Q  PR  R GPNVLV++PTRELALQI  EV KY YHGIK+VCVYGGG+RK Q+  VT GV+I+IATPGRLNDLV+A V++V ++TYL+LDEADRMLDMGFEPQIRK LL +RPDRQTVMTSATWP GVRRLA SYMK+P+ VFVGSLDLAAVHSVTQ I   N D EK DM+  FF +M   DKVIIF GKK++ DDISSDL+L  V CQSIHGDR Q DREQAL DLK+G V+IL+ATDVASRGIDI+DIT+V NYDFPR+IEEYVHRVGRTGRAG+TG +I+ M R DW  A+ LI IL EA QE+P+E+++MA+RY   K+K+  E
Sbjct:   72 TNGLVMYIDSNNVGRLIGRGGSKIKALQEESGAMIKIDKQYNENGQ--TAVTLTGTDDTQQRAKSLIEELFTERGNTHLNERSNKYENESAQQTTSQPEKQEIDWTTFDWGKANEEYEERQKQRWAALPPIIKDFYKEDPTIANMSKSVVANFRKTNNNIEVRHVFENEGGSNENMKIPNPVQTFEQAFHAFPDILREIRKQNFEKPSPIQCQAWPILLSGQDLIGIAQTGTGKTLAFLLPALIHIDGQITPREERSGPNVLVMAPTRELALQIEKEVGKYSYHGIKAVCVYGGGNRKAQIDTVTKGVQIVIATPGRLNDLVQANVLDVSAVTYLILDEADRMLDMGFEPQIRKTLLGVRPDRQTVMTSATWPQGVRRLAQSYMKNPIQVFVGSLDLAAVHSVTQRIYMINED-EKTDMMHQFFQEMGPHDKVIIFFGKKSKVDDISSDLALMNVDCQSIHGDRDQVDREQALEDLKTGAVQILLATDVASRGIDIEDITHVLNYDFPRDIEEYVHRVGRTGRAGRTGESITFMTRHDWHHAKALIDILEEANQEVPEEVYKMAERYDAWKKKKEQE 645

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. nr
Match: gi|1061134681|ref|XP_017891423.1| (PREDICTED: probable ATP-dependent RNA helicase DDX43 [Ceratina calcarata])

HSP 1 Score: 669.848 bits (1727), Expect = 0.000e+0
Identity = 333/567 (58.73%), Postives = 415/567 (73.19%), Query Frame = 0

Query:   64 LHIKSSDVGRLIGTKGRQIQELRQKSGARIDVGEECSDRKLKFTEVILGGADDTVAEAKRMIEELLGLQDKYQS-----------ASQIDTSVAIDWSEINRQHDVAQKERWLRCPTLIKDFYEEHPEVNAMGSEVVDQFRADNYNIVVSN-FDE-TNVTPFMK---PCTQFEHAFHPFPDIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKYEYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDDDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQMAQRYTRMKEKRADERET 614
            + I +  VG+LIG  G  I++L+ K+G +I +     +     T+VI+ G+ +    AK +IEE L     YQS             +ID +   DW+  +++ D  QKERW +C  ++K+FY+EHP V  M  + V   R  N NI V   FDE  +V+  ++   P   FE AF  +P+I+  I+ QGF +PSPIQ Q WP LLSGKDLIGIAQTGTGKTLAFL+P  IHI+ Q +PR  R GPNVLV++PTRELALQI  EV KY YHGIKSVC+YGGG+RK+Q+ +VT GVEI+IATPGRLNDLVEA ++N+ +ITYLVLDEADRMLDMGFEPQIRK L+DIRPDRQTVMTSATWP GVRRLA SYMK+P+ VFVGSLDLA VH+V Q I F   +EEK +M+  FF  M   DKV++F GKK + DD+SSDL+L GV CQSIHG R Q DREQAL DLK+GEV+IL+ATDVASRGIDI+D+T+V NYDFPR+IEEYVHRVGRTGRAG+TG +IS M R DW +A+ELI +L EA QE+P EL+QMA+RY   K+KRA E+++
Sbjct:   50 IQIDTGKVGKLIGKGGSNIKDLQDKTGTKIKIERSNGN---DTTDVIIIGSAEGQERAKNLIEESLNDPPPYQSQRLENDQKECNKPKIDFT-NFDWTAASKKCDEFQKERWSKCTAIVKNFYKEHPSVANMTKKQVAHIRKTNNNIEVKYMFDEKCDVSEQLRIPNPIETFEQAFESYPEILEEIKKQGFAKPSPIQCQAWPILLSGKDLIGIAQTGTGKTLAFLLPALIHIEGQEIPRSERNGPNVLVMAPTRELALQIEREVNKYSYHGIKSVCIYGGGNRKEQINVVTKGVEIVIATPGRLNDLVEANILNISTITYLVLDEADRMLDMGFEPQIRKTLIDIRPDRQTVMTSATWPQGVRRLAQSYMKNPIQVFVGSLDLATVHTVVQKI-FIIDEEEKTNMMYKFFHNMAPTDKVMVFFGKKCKVDDVSSDLALDGVKCQSIHGGREQSDREQALEDLKTGEVQILLATDVASRGIDIEDVTHVLNYDFPRDIEEYVHRVGRTGRAGRTGESISFMTRKDWSNAQELINLLEEANQEVPKELNQMAERYEAWKKKRAAEKQS 611

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. nr
Match: gi|1070158876|ref|XP_018359803.1| (PREDICTED: probable ATP-dependent RNA helicase DDX43 isoform X2 [Trachymyrmex cornetzi] >gi|1009402932|gb|KYN22513.1| putative ATP-dependent RNA helicase DDX43 [Trachymyrmex cornetzi])

HSP 1 Score: 669.078 bits (1725), Expect = 0.000e+0
Identity = 350/649 (53.93%), Postives = 435/649 (67.03%), Query Frame = 0

Query:    6 DDVWDLDEVPSGSTQP----HASGGQSARESSQWG----EWGRTTDPPPSVGRGRGARRGE-----VHGTSLHIKSSDVGRLIGTKGRQIQELRQKSGARIDVGEECSDRKLKFTEVILGGADDTVAEAKRMIEELL--------GLQDKYQS---------------ASQIDTSVAIDWSEINRQHDVAQKERWLRCPTLIKDFYEEHPEVNAMGSEVVDQFRADNYNIVVSNF-------DETNVTPFMKPCTQFEHAFHPFPDIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKYEYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDDDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQMAQRYTRMKEKRADE 611
            DD WD D   S         H  G +  RES  +      +G   D           R+ +      +G  ++I S+++GRLIG  G +I+ L++ SGARI++  + S+     + V L G DD    AK +IE+LL        G+ ++  +                 +ID +   DW++ N +++  QK RW   P +IK+FYEE P +  M   VV QFR  N NI V +        DE    P   P   FE AFH FPDI+  IR Q F++PSPIQ Q WP LLSG+DLIGIAQTGTGKTLAFL+P  IHID Q  PR  R GPNVLV++PTRELALQI  EV KY YHGIK+VCVYGGG+RK Q+  VT GV+I+IATPGRLNDLV+A V++V ++TYL+LDEADRMLDMGFEPQIRK LL +RP+RQTVMTSATWP GVRRLA SYMK+P+ VFVGSLDLAAVHSVTQ I   N D EK DM+  FF +M+  DKVI+F GKK++ DDISSDL+L  + CQSIHGDR Q DREQAL DLK+G V+IL+ATDVASRGIDI+DIT+V NYDFPR+IEEYVHRVGRTGRAG+TG +I+ M R DW  A+ LI IL EA QE+P+E+++MA+RY   K+K+  E
Sbjct:    2 DDNWDSDSKTSSRRYDRGYDHRRGNRRERESQFYRRSNRSFGDNNDSSRQNYNNDSYRKSDEKSDSTNGLVMYIDSNNIGRLIGRGGSKIKALQEDSGARININRQYSENGQ--SAVTLTGTDDAQQRAKSLIEDLLTERGGTERGVTERSNTYENECAQKPTFQPEEKEEIDWA-NFDWNKANEEYEERQKRRWAALPPIIKNFYEEDPAIANMPQSVVTQFRKTNNNIEVRHVFENAGGSDENMKIP--NPVQTFEQAFHAFPDILREIRKQSFEKPSPIQCQAWPILLSGQDLIGIAQTGTGKTLAFLLPALIHIDGQVTPREERSGPNVLVMAPTRELALQIEKEVGKYSYHGIKAVCVYGGGNRKAQIDTVTKGVQIVIATPGRLNDLVQANVLDVSAVTYLILDEADRMLDMGFEPQIRKTLLGVRPNRQTVMTSATWPQGVRRLAQSYMKNPIQVFVGSLDLAAVHSVTQRIYMANED-EKTDMMHQFFQEMDPHDKVIVFFGKKSKVDDISSDLALTNIDCQSIHGDRDQSDREQALEDLKTGAVQILLATDVASRGIDIEDITHVLNYDFPRDIEEYVHRVGRTGRAGRTGESITFMTRQDWHHAKALIDILEEANQEVPEEVYKMAERYDAWKKKKEQE 644

[Close]

BLAST of atp-dependent rna helicase ddx43 vs. nr
Match: gi|817215302|ref|XP_012283801.1| (probable ATP-dependent RNA helicase DDX43 isoform X2 [Orussus abietinus])

HSP 1 Score: 669.078 bits (1725), Expect = 0.000e+0
Identity = 340/579 (58.72%), Postives = 421/579 (72.71%), Query Frame = 0

Query:   49 GRGRGARRGEVHGTSLHIKSSDVGRLIGTKGRQIQELRQKSGARIDVGEECSDRKLKFTEVILGGADDTVAEAKRMIEELLGLQDK-YQS------------ASQIDTSVAIDWSEINRQHDVAQKERWLRCPTLIKDFYEEHPEVNAMGSEVVDQFRADNYNIVVSN-FDETNVTPFMKPCTQFEHAFHPFPDIMATIRHQGFDRPSPIQAQGWPYLLSGKDLIGIAQTGTGKTLAFLMPCFIHIDNQPVPRGSRGGPNVLVLSPTRELALQIAGEVEKYEYHGIKSVCVYGGGDRKQQMKIVTAGVEIIIATPGRLNDLVEAGVINVESITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPPGVRRLASSYMKDPVTVFVGSLDLAAVHSVTQHILFGNSDEEKRDMLMDFFSQMEDDDKVIIFVGKKARADDISSDLSLQGVVCQSIHGDRAQCDREQALMDLKSGEVKILVATDVASRGIDIQDITYVFNYDFPRNIEEYVHRVGRTGRAGKTGTAISIMGRSDWGSAEELIKILTEAQQEIPDELHQMAQRYTRMKEKRADERE 613
             RG   R G   G  +++ SS +G++IG  G +I+EL+ +SGARI++    +      T V L G+ +   +A+ +I ELL   DK YQS               ID S   DW + + Q++   +E+W + P +IK+FY EHP+V  M  E V + R  N +I V + F+         P   FE AFH +P+I++ I+ QGF++PSPIQ+Q WP LLSGKDLIG+AQTGTGKTLAFL+P  IHID Q  PR  R GPNVLV++PTRELALQI  EV KY Y GIK+VC+YGGG RK Q+ +V  GV+I+IATPGRLNDLV+  V++V S+TYLVLDEADRMLDMGFEPQIRK LLD+RPDRQTVMTSATWP GVRRLA SYMKDP+ VFVGSLDLAAVHSVTQ +   + +EEK +ML DFF +ME D+KVI+F GKKAR DD+SS+L+L GV CQSIHG R Q DREQAL D+KSG V+IL+ATDVASRGIDI+DIT+V NYDFPR+IEEYVHRVGRTGRAG+TG +IS M R DW  A+ELI IL EA QE+P EL++MA RY   KE+RA E++
Sbjct:   72 NRGDNQREGRDEGLLMYVDSSKIGKIIGRGGTKIRELQDQSGARINIDRSSNSSS---TGVNLIGSSEAQQKAQTLINELL--DDKPYQSQREESKEVKEKETQDIDFS-NFDWQKASGQYETYMQEKWSKHPPIIKNFYNEHPDVTNMTEEHVAKIRKMNNSIEVHHVFESETELKIPNPIETFEQAFHDYPEILSEIQKQGFEKPSPIQSQAWPILLSGKDLIGVAQTGTGKTLAFLLPALIHIDGQTTPRSDRKGPNVLVMAPTRELALQIEKEVSKYSYRGIKAVCLYGGGSRKDQIDVVGKGVQIVIATPGRLNDLVQTDVLDVTSVTYLVLDEADRMLDMGFEPQIRKTLLDVRPDRQTVMTSATWPQGVRRLAQSYMKDPLQVFVGSLDLAAVHSVTQKVYIID-EEEKTNMLHDFFRRMEPDEKVIVFFGKKARVDDLSSELALTGVNCQSIHGGRDQSDREQALEDIKSGCVRILLATDVASRGIDIEDITHVLNYDFPRDIEEYVHRVGRTGRAGRTGESISFMTRKDWSHAKELISILEEASQEVPQELYRMADRYEGWKERRAQEKD 643

The following BLAST results are available for this feature:

BLAST of atp-dependent rna helicase ddx43 vs. L. salmonis genes
BLAST of atp-dependent rna helicase ddx43 vs. SwissProt
BLAST of atp-dependent rna helicase ddx43 vs. nr

BLAST of atp-dependent rna helicase ddx43 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25


Match Name	E-value	Identity	Description
EMLSAG00000007141	1.482e-59	32.35	supercontig:LSalAtl2s:LSalAtl2s402:374905:376772:1...	[more]
EMLSAG00000000395	2.438e-58	35.39	supercontig:LSalAtl2s:LSalAtl2s1063:103535:105763:...	[more]
EMLSAG00000000249	8.834e-58	33.33	supercontig:LSalAtl2s:LSalAtl2s1036:82728:88820:1 ...	[more]
EMLSAG00000009885	2.652e-57	42.91	supercontig:LSalAtl2s:LSalAtl2s643:195185:200626:1...	[more]
EMLSAG00000000846	1.624e-54	37.06	supercontig:LSalAtl2s:LSalAtl2s1142:195200:196664:...	[more]
EMLSAG00000012967	1.271e-53	32.75	supercontig:LSalAtl2s:LSalAtl2s98:1266421:1269115:...	[more]
EMLSAG00000002659	3.091e-50	34.36	supercontig:LSalAtl2s:LSalAtl2s153:555306:559625:1...	[more]
EMLSAG00000006912	1.501e-49	31.27	supercontig:LSalAtl2s:LSalAtl2s391:287461:291724:1...	[more]
EMLSAG00000005732	4.085e-46	30.94	supercontig:LSalAtl2s:LSalAtl2s309:725565:728317:1...	[more]
EMLSAG00000012740	4.416e-45	26.78	supercontig:LSalAtl2s:LSalAtl2s967:89676:95604:1 g...	[more]

Pages

BLAST of atp-dependent rna helicase ddx43 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|145559466\|sp\|Q9NXZ2.2\|DDX43_HUMAN	0.000e+0	47.41	RecName: Full=Probable ATP-dependent RNA helicase ...	[more]
gi\|143811384\|sp\|Q86TM3.3\|DDX53_HUMAN	4.269e-180	45.49	RecName: Full=Probable ATP-dependent RNA helicase ...	[more]
gi\|442570094\|sp\|Q1DP69.2\|DBP2_COCIM	5.139e-135	49.31	RecName: Full=ATP-dependent RNA helicase DBP2	[more]
gi\|74660243\|sp\|Q6CIV2.1\|DBP2_KLULA	1.205e-134	49.55	RecName: Full=ATP-dependent RNA helicase DBP2	[more]
gi\|134034064\|sp\|A1C6C4.1\|DBP2_ASPCL	5.076e-134	48.42	RecName: Full=ATP-dependent RNA helicase dbp2	[more]
gi\|160380609\|sp\|A7E449.1\|DBP2_SCLS1	8.906e-134	49.66	RecName: Full=ATP-dependent RNA helicase dbp2	[more]
gi\|160380700\|sp\|A6SFW7.2\|DBP2_BOTFB	1.727e-133	49.55	RecName: Full=ATP-dependent RNA helicase dbp2	[more]
gi\|118284\|sp\|P24783.1\|DBP2_YEAST	3.538e-133	48.98	RecName: Full=ATP-dependent RNA helicase DBP2; Alt...	[more]
gi\|160380611\|sp\|A6ZRX0.1\|DBP2_YEAS7	3.983e-133	48.98	RecName: Full=ATP-dependent RNA helicase DBP2; Alt...	[more]
gi\|91206537\|sp\|Q4X195.2\|DBP2_ASPFU	1.875e-132	48.40	RecName: Full=ATP-dependent RNA helicase dbp2	[more]

Pages

BLAST of atp-dependent rna helicase ddx43 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1227965477\|ref\|XP_021914078.1\|	0.000e+0	59.97	probable ATP-dependent RNA helicase DDX43 isoform ...	[more]
gi\|1227965475\|ref\|XP_021914077.1\|	0.000e+0	59.97	probable ATP-dependent RNA helicase DDX43 isoform ...	[more]
gi\|817063493\|ref\|XP_012253449.1\|	0.000e+0	60.63	probable ATP-dependent RNA helicase DDX43 [Athalia...	[more]
gi\|1339071809\|ref\|XP_023723111.1\|	0.000e+0	58.76	probable ATP-dependent RNA helicase DDX43 [Cryptot...	[more]
gi\|1059878165\|ref\|XP_017794333.1\|	0.000e+0	56.40	PREDICTED: probable ATP-dependent RNA helicase DDX...	[more]
gi\|936603654\|ref\|XP_014215635.1\|	0.000e+0	56.79	probable ATP-dependent RNA helicase DDX43 [Copidos...	[more]
gi\|1070601855\|ref\|XP_018398358.1\|	0.000e+0	58.93	PREDICTED: probable ATP-dependent RNA helicase DDX...	[more]
gi\|1061134681\|ref\|XP_017891423.1\|	0.000e+0	58.73	PREDICTED: probable ATP-dependent RNA helicase DDX...	[more]
gi\|1070158876\|ref\|XP_018359803.1\|	0.000e+0	53.93	PREDICTED: probable ATP-dependent RNA helicase DDX...	[more]
gi\|817215302\|ref\|XP_012283801.1\|	0.000e+0	58.72	probable ATP-dependent RNA helicase DDX43 isoform ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold100_size373717	supercontig	scaffold100_size373717:366255..368252 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold100_size373717-processed-gene-2.26-mRNA-1	snap_masked-scaffold100_size373717-processed-gene-2.26-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold100_size373717:366255..368252+

gene from alignment at scaffold100_size373717:366255..368252+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold100_size373717-processed-gene-2.26 ID=snap_masked-scaffold100_size373717-processed-gene-2.26|Name=atp-dependent rna helicase ddx43|organism=Tigriopus kingsejongensis|type=gene|length=1998bp|location=Sequence derived from alignment at scaffold100_size373717:366255..368252+ (Tigriopus kingsejongensis)
ATGGTGCTCAATGACGACGACGTTTGGGACCTCGACGAAGTCCCGTCCGG
ATCCACCCAACCGCACGCCTCCGGCGGTCAATCGGCCCGCGAATCCAGTC
AATGGGGTGAATGGGGCCGCACCACTGACCCACCCCCATCCGTGGGGCGT
GGACGAGGGGCCCGACGTGGGGAAGTCCACGGCACGAGTCTCCACATCAA
GTCCTCGGACGTGGGCCGGCTGATTGGCACCAAAGGACGCCAGATCCAAG
AGCTCCGCCAGAAGAGCGGGGCTCGCATCGACGTCGGCGAAGAATGCTCG
GATCGGAAGCTCAAGTTCACCGAGGTCATCTTGGGCGGTGCCGATGACAC
GGTGGCGGAAGCCAAGCGGATGATCGAAGAACTGCTGGGACTGCAGGACA
AATACCAGTCGGCCTCACAAATTGACACCTCCGTGGCCATCGATTGGAGC
GAAATCAATCGGCAGCACGATGTGGCCCAAAAAGAGCGCTGGCTTCGATG
TCCCACGCTCATCAAGGATTTTTACGAAGAGCATCCCGAGGTCAACGCCA
TGGGGTCGGAGGTGGTGGATCAGTTTCGAGCTGACAACTATAATATCGTG
GTGTCCAACTTTGACGAGACCAACGTTACGCCCTTCATGAAACCGTGCAC
CCAGTTCGAGCACGCCTTCCATCCCTTCCCGGACATCATGGCCACCATCC
GGCATCAAGGGTTCGATCGGCCCTCGCCCATCCAAGCCCAGGGCTGGCCC
TACTTGCTCTCGGGCAAAGATCTCATCGGCATCGCCCAGACGGGAACGGG
CAAGACCTTGGCCTTCCTCATGCCCTGTTTCATCCACATTGACAATCAGC
CCGTGCCTCGCGGTTCACGCGGAGGACCCAATGTTCTCGTCTTGTCGCCC
ACCCGCGAGTTGGCGCTTCAAATCGCCGGCGAAGTGGAGAAGTATGAATA
TCACGGCATCAAGTCGGTCTGCGTGTATGGCGGCGGCGATCGCAAGCAAC
AGATGAAGATCGTGACTGCGGGCGTCGAAATCATCATCGCCACGCCCGGG
CGGCTCAACGACTTGGTCGAAGCGGGTGTCATCAACGTCGAATCCATTAC
CTACCTGGTCCTAGACGAAGCCGATCGCATGCTCGACATGGGCTTCGAGC
CCCAGATCCGCAAGATTCTTTTGGACATTCGTCCCGATCGGCAAACGGTT
ATGACCAGCGCTACTTGGCCGCCTGGCGTCCGACGTCTGGCCTCTTCCTA
CATGAAAGACCCTGTGACGGTCTTTGTGGGCTCACTGGACTTGGCGGCCG
TCCATTCCGTGACTCAGCACATTCTCTTTGGCAACTCCGACGAGGAGAAA
AGGGATATGCTCATGGATTTCTTCAGCCAGATGGAAGACGACGATAAAGT
CATCATTTTTGTGGGCAAGAAGGCCCGGGCCGATGACATCAGCTCAGATC
TAAGCCTTCAGGGTGTGGTATGTCAAAGTATTCACGGCGATCGGGCCCAA
TGCGACCGAGAGCAAGCCTTAATGGATCTCAAGTCGGGGGAAGTGAAAAT
TCTGGTGGCCACCGACGTGGCCTCTCGAGGCATCGACATCCAAGATATCA
CTTATGTGTTTAACTACGATTTCCCTCGCAACATCGAAGAGTATGTGCAC
CGAGTGGGCCGCACGGGTCGAGCCGGAAAAACGGGCACTGCCATCTCGAT
CATGGGCCGTTCCGACTGGGGATCGGCCGAAGAGCTCATTAAGATTCTCA
CCGAAGCTCAGCAAGAGATCCCCGACGAGCTCCATCAGATGGCTCAAAGA
TATACGCGAATGAAAGAGAAGCGAGCCGATGAGAGGGAGACCAGGGGAGG
TGGCCGAGGAGGTGGCCGAGGAGGTGGCCGAGGTGGAGGGGGTGGATCCG
GATGCTTTCGGTGCGGGGAAGAAGGGCACTTTTCCCGCGACTGTCCCCAA
GGTGGTGACAATCGCCGTGGTGGTGGAAGAGGCCGCCCCAGATGGTAA

Synonyms

The feature 'atp-dependent rna helicase ddx43' has the following synonyms


Synonym
Tk05134

Add to Basket

Pages

Pages

Pages

Search form