28s ribosomal protein mitochondrial, snap_masked-scaffold100_size373717-processed-gene-2.36 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|1325293703|ref|XP_023330325.1| (uncharacterized protein LOC111702785 [Eurytemora affinis]) HSP 1 Score: 134.42 bits (337), Expect = 8.309e-35 Identity = 71/162 (43.83%), Postives = 105/162 (64.81%), Query Frame = 0 Query: 1 MP-YKYIGSKSLYEGRPLFKILCHLKDFGQNRIVYRTFDYYKYPGEIHFYRILKAQPEMDEKTLQGRVLVEKVFRGYRYQEPCNVSEEVYKPDFRLVPKREEAQFCQWDKVVDYDIQKHAPYKPEFIDMPPLLKEVIRRNKLARGESVSED-FRLPAYKIYQ 160 MP YKY G+ + Y G+PLF IL +LK+FG+ RI+ R + P FYR+L AQP MD K+ +GRV+VEKV G +Y +P ++S PDF L+P+ +E +FC+W ++ +Y +K +P++ MPPLL+ ++ R RGE +SED F LP +K +Q Sbjct: 1 MPIYKYFGAAAKYHGKPLFHILSNLKEFGKGRIISRAGFKDEKPS---FYRVLFAQPLMDSKSEEGRVIVEKVRNGVKYTKPVDLSNIAPLPDFILIPRTQEEEFCKWSELREYSPEKDIVVEPKYYTMPPLLRLLMEREMSKRGEDLSEDKFLLPHFKTFQ 159
BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|1022772998|gb|KZS17110.1| (Mitochondrial ribosomal protein S34 [Daphnia magna]) HSP 1 Score: 108.612 bits (270), Expect = 1.094e-25 Identity = 62/138 (44.93%), Postives = 95/138 (68.84%), Query Frame = 0 Query: 1 MPYKYIGSKSLYEGRPLFKILCHLKDFGQNRIVYRTFDYYKYPGEIHFYRILKAQPEMDEKTLQGRVLVEKVFRGYRYQEPCNVSEEVYKPDFRLVPKREEAQFCQWDKVVDYDIQKHAPYKPEFIDMPPLLKEVIRR 138 MPY YIG ++ Y G+ L++I+ +LK+FG+ R++ R+ + +YP E+ + +I++A+P MDE+ L GRVLVEKVFRG Y E ++S+ YK DF+LVP R+E +F + +++K PEFI PPLLKE+I + Sbjct: 1 MPYVYIGKRNFYFGKRLWEIVGNLKNFGEGRLLVRS-KFERYP-EVSYVKIIRAEPLMDEENLFGRVLVEKVFRGRHYGE-YDLSKTAYKNDFKLVP-RDEEEFYLSRTMKAEELEKLKKSLPEFIQFPPLLKEMISK 134
BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|1133442574|ref|XP_019877752.1| (PREDICTED: uncharacterized protein LOC109605603 [Aethina tumida]) HSP 1 Score: 105.145 bits (261), Expect = 3.301e-24 Identity = 66/200 (33.00%), Postives = 110/200 (55.00%), Query Frame = 0 Query: 1 MPYKYIGSKSLYEGRPLFKILCHLKDFGQNRIVYRTFDYYKYPGEIHFYRILKAQ-------PEMDEKTLQGRVLVEKVFRGYRYQEPCNVSEEVYKPDFRLVPKREEAQFCQWDKVVDYDIQKHAPYKPEFIDMPPLLKEVIRRNKLARGESVSEDFRLPAYKIYQGDHNITKGEVESNLLSEHISAEYATHKDFDPAL 193 MPYKYIG G+ L++I+ +LK+FG RIV R+ + +YP E + +I+K + P +D T + +V VEKVFRG ++ +P + YKPD++L+PK +E +C+ +V D K A P+ +++PP+L E+I+R+ LA+GE ++E + A +Y N + + + +S P L Sbjct: 1 MPYKYIGRTHDLVGKSLWEIVGNLKNFGVGRIVTRS-RFERYP-EPTYMKIIKVETLPNPEKPSLDN-TRKVKVWVEKVFRGVKHPKPVLIESASYKPDYKLIPKDQEESYCRLSEVKD----KSAKILPKTLELPPILAELIKRDILAKGEKITEQPTIEA--VYNKSMNNSNYRIAKDGEKPTVSIPVGLGTPVSPGL 191
BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|817074445|ref|XP_012259413.1| (28S ribosomal protein S34, mitochondrial [Athalia rosae]) HSP 1 Score: 101.293 bits (251), Expect = 1.091e-22 Identity = 56/180 (31.11%), Postives = 105/180 (58.33%), Query Frame = 0 Query: 1 MPYKYIGSKSLYEGRPLFKILCHLKDFGQNRIVYRTFDYYKYPGEIHFYRILKAQPEMDEKTLQGRVLVEKVFRGYRYQEPCNVSEEVYKPDFRLVPKREEAQFCQWDKVVDYDIQKHAPYKPEFIDMPPLLKEVIRRNKLARGESVSEDFRLP-AYKIYQGDHNITKGEVESNLLSEHI 179 MP KYIG + ++G+ L++IL +LK+ G RI+ R+ + +YP E + +ILK + ++ + +V+ E+ FRG +Y++P + YK D++L+PK EE +C+ +K Q+ P P D PPL K+++ + +G ++E+ +L +K+YQ ++ E E+ ++ H+ Sbjct: 1 MPVKYIGRTTNFKGKSLWEILGNLKNHGVGRIIARSM-FERYP-EPSYIKILKVEALPNDDKRKVKVIAERTFRGVKYEKPITIMSVSYKTDYKLIPKDEETTYCEVEK------QREMPILPRTTDFPPLYKKMLLQTLDQKGTPITEEPKLQLCFKVYQTNYYKVAEEGETPTVTHHL 172
BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|1227974695|ref|XP_021918815.1| (28S ribosomal protein S34, mitochondrial [Zootermopsis nevadensis] >gi|646717014|gb|KDR20025.1| 28S ribosomal protein S34, mitochondrial [Zootermopsis nevadensis]) HSP 1 Score: 98.9821 bits (245), Expect = 8.565e-22 Identity = 57/151 (37.75%), Postives = 89/151 (58.94%), Query Frame = 0 Query: 1 MPYKYIGSKSLYEGRPLFKILCHLKDFGQNRIVYR-TFDYYKYPGEIHFYRILKAQPEMDEKTLQGRVLVEKVFRGYRYQEPCNVSEEVYKPDFRLVPKREEAQFCQWDKVVDYDIQKHAPYKPEFIDMPPLLKEVIRRNKLARGESVSED 150 MP KY+G + ++G+ L++I+ +LK+FG RIV R TF+ Y P + +I K Q +E + R+L EKVFRG +Y + V YK D+RL+PK EE +C+ D V + + P I PPLL+E+I ++ A+G V+++ Sbjct: 1 MPIKYVGRTTSFKGKTLWEIVGNLKNFGVGRIVVRSTFERYPEP---SYLKICKVQALANEDPRKVRILAEKVFRGRKYPKIVEVCSTSYKADYRLLPKDEEQAYCKTDSQV---VLEKVRILPRTIPFPPLLREMILADRRAKGGDVTKE 145
BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|307191187|gb|EFN74884.1| (28S ribosomal protein S34, mitochondrial [Camponotus floridanus]) HSP 1 Score: 97.8265 bits (242), Expect = 2.361e-21 Identity = 61/160 (38.12%), Postives = 92/160 (57.50%), Query Frame = 0 Query: 1 MPYKYIGSKSLYEGRPLFKILCHLKDFGQNRIVYRTFDYYKYPGEIHFYRILKA-------QPEMDEKTLQGRVLVEKVFRGYRYQEPCNVSEEVYKPDFRLVPKREEAQFCQWDKVVDYDIQKHAPYKPEFIDMPPLLKEVIRRNKLARGESVSEDFRL 153 MP K+IG + ++G+PL++IL +LKDFG R+V R + +YP E + +ILK +P D K + VLVE+VFRG + +P + YK D+ LVPK +E + + +K + I P D+PPLL ++I R ARG+ VSE+ +L Sbjct: 1 MPIKFIGRTTDFKGKPLWEILGNLKDFGVGRLVIRN-RFQRYP-EPCYMKILKVAAMPPPDKPHTDRKVI---VLVERVFRGLKSPKPVQMDSATYKADYMLVPKDQEHLYLENNKSPEEKIL------PRTTDLPPLLSQIIARQMKARGDKVSEEPKL 149
BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|91095101|ref|XP_968495.1| (PREDICTED: uncharacterized protein LOC656902 [Tribolium castaneum] >gi|1004402342|gb|KYB28924.1| 28S ribosomal protein S34, mitochondrial-like Protein [Tribolium castaneum]) HSP 1 Score: 97.4413 bits (241), Expect = 2.802e-21 Identity = 59/160 (36.88%), Postives = 94/160 (58.75%), Query Frame = 0 Query: 1 MPYKYIGSKSLYEGRPLFKILCHLKDFGQNRIVYRTFDYYKYPGEIHFYRILKAQP-------EMDEKTLQGRVLVEKVFRGYRYQEPCNVSEEVYKPDFRLVPKREEAQFCQWDKVVDYDIQKHAPYKPEFIDMPPLLKEVIRRNKLARGESVSEDFRL 153 MPYKYIG + Y+G+ L++I+ +LK+FG R+V R+ + +YP E F++ILK +P MD++ + RVLVEK FRG Y +P + YK D++L+PK EE ++ + ++ ++ PPL+K+V+ R A+GE V D +L Sbjct: 1 MPYKYIGRTTNYKGKTLWEIIGNLKNFGVGRLVIRS-TFERYP-ETSFFKILKVEPLACPEVQTMDDQR-KVRVLVEKTFRGITYPKPITIESTSYKADYQLIPKDEEHKYTS-----KVEAKRDIKILQRTMEFPPLMKDVLMRENKAKGEDV-HDLKL 151
BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|1080064335|ref|XP_018574294.1| (uncharacterized protein LOC108913255 [Anoplophora glabripennis]) HSP 1 Score: 95.9005 bits (237), Expect = 1.167e-20 Identity = 55/159 (34.59%), Postives = 93/159 (58.49%), Query Frame = 0 Query: 1 MPYKYIGSKSLYEGRPLFKILCHLKDFGQNRIVYRTFDYYKYPGEIHFYRILKAQPEMDEKTL------QGRVLVEKVFRGYRYQEPCNVSEEVYKPDFRLVPKREEAQFCQWDKVVDYDIQKHAPYKPEFIDMPPLLKEVIRRNKLARGESVSEDFRL 153 MPYKYIG + ++G+ L++I+ +LK+FG RI+ R Y +YP E +++ILK + + +T+ + RV VEK FRG + P + YK D+RL+PK EE +FC+ ++ P++ + PP++KE+I R+ A G +++ +L Sbjct: 1 MPYKYIGRTTDFKGKTLWEIVGNLKNFGIGRIITRGM-YERYP-EPSYFKILKVETLPNPETVSFDNVRKVRVWVEKTFRGKVFPSPIIMESATYKADYRLIPKDEEEKFCK------TVVKDETKIFPKYFEFPPVMKELILRDMKAEGSDATDELKL 151
BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|1339040108|ref|XP_023705502.1| (28S ribosomal protein S34, mitochondrial [Cryptotermes secundus]) HSP 1 Score: 95.5153 bits (236), Expect = 1.560e-20 Identity = 57/155 (36.77%), Postives = 91/155 (58.71%), Query Frame = 0 Query: 1 MPYKYIGSKSLYEGRPLFKILCHLKDFGQNRIVYRTFDYYKYPGEIHFYRILKAQPEMDEKTLQGRVLVEKVFRGYRYQEPCNVSEEVYKPDFRLVPKREEAQFCQWDKVVDYDIQKHAPYK-----PEFIDMPPLLKEVIRRNKLARGESVSED 150 MP KYIG + ++G+ L++I+ +LK+FG RIV R+ + +YP E + +I K + +E + RV EKVFRG +Y + V YK D+RL+PK EE ++C+ Q H P + P + PPLL+E+I ++ A+GE V+++ Sbjct: 1 MPIKYIGRTTSFKGKTLWEIVGNLKNFGVGRIVVRSV-FERYP-EPSYLKICKVEGLANEDPRKVRVWAEKVFRGRKYPKIVEVCSVSYKADYRLIPKDEEEEYCK--------TQSHLPLEKVKILPRTVPFPPLLRELILADRRAKGEDVTKE 145
BLAST of 28s ribosomal protein mitochondrial vs. nr
Match: gi|1000736838|ref|XP_015590914.1| (PREDICTED: 28S ribosomal protein S34, mitochondrial [Cephus cinctus]) HSP 1 Score: 94.3597 bits (233), Expect = 4.630e-20 Identity = 66/176 (37.50%), Postives = 95/176 (53.98%), Query Frame = 0 Query: 1 MPYKYIGSKSLYEGRPLFKILCHLKDFGQNRIVYRTFDYYKYPGEIHFYRILK--AQPEMDEKTLQGR---VLVEKVFRGYRYQEPCNVSEEVYKPDFRLVPKREEAQFCQWDKVVDYDIQKHAPYKPEFIDMPPLLKEVIRRNKLARGESVSEDFRLPAYKIYQGDHNITKGEVE 171 MP KYIG K+ ++G+ L++IL +LKDFG RI+ R + KYP E + +I+K A P L R LV+K FRG + + YK D+ L+PK EE ++CQ K + I P +D PPLLKE++ R+ A G V+E+ RL Q +NIT ++ Sbjct: 1 MPIKYIGRKTDFKGKTLWEILGNLKDFGVGRIIVRN-RFQKYP-EPTYIKIVKVAALPNASGAHLDFRKVAALVQKTFRGITDKNLVQIDRSSYKADYILIPKDEEYKYCQPPKETNPVIL------PRTVDFPPLLKELVLRDMKAAGTPVTEEPRL------QLHYNITNSNIK 162 The following BLAST results are available for this feature:
BLAST of 28s ribosomal protein mitochondrial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 0
BLAST of 28s ribosomal protein mitochondrial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of 28s ribosomal protein mitochondrial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold100_size373717:355991..356740- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold100_size373717-processed-gene-2.36 ID=snap_masked-scaffold100_size373717-processed-gene-2.36|Name=28s ribosomal protein mitochondrial|organism=Tigriopus kingsejongensis|type=gene|length=750bp|location=Sequence derived from alignment at scaffold100_size373717:355991..356740- (Tigriopus kingsejongensis)back to top Synonyms
The feature '28s ribosomal protein mitochondrial' has the following synonyms
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