rho-related gtp-binding protein, snap_masked-scaffold1063_size65393-processed-gene-0.9 (gene) Tigriopus kingsejongensis

Overview


Name	rho-related gtp-binding protein
Unique Name	snap_masked-scaffold1063_size65393-processed-gene-0.9
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000009627 (supercontig:LSalAtl2s:LSalAtl2s619:14755:19285:-1 gene:EMLSAG00000009627 transcript:EMLSAT00000009627 description:"snap_masked-LSalAtl2s619-processed-gene-0.6")

HSP 1 Score: 83.1889 bits (204), Expect = 1.829e-18
Identity = 68/215 (31.63%), Postives = 102/215 (47.44%), Query Frame = 0

Query:   35 PPLRKIKCVLLGDGAVGKTSLIIS------YTTNGYPQEYVPT--AIDTY--------DAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRE--NATTMAELARQKAAPVSEAAAQKL---------AGHIGFERYLESSALTQKNLKEVFDAAILAGLGGQRRQ 222
            P    +KCVL+GD AVGKT L  +       + +     +VPT  AID Y        ++ + +DG  V+L + DT G    D  R  AY  +DV L+CF +   SS  N RE W  ++++        PVIL+G ++D+R   +        ++++  V +   + L         A  +G   Y E+S LT   L EVF+ AI A L  +R Q
Sbjct:    6 PHQELVKCVLVGDNAVGKTRLXCARACKQKVSLSQLLNTHVPTVWAIDQYRIYKDVLENSWMVLDGVNVSLRLWDTFGDHHKD--RRFAYGRSDVVLMCFDIGRVSSLENCREMWYQQIRKFCPN---TPVILVGCKNDVRFILHDEQYINYCKERSPLVRQVRERDLVFPEQGRAVANELGIP-YYETSVLTYYGLNEVFENAIRAALCAKRAQ 214

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BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000004714 (supercontig:LSalAtl2s:LSalAtl2s248:219542:223971:-1 gene:EMLSAG00000004714 transcript:EMLSAT00000004714 description:"maker-LSalAtl2s248-augustus-gene-2.18")

HSP 1 Score: 73.9442 bits (180), Expect = 1.438e-16
Identity = 48/175 (27.43%), Postives = 86/175 (49.14%), Query Frame = 0

Query:   38 RKIKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFDAAI 212
            R  + V LGDG VGK++L + Y  + +   + PT  D Y     +D EP  L++ DT GQ++F T+R       + F+LC+S+    S++  +E +   + R   +  + P+IL+  + DL           ++K +P        LA   G   ++E+SA  ++ + +VF   +
Sbjct:    8 RXYRIVXLGDGGVGKSALTLQYVQHNFIDYHDPTIEDAYQQRTVIDNEPCVLDILDTAGQEEFTTMREQYMRGGEGFVLCYSISDRHSYLEAQE-YRKLILRVRDEDSV-PMILVANKVDLE-------VYGKRKVSP---EEGNALADKFGCP-FIETSAAQRRRIDDVFHTLV 169

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BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000001458 (supercontig:LSalAtl2s:LSalAtl2s1248:131241:136261:1 gene:EMLSAG00000001458 transcript:EMLSAT00000001458 description:"maker-LSalAtl2s1248-augustus-gene-0.13")

HSP 1 Score: 68.5514 bits (166), Expect = 1.942e-14
Identity = 42/149 (28.19%), Postives = 75/149 (50.34%), Query Frame = 0

Query:   40 IKCVLLGDGAVGKTSLIISYTTNGYPQEYVPT-AIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRE----NATTMAELARQKAAPVSEAAAQK 183
             K +L+GD  VGK+ L++ +  + Y + Y+ T  +D     + +DG+ + L++ DT GQ+ F T+    Y      ++ + V    SF N+++ W+ E+ R   +      +L+G + DL      + TT  E A Q   P  EA+A+ 
Sbjct:    9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQ-WLQEIDRYACENVNK--LLVGNKCDLTTKKVVDYTTAKEYADQLNMPFLEASAKN 154

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BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000002040 (supercontig:LSalAtl2s:LSalAtl2s136:216604:221557:1 gene:EMLSAG00000002040 transcript:EMLSAT00000002040 description:"maker-LSalAtl2s136-augustus-gene-2.7")

HSP 1 Score: 68.9366 bits (167), Expect = 2.155e-14
Identity = 52/184 (28.26%), Postives = 89/184 (48.37%), Query Frame = 0

Query:   36 PLRKIKCVLLGDGAVGKTSLIISYTTNGYPQEYVPT-AIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFD--AAILAGL 216
            PLRK K V LG+ +VGKTSLI  +  + +   Y  T  ID     + ++   V L++ DT GQ+ F +L P     + V ++ +     +SF +   KW+ +++    +G    ++L+G ++DL E      E   +KA  ++               ++E+SA    N+K +F   AA L G+
Sbjct:   10 PLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDTTNANSF-HQTSKWIDDVR--TERGSDVIIMLVGNKTDLSEKRQVPTEDGERKAKELNVM-------------FIETSAKAGYNVKLLFRRVAAXLPGM 177

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BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000001628 (supercontig:LSalAtl2s:LSalAtl2s128:1093888:1095612:1 gene:EMLSAG00000001628 transcript:EMLSAT00000001628 description:"augustus_masked-LSalAtl2s128-processed-gene-11.3")

HSP 1 Score: 65.855 bits (159), Expect = 8.124e-14
Identity = 35/123 (28.46%), Postives = 67/123 (54.47%), Query Frame = 0

Query:   39 KIKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDTY-DAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRE 160
              K VLLG+G VGKTS ++ Y  + + + ++ T   ++ +  + V G+ V L + DT GQ+ F  L P+ Y   +  +L + +    SF  ++  W+ EL++    G    ++++G ++D+ E
Sbjct:   13 NFKIVLLGEGCVGKTSCVLRYVDDQFNERHITTLQASFLNKRLNVRGKRVNLSIWDTAGQERFHALGPIYYRDANGAILVYDITDLDSFRKVK-VWIKELRK--MLGNKIILVIVGNKTDIEE 132

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BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000006497 (supercontig:LSalAtl2s:LSalAtl2s356:427912:429520:-1 gene:EMLSAG00000006497 transcript:EMLSAT00000006497 description:"maker-LSalAtl2s356-snap-gene-4.11")

HSP 1 Score: 67.3958 bits (163), Expect = 9.409e-14
Identity = 56/208 (26.92%), Postives = 93/208 (44.71%), Query Frame = 0

Query:   25 LAPPGVPQPLPPLRKIKCVLLGDGAVGKTSLIISYTTNGYPQEYVPT-AIDTYDAIVTVDGEPVTLEMCDTPGQDDF-DTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMP---PVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFDAAILAGLGGQRRQERRAA 227
            ++ P + Q L   R  K ++LGD  VGKT L   + +  +P     T  +D  +  +TVDGE + L++ DT GQ+ F  ++    Y + +  +  + + C +SF    +KW+ E +   AQG  P   P++++G           M     QK+  V    AQ+ A   G   + E+SA        V   A+   L  + +  R  A
Sbjct:    1 MSTPALDQKLKR-RTFKVIVLGDAGVGKTCLTFRFCSGSFPDGVDSTIGVDFREKNLTVDGEDIRLQLWDTAGQERFRRSMISHYYRNANAVVFVYDINCKNSFTPGLDKWIAECE---AQGLTPSKIPMVVLG-----------MFFADIQKSGCVPTLVAQRYADERGMPHF-ETSAKDDSKSDHV--DAVFMTLAHKLKHYRSGA 190

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BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000009511 (supercontig:LSalAtl2s:LSalAtl2s612:149458:156023:-1 gene:EMLSAG00000009511 transcript:EMLSAT00000009511 description:"maker-LSalAtl2s612-snap-gene-1.42")

HSP 1 Score: 68.5514 bits (166), Expect = 1.406e-13
Identity = 45/170 (26.47%), Postives = 86/170 (50.59%), Query Frame = 0

Query:   40 IKCVLLGDGAVGKTSLIISYTTNGYPQEYVPT-AIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVF 208
             K +L+GD  VGKT ++  ++ + +   ++ T  ID     + +DG+ + L++ DT GQ+ F T+    Y      +L + +    SF NI+  W+  ++  HA   +  +IL G + D+ +         R+K   V++   + LA   G  +++E+SA +  N++E F
Sbjct:   50 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFDNIK-NWIRNIEE-HASADVEKMIL-GNKCDIND---------RRK---VTKEKGEDLAIEYGI-KFMETSAKSSINVEEAF 203

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BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000003810 (supercontig:LSalAtl2s:LSalAtl2s206:331620:332132:-1 gene:EMLSAG00000003810 transcript:EMLSAT00000003810 description:"augustus_masked-LSalAtl2s206-processed-gene-3.4")

HSP 1 Score: 65.4698 bits (158), Expect = 1.681e-13
Identity = 45/147 (30.61%), Postives = 75/147 (51.02%), Query Frame = 0

Query:   62 NGYPQEYVPTAIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVF 208
            + + ++Y PT  D+Y   V +DGE V +++ DT GQ+D+  +R   +   + FL  FS+    SF   +E +  ++ R      +PP IL+G + DL +         RQ    VS A A++ A       Y+E+SA  + N+ +VF
Sbjct:    3 DEFVEDYEPTKADSYRKKVVLDGEDVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEDDSFQATQE-FREQILRVKGDDPVPPFILVGNKCDLTDK--------RQ----VSVATAKERANSWNVP-YVETSAKDRVNVDKVF 135

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BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000011581 (supercontig:LSalAtl2s:LSalAtl2s800:196338:197338:-1 gene:EMLSAG00000011581 transcript:EMLSAT00000011581 description:"maker-LSalAtl2s800-augustus-gene-2.36")

HSP 1 Score: 65.855 bits (159), Expect = 2.365e-13
Identity = 49/172 (28.49%), Postives = 81/172 (47.09%), Query Frame = 0

Query:   40 IKCVLLGDGAVGKTSLIISYTTNGYPQEYVPT-AIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMP--PVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVF 208
            +K ++LGD  VGKTSL+  Y    +  +Y  T   D     V VD + VT+++ DT GQ+ F +L    Y   D  +LC+ V   ++F ++ E W  E     +   +   P +++G + DL EN    ++ A+Q     +E              Y E+SA    N+++ F
Sbjct:    9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDQLVTMQIWDTAGQERFQSLGVAFYRGADCCVLCYDVTDANTFQSL-ESWRDEFLIQASPSDLDNFPFVVLGNKVDL-ENRAVSSKRAQQWCHSKNEVP------------YFETSAKEAINVEQAF 166

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BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000011153 (supercontig:LSalAtl2s:LSalAtl2s759:225438:227635:-1 gene:EMLSAG00000011153 transcript:EMLSAT00000011153 description:"maker-LSalAtl2s759-augustus-gene-2.13")

HSP 1 Score: 63.929 bits (154), Expect = 9.161e-13
Identity = 49/174 (28.16%), Postives = 81/174 (46.55%), Query Frame = 0

Query:   39 KIKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDT--YDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVI--LIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVF 208
            + K VLLG+ AVGK+SL++ +   G   E+  + I        + +D   V  E+ DT GQ+ + +L P+ Y      ++ + V    SF+  +  WV EL+R  +    P ++  L G ++DL      + E             AQ  A   G   ++E+SA T  N+ +VF
Sbjct:   21 QFKLVLLGESAVGKSSLVLRFV-KGQFHEFQESTIGAAFLTQTICLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDVTNQDSFIRAK-NWVKELQRQAS----PNIVIALAGNKADLNTKRLVIYE------------EAQTYAEENGL-LFMETSAKTALNVNDVF 175

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BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|172046189|sp|Q7L0Q8.1|RHOU_HUMAN (RecName: Full=Rho-related GTP-binding protein RhoU; AltName: Full=CDC42-like GTPase 1; AltName: Full=GTP-binding protein-like 1; AltName: Full=Rho GTPase-like protein ARHU; AltName: Full=Ryu GTPase; AltName: Full=Wnt-1 responsive Cdc42 homolog 1; Short=WRCH-1)

HSP 1 Score: 239.965 bits (611), Expect = 1.582e-78
Identity = 117/196 (59.69%), Postives = 144/196 (73.47%), Query Frame = 0

Query:   40 IKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFDAAILAGLGGQRRQERRAAQKQRRREK 235
            +KCVL+GDGAVGKTSL++SYTTNGYP EY+PTA D + A+V+VDG PV L++CDT GQD+FD LRPL Y +TD+FLLCFSVV PSSF N+ EKWVPE+ R H      P+IL+GTQSDLRE+   + EL + K  PV E AA+  A  I    Y+E SALTQKNLKEVFDAAI+AG+     Q++    K R  +K
Sbjct:   50 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEI-RCHCPKA--PIILVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLCAEEIKAASYIECSALTQKNLKEVFDAAIVAGIQYSDTQQQPKKSKSRTPDK 242

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BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|81872485|sp|Q9EQT3.1|RHOU_MOUSE (RecName: Full=Rho-related GTP-binding protein RhoU; AltName: Full=Rho GTPase-like protein ARHU; AltName: Full=Wnt-1 responsive Cdc42 homolog 1; Short=WRCH-1)

HSP 1 Score: 237.654 bits (605), Expect = 1.793e-77
Identity = 114/196 (58.16%), Postives = 144/196 (73.47%), Query Frame = 0

Query:   40 IKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFDAAILAGLGGQRRQERRAAQKQRRREK 235
            +KCVL+GDGAVGKTSL++SYTTNGYP EY+PTA D + A+V+VDG PV L++CDT GQD+FD LRPL Y +TD+FLLCFSVV P+SF N+ EKWVPE++R   +    P+IL+GTQSDLRE+   + EL + K  PV E AA+  A  +    Y+E SALTQKNLKEVFDAAI+AG+     Q +    K R  +K
Sbjct:   53 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPTSFQNVGEKWVPEIRRHCPKA---PIILVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLCAEEVKAVSYIECSALTQKNLKEVFDAAIVAGIQHSDSQLQPKKSKSRTPDK 245

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BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|172047278|sp|A5D7J5.1|RHOU_BOVIN (RecName: Full=Rho-related GTP-binding protein RhoU)

HSP 1 Score: 236.498 bits (602), Expect = 4.166e-77
Identity = 116/196 (59.18%), Postives = 143/196 (72.96%), Query Frame = 0

Query:   40 IKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFDAAILAGLGGQRRQERRAAQKQRRREK 235
            +KCVL+GDGAVGKTSL++SYTTNGYP EY+PTA D + A+V+VDG PV L++CDT GQD+FD LRPL Y + D+FLLCFSVV PSSF N+ EKWVPE+ R H      P+IL+GTQSDLRE+   + EL + K  PV E AA+  A  I    Y+E SALTQKNLKEVFDAAI+AG+     Q++    K R  +K
Sbjct:   47 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVKLQLCDTAGQDEFDKLRPLCYTNADIFLLCFSVVGPSSFQNVSEKWVPEI-RCHCPKA--PIILVGTQSDLREDVKVLIELDKCKEKPVPEEAARLCAEEIKATSYIECSALTQKNLKEVFDAAIVAGIQYSDSQQQPKKSKSRTPDK 239

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BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|81882106|sp|Q9Z1Y0.1|RHOV_RAT (RecName: Full=Rho-related GTP-binding protein RhoV; AltName: Full=Rho family GTPase Chp)

HSP 1 Score: 214.927 bits (546), Expect = 6.883e-69
Identity = 112/199 (56.28%), Postives = 139/199 (69.85%), Query Frame = 0

Query:   40 IKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELAR-QKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFDAAILAGLGGQRRQERRAAQKQRRREKRC 237
            IKCVL+GDGAVGK+SLI+SYT NGYP  Y PTA+DT+   V VDG PV +E+ DT GQ+DFD LR L YP TDVFL CFSVV PSSF NI EKW+PE++  + Q    PV+L+GTQ+DLR++   + +L +  +  PV E  AQ LA  I    YLE SALTQKNLKEVFD+AIL+ +  + R E++   K  R   RC
Sbjct:   32 IKCVLVGDGAVGKSSLIVSYTCNGYPSRYRPTALDTFSVQVLVDGAPVRIELWDTAGQEDFDRLRSLCYPDTDVFLACFSVVQPSSFQNITEKWLPEIRTHNPQA---PVLLVGTQADLRDDVNVLIQLDQGGREGPVPEPQAQGLAEKIRACCYLECSALTQKNLKEVFDSAILSAIEHKARLEKKLNAKGVRTLSRC 227

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BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|121993808|sp|Q29HY3.1|CDC42_DROPS (RecName: Full=Cdc42 homolog; Flags: Precursor)

HSP 1 Score: 213.001 bits (541), Expect = 8.129e-69
Identity = 102/180 (56.67%), Postives = 130/180 (72.22%), Query Frame = 0

Query:   37 LRKIKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFDAAILAGL 216
            ++ IKCV++GDGAVGKT L+ISYTTN +P EYVPT  D Y   V + GEP TL + DT GQ+D+D LRPL+YP TDVFL+CFSVV PSSF N++EKWVPE+   H Q    P +L+GTQ DLR+  +T+ +LA+ K  P++    +KLA  +   +Y+E SALTQK LK VFD AILA L
Sbjct:    1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH-HCQKT--PFLLVGTQIDLRDETSTLEKLAKNKQKPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAAL 177

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BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|729077|sp|P40793.1|CDC42_DROME (RecName: Full=Cdc42 homolog; Flags: Precursor)

HSP 1 Score: 212.616 bits (540), Expect = 1.115e-68
Identity = 102/180 (56.67%), Postives = 130/180 (72.22%), Query Frame = 0

Query:   37 LRKIKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFDAAILAGL 216
            ++ IKCV++GDGAVGKT L+ISYTTN +P EYVPT  D Y   V + GEP TL + DT GQ+D+D LRPL+YP TDVFL+CFSVV PSSF N++EKWVPE+   H Q    P +L+GTQ DLR+  +T+ +LA+ K  P++    +KLA  +   +Y+E SALTQK LK VFD AILA L
Sbjct:    1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH-HCQKT--PFLLVGTQIDLRDENSTLEKLAKNKQKPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAAL 177

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BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|122068024|sp|Q16YG0.1|CDC42_AEDAE (RecName: Full=Cdc42 homolog; Flags: Precursor)

HSP 1 Score: 212.616 bits (540), Expect = 1.299e-68
Identity = 102/180 (56.67%), Postives = 130/180 (72.22%), Query Frame = 0

Query:   37 LRKIKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFDAAILAGL 216
            ++ IKCV++GDGAVGKT L+ISYTTN +P EYVPT  D Y   V + GEP TL + DT GQ+D+D LRPL+YP TDVFL+CFSVV PSSF N++EKWVPE+   H Q    P +L+GTQ DLR+  +T+ +LA+ K  P++    +KLA  +   +Y+E SALTQK LK VFD AILA L
Sbjct:    1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH-HCQKT--PFLLVGTQIDLRDEQSTLEKLAKNKQKPITLEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAAL 177

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BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|97535840|sp|Q17031.2|CDC42_ANOGA (RecName: Full=Cdc42 homolog; AltName: Full=25 kDa GTP-binding protein; Flags: Precursor)

HSP 1 Score: 212.231 bits (539), Expect = 1.530e-68
Identity = 102/180 (56.67%), Postives = 130/180 (72.22%), Query Frame = 0

Query:   37 LRKIKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFDAAILAGL 216
            ++ IKCV++GDGAVGKT L+ISYTTN +P EYVPT  D Y   V + GEP TL + DT GQ+D+D LRPL+YP TDVFL+CFSVV PSSF N++EKWVPE+   H Q    P +L+GTQ DLR+  +T+ +LA+ K  P++    +KLA  +   +Y+E SALTQK LK VFD AILA L
Sbjct:    1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH-HCQKT--PFLLVGTQIDLRDENSTLEKLAKNKQKPITLEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAAL 177

[Close]

BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|122145745|sp|Q17QI8.1|RHOV_BOVIN (RecName: Full=Rho-related GTP-binding protein RhoV)

HSP 1 Score: 213.772 bits (543), Expect = 1.680e-68
Identity = 116/216 (53.70%), Postives = 145/216 (67.13%), Query Frame = 0

Query:   23 APLAPPGVPQPLPPLRKIKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELAR-QKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFDAAILAGLGGQRRQERRAAQKQRRREKRC 237
            +P  PPG     P L  IKCVL+GDGAVGK+SLI+SYT NGYP  Y PTA+DT+   V VDG PV +E+ DT GQ+D D LR L YP TDVFL CFSVV PSSF NI EKW+PE++  + Q    PV+L+GTQ+DLR++   + +L +  +  PV +  AQ LA  I    YLE SALTQKNLKEVFD+AIL+ +  + R E++   K  R   RC
Sbjct:   16 SPTPPPGRGSASPEL-GIKCVLVGDGAVGKSSLIVSYTCNGYPARYRPTALDTFSVQVLVDGAPVRIELWDTAGQEDLDRLRSLCYPDTDVFLACFSVVQPSSFQNITEKWLPEIRTHNPQA---PVLLVGTQADLRDDVNVLIQLDQGGREGPVPQPQAQGLAEKIRACCYLECSALTQKNLKEVFDSAILSAIEHKARLEKKLNAKGVRTLSRC 227

[Close]

BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|74724228|sp|Q96L33.1|RHOV_HUMAN (RecName: Full=Rho-related GTP-binding protein RhoV; AltName: Full=CDC42-like GTPase 2; AltName: Full=GTP-binding protein-like 2; AltName: Full=Rho GTPase-like protein ARHV; AltName: Full=Wnt-1 responsive Cdc42 homolog 2; Short=WRCH-2)

HSP 1 Score: 213.001 bits (541), Expect = 2.992e-68
Identity = 111/199 (55.78%), Postives = 139/199 (69.85%), Query Frame = 0

Query:   40 IKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELAR-QKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFDAAILAGLGGQRRQERRAAQKQRRREKRC 237
            IKCVL+GDGAVGK+SLI+SYT NGYP  Y PTA+DT+   V VDG PV +E+ DT GQ+DFD LR L YP TDVFL CFSVV PSSF NI EKW+PE++  + Q    PV+L+GTQ+DLR++   + +L +  +  PV +  AQ LA  I    YLE SALTQKNLKEVFD+AIL+ +  + R E++   K  R   RC
Sbjct:   32 IKCVLVGDGAVGKSSLIVSYTCNGYPARYRPTALDTFSVQVLVDGAPVRIELWDTAGQEDFDRLRSLCYPDTDVFLACFSVVQPSSFQNITEKWLPEIRTHNPQA---PVLLVGTQADLRDDVNVLIQLDQGGREGPVPQPQAQGLAEKIRACCYLECSALTQKNLKEVFDSAILSAIEHKARLEKKLNAKGVRTLSRC 227

[Close]

BLAST of rho-related gtp-binding protein vs. nr
Match: gi|1325327918|ref|XP_023345810.1| (cell division control protein 42 homolog [Eurytemora affinis])

HSP 1 Score: 266.544 bits (680), Expect = 3.850e-85
Identity = 124/186 (66.67%), Postives = 155/186 (83.33%), Query Frame = 0

Query:   38 RKIKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFDAAILAGLGGQRRQE 223
             KIKCV +GDGAVGKTSLIISYTTNGYP EYVPTAIDTY A+V VDG+P+TLE+CDTPGQDDFDTLRPL YP+TDVFLLCFSV  PSSF N+REKW+PE++ +   G++ PV+L+GTQSDLRE+A T+ +L + K  PV E  A+KLA  +G E Y+E S+LTQ+NLK+VFD+AI+AG+  ++ +E
Sbjct:  152 NKIKCVFIGDGAVGKTSLIISYTTNGYPNEYVPTAIDTYHAVVHVDGQPLTLELCDTPGQDDFDTLRPLVYPNTDVFLLCFSVALPSSFHNVREKWIPEVRAS--CGKV-PVVLVGTQSDLREDAKTLVQLRQTKEHPVQEHEARKLAQSLGCEMYVECSSLTQRNLKDVFDSAIVAGISSRKSRE 334

[Close]

BLAST of rho-related gtp-binding protein vs. nr
Match: gi|290562231|gb|ADD38512.1| (Rho-related GTP-binding protein RhoU [Lepeophtheirus salmonis])

HSP 1 Score: 258.455 bits (659), Expect = 4.431e-84
Identity = 120/182 (65.93%), Postives = 147/182 (80.77%), Query Frame = 0

Query:   35 PPLRKIKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFDAAILAGL 216
            P  ++IKCV LGDGAVGKTSLI++YTT+GY  EYVPTAIDTYD +V VDG P+T EMCDTPGQ+DFD LRPL YP+TDVF+LCFSVV P+SF NI+EKW+PELK+  +  R  PV+L+GTQSDLRE+  T+ EL R   APV+E  A+K+A  +G + Y+ESSALTQKNLKE+FD AI  G+
Sbjct:    7 PDSKRIKCVFLGDGAVGKTSLIVAYTTDGYTSEYVPTAIDTYDVVVRVDGVPLTFEMCDTPGQEDFDDLRPLVYPNTDVFILCFSVVSPTSFKNIKEKWIPELKKRSS--RKTPVLLVGTQSDLREDVNTLLELNRNYEAPVTENEAKKMASALGCKGYVESSALTQKNLKEIFDEAITLGI 186

[Close]

BLAST of rho-related gtp-binding protein vs. nr
Match: gi|225714364|gb|ACO13028.1| (Rho-related GTP-binding protein RhoU [Lepeophtheirus salmonis])

HSP 1 Score: 258.07 bits (658), Expect = 8.261e-84
Identity = 119/182 (65.38%), Postives = 147/182 (80.77%), Query Frame = 0

Query:   35 PPLRKIKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFDAAILAGL 216
            P  ++IKCV LGDGAVGKTSL+++YTT+GY  EYVPTAIDTYD +V VDG P+T EMCDTPGQ+DFD LRPL YP+TDVF+LCFSVV P+SF NI+EKW+PELK+  +  R  PV+L+GTQSDLRE+  T+ EL R   APV+E  A+K+A  +G + Y+ESSALTQKNLKE+FD AI  G+
Sbjct:    7 PDSKRIKCVFLGDGAVGKTSLVVAYTTDGYTSEYVPTAIDTYDGVVRVDGVPLTFEMCDTPGQEDFDDLRPLVYPNTDVFILCFSVVSPTSFKNIKEKWIPELKKRSS--RKTPVLLVGTQSDLREDVNTLLELNRNYEAPVTENEAKKMASALGCKGYVESSALTQKNLKEIFDEAITLGI 186

[Close]

BLAST of rho-related gtp-binding protein vs. nr
Match: gi|908412113|ref|XP_013067179.1| (PREDICTED: cell division control protein 42 homolog [Biomphalaria glabrata] >gi|908412115|ref|XP_013067180.1| PREDICTED: cell division control protein 42 homolog [Biomphalaria glabrata] >gi|908412117|ref|XP_013067181.1| PREDICTED: cell division control protein 42 homolog [Biomphalaria glabrata])

HSP 1 Score: 253.832 bits (647), Expect = 1.702e-81
Identity = 135/248 (54.44%), Postives = 165/248 (66.53%), Query Frame = 0

Query:    1 MPPASPARAGRGSGGARPWAPLAPLAPPGVPQPLPPLRKIKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFDAAILAGLG----GQRRQERRAAQKQ--RRREKRCLGRGG 242
            MPP +P      S    P +    L  P       P RK+KCVL+GDGAVGKTSLI+SYTTNGYP EY+PTA D Y  +VTVD  PV L++CDT GQDDFDT+RPL YPHTD+FLLCFSVV P+SF N+ EKWVPE+ R HA  R  P++L+GTQ DLR +   + ELA  K  PVSE+ A KLA  IG   Y+E SALTQKNLK+VFD AILA L     G+ ++ R++ +K   + R    L + G
Sbjct:    1 MPPHTPVM--DHSTNLLPESETNSLRCPNGSPVNQPSRKVKCVLVGDGAVGKTSLIVSYTTNGYPTEYMPTAFDDYSVVVTVDSRPVQLQLCDTAGQDDFDTIRPLCYPHTDIFLLCFSVVSPTSFNNVVEKWVPEI-RKHA--RDIPIMLVGTQCDLRNDVKILIELAGYKEKPVSESDAAKLAEDIGAVGYMECSALTQKNLKDVFDQAILAALNITDLGRSKEIRKSRKKLSIQDRHSSSLKKAG 243

[Close]

BLAST of rho-related gtp-binding protein vs. nr
Match: gi|918316358|gb|KOF85693.1| (hypothetical protein OCBIM_22019947mg [Octopus bimaculoides])

HSP 1 Score: 250.751 bits (639), Expect = 2.491e-80
Identity = 118/179 (65.92%), Postives = 145/179 (81.01%), Query Frame = 0

Query:   39 KIKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFDAAILAGLG 217
            K+KCVL+GDGA+GKTSLI+SYTTNGYP EYVPTA D Y  +V+V+ +PV+L++CDT GQDDFD+LRPL YP+TDVFLLCFSVVCPSSF NI +KW+PE+ R H+     P+ILIGTQ DLR +   + ELAR K AP++EA AQ+LA  IG   Y+E SALTQKNLKEVFD+AI++ L 
Sbjct:   39 KVKCVLVGDGAIGKTSLIVSYTTNGYPTEYVPTAFDNYSVVVSVNNKPVSLQLCDTAGQDDFDSLRPLCYPNTDVFLLCFSVVCPSSFHNILDKWLPEV-RQHSPKT--PIILIGTQCDLRNDVKILIELARYKEAPIAEADAQRLACQIGAYSYIECSALTQKNLKEVFDSAIISALN 214

[Close]

BLAST of rho-related gtp-binding protein vs. nr
Match: gi|1067060712|ref|XP_018014524.1| (PREDICTED: rho-related GTP-binding protein RhoU-like [Hyalella azteca])

HSP 1 Score: 251.521 bits (641), Expect = 2.884e-80
Identity = 125/219 (57.08%), Postives = 156/219 (71.23%), Query Frame = 0

Query:   39 KIKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFDAAILAGLGGQR-----------RQERRAAQKQRRREK----RCLGRGG 242
            KIKCVL+GDGAVGKTSLI+SYTTNGYP EYVPTA D Y  +VTVD  P+ L++CDT GQDDFD+LRPL YP +DVFL+CFSVV P+SF+N++EKW+PEL+R        PV+L+GTQSDLR +   + ELA+ +  PVSEAAA+KLA HIG   Y+ESSALTQ+NLKEVFD A++A L  +               R + +   RR+K     C+G  G
Sbjct:   36 KIKCVLIGDGAVGKTSLIVSYTTNGYPTEYVPTAFDNYSVVVTVDSRPIRLQLCDTAGQDDFDSLRPLCYPGSDVFLVCFSVVSPTSFLNVKEKWLPELQRHWPSA---PVLLVGTQSDLRTDVKVLIELAQDQEQPVSEAAARKLARHIGAYGYVESSALTQRNLKEVFDQALMAALDAKNNINLLNNGRLIHNNRDSFRNHVRRKKPSANLCVGGDG 251

[Close]

BLAST of rho-related gtp-binding protein vs. nr
Match: gi|902871844|ref|XP_013055261.1| (PREDICTED: rho-related GTP-binding protein RhoU [Anser cygnoides domesticus])

HSP 1 Score: 247.284 bits (630), Expect = 2.274e-79
Identity = 121/200 (60.50%), Postives = 148/200 (74.00%), Query Frame = 0

Query:   36 PLRKIKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFDAAILAGLGGQRRQERRAAQKQRRREK 235
            P R IKCVL+GDGAVGKTSL++SYTTNGYP EY+PTA D + A+V+VDG+PV L++CDT GQD+FD LRPL Y +TD+FLLCFSVV PSSF N+ EKWVPE+ R H      P+IL+GTQSDLRE+   + EL + K  PVSE AA+  A  I    Y+E SALTQKNLKEVFDAAI+AG+     Q++    K R  +K
Sbjct:    9 PRRSIKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGKPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEI-RCHCPK--APIILVGTQSDLREDVKVLIELDKCKEKPVSEEAAKLCAEEIKAASYIECSALTQKNLKEVFDAAIVAGIQYSDTQQQPKKSKCRTPDK 205

[Close]

BLAST of rho-related gtp-binding protein vs. nr
Match: gi|676460869|ref|XP_009055762.1| (hypothetical protein LOTGIDRAFT_150227 [Lottia gigantea] >gi|556104911|gb|ESO93563.1| hypothetical protein LOTGIDRAFT_150227 [Lottia gigantea])

HSP 1 Score: 247.669 bits (631), Expect = 2.464e-79
Identity = 119/198 (60.10%), Postives = 146/198 (73.74%), Query Frame = 0

Query:   35 PPLRKIKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFDAAILAGLGGQRRQERRAAQKQRR 232
            P    +KCVL+GDGAVGKTSLI+SYTTNGYP EYVPTA D +  +VTVD  PV L++CDT GQDDFDTLRPL YP+TDVFL+CFSVV P+SF N+ +KWVPE+K+   +    P++L+GTQ DLR +   + ELAR K APVSE  A  LA +IG  +Y+E SALTQKNLKEVFD AIL  L      +R  ++K +R
Sbjct:   17 PDQHPVKCVLIGDGAVGKTSLIVSYTTNGYPTEYVPTAFDHFSVLVTVDNNPVRLQLCDTAGQDDFDTLRPLCYPNTDVFLVCFSVVSPTSFKNVVDKWVPEIKKHSPKT---PIVLVGTQGDLRNDVQILIELARYKEAPVSEEEATVLADYIGAMQYVECSALTQKNLKEVFDTAILVSLKLTSALKRTPSRKSKR 211

[Close]

BLAST of rho-related gtp-binding protein vs. nr
Match: gi|961098050|ref|XP_014774457.1| (PREDICTED: cell division control protein 42 homolog [Octopus bimaculoides])

HSP 1 Score: 251.521 bits (641), Expect = 2.661e-79
Identity = 118/179 (65.92%), Postives = 145/179 (81.01%), Query Frame = 0

Query:   39 KIKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFDAAILAGLG 217
            K+KCVL+GDGA+GKTSLI+SYTTNGYP EYVPTA D Y  +V+V+ +PV+L++CDT GQDDFD+LRPL YP+TDVFLLCFSVVCPSSF NI +KW+PE+ R H+     P+ILIGTQ DLR +   + ELAR K AP++EA AQ+LA  IG   Y+E SALTQKNLKEVFD+AI++ L 
Sbjct:  138 KVKCVLVGDGAIGKTSLIVSYTTNGYPTEYVPTAFDNYSVVVSVNNKPVSLQLCDTAGQDDFDSLRPLCYPNTDVFLLCFSVVCPSSFHNILDKWLPEV-RQHSPKT--PIILIGTQCDLRNDVKILIELARYKEAPIAEADAQRLACQIGAYSYIECSALTQKNLKEVFDSAIISALN 313

[Close]

BLAST of rho-related gtp-binding protein vs. nr
Match: gi|527255617|ref|XP_005146090.1| (PREDICTED: rho-related GTP-binding protein RhoU [Melopsittacus undulatus])

HSP 1 Score: 247.284 bits (630), Expect = 3.062e-79
Identity = 121/200 (60.50%), Postives = 148/200 (74.00%), Query Frame = 0

Query:   36 PLRKIKCVLLGDGAVGKTSLIISYTTNGYPQEYVPTAIDTYDAIVTVDGEPVTLEMCDTPGQDDFDTLRPLAYPHTDVFLLCFSVVCPSSFVNIREKWVPELKRTHAQGRMPPVILIGTQSDLRENATTMAELARQKAAPVSEAAAQKLAGHIGFERYLESSALTQKNLKEVFDAAILAGLGGQRRQERRAAQKQRRREK 235
            P R IKCVL+GDGAVGKTSL++SYTTNGYP EY+PTA D + A+V+VDG+PV L++CDT GQD+FD LRPL Y +TD+FLLCFSVV PSSF N+ EKWVPE+ R H      P+IL+GTQSDLRE+   + EL + K  PVSE AA+  A  I    Y+E SALTQKNLKEVFDAAI+AG+     Q++    K R  +K
Sbjct:   20 PRRSIKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGKPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEI-RCHCPK--APIILVGTQSDLREDVKVLIELDKCKEKPVSEEAAKLCAEEIKAASYIECSALTQKNLKEVFDAAIMAGIQYSDTQQQPKKSKCRTPDK 216

The following BLAST results are available for this feature:

BLAST of rho-related gtp-binding protein vs. L. salmonis genes
BLAST of rho-related gtp-binding protein vs. SwissProt
BLAST of rho-related gtp-binding protein vs. nr

BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25


Match Name	E-value	Identity	Description
EMLSAG00000009627	1.829e-18	31.63	supercontig:LSalAtl2s:LSalAtl2s619:14755:19285:-1 ...	[more]
EMLSAG00000004714	1.438e-16	27.43	supercontig:LSalAtl2s:LSalAtl2s248:219542:223971:-...	[more]
EMLSAG00000001458	1.942e-14	28.19	supercontig:LSalAtl2s:LSalAtl2s1248:131241:136261:...	[more]
EMLSAG00000002040	2.155e-14	28.26	supercontig:LSalAtl2s:LSalAtl2s136:216604:221557:1...	[more]
EMLSAG00000001628	8.124e-14	28.46	supercontig:LSalAtl2s:LSalAtl2s128:1093888:1095612...	[more]
EMLSAG00000006497	9.409e-14	26.92	supercontig:LSalAtl2s:LSalAtl2s356:427912:429520:-...	[more]
EMLSAG00000009511	1.406e-13	26.47	supercontig:LSalAtl2s:LSalAtl2s612:149458:156023:-...	[more]
EMLSAG00000003810	1.681e-13	30.61	supercontig:LSalAtl2s:LSalAtl2s206:331620:332132:-...	[more]
EMLSAG00000011581	2.365e-13	28.49	supercontig:LSalAtl2s:LSalAtl2s800:196338:197338:-...	[more]
EMLSAG00000011153	9.161e-13	28.16	supercontig:LSalAtl2s:LSalAtl2s759:225438:227635:-...	[more]

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BLAST of rho-related gtp-binding protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|172046189\|sp\|Q7L0Q8.1\|RHOU_HUMAN	1.582e-78	59.69	RecName: Full=Rho-related GTP-binding protein RhoU...	[more]
gi\|81872485\|sp\|Q9EQT3.1\|RHOU_MOUSE	1.793e-77	58.16	RecName: Full=Rho-related GTP-binding protein RhoU...	[more]
gi\|172047278\|sp\|A5D7J5.1\|RHOU_BOVIN	4.166e-77	59.18	RecName: Full=Rho-related GTP-binding protein RhoU	[more]
gi\|81882106\|sp\|Q9Z1Y0.1\|RHOV_RAT	6.883e-69	56.28	RecName: Full=Rho-related GTP-binding protein RhoV...	[more]
gi\|121993808\|sp\|Q29HY3.1\|CDC42_DROPS	8.129e-69	56.67	RecName: Full=Cdc42 homolog; Flags: Precursor	[more]
gi\|729077\|sp\|P40793.1\|CDC42_DROME	1.115e-68	56.67	RecName: Full=Cdc42 homolog; Flags: Precursor	[more]
gi\|122068024\|sp\|Q16YG0.1\|CDC42_AEDAE	1.299e-68	56.67	RecName: Full=Cdc42 homolog; Flags: Precursor	[more]
gi\|97535840\|sp\|Q17031.2\|CDC42_ANOGA	1.530e-68	56.67	RecName: Full=Cdc42 homolog; AltName: Full=25 kDa ...	[more]
gi\|122145745\|sp\|Q17QI8.1\|RHOV_BOVIN	1.680e-68	53.70	RecName: Full=Rho-related GTP-binding protein RhoV	[more]
gi\|74724228\|sp\|Q96L33.1\|RHOV_HUMAN	2.992e-68	55.78	RecName: Full=Rho-related GTP-binding protein RhoV...	[more]

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BLAST of rho-related gtp-binding protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1325327918\|ref\|XP_023345810.1\|	3.850e-85	66.67	cell division control protein 42 homolog [Eurytemo...	[more]
gi\|290562231\|gb\|ADD38512.1\|	4.431e-84	65.93	Rho-related GTP-binding protein RhoU [Lepeophtheir...	[more]
gi\|225714364\|gb\|ACO13028.1\|	8.261e-84	65.38	Rho-related GTP-binding protein RhoU [Lepeophtheir...	[more]
gi\|908412113\|ref\|XP_013067179.1\|	1.702e-81	54.44	PREDICTED: cell division control protein 42 homolo...	[more]
gi\|918316358\|gb\|KOF85693.1\|	2.491e-80	65.92	hypothetical protein OCBIM_22019947mg [Octopus bim...	[more]
gi\|1067060712\|ref\|XP_018014524.1\|	2.884e-80	57.08	PREDICTED: rho-related GTP-binding protein RhoU-li...	[more]
gi\|902871844\|ref\|XP_013055261.1\|	2.274e-79	60.50	PREDICTED: rho-related GTP-binding protein RhoU [A...	[more]
gi\|676460869\|ref\|XP_009055762.1\|	2.464e-79	60.10	hypothetical protein LOTGIDRAFT_150227 [Lottia gig...	[more]
gi\|961098050\|ref\|XP_014774457.1\|	2.661e-79	65.92	PREDICTED: cell division control protein 42 homolo...	[more]
gi\|527255617\|ref\|XP_005146090.1\|	3.062e-79	60.50	PREDICTED: rho-related GTP-binding protein RhoU [M...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold1063_size65393	supercontig	scaffold1063_size65393:9809..10549 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold1063_size65393-processed-gene-0.9-mRNA-1	snap_masked-scaffold1063_size65393-processed-gene-0.9-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold1063_size65393:9809..10549-

gene from alignment at scaffold1063_size65393:9809..10549-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold1063_size65393-processed-gene-0.9 ID=snap_masked-scaffold1063_size65393-processed-gene-0.9|Name=rho-related gtp-binding protein|organism=Tigriopus kingsejongensis|type=gene|length=741bp|location=Sequence derived from alignment at scaffold1063_size65393:9809..10549- (Tigriopus kingsejongensis)
ATGCCGCCCGCTTCTCCGGCTCGAGCGGGGCGGGGCAGCGGGGGGGCCCG
CCCCTGGGCCCCGTTGGCCCCGTTGGCGCCCCCCGGCGTGCCCCAGCCCC
TGCCGCCCCTGCGCAAGATCAAGTGCGTGCTCCTGGGCGACGGGGCCGTG
GGCAAGACCTCGCTCATCATCTCGTACACCACCAACGGCTACCCGCAGGA
GTACGTGCCCACGGCCATCGACACCTACGACGCCATCGTGACCGTGGACG
GCGAGCCCGTCACGCTCGAGATGTGCGACACGCCCGGCCAGGACGACTTC
GACACGCTCCGCCCGCTGGCCTATCCGCACACGGACGTGTTCCTGCTCTG
CTTCTCGGTCGTCTGTCCGTCCTCCTTCGTCAACATTCGCGAGAAGTGGG
TGCCCGAGCTCAAGCGGACCCACGCCCAGGGCCGCATGCCGCCCGTCATC
CTCATCGGCACCCAGTCCGACCTGCGCGAGAACGCCACCACCATGGCCGA
GCTGGCGCGCCAGAAGGCGGCGCCGGTCAGCGAGGCCGCGGCCCAGAAGC
TGGCCGGCCACATCGGCTTCGAGCGCTACCTGGAGAGCTCGGCGCTCACG
CAGAAGAACCTCAAGGAGGTCTTCGACGCGGCTATCCTGGCCGGCCTGGG
CGGGCAGCGCCGCCAGGAGCGGCGGGCCGCCCAGAAGCAGCGGCGCCGCG
AGAAGAGGTGCCTGGGCCGGGGCGGCTGCCTCCTCATGTGA

Synonyms

The feature 'rho-related gtp-binding protein' has the following synonyms


Synonym
Tk02167

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