ecdysone receptor, snap_masked-scaffold106_size358372-processed-gene-0.6 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of ecdysone receptor vs. L. salmonis genes
Match: EMLSAG00000007741 (supercontig:LSalAtl2s:LSalAtl2s450:172104:174744:-1 gene:EMLSAG00000007741 transcript:EMLSAT00000007741 description:"maker-LSalAtl2s450-snap-gene-2.9") HSP 1 Score: 91.6633 bits (226), Expect = 1.241e-19 Identity = 42/98 (42.86%), Postives = 57/98 (58.16%), Query Frame = 0 Query: 176 CTVCGDRASGYHYNALACEGCKGFFRRSITKNSSYSCK----YGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQCQKKRAIKQAQKAAQNGD 269 C VCGDR+SG HY +C+GC GFF+RSI + Y+CK + C ID R +C+ACRLKKC+ M + V E +K + K A +NG+ Sbjct: 108 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRQRIYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDCSMNKDAVQHERGPRKSKLQKDLNSAFRNGN 205
BLAST of ecdysone receptor vs. L. salmonis genes
Match: EMLSAG00000012651 (supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 gene:EMLSAG00000012651 transcript:EMLSAT00000012651 description:"maker-LSalAtl2s959-snap-gene-0.24") HSP 1 Score: 90.1225 bits (222), Expect = 1.947e-19 Identity = 51/170 (30.00%), Postives = 81/170 (47.65%), Query Frame = 0 Query: 100 PPSSFSPPVNGYGHAPQRHNSSNS-----SVSSPSSQPGGFFVKSESNPPLTPNQAVQEYARLQENERKKKGPVPRPQEELCTVCGDRASGY-HYNALACEGCKGFFRRSITKNSSYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQCQKKRAIKQAQK 263 P S F V + H H +SN+ + S+ G + ++ T + N++++K P+ E +C VCGD+A + HY +AC C+ FFRRS+ K+++Y C C I + R+ CQ CR KKC GM+ V+ E + + IK +K Sbjct: 19 PMSLFHGSVTAHQHFLSLHQASNTHNLILNKSNIKKSTGNISLNLQNERKTTDTNLIDI------NKKRRK---PKMTEMVCNVCGDKAPDHIHYGGIACFSCRAFFRRSVPKHTTYFCSTDQACMITITTRKNCQFCRYKKCLESGMKPSWVLSEEEKSSRNLIKYVRK 179
BLAST of ecdysone receptor vs. L. salmonis genes
Match: EMLSAG00000008543 (supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1 gene:EMLSAG00000008543 transcript:EMLSAT00000008543 description:"maker-LSalAtl2s527-augustus-gene-1.53") HSP 1 Score: 87.0409 bits (214), Expect = 3.467e-18 Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 0 Query: 167 PVPRPQEEL-CTVCGDRASGYHYNALACEGCKGFFRRSITKNSSYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECV 246 P +PQ+ L C +C DRA+G HY + CEGCKGFF+R++ Y+C CEI+ R +CQ CR +KC GM V Sbjct: 273 PSSQPQQSLVCMICEDRATGLHYGIITCEGCKGFFKRTVQNKRIYTCVADGECEINKAQRNRCQYCRFQKCLQKGMVLAAV 353
BLAST of ecdysone receptor vs. L. salmonis genes
Match: EMLSAG00000008071 (supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 gene:EMLSAG00000008071 transcript:EMLSAT00000008071 description:"snap_masked-LSalAtl2s47-processed-gene-3.10") HSP 1 Score: 85.1149 bits (209), Expect = 8.562e-18 Identity = 36/75 (48.00%), Postives = 46/75 (61.33%), Query Frame = 0 Query: 172 QEELCTVCGDRASGYHYNALACEGCKGFFRRSITKNSSYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECV 246 Q C VCGD ASG+HY +CE CK FF+R+I N Y+ + CEI+ R+ CQACR +KC +GM E V Sbjct: 267 QRRTCLVCGDIASGFHYGVSSCEACKAFFKRTIQGNIEYTXPASNECEINKRRRKACQACRFQKCLRMGMLKEGV 341
BLAST of ecdysone receptor vs. L. salmonis genes
Match: EMLSAG00000007894 (supercontig:LSalAtl2s:LSalAtl2s466:351370:353021:1 gene:EMLSAG00000007894 transcript:EMLSAT00000007894 description:"maker-LSalAtl2s466-augustus-gene-2.7") HSP 1 Score: 84.7297 bits (208), Expect = 8.973e-18 Identity = 37/76 (48.68%), Postives = 46/76 (60.53%), Query Frame = 0 Query: 176 CTVCGDRASGYHYNALACEGCKGFFRRSITKNSSYSCKYGD--GCEIDMYMRRKCQACRLKKCYTVGMRAECVVPE 249 C VC D +SG HY AC+GC GFF+RSI +N Y CK C +D R +C+ACRLK+C VGM + V E Sbjct: 34 CKVCTDHSSGKHYGIFACDGCAGFFKRSIRRNRLYVCKAKSEGSCLVDKTHRNQCRACRLKRCVDVGMNKDAVQHE 109
BLAST of ecdysone receptor vs. L. salmonis genes
Match: EMLSAG00000000733 (supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 gene:EMLSAG00000000733 transcript:EMLSAT00000000733 description:"maker-LSalAtl2s1117-snap-gene-1.23") HSP 1 Score: 85.5001 bits (210), Expect = 1.012e-17 Identity = 34/66 (51.52%), Postives = 43/66 (65.15%), Query Frame = 0 Query: 176 CTVCGDRASGYHYNALACEGCKGFFRRSITKNSSYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGM 241 C VCGD++SG HY + CEGCKGFFRRS + +Y C C +D R +CQ CRL+KC +GM Sbjct: 47 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGM 112
BLAST of ecdysone receptor vs. L. salmonis genes
Match: EMLSAG00000005620 (supercontig:LSalAtl2s:LSalAtl2s301:514440:538934:1 gene:EMLSAG00000005620 transcript:EMLSAT00000005620 description:"maker-LSalAtl2s301-augustus-gene-5.4") HSP 1 Score: 73.559 bits (179), Expect = 2.351e-15 Identity = 40/97 (41.24%), Postives = 57/97 (58.76%), Query Frame = 0 Query: 155 ARLQENER-------KKKGPVPRPQEELCTVCGDRASGYHYNALACEGCKGFFRRSITK---NSSYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGM 241 +R++E++R K++ P+ + ++C VC + A+GYH+ A CEGCK FF R+ K NS CK C ID R C+ACRL+KC VGM Sbjct: 13 SRMEEDKRLYLDSNSKEEDPM---RNQICRVCDEPAAGYHFGAFTCEGCKSFFGRTCGKSNLNSISECKNNYSCVIDKKNRTSCKACRLRKCLRVGM 106
BLAST of ecdysone receptor vs. L. salmonis genes
Match: EMLSAG00000005619 (supercontig:LSalAtl2s:LSalAtl2s301:354064:356113:1 gene:EMLSAG00000005619 transcript:EMLSAT00000005619 description:"maker-LSalAtl2s301-augustus-gene-3.7") HSP 1 Score: 76.6406 bits (187), Expect = 4.100e-15 Identity = 33/71 (46.48%), Postives = 42/71 (59.15%), Query Frame = 0 Query: 172 QEELCTVCGDRASGYHYNALACEGCKGFFRRSITKNSSY-SCKYGDGCEIDMYMRRKCQACRLKKCYTVGM 241 Q +LC VC + A+G+H+ A CEGCK FF R+ S CK C +D R C+ACRL+KC VGM Sbjct: 53 QNQLCRVCEEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCVVDKKNRTACKACRLRKCIMVGM 123
BLAST of ecdysone receptor vs. L. salmonis genes
Match: EMLSAG00000011907 (supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1 gene:EMLSAG00000011907 transcript:EMLSAT00000011907 description:"maker-LSalAtl2s83-augustus-gene-6.22") HSP 1 Score: 73.9442 bits (180), Expect = 2.884e-14 Identity = 35/99 (35.35%), Postives = 58/99 (58.59%), Query Frame = 0 Query: 164 KKGPVPRPQEELCTVCGDRASGY-HYNALACEGCKGFFRRSITKNSSYS----CKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQCQKKRA 257 ++ +PR LC +CG+ A + +Y C C+ FFRRS+ +N+SY C + C I++ R+ CQ CR +KC + GMRA V+P+ + + K++ Sbjct: 98 RREALPR----LCQICGEVAGKHVYYGGQCCTSCRAFFRRSV-QNNSYKQFSCCSKTEDCIINLQTRKSCQLCRFQKCISAGMRASWVLPDGERRSKKS 191
BLAST of ecdysone receptor vs. L. salmonis genes
Match: EMLSAG00000010267 (supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1 gene:EMLSAG00000010267 transcript:EMLSAT00000010267 description:"maker-LSalAtl2s680-augustus-gene-1.19") HSP 1 Score: 70.0922 bits (170), Expect = 4.754e-13 Identity = 34/98 (34.69%), Postives = 54/98 (55.10%), Query Frame = 0 Query: 165 KGPVPRPQEELCTVCGDRASGY-HYNALACEGCKGFFRRSITKNSSYS----CKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQCQKKRA 257 + +PR LC +CG+ A + +Y C C+ FFRRS+ +N+SY C C I++ R+ CQ CR +KC + GMR V P+ + + K++ Sbjct: 100 RQALPR----LCQICGEVAGKHVYYGGQCCTSCRAFFRRSV-QNNSYKQFICCSQTKDCIINLKTRKACQLCRFQKCVSAGMRVSWVFPDRERRSKKS 192
BLAST of ecdysone receptor vs. SwissProt
Match: gi|586092|sp|P10828.2|THB_HUMAN (RecName: Full=Thyroid hormone receptor beta; AltName: Full=Nuclear receptor subfamily 1 group A member 2; AltName: Full=c-erbA-2; AltName: Full=c-erbA-beta) HSP 1 Score: 185.652 bits (470), Expect = 2.034e-51 Identity = 124/403 (30.77%), Postives = 196/403 (48.64%), Query Frame = 0 Query: 148 NQAVQEYARLQENERKKKGPVPR--PQEELCTVCGDRASGYHYNALACEGCKGFFRRSITKNS--SYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQCQKKRAIKQAQKAAQNGDASSTTLMANNSSLSGGMGGRGTPLAIGGPGLSS-NHNSIPSALAPRHLKPEEEELINRIVYYQDEFENPTAEDLNRVYHVPLHPVNNDATGNESESDRLFQHMTEMTILTVQLIVEFTKHLPGFPTLCREDQVSLLKGCSSEVMMLRGARRYDPQRDSIIYATNYPFSKDNYVKAGLG--NDALFRFCRNMCKMKVDNAEYALITAIVIF-SERHNVKEPKRVEKIQEIYVEALQSYVMAKQKKEPMVAFA-KLLSVLTELRSLGNNNAKTCFNLRM 541 +Q+V Q E+K KG +P ++ELC VCGD+A+GYHY + CEGCKGFFRR+I KN SYSCKY C ID R +CQ CR KKC VGM + V+ +S+ KR + L +G + P + + + + H K + + L ED+ + P+ N G + + + F H T++ + +V+F K LP F L EDQ+ LLKGC E+M LR A RYDP+ +++ ++ GLG +DA+F ++ +D+ E AL+ A+++ S+R + +R+EK Q+ ++ A + Y+ +K + F KLL +T+LR +G +A ++++ Sbjct: 77 DQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKL-----------IEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWKQKRKFL---------------PEDIGQA------PIVNAPEGGKVDLEA-FSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYI--NYRKHHVTHFWPKLLMKVTDLRMIGACHASRFLHMKV 444
BLAST of ecdysone receptor vs. SwissProt
Match: gi|586094|sp|P18113.2|THB_RAT (RecName: Full=Thyroid hormone receptor beta; AltName: Full=Nuclear receptor subfamily 1 group A member 2; AltName: Full=c-erbA-2; AltName: Full=c-erbA-beta) HSP 1 Score: 185.652 bits (470), Expect = 2.034e-51 Identity = 130/438 (29.68%), Postives = 204/438 (46.58%), Query Frame = 0 Query: 113 HAPQRHNSSNSSVSSPSSQPGGFFVKSESNPPLTPNQAVQEYARLQENERKKKGPVPR--PQEELCTVCGDRASGYHYNALACEGCKGFFRRSITK--NSSYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQCQKKRAIKQAQKAAQNGDASSTTLMANNSSLSGGMGGRGTPLAIGGPGLSS-NHNSIPSALAPRHLKPEEEELINRIVYYQDEFENPTAEDLNRVYHVPLHPVNNDATGNESESDRLFQHMTEMTILTVQLIVEFTKHLPGFPTLCREDQVSLLKGCSSEVMMLRGARRYDPQRDSIIYATNYPFSKDNYVKAGLG--NDALFRFCRNMCKMKVDNAEYALITAIVIF-SERHNVKEPKRVEKIQEIYVEALQSYVMAKQKKEPMVAFA-KLLSVLTELRSLGNNNAKTCFNLRM 541 H +R N SS Q +P +Q+V Q E+K KG +P ++ELC VCGD+A+GYHY + CEGCKGFFRR+I K + SYSCKY C ID R +CQ CR KKC VGM + V+ +S+ KR + L +G + P + + + + H K + + L ED+ + P+ N G + + + F H T++ + +V+F K LP F L EDQ+ LLKGC E+M LR A RYDP +++ ++ GLG +DA+F ++ +D+ E AL+ A+++ S+R + +R+EK Q+ ++ A + Y+ +K + F KLL +T+LR +G +A ++++ Sbjct: 42 HVERRGALKNEQTSSHLIQATWASSIFHLDPDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKSLHPSYSCKYEGKCIIDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKL-----------IEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWKQKRKFL---------------PEDIGQA------PIVNAPEGGQVDLEA-FSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPDSETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYI--NYRKHHVTHFWPKLLMKVTDLRMIGACHASRFLHMKV 444
BLAST of ecdysone receptor vs. SwissProt
Match: gi|586093|sp|P37242.1|THB_MOUSE (RecName: Full=Thyroid hormone receptor beta; AltName: Full=Nuclear receptor subfamily 1 group A member 2; AltName: Full=c-erbA-2; AltName: Full=c-erbA-beta) HSP 1 Score: 183.341 bits (464), Expect = 1.454e-50 Identity = 123/409 (30.07%), Postives = 197/409 (48.17%), Query Frame = 0 Query: 142 NPPLTPNQAVQEYARLQENERKKKGPVPR--PQEELCTVCGDRASGYHYNALACEGCKGFFRRSITK--NSSYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQCQKKRAIKQAQKAAQNGDASSTTLMANNSSLSGGMGGRGTPLAIGGPGLSS-NHNSIPSALAPRHLKPEEEELINRIVYYQDEFENPTAEDLNRVYHVPLHPVNNDATGNESESDRLFQHMTEMTILTVQLIVEFTKHLPGFPTLCREDQVSLLKGCSSEVMMLRGARRYDPQRDSIIYATNYPFSKDNYVKAGLG--NDALFRFCRNMCKMKVDNAEYALITAIVIF-SERHNVKEPKRVEKIQEIYVEALQSYVMAKQKKEPMVAFA-KLLSVLTELRSLGNNNAKTCFNLRM 541 +P +Q++ Q E+K KG +P ++ELC VCGD+A+GYHY + CEGCKGFFRR+I K + SYSCKY C ID R +CQ CR KKC VGM + V+ +S+ KR + L +G + P + + + + H K + + L ED+ + P+ N G + + + F H T++ + +V+F K LP F L EDQ+ LLKGC E+M LR A RYDP +++ ++ GLG +DA+F ++ +D+ E AL+ A+++ S+R + +R+EK Q+ ++ A + Y+ +K + F KLL +T+LR +G +A ++++ Sbjct: 71 DPDDVNDQSISSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKSLHPSYSCKYEGKCIIDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKL-----------IEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWKQKRKFL---------------PEDIGQA------PIVNAPEGGKVDLEA-FSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPDSETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYI--NYRKHHVTHFWPKLLMKVTDLRMIGACHASRFLHMKV 444
BLAST of ecdysone receptor vs. SwissProt
Match: gi|215273960|sp|Q9PVE4.2|THB_DANRE (RecName: Full=Thyroid hormone receptor beta; Short=TR-beta; Short=TRb; AltName: Full=Nuclear receptor subfamily 1 group A member 2; AltName: Full=Thyroid hormone receptor beta-1; Short=TRbeta1) HSP 1 Score: 181.8 bits (460), Expect = 1.632e-50 Identity = 119/395 (30.13%), Postives = 196/395 (49.62%), Query Frame = 0 Query: 159 ENERKKKGPVPR--PQEELCTVCGDRASGYHYNALACEGCKGFFRRSITKNS--SYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQ-CQKKRAIKQAQKAAQNGDASSTTLMANNSSLSGGMGGRGTPLAIGGPGLSSNH----NSIPSALAPRHLKPEEEELINRIVYYQDEFENPTAEDLNRVYHVPLHPVNNDATGNESESDRLFQHMTEMTILTVQLIVEFTKHLPGFPTLCREDQVSLLKGCSSEVMMLRGARRYDPQRDSIIYATNYPFSKDNYVKAGLG--NDALFRFCRNMCKMKVDNAEYALITAIVIF-SERHNVKEPKRVEKIQEIYVEALQSYVMAKQKKEPMVAFAKLLSVLTELRSLGNNNAKTCFNLRM 541 ++E + G +P ++ELC VCGD+A+GYHY + CEGCKGFFRR+I KN +Y+CKY C ID R +CQ CR KKC VGM + V+ +S+ K++ I++ ++ + + T + R A NH SA+ + KPE+ + P+ N GN+ + + F T++ + +V+F K LP F L EDQ+ LLKGC E+M LR A RYDP+ D++ ++ GLG +DA+F ++ +D++E AL+ A+++ S+R + +R+E+ QE ++ A + Y+ ++ K + KLL +T+LR +G +A ++++ Sbjct: 13 KDEAMQNGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLNPTYACKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEENRERRRREELQKTVWDRPEPTQEEWEMIRVVTEAHMATNAQGNHWKQKRKFLSAVGVKEAKPED---------------------------IGSAPIVNAPEGNKVDIEA-FSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESDTLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGVSLSSFNLDDSEVALLQAVILLSSDRPGLTSVERIERCQEEFLLAFEHYINYRKHKVAHF-WPKLLMKVTDLRMIGACHASRFLHMKV 378
BLAST of ecdysone receptor vs. SwissProt
Match: gi|1729929|sp|Q02965.2|THB_LITCT (RecName: Full=Thyroid hormone receptor beta; AltName: Full=Nuclear receptor subfamily 1 group A member 2) HSP 1 Score: 180.259 bits (456), Expect = 2.638e-50 Identity = 120/386 (31.09%), Postives = 187/386 (48.45%), Query Frame = 0 Query: 172 QEELCTVCGDRASGYHYNALACEGCKGFFRRSITKNS--SYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQCQKKRAIKQAQKAAQNGDASSTTLMANNSSLSGGMGGRGTPLAIGGPGLSSNHNSIPSALAPRHLKPEEEELINRIVY----------YQDEFENPTAEDLNRVYHVPLHPVNNDATGNESESDRLFQHMTEMTILTVQLIVEFTKHLPGFPTLCREDQVSLLKGCSSEVMMLRGARRYDPQRDSIIYATNYPFSKDNYVKAGLG--NDALFRFCRNMCKMKVDNAEYALITAIVIF-SERHNVKEPKRVEKIQEIYVEALQSYVMAKQKKEPMVAFA-KLLSVLTELRSLGNNNAKTCFNLRM 541 ++ELC VCGD+A+GYHY + CEGCKGFFRR+I KN SYSCKY C ID R +CQ CR KKC VGM + V+ +S+ KR + + + + D TL+ P+ PEE ELI + + + ED+ + P+ N G + + + F T++ + +V+F K LP F L EDQ+ LLKGC E+M LR A RYDP+ +++ ++ GLG +DA+F ++ +D+ E AL+ A+++ S+R + +R+EK QE ++ A + Y+ +K + F KLL +T+LR +G +A ++++ Sbjct: 15 KDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEENREKRRKDELQKTLVQKPE---------------------------PT--------PEEWELIQVVTEAHVATNAQGSHWKQKRKFLPEDIGQA------PIVNAPEGGKVDLEA-FSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGVSLSSFNLDDTEVALLQAVLLMSSDRPGLSSVERIEKCQEGFLLAFEHYI--NYRKHNVAHFWPKLLMKVTDLRMIGACHASRFLHMKV 356
BLAST of ecdysone receptor vs. nr
Match: gi|13677226|gb|AAC33432.2| (ecdysteroid receptor [Leptuca pugilator]) HSP 1 Score: 476.093 bits (1224), Expect = 3.489e-160 Identity = 249/439 (56.72%), Postives = 306/439 (69.70%), Query Frame = 0 Query: 124 SVSSPSSQPGGFFVKSESNPPLTPNQAVQEYARLQENERKKKGPVPRPQEELCTVCGDRASGYHYNALACEGCKGFFRRSITKNSSYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQCQKKRAIKQAQKAAQNGDASSTTLMANNSSLSGGMGGRGTPLAIGGPGLSSNHNSIPSALAPR-HLKP---EEEELINRIVYYQDEFENPTAEDLNRVYHVPLHPVNNDATGNESESDRLFQHMTEMTILTVQLIVEFTKHLPGFPTLCREDQVSLLKGCSSEVMMLRGARRYDPQRDSIIYATNYPFSKDNYVKAGLGNDA--LFRFCRNMCKMKVDNAEYALITAIVIFSERHNVKEPKRVEKIQEIYVEALQSYVMAKQKKEPMVAFAKLLSVLTELRSLGNNNAKTCFNLRMINRKLPAFLAEIWDI 556 +V+SPS S P N Y L +KKKGP+PR QEELC VCGDRASGYHYNAL CEGCKGFFRRSITKN+ Y CKYG+ CE+DMYMRRKCQ CRLKKC VGMR ECVVPESQCQ +K+ QK A++ D + +L G+P+A S + SA APR ++KP E+EELIN +VYYQ+EFE PT D+ ++ N D E SD F+H+TEMTILTVQLIVEF+K LPGF TL REDQ++LLK CSSEVMMLR ARRYD + DSI++ NYP+++ +Y AGLG A LFRFCR++CKMKVDNAEYAL+ AI IFSER N+KE K+VEK+QEIY+EAL+SYV ++ + FAKLL++LTELR+LGN N++ CF+L + N++LP FLAEIWD+ Sbjct: 109 AVASPSDTSSLSGRDDMSPPSSLSNFGADSYGDL----KKKKGPIPRQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQCKYGNNCEMDMYMRRKCQECRLKKCLNVGMRPECVVPESQCQ----VKREQKKARDKDKTYPSL--------------GSPIAEDKAAPISPVSKDMSA-APRLNVKPLTREQEELINTLVYYQEEFEQPTEADVKKIRF------NFDG---EDTSDMRFRHITEMTILTVQLIVEFSKQLPGFATLQREDQITLLKACSSEVMMLRAARRYDAKTDSIVFGNNYPYTQASYALAGLGESAEILFRFCRSLCKMKVDNAEYALLAAIAIFSERPNLKELKKVEKLQEIYLEALKSYVENRRLPRSNMVFAKLLNILTELRTLGNINSEMCFSLTLKNKRLPPFLAEIWDV 515
BLAST of ecdysone receptor vs. nr
Match: gi|817062771|ref|XP_012253055.1| (ecdysone receptor isoform X2 [Athalia rosae]) HSP 1 Score: 478.019 bits (1229), Expect = 5.680e-160 Identity = 247/426 (57.98%), Postives = 306/426 (71.83%), Query Frame = 0 Query: 145 LTPNQAVQEYARLQENERKKKGPVPRPQEELCTVCGDRASGYHYNALACEGCKGFFRRSITKNSSYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQCQKKRAIKQAQKAAQNGDASSTTLMANNSSLSG-GMGGRGTPL---------AIGGPGLSS--NHNSIPSALAPRHLKPEEEELINRIVYYQDEFENPTAEDLNRVYHVPLHPVNNDATGNESESDRLFQHMTEMTILTVQLIVEFTKHLPGFPTLCREDQVSLLKGCSSEVMMLRGARRYDPQRDSIIYATNYPFSKDNYVKAGLGN--DALFRFCRNMCKMKVDNAEYALITAIVIFSERHNVKEPKRVEKIQEIYVEALQSYVMAKQKKEPMVAFAKLLSVLTELRSLGNNNAKTCFNLRMINRKLPAFLAEIWDI 556 L+P ++ Y+ + +KKKGP PR QEELC VCGDRASGYHYNAL CEGCKGFFRRSITKN+ Y CKYG+ CEIDMYMRRKCQ CRLKKC TVGMR ECVVPE QC KR K+AQK + +STT+ + SLSG G G L +GG +S NHN + + + PE+EELI+R+VY+QDE+E P+ EDL R+ + P ND E SD F+H+TE++ILTVQLIVEF K LPGF L REDQ++LLK CSSEVMMLR ARRYD Q DSI++A N P+++DNY AG+G + L RFCR M MKVDNAEYAL+TAIVIF+ER + E +VEKIQEIY+EAL++YV +++ + + FAKLLSVLTELR+LGN N++ C +L++ N+KLP FLAEIWD+ Sbjct: 170 LSPPSSLNGYSADSCDAKKKKGPTPRQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQCKYGNNCEIDMYMRRKCQECRLKKCLTVGMRPECVVPEYQCAVKRKEKKAQK--EKDKPNSTTMNGSPGSLSGMGADQMGVKLEPAETETLTMLGGSSSTSIINHNGV------KPVSPEQEELIHRLVYFQDEYEQPSPEDLKRITNEP-----NDG---EDPSDFGFRHITEISILTVQLIVEFAKRLPGFDKLLREDQIALLKACSSEVMMLRMARRYDVQTDSIVFANNQPYTRDNYNIAGMGETIEDLLRFCRQMFTMKVDNAEYALLTAIVIFAERPALVEGWKVEKIQEIYLEALKAYVDNRRRPKSGMIFAKLLSVLTELRTLGNQNSEMCTSLKLKNKKLPPFLAEIWDL 579
BLAST of ecdysone receptor vs. nr
Match: gi|1241830579|gb|PBC26988.1| (Ecdysone receptor [Apis cerana cerana]) HSP 1 Score: 472.241 bits (1214), Expect = 1.382e-159 Identity = 243/406 (59.85%), Postives = 297/406 (73.15%), Query Frame = 0 Query: 162 RKKKGPVPRPQEELCTVCGDRASGYHYNALACEGCKGFFRRSITKNSSYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQCQKKRAIKQAQKAAQNGDASSTTLMANNSSLSGG-----MGGRGTPLAIGGPGLSSNHNSIPSALAP----RHLKPEEEELINRIVYYQDEFENPTAEDLNRVYHVPLHPVNNDATGNESESDRLFQHMTEMTILTVQLIVEFTKHLPGFPTLCREDQVSLLKGCSSEVMMLRGARRYDPQRDSIIYATNYPFSKDNYVKAGLGN--DALFRFCRNMCKMKVDNAEYALITAIVIFSERHNVKEPKRVEKIQEIYVEALQSYVMAKQKKEPMVAFAKLLSVLTELRSLGNNNAKTCFNLRMINRKLPAFLAEIWDI 556 RKKKGP PR QEELC VCGDRASGYHYNAL CEGCKGFFRRSITKN+ Y CKYG+ CEIDMYMRRKCQ CRLKKC TVGMR ECVVPE QC KR K+AQK + +STT+ N S SGG MG + P A +S + I + ++P + + PE+EELI+R+VY+Q+E+E P+ EDL R + N + E SD F+H+TE+TILTVQLIVEF+K LPGF L REDQ++LLK CSSEVMMLR AR+YD Q DSII+A N P++KD+Y AG+G + L FCR M MKV+NAEYAL+TAIVIFSER N+ E +VEKIQEIY+EAL++YV +++ P FA+LLSVLTELR+LGN N++ CF+L+ N+KLP FLAEIWD+ Sbjct: 58 RKKKGPTPRQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQCKYGNNCEIDMYMRRKCQECRLKKCLTVGMRPECVVPEYQCAVKRKEKKAQK--EKDKPNSTTM--NGSPGSGGIRSDQMGVKIEP-AEAESLSTSGSSGILTPVSPYGYVKPISPEQEELIHRLVYFQNEYEQPSEEDLKR--------ITNQPSEGEDISDYKFRHITEITILTVQLIVEFSKRLPGFDELMREDQIALLKACSSEVMMLRMARKYDVQTDSIIFANNQPYTKDSYTVAGMGETIEDLLHFCRQMYAMKVNNAEYALLTAIVIFSERPNLLEGWKVEKIQEIYLEALRAYVDNRRRPNPGTVFARLLSVLTELRTLGNQNSEMCFSLKFKNKKLPVFLAEIWDV 450
BLAST of ecdysone receptor vs. nr
Match: gi|755966424|ref|XP_011305494.1| (PREDICTED: ecdysone receptor isoform X2 [Fopius arisanus]) HSP 1 Score: 478.789 bits (1231), Expect = 1.506e-159 Identity = 258/519 (49.71%), Postives = 331/519 (63.78%), Query Frame = 0 Query: 62 PSSVLSPPMPNQPIYVDT-----SSPSSHFQASSPQITEIKTEP--PSSFSPPVNGYGHAPQRHNSSNSSVSSPSSQ-------PGGFFVKSESNPPLTPNQAVQEYARLQENERKKKGPVPRPQEELCTVCGDRASGYHYNALACEGCKGFFRRSITKNSSYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQCQKKRAIKQAQKAAQNGDASSTTLMANNSSLSGGMGGRGTPLAIGGPG----LSSNHNSIPSALAPRH----LKPEEEELINRIVYYQDEFENPTAEDLNRVYHVPLHPVNNDATGNESESDRLFQHMTEMTILTVQLIVEFTKHLPGFPTLCREDQVSLLKGCSSEVMMLRGARRYDPQRDSIIYATNYPFSKDNYVKAGLGN--DALFRFCRNMCKMKVDNAEYALITAIVIFSERHNVKEPKRVEKIQEIYVEALQSYVMAKQKKEPMVAFAKLLSVLTELRSLGNNNAKTCFNLRMINRKLPAFLAEIWDI 556 P L+P PN P + + ++P + P ++ +T P + P+ Q +SN+ SP S P G K + +PP ++ Y+ + +KKKGP PR QEELC VCGDRASGYHYNAL CEGCKGFFRRSITKN+ Y CKYG+ CEIDMYMRRKCQ CRLKKC +VGMR ECVVPE QC KR K+AQK + D ++T M + G + G GT P L N S S ++ + PE+ LI R+VY+Q +ENP+ EDL R+ H P T E SD F+HM E+TILTVQLIVEF K+L GF TL REDQ++LLK CSSEVMMLR AR+YD DSI++A N P+++D+Y AG+G+ + L RFCR+M MKV+NAEYAL+TAIVIFSER + E +VEKIQE+Y+EAL++YV +++K FAKLLSVLTELR+LGN N++ CF+L++ N+KLP FLAEIWD+ Sbjct: 137 PDDWLAPTSPNSPQTLSSQQLIYTTPQQQLDRTPPPVSTTQTPPLKQQALQQPITLSTGLAQGQQTSNNGYVSPMSSGSYDPYSPNGKIGKDDLSPP----SSLNGYSADSCDAKKKKGPTPRQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQCKYGNNCEIDMYMRRKCQECRLKKCLSVGMRPECVVPEYQCAVKRKEKKAQK---DKDKPNSTTMNGS---PGSISGMGTDQIKIEPSEVDCLPMNSGSTDSLTGIQNGLSVVNPEQAGLIQRLVYFQGRYENPSPEDLERITHRP--------TEGEDLSDVRFRHMAEITILTVQLIVEFAKNLSGFDTLLREDQIALLKACSSEVMMLRMARKYDAATDSILFADNQPYTRDSYSLAGMGDTIEDLLRFCRHMYNMKVNNAEYALVTAIVIFSERPQLLEGWKVEKIQEVYLEALKAYVDSRRKHRSGTVFAKLLSVLTELRTLGNQNSEICFSLKLKNKKLPPFLAEIWDV 637
BLAST of ecdysone receptor vs. nr
Match: gi|1080033219|ref|XP_018560874.1| (ecdysone receptor isoform X4 [Anoplophora glabripennis]) HSP 1 Score: 473.011 bits (1216), Expect = 1.801e-159 Identity = 243/448 (54.24%), Postives = 307/448 (68.53%), Query Frame = 0 Query: 112 GHAPQRHNSSNSSVSSPSSQPGGFFVKSESNPPLTPNQAVQEYARLQENERKKKGPVPRPQEELCTVCGDRASGYHYNALACEGCKGFFRRSITKNSSYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQCQKKRAIKQAQKAAQNGDASSTTLMANNSSLSGGMGGRGTPLAIG-GPGLSSNHNSIPSALAPRHLKPEEEELINRIVYYQDEFENPTAEDLNRVYHVPLHPVNNDATGNESESDRLFQHMTEMTILTVQLIVEFTKHLPGFPTLCREDQVSLLKGCSSEVMMLRGARRYDPQRDSIIYATNYPFSKDNYVKAGLGN--DALFRFCRNMCKMKVDNAEYALITAIVIFSERHNVKEPKRVEKIQEIYVEALQSYVMAKQKKEPMVAFAKLLSVLTELRSLGNNNAKTCFNLRMINRKLPAFLAEIWDI 556 G+ Q H +S + S + + +PP + N Y+ + +KKKGP PR QEELC VCGDRASGYHYNAL CEGCKGFFRRSITKN+ Y CKYG+ CEIDMYMRRKCQ CRLKKC +VGMR ECVVPE QC KR K+AQK + +STT G+P I P LS + ++ + + P + PE+EELI+R+VY+Q+E+E+P+ ED+ R+ + P+ E + D F+H+TE+TILTVQLIVEF K LPGF L REDQ++LLK CSSEVMM R ARRYD Q DSI++ N P+S+D+Y AG+G + L FCR M MKVDNAEYAL+TAIVIFSER + E +VEKIQEIY+EAL++YV ++K P FAKLLSVLTELR+LGN N++ CF+L++ N+KLP FLAEIWD+ Sbjct: 64 GYVIQGHTVIGNSAAIAKSDTSSMSGREDLSPPSSLNG----YSADSCDAKKKKGPTPRQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQCKYGNNCEIDMYMRRKCQECRLKKCLSVGMRPECVVPEVQCAVKRKEKKAQK--EKDKPNSTT--------------NGSPEMIKLEPELSDSEKTLTNGVKP--ISPEQEELIHRLVYFQNEYEHPSEEDVKRIINQPME--------GEDQCDIRFRHITEITILTVQLIVEFAKRLPGFDKLLREDQIALLKACSSEVMMFRMARRYDVQSDSILFVNNQPYSRDSYNLAGMGETIEDLLHFCRTMYSMKVDNAEYALLTAIVIFSERPALIEGWKVEKIQEIYLEALRAYVDNRRKPRPGTIFAKLLSVLTELRTLGNQNSEMCFSLKLKNKKLPPFLAEIWDV 481 The following BLAST results are available for this feature:
BLAST of ecdysone receptor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 23
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BLAST of ecdysone receptor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of ecdysone receptor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold106_size358372:1574..3247- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold106_size358372-processed-gene-0.6 ID=snap_masked-scaffold106_size358372-processed-gene-0.6|Name=ecdysone receptor|organism=Tigriopus kingsejongensis|type=gene|length=1674bp|location=Sequence derived from alignment at scaffold106_size358372:1574..3247- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'ecdysone receptor' has the following synonyms
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