ecdysone receptor, snap_masked-scaffold106_size358372-processed-gene-0.6 (gene) Tigriopus kingsejongensis

Overview
Nameecdysone receptor
Unique Namesnap_masked-scaffold106_size358372-processed-gene-0.6
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of ecdysone receptor vs. L. salmonis genes
Match: EMLSAG00000008261 (supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 gene:EMLSAG00000008261 transcript:EMLSAT00000008261 description:"maker-LSalAtl2s49-augustus-gene-8.3")

HSP 1 Score: 70.0922 bits (170), Expect = 4.812e-13
Identity = 32/86 (37.21%), Postives = 44/86 (51.16%), Query Frame = 0
Query:  163 KKKGPVPRPQEELCTVCGDRASGY-HYNALACEGCKGFFRRSITKNSSYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVV 247
            KK+    R     C +C D A+ + HY A+AC  C+ FFRR++  N+ Y C     C I    R+ CQ CR  KC   GM+   V+
Sbjct:   52 KKRAKFIRKVT--CHICSDTANDHIHYGAIACXSCRAFFRRAVICNAEYHCSRDKTCFITKETRKHCQFCRFNKCLEAGMKNTWVM 135          
BLAST of ecdysone receptor vs. L. salmonis genes
Match: EMLSAG00000004174 (supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5")

HSP 1 Score: 61.6178 bits (148), Expect = 2.460e-10
Identity = 32/89 (35.96%), Postives = 46/89 (51.69%), Query Frame = 0
Query:  161 ERKKKGPVPRPQEELCTVCGDRASGY-HYNALACEGCKGFFRRSITKNSS--YSCKYGD-----GCEIDMYMRRKCQACRLKKCYTVGM 241
            E KK+   P P  ++C +CGD A  + HY A+AC  C+ FF R++ K +   + C  G+      C I    R  CQ CR + C + GM
Sbjct:  122 EPKKRKRRPEPMTDVCRICGDIAPPHNHYGAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKATRTHCQFCRYRGCLSAGM 210          
BLAST of ecdysone receptor vs. L. salmonis genes
Match: EMLSAG00000005762 (supercontig:LSalAtl2s:LSalAtl2s30:319005:362333:1 gene:EMLSAG00000005762 transcript:EMLSAT00000005762 description:"maker-LSalAtl2s30-augustus-gene-3.10")

HSP 1 Score: 51.6026 bits (122), Expect = 1.312e-7
Identity = 21/56 (37.50%), Postives = 38/56 (67.86%), Query Frame = 0
Query:  371 MTEMTILTVQLIVEFTKHLPGFPTLCREDQVSLLKGCSSEVMMLRGARRYDPQRDS 426
            +  +T L  + I++ T+ +  F +LC+ED+++LLKG  SE+MMLR  + +D  ++S
Sbjct:   48 LINLTDLAXKRIIKMTRGIVAFNSLCQEDRIALLKGGCSELMMLRSIKNFDADKNS 103          
BLAST of ecdysone receptor vs. SwissProt
Match: gi|586092|sp|P10828.2|THB_HUMAN (RecName: Full=Thyroid hormone receptor beta; AltName: Full=Nuclear receptor subfamily 1 group A member 2; AltName: Full=c-erbA-2; AltName: Full=c-erbA-beta)

HSP 1 Score: 185.652 bits (470), Expect = 2.034e-51
Identity = 124/403 (30.77%), Postives = 196/403 (48.64%), Query Frame = 0
Query:  148 NQAVQEYARLQENERKKKGPVPR--PQEELCTVCGDRASGYHYNALACEGCKGFFRRSITKNS--SYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQCQKKRAIKQAQKAAQNGDASSTTLMANNSSLSGGMGGRGTPLAIGGPGLSS-NHNSIPSALAPRHLKPEEEELINRIVYYQDEFENPTAEDLNRVYHVPLHPVNNDATGNESESDRLFQHMTEMTILTVQLIVEFTKHLPGFPTLCREDQVSLLKGCSSEVMMLRGARRYDPQRDSIIYATNYPFSKDNYVKAGLG--NDALFRFCRNMCKMKVDNAEYALITAIVIF-SERHNVKEPKRVEKIQEIYVEALQSYVMAKQKKEPMVAFA-KLLSVLTELRSLGNNNAKTCFNLRM 541
            +Q+V      Q  E+K KG +P    ++ELC VCGD+A+GYHY  + CEGCKGFFRR+I KN   SYSCKY   C ID   R +CQ CR KKC  VGM  + V+ +S+   KR +                       L   +G +  P       + +     + +     H K + + L                ED+ +       P+ N   G + + +  F H T++    +  +V+F K LP F  L  EDQ+ LLKGC  E+M LR A RYDP+ +++        ++      GLG  +DA+F    ++    +D+ E AL+ A+++  S+R  +   +R+EK Q+ ++ A + Y+    +K  +  F  KLL  +T+LR +G  +A    ++++
Sbjct:   77 DQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKL-----------IEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWKQKRKFL---------------PEDIGQA------PIVNAPEGGKVDLEA-FSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYI--NYRKHHVTHFWPKLLMKVTDLRMIGACHASRFLHMKV 444          
BLAST of ecdysone receptor vs. SwissProt
Match: gi|586094|sp|P18113.2|THB_RAT (RecName: Full=Thyroid hormone receptor beta; AltName: Full=Nuclear receptor subfamily 1 group A member 2; AltName: Full=c-erbA-2; AltName: Full=c-erbA-beta)

HSP 1 Score: 185.652 bits (470), Expect = 2.034e-51
Identity = 130/438 (29.68%), Postives = 204/438 (46.58%), Query Frame = 0
Query:  113 HAPQRHNSSNSSVSSPSSQPGGFFVKSESNPPLTPNQAVQEYARLQENERKKKGPVPR--PQEELCTVCGDRASGYHYNALACEGCKGFFRRSITK--NSSYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQCQKKRAIKQAQKAAQNGDASSTTLMANNSSLSGGMGGRGTPLAIGGPGLSS-NHNSIPSALAPRHLKPEEEELINRIVYYQDEFENPTAEDLNRVYHVPLHPVNNDATGNESESDRLFQHMTEMTILTVQLIVEFTKHLPGFPTLCREDQVSLLKGCSSEVMMLRGARRYDPQRDSIIYATNYPFSKDNYVKAGLG--NDALFRFCRNMCKMKVDNAEYALITAIVIF-SERHNVKEPKRVEKIQEIYVEALQSYVMAKQKKEPMVAFA-KLLSVLTELRSLGNNNAKTCFNLRM 541
            H  +R    N   SS   Q          +P    +Q+V      Q  E+K KG +P    ++ELC VCGD+A+GYHY  + CEGCKGFFRR+I K  + SYSCKY   C ID   R +CQ CR KKC  VGM  + V+ +S+   KR +                       L   +G +  P       + +     + +     H K + + L                ED+ +       P+ N   G + + +  F H T++    +  +V+F K LP F  L  EDQ+ LLKGC  E+M LR A RYDP  +++        ++      GLG  +DA+F    ++    +D+ E AL+ A+++  S+R  +   +R+EK Q+ ++ A + Y+    +K  +  F  KLL  +T+LR +G  +A    ++++
Sbjct:   42 HVERRGALKNEQTSSHLIQATWASSIFHLDPDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKSLHPSYSCKYEGKCIIDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKL-----------IEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWKQKRKFL---------------PEDIGQA------PIVNAPEGGQVDLEA-FSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPDSETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYI--NYRKHHVTHFWPKLLMKVTDLRMIGACHASRFLHMKV 444          
BLAST of ecdysone receptor vs. SwissProt
Match: gi|586093|sp|P37242.1|THB_MOUSE (RecName: Full=Thyroid hormone receptor beta; AltName: Full=Nuclear receptor subfamily 1 group A member 2; AltName: Full=c-erbA-2; AltName: Full=c-erbA-beta)

HSP 1 Score: 183.341 bits (464), Expect = 1.454e-50
Identity = 123/409 (30.07%), Postives = 197/409 (48.17%), Query Frame = 0
Query:  142 NPPLTPNQAVQEYARLQENERKKKGPVPR--PQEELCTVCGDRASGYHYNALACEGCKGFFRRSITK--NSSYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQCQKKRAIKQAQKAAQNGDASSTTLMANNSSLSGGMGGRGTPLAIGGPGLSS-NHNSIPSALAPRHLKPEEEELINRIVYYQDEFENPTAEDLNRVYHVPLHPVNNDATGNESESDRLFQHMTEMTILTVQLIVEFTKHLPGFPTLCREDQVSLLKGCSSEVMMLRGARRYDPQRDSIIYATNYPFSKDNYVKAGLG--NDALFRFCRNMCKMKVDNAEYALITAIVIF-SERHNVKEPKRVEKIQEIYVEALQSYVMAKQKKEPMVAFA-KLLSVLTELRSLGNNNAKTCFNLRM 541
            +P    +Q++      Q  E+K KG +P    ++ELC VCGD+A+GYHY  + CEGCKGFFRR+I K  + SYSCKY   C ID   R +CQ CR KKC  VGM  + V+ +S+   KR +                       L   +G +  P       + +     + +     H K + + L                ED+ +       P+ N   G + + +  F H T++    +  +V+F K LP F  L  EDQ+ LLKGC  E+M LR A RYDP  +++        ++      GLG  +DA+F    ++    +D+ E AL+ A+++  S+R  +   +R+EK Q+ ++ A + Y+    +K  +  F  KLL  +T+LR +G  +A    ++++
Sbjct:   71 DPDDVNDQSISSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKSLHPSYSCKYEGKCIIDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKL-----------IEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWKQKRKFL---------------PEDIGQA------PIVNAPEGGKVDLEA-FSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPDSETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYI--NYRKHHVTHFWPKLLMKVTDLRMIGACHASRFLHMKV 444          
BLAST of ecdysone receptor vs. SwissProt
Match: gi|215273960|sp|Q9PVE4.2|THB_DANRE (RecName: Full=Thyroid hormone receptor beta; Short=TR-beta; Short=TRb; AltName: Full=Nuclear receptor subfamily 1 group A member 2; AltName: Full=Thyroid hormone receptor beta-1; Short=TRbeta1)

HSP 1 Score: 181.8 bits (460), Expect = 1.632e-50
Identity = 119/395 (30.13%), Postives = 196/395 (49.62%), Query Frame = 0
Query:  159 ENERKKKGPVPR--PQEELCTVCGDRASGYHYNALACEGCKGFFRRSITKNS--SYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQ-CQKKRAIKQAQKAAQNGDASSTTLMANNSSLSGGMGGRGTPLAIGGPGLSSNH----NSIPSALAPRHLKPEEEELINRIVYYQDEFENPTAEDLNRVYHVPLHPVNNDATGNESESDRLFQHMTEMTILTVQLIVEFTKHLPGFPTLCREDQVSLLKGCSSEVMMLRGARRYDPQRDSIIYATNYPFSKDNYVKAGLG--NDALFRFCRNMCKMKVDNAEYALITAIVIF-SERHNVKEPKRVEKIQEIYVEALQSYVMAKQKKEPMVAFAKLLSVLTELRSLGNNNAKTCFNLRM 541
            ++E  + G +P    ++ELC VCGD+A+GYHY  + CEGCKGFFRR+I KN   +Y+CKY   C ID   R +CQ CR KKC  VGM  + V+ +S+   K++ I++ ++  +  +   T       +       R    A        NH        SA+  +  KPE+                           +   P+ N   GN+ + +  F   T++    +  +V+F K LP F  L  EDQ+ LLKGC  E+M LR A RYDP+ D++        ++      GLG  +DA+F    ++    +D++E AL+ A+++  S+R  +   +R+E+ QE ++ A + Y+  ++ K     + KLL  +T+LR +G  +A    ++++
Sbjct:   13 KDEAMQNGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLNPTYACKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEENRERRRREELQKTVWDRPEPTQEEWEMIRVVTEAHMATNAQGNHWKQKRKFLSAVGVKEAKPED---------------------------IGSAPIVNAPEGNKVDIEA-FSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESDTLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGVSLSSFNLDDSEVALLQAVILLSSDRPGLTSVERIERCQEEFLLAFEHYINYRKHKVAHF-WPKLLMKVTDLRMIGACHASRFLHMKV 378          
BLAST of ecdysone receptor vs. SwissProt
Match: gi|1729929|sp|Q02965.2|THB_LITCT (RecName: Full=Thyroid hormone receptor beta; AltName: Full=Nuclear receptor subfamily 1 group A member 2)

HSP 1 Score: 180.259 bits (456), Expect = 2.638e-50
Identity = 120/386 (31.09%), Postives = 187/386 (48.45%), Query Frame = 0
Query:  172 QEELCTVCGDRASGYHYNALACEGCKGFFRRSITKNS--SYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQCQKKRAIKQAQKAAQNGDASSTTLMANNSSLSGGMGGRGTPLAIGGPGLSSNHNSIPSALAPRHLKPEEEELINRIVY----------YQDEFENPTAEDLNRVYHVPLHPVNNDATGNESESDRLFQHMTEMTILTVQLIVEFTKHLPGFPTLCREDQVSLLKGCSSEVMMLRGARRYDPQRDSIIYATNYPFSKDNYVKAGLG--NDALFRFCRNMCKMKVDNAEYALITAIVIF-SERHNVKEPKRVEKIQEIYVEALQSYVMAKQKKEPMVAFA-KLLSVLTELRSLGNNNAKTCFNLRM 541
            ++ELC VCGD+A+GYHY  + CEGCKGFFRR+I KN   SYSCKY   C ID   R +CQ CR KKC  VGM  + V+ +S+   KR + +  +  +  D    TL+                               P+        PEE ELI  +            +  +      ED+ +       P+ N   G + + +  F   T++    +  +V+F K LP F  L  EDQ+ LLKGC  E+M LR A RYDP+ +++        ++      GLG  +DA+F    ++    +D+ E AL+ A+++  S+R  +   +R+EK QE ++ A + Y+    +K  +  F  KLL  +T+LR +G  +A    ++++
Sbjct:   15 KDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEENREKRRKDELQKTLVQKPE---------------------------PT--------PEEWELIQVVTEAHVATNAQGSHWKQKRKFLPEDIGQA------PIVNAPEGGKVDLEA-FSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGVSLSSFNLDDTEVALLQAVLLMSSDRPGLSSVERIEKCQEGFLLAFEHYI--NYRKHNVAHFWPKLLMKVTDLRMIGACHASRFLHMKV 356          
BLAST of ecdysone receptor vs. nr
Match: gi|13677226|gb|AAC33432.2| (ecdysteroid receptor [Leptuca pugilator])

HSP 1 Score: 476.093 bits (1224), Expect = 3.489e-160
Identity = 249/439 (56.72%), Postives = 306/439 (69.70%), Query Frame = 0
Query:  124 SVSSPSSQPGGFFVKSESNPPLTPNQAVQEYARLQENERKKKGPVPRPQEELCTVCGDRASGYHYNALACEGCKGFFRRSITKNSSYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQCQKKRAIKQAQKAAQNGDASSTTLMANNSSLSGGMGGRGTPLAIGGPGLSSNHNSIPSALAPR-HLKP---EEEELINRIVYYQDEFENPTAEDLNRVYHVPLHPVNNDATGNESESDRLFQHMTEMTILTVQLIVEFTKHLPGFPTLCREDQVSLLKGCSSEVMMLRGARRYDPQRDSIIYATNYPFSKDNYVKAGLGNDA--LFRFCRNMCKMKVDNAEYALITAIVIFSERHNVKEPKRVEKIQEIYVEALQSYVMAKQKKEPMVAFAKLLSVLTELRSLGNNNAKTCFNLRMINRKLPAFLAEIWDI 556
            +V+SPS           S P    N     Y  L    +KKKGP+PR QEELC VCGDRASGYHYNAL CEGCKGFFRRSITKN+ Y CKYG+ CE+DMYMRRKCQ CRLKKC  VGMR ECVVPESQCQ    +K+ QK A++ D +  +L              G+P+A       S  +   SA APR ++KP   E+EELIN +VYYQ+EFE PT  D+ ++        N D    E  SD  F+H+TEMTILTVQLIVEF+K LPGF TL REDQ++LLK CSSEVMMLR ARRYD + DSI++  NYP+++ +Y  AGLG  A  LFRFCR++CKMKVDNAEYAL+ AI IFSER N+KE K+VEK+QEIY+EAL+SYV  ++     + FAKLL++LTELR+LGN N++ CF+L + N++LP FLAEIWD+
Sbjct:  109 AVASPSDTSSLSGRDDMSPPSSLSNFGADSYGDL----KKKKGPIPRQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQCKYGNNCEMDMYMRRKCQECRLKKCLNVGMRPECVVPESQCQ----VKREQKKARDKDKTYPSL--------------GSPIAEDKAAPISPVSKDMSA-APRLNVKPLTREQEELINTLVYYQEEFEQPTEADVKKIRF------NFDG---EDTSDMRFRHITEMTILTVQLIVEFSKQLPGFATLQREDQITLLKACSSEVMMLRAARRYDAKTDSIVFGNNYPYTQASYALAGLGESAEILFRFCRSLCKMKVDNAEYALLAAIAIFSERPNLKELKKVEKLQEIYLEALKSYVENRRLPRSNMVFAKLLNILTELRTLGNINSEMCFSLTLKNKRLPPFLAEIWDV 515          
BLAST of ecdysone receptor vs. nr
Match: gi|817062771|ref|XP_012253055.1| (ecdysone receptor isoform X2 [Athalia rosae])

HSP 1 Score: 478.019 bits (1229), Expect = 5.680e-160
Identity = 247/426 (57.98%), Postives = 306/426 (71.83%), Query Frame = 0
Query:  145 LTPNQAVQEYARLQENERKKKGPVPRPQEELCTVCGDRASGYHYNALACEGCKGFFRRSITKNSSYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQCQKKRAIKQAQKAAQNGDASSTTLMANNSSLSG-GMGGRGTPL---------AIGGPGLSS--NHNSIPSALAPRHLKPEEEELINRIVYYQDEFENPTAEDLNRVYHVPLHPVNNDATGNESESDRLFQHMTEMTILTVQLIVEFTKHLPGFPTLCREDQVSLLKGCSSEVMMLRGARRYDPQRDSIIYATNYPFSKDNYVKAGLGN--DALFRFCRNMCKMKVDNAEYALITAIVIFSERHNVKEPKRVEKIQEIYVEALQSYVMAKQKKEPMVAFAKLLSVLTELRSLGNNNAKTCFNLRMINRKLPAFLAEIWDI 556
            L+P  ++  Y+    + +KKKGP PR QEELC VCGDRASGYHYNAL CEGCKGFFRRSITKN+ Y CKYG+ CEIDMYMRRKCQ CRLKKC TVGMR ECVVPE QC  KR  K+AQK  +    +STT+  +  SLSG G    G  L          +GG   +S  NHN +      + + PE+EELI+R+VY+QDE+E P+ EDL R+ + P     ND    E  SD  F+H+TE++ILTVQLIVEF K LPGF  L REDQ++LLK CSSEVMMLR ARRYD Q DSI++A N P+++DNY  AG+G   + L RFCR M  MKVDNAEYAL+TAIVIF+ER  + E  +VEKIQEIY+EAL++YV  +++ +  + FAKLLSVLTELR+LGN N++ C +L++ N+KLP FLAEIWD+
Sbjct:  170 LSPPSSLNGYSADSCDAKKKKGPTPRQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQCKYGNNCEIDMYMRRKCQECRLKKCLTVGMRPECVVPEYQCAVKRKEKKAQK--EKDKPNSTTMNGSPGSLSGMGADQMGVKLEPAETETLTMLGGSSSTSIINHNGV------KPVSPEQEELIHRLVYFQDEYEQPSPEDLKRITNEP-----NDG---EDPSDFGFRHITEISILTVQLIVEFAKRLPGFDKLLREDQIALLKACSSEVMMLRMARRYDVQTDSIVFANNQPYTRDNYNIAGMGETIEDLLRFCRQMFTMKVDNAEYALLTAIVIFAERPALVEGWKVEKIQEIYLEALKAYVDNRRRPKSGMIFAKLLSVLTELRTLGNQNSEMCTSLKLKNKKLPPFLAEIWDL 579          
BLAST of ecdysone receptor vs. nr
Match: gi|1241830579|gb|PBC26988.1| (Ecdysone receptor [Apis cerana cerana])

HSP 1 Score: 472.241 bits (1214), Expect = 1.382e-159
Identity = 243/406 (59.85%), Postives = 297/406 (73.15%), Query Frame = 0
Query:  162 RKKKGPVPRPQEELCTVCGDRASGYHYNALACEGCKGFFRRSITKNSSYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQCQKKRAIKQAQKAAQNGDASSTTLMANNSSLSGG-----MGGRGTPLAIGGPGLSSNHNSIPSALAP----RHLKPEEEELINRIVYYQDEFENPTAEDLNRVYHVPLHPVNNDATGNESESDRLFQHMTEMTILTVQLIVEFTKHLPGFPTLCREDQVSLLKGCSSEVMMLRGARRYDPQRDSIIYATNYPFSKDNYVKAGLGN--DALFRFCRNMCKMKVDNAEYALITAIVIFSERHNVKEPKRVEKIQEIYVEALQSYVMAKQKKEPMVAFAKLLSVLTELRSLGNNNAKTCFNLRMINRKLPAFLAEIWDI 556
            RKKKGP PR QEELC VCGDRASGYHYNAL CEGCKGFFRRSITKN+ Y CKYG+ CEIDMYMRRKCQ CRLKKC TVGMR ECVVPE QC  KR  K+AQK  +    +STT+  N S  SGG     MG +  P A      +S  + I + ++P    + + PE+EELI+R+VY+Q+E+E P+ EDL R        + N  +  E  SD  F+H+TE+TILTVQLIVEF+K LPGF  L REDQ++LLK CSSEVMMLR AR+YD Q DSII+A N P++KD+Y  AG+G   + L  FCR M  MKV+NAEYAL+TAIVIFSER N+ E  +VEKIQEIY+EAL++YV  +++  P   FA+LLSVLTELR+LGN N++ CF+L+  N+KLP FLAEIWD+
Sbjct:   58 RKKKGPTPRQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQCKYGNNCEIDMYMRRKCQECRLKKCLTVGMRPECVVPEYQCAVKRKEKKAQK--EKDKPNSTTM--NGSPGSGGIRSDQMGVKIEP-AEAESLSTSGSSGILTPVSPYGYVKPISPEQEELIHRLVYFQNEYEQPSEEDLKR--------ITNQPSEGEDISDYKFRHITEITILTVQLIVEFSKRLPGFDELMREDQIALLKACSSEVMMLRMARKYDVQTDSIIFANNQPYTKDSYTVAGMGETIEDLLHFCRQMYAMKVNNAEYALLTAIVIFSERPNLLEGWKVEKIQEIYLEALRAYVDNRRRPNPGTVFARLLSVLTELRTLGNQNSEMCFSLKFKNKKLPVFLAEIWDV 450          
BLAST of ecdysone receptor vs. nr
Match: gi|755966424|ref|XP_011305494.1| (PREDICTED: ecdysone receptor isoform X2 [Fopius arisanus])

HSP 1 Score: 478.789 bits (1231), Expect = 1.506e-159
Identity = 258/519 (49.71%), Postives = 331/519 (63.78%), Query Frame = 0
Query:   62 PSSVLSPPMPNQPIYVDT-----SSPSSHFQASSPQITEIKTEP--PSSFSPPVNGYGHAPQRHNSSNSSVSSPSSQ-------PGGFFVKSESNPPLTPNQAVQEYARLQENERKKKGPVPRPQEELCTVCGDRASGYHYNALACEGCKGFFRRSITKNSSYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQCQKKRAIKQAQKAAQNGDASSTTLMANNSSLSGGMGGRGTPLAIGGPG----LSSNHNSIPSALAPRH----LKPEEEELINRIVYYQDEFENPTAEDLNRVYHVPLHPVNNDATGNESESDRLFQHMTEMTILTVQLIVEFTKHLPGFPTLCREDQVSLLKGCSSEVMMLRGARRYDPQRDSIIYATNYPFSKDNYVKAGLGN--DALFRFCRNMCKMKVDNAEYALITAIVIFSERHNVKEPKRVEKIQEIYVEALQSYVMAKQKKEPMVAFAKLLSVLTELRSLGNNNAKTCFNLRMINRKLPAFLAEIWDI 556
            P   L+P  PN P  + +     ++P      + P ++  +T P    +   P+       Q   +SN+   SP S        P G   K + +PP     ++  Y+    + +KKKGP PR QEELC VCGDRASGYHYNAL CEGCKGFFRRSITKN+ Y CKYG+ CEIDMYMRRKCQ CRLKKC +VGMR ECVVPE QC  KR  K+AQK   + D  ++T M  +    G + G GT      P     L  N  S  S    ++    + PE+  LI R+VY+Q  +ENP+ EDL R+ H P        T  E  SD  F+HM E+TILTVQLIVEF K+L GF TL REDQ++LLK CSSEVMMLR AR+YD   DSI++A N P+++D+Y  AG+G+  + L RFCR+M  MKV+NAEYAL+TAIVIFSER  + E  +VEKIQE+Y+EAL++YV +++K      FAKLLSVLTELR+LGN N++ CF+L++ N+KLP FLAEIWD+
Sbjct:  137 PDDWLAPTSPNSPQTLSSQQLIYTTPQQQLDRTPPPVSTTQTPPLKQQALQQPITLSTGLAQGQQTSNNGYVSPMSSGSYDPYSPNGKIGKDDLSPP----SSLNGYSADSCDAKKKKGPTPRQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQCKYGNNCEIDMYMRRKCQECRLKKCLSVGMRPECVVPEYQCAVKRKEKKAQK---DKDKPNSTTMNGS---PGSISGMGTDQIKIEPSEVDCLPMNSGSTDSLTGIQNGLSVVNPEQAGLIQRLVYFQGRYENPSPEDLERITHRP--------TEGEDLSDVRFRHMAEITILTVQLIVEFAKNLSGFDTLLREDQIALLKACSSEVMMLRMARKYDAATDSILFADNQPYTRDSYSLAGMGDTIEDLLRFCRHMYNMKVNNAEYALVTAIVIFSERPQLLEGWKVEKIQEVYLEALKAYVDSRRKHRSGTVFAKLLSVLTELRTLGNQNSEICFSLKLKNKKLPPFLAEIWDV 637          
BLAST of ecdysone receptor vs. nr
Match: gi|1080033219|ref|XP_018560874.1| (ecdysone receptor isoform X4 [Anoplophora glabripennis])

HSP 1 Score: 473.011 bits (1216), Expect = 1.801e-159
Identity = 243/448 (54.24%), Postives = 307/448 (68.53%), Query Frame = 0
Query:  112 GHAPQRHNSSNSSVSSPSSQPGGFFVKSESNPPLTPNQAVQEYARLQENERKKKGPVPRPQEELCTVCGDRASGYHYNALACEGCKGFFRRSITKNSSYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPESQCQKKRAIKQAQKAAQNGDASSTTLMANNSSLSGGMGGRGTPLAIG-GPGLSSNHNSIPSALAPRHLKPEEEELINRIVYYQDEFENPTAEDLNRVYHVPLHPVNNDATGNESESDRLFQHMTEMTILTVQLIVEFTKHLPGFPTLCREDQVSLLKGCSSEVMMLRGARRYDPQRDSIIYATNYPFSKDNYVKAGLGN--DALFRFCRNMCKMKVDNAEYALITAIVIFSERHNVKEPKRVEKIQEIYVEALQSYVMAKQKKEPMVAFAKLLSVLTELRSLGNNNAKTCFNLRMINRKLPAFLAEIWDI 556
            G+  Q H    +S +   S       + + +PP + N     Y+    + +KKKGP PR QEELC VCGDRASGYHYNAL CEGCKGFFRRSITKN+ Y CKYG+ CEIDMYMRRKCQ CRLKKC +VGMR ECVVPE QC  KR  K+AQK  +    +STT               G+P  I   P LS +  ++ + + P  + PE+EELI+R+VY+Q+E+E+P+ ED+ R+ + P+          E + D  F+H+TE+TILTVQLIVEF K LPGF  L REDQ++LLK CSSEVMM R ARRYD Q DSI++  N P+S+D+Y  AG+G   + L  FCR M  MKVDNAEYAL+TAIVIFSER  + E  +VEKIQEIY+EAL++YV  ++K  P   FAKLLSVLTELR+LGN N++ CF+L++ N+KLP FLAEIWD+
Sbjct:   64 GYVIQGHTVIGNSAAIAKSDTSSMSGREDLSPPSSLNG----YSADSCDAKKKKGPTPRQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQCKYGNNCEIDMYMRRKCQECRLKKCLSVGMRPECVVPEVQCAVKRKEKKAQK--EKDKPNSTT--------------NGSPEMIKLEPELSDSEKTLTNGVKP--ISPEQEELIHRLVYFQNEYEHPSEEDVKRIINQPME--------GEDQCDIRFRHITEITILTVQLIVEFAKRLPGFDKLLREDQIALLKACSSEVMMFRMARRYDVQSDSILFVNNQPYSRDSYNLAGMGETIEDLLHFCRTMYSMKVDNAEYALLTAIVIFSERPALIEGWKVEKIQEIYLEALRAYVDNRRKPRPGTIFAKLLSVLTELRTLGNQNSEMCFSLKLKNKKLPPFLAEIWDV 481          
The following BLAST results are available for this feature:
BLAST of ecdysone receptor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 23
Match NameE-valueIdentityDescription
EMLSAG000000082614.812e-1337.21supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 ... [more]
EMLSAG000000041742.460e-1035.96supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-... [more]
EMLSAG000000057621.312e-737.50supercontig:LSalAtl2s:LSalAtl2s30:319005:362333:1 ... [more]

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BLAST of ecdysone receptor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|586092|sp|P10828.2|THB_HUMAN2.034e-5130.77RecName: Full=Thyroid hormone receptor beta; AltNa... [more]
gi|586094|sp|P18113.2|THB_RAT2.034e-5129.68RecName: Full=Thyroid hormone receptor beta; AltNa... [more]
gi|586093|sp|P37242.1|THB_MOUSE1.454e-5030.07RecName: Full=Thyroid hormone receptor beta; AltNa... [more]
gi|215273960|sp|Q9PVE4.2|THB_DANRE1.632e-5030.13RecName: Full=Thyroid hormone receptor beta; Short... [more]
gi|1729929|sp|Q02965.2|THB_LITCT2.638e-5031.09RecName: Full=Thyroid hormone receptor beta; AltNa... [more]

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BLAST of ecdysone receptor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|13677226|gb|AAC33432.2|3.489e-16056.72ecdysteroid receptor [Leptuca pugilator][more]
gi|817062771|ref|XP_012253055.1|5.680e-16057.98ecdysone receptor isoform X2 [Athalia rosae][more]
gi|1241830579|gb|PBC26988.1|1.382e-15959.85Ecdysone receptor [Apis cerana cerana][more]
gi|755966424|ref|XP_011305494.1|1.506e-15949.71PREDICTED: ecdysone receptor isoform X2 [Fopius ar... [more]
gi|1080033219|ref|XP_018560874.1|1.801e-15954.24ecdysone receptor isoform X4 [Anoplophora glabripe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold106_size358372supercontigscaffold106_size358372:1574..3247 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteP:steroid hormone mediated signaling pathway
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold106_size358372-processed-gene-0.6-mRNA-1snap_masked-scaffold106_size358372-processed-gene-0.6-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold106_size358372:1574..3247-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold106_size358372-processed-gene-0.6 ID=snap_masked-scaffold106_size358372-processed-gene-0.6|Name=ecdysone receptor|organism=Tigriopus kingsejongensis|type=gene|length=1674bp|location=Sequence derived from alignment at scaffold106_size358372:1574..3247- (Tigriopus kingsejongensis)
ATGTCTAGTAGTGCTCCACAAGTCACTCTCCTTCAGGCCAGGAGTCAAGT GAAGACCTACACCACCATGACTGGCGGGCCGCCATTCAACGGGGGAATCT CGACCATCATGGTGAACTCACCCCCGGGCCCGGGCTTATCGCCACCCTCG CCGCCCAATTTCTTTGGGCTCCAGCCCTCGCCACCCTCGAGTGTGCTCTC GCCCCCCATGCCCAACCAGCCCATATATGTGGACACGTCCTCGCCATCGT CCCATTTCCAGGCGTCCAGCCCCCAAATCACAGAAATTAAGACCGAGCCC CCCTCCTCCTTCAGCCCGCCAGTCAACGGCTACGGGCACGCCCCCCAGCG GCATAACAGCAGCAACTCCTCAGTGTCAAGTCCCAGTAGTCAGCCAGGCG GGTTCTTCGTGAAGAGCGAGTCCAACCCACCCCTGACGCCCAATCAGGCT GTGCAAGAGTATGCGCGGCTACAGGAGAACGAGCGAAAGAAGAAGGGCCC CGTCCCAAGGCCCCAAGAGGAGCTGTGCACTGTGTGCGGTGACCGGGCCT CCGGCTACCACTACAATGCCTTAGCCTGCGAGGGCTGTAAGGGCTTCTTT CGACGCTCCATCACCAAGAACTCCTCCTACTCGTGCAAGTACGGGGACGG CTGTGAAATTGACATGTACATGAGGCGCAAGTGTCAGGCCTGCCGCCTCA AGAAGTGCTACACCGTGGGGATGCGGGCCGAGTGTGTTGTCCCGGAGAGC CAATGTCAGAAGAAGCGGGCCATCAAGCAAGCTCAAAAAGCCGCCCAGAA CGGTGATGCCAGCTCCACCACACTTATGGCCAATAACAGCAGTCTTAGCG GGGGCATGGGAGGCCGTGGGACCCCTTTGGCCATCGGTGGCCCGGGCCTC TCGAGCAATCACAACAGCATTCCCTCAGCGCTCGCCCCGCGACACCTCAA GCCCGAGGAGGAGGAACTCATCAACCGCATCGTGTACTACCAGGATGAGT TCGAGAATCCCACCGCCGAGGACCTGAACCGCGTCTACCACGTGCCCCTC CATCCCGTCAACAACGACGCGACCGGCAACGAGAGCGAGTCGGATCGGTT GTTCCAACACATGACCGAGATGACCATCCTCACGGTCCAGCTCATTGTGG AGTTCACCAAGCACCTGCCCGGCTTCCCCACCCTGTGTCGGGAGGACCAA GTCAGCTTACTGAAGGGCTGCTCCAGTGAAGTGATGATGTTGCGAGGCGC CCGTCGCTACGACCCGCAGCGAGACAGTATTATCTATGCCACCAACTACC CGTTCTCAAAGGACAACTACGTGAAGGCGGGCCTGGGCAATGACGCCCTC TTCCGTTTCTGCCGGAACATGTGCAAGATGAAGGTGGACAATGCCGAGTA TGCCCTCATTACTGCCATTGTCATATTCAGTGAGAGGCACAACGTGAAAG AGCCCAAGCGAGTGGAGAAGATCCAGGAGATCTATGTCGAGGCCCTCCAG TCCTACGTGATGGCCAAGCAGAAGAAGGAGCCCATGGTGGCCTTCGCCAA GCTCCTGTCTGTCCTCACGGAACTGCGGTCCTTGGGCAATAACAATGCCA AGACCTGTTTCAACCTGAGGATGATCAACAGAAAGCTGCCGGCCTTCCTG GCAGAGATCTGGGACATCAAATGA
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Synonyms
The feature 'ecdysone receptor' has the following synonyms
Synonym
Tk03534
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