deoxyribose-phosphate aldolase, snap_masked-scaffold11553_size2001-processed-gene-0.1 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of deoxyribose-phosphate aldolase vs. L. salmonis genes
Match: EMLSAG00000008958 (supercontig:LSalAtl2s:LSalAtl2s558:51017:53161:-1 gene:EMLSAG00000008958 transcript:EMLSAT00000008958 description:"maker-LSalAtl2s558-augustus-gene-0.15") HSP 1 Score: 132.109 bits (331), Expect = 2.086e-38 Identity = 64/99 (64.65%), Postives = 76/99 (76.77%), Query Frame = 0
Query: 1 MAGADFIKTSTGKESVNATLPVTLVMIRAIRDYYDRTGYRVGYKPAGGISKAKDAITYLALIKEELSDRWLQPDLFRFGASSLLNDIERQLEHHVTGNY 99
MAG+DFIKTSTGKE VNA LPV +VM RAIRDY++RTG+ VG+KPAGGI ++DAI +L L+KEEL D WL +LFR GAS LL DIE L V G +
Sbjct: 333 MAGSDFIKTSTGKEGVNAILPVGIVMTRAIRDYHERTGFIVGFKPAGGIRTSEDAINWLILMKEELGDMWLCNNLFRIGASGLLTDIETNLYKLVKGCH 431
BLAST of deoxyribose-phosphate aldolase vs. SwissProt
Match: gi|24636805|sp|Q91YP3.1|DEOC_MOUSE (RecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase) HSP 1 Score: 160.614 bits (405), Expect = 6.598e-49 Identity = 72/108 (66.67%), Postives = 91/108 (84.26%), Query Frame = 0
Query: 1 MAGADFIKTSTGKESVNATLPVTLVMIRAIRDYYDRTGYRVGYKPAGGISKAKDAITYLALIKEELSDRWLQPDLFRFGASSLLNDIERQLEHHVTGNYSAGYRHPTS 108
MAG+DFIKTSTGKE+VNAT PV +VM+RAIRD++ +TG +VG+KPAGGI AK+++ +L+L+KEEL D WL PDLFR GASSLL+DIERQ+ HHVTG Y+A + P S
Sbjct: 211 MAGSDFIKTSTGKETVNATFPVAIVMLRAIRDFFWKTGNKVGFKPAGGIRTAKESLAWLSLVKEELGDEWLTPDLFRIGASSLLSDIERQIYHHVTGRYAAYHDLPMS 318
BLAST of deoxyribose-phosphate aldolase vs. SwissProt
Match: gi|24636817|sp|Q9Y315.2|DEOC_HUMAN (RecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase) HSP 1 Score: 159.458 bits (402), Expect = 1.706e-48 Identity = 70/108 (64.81%), Postives = 92/108 (85.19%), Query Frame = 0
Query: 1 MAGADFIKTSTGKESVNATLPVTLVMIRAIRDYYDRTGYRVGYKPAGGISKAKDAITYLALIKEELSDRWLQPDLFRFGASSLLNDIERQLEHHVTGNYSAGYRHPTS 108
MAG+DFIKTSTGKE+VNAT PV +VM+RAIRD++ +TG ++G+KPAGGI AKD++ +L+L+KEEL D WL+P+LFR GAS+LL+DIERQ+ HHVTG Y+A + P S
Sbjct: 211 MAGSDFIKTSTGKETVNATFPVAIVMLRAIRDFFWKTGNKIGFKPAGGIRSAKDSLAWLSLVKEELGDEWLKPELFRIGASTLLSDIERQIYHHVTGRYAAYHDLPMS 318
BLAST of deoxyribose-phosphate aldolase vs. SwissProt
Match: gi|122140411|sp|Q3T0V9.1|DEOC_BOVIN (RecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase) HSP 1 Score: 159.458 bits (402), Expect = 1.744e-48 Identity = 71/108 (65.74%), Postives = 91/108 (84.26%), Query Frame = 0
Query: 1 MAGADFIKTSTGKESVNATLPVTLVMIRAIRDYYDRTGYRVGYKPAGGISKAKDAITYLALIKEELSDRWLQPDLFRFGASSLLNDIERQLEHHVTGNYSAGYRHPTS 108
MAG+DFIKTSTGKE+VNAT PV +VM+RAIRD++ +TG +VG+KPAGGI AKD++ +L+LIKEEL D W++P+LFR GAS+LL DIERQ+ HHVTG Y+A + P S
Sbjct: 211 MAGSDFIKTSTGKETVNATFPVAIVMLRAIRDFFWKTGNKVGFKPAGGIRSAKDSLVWLSLIKEELGDEWMKPELFRIGASTLLADIERQIYHHVTGRYAAYHDLPMS 318
BLAST of deoxyribose-phosphate aldolase vs. SwissProt
Match: gi|3913457|sp|Q19264.1|DEOC_CAEEL (RecName: Full=Putative deoxyribose-phosphate aldolase; Short=DERA; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase) HSP 1 Score: 115.546 bits (288), Expect = 1.291e-31 Identity = 54/91 (59.34%), Postives = 70/91 (76.92%), Query Frame = 0
Query: 1 MAGADFIKTSTGKESVNATLPVTLVMIRAIRDYYDRTGYRVGYKPAGGISKAKDAITYLALIKEELSDRWLQPDLFRFGASSLLNDIERQL 91
+AG+DFIKTSTGKESVNATL V VM AI+ +++ TG +VG+KPAGGI +A++Y+AL+K+ L D WL P LFR GASSLL+D + L
Sbjct: 213 LAGSDFIKTSTGKESVNATLEVAYVMCTAIKRWHELTGKKVGFKPAGGIKTVDEALSYVALVKDILGDEWLNPHLFRIGASSLLDDCLKGL 303
BLAST of deoxyribose-phosphate aldolase vs. SwissProt
Match: gi|24636797|sp|Q8UJ09.1|DEOC_AGRFC (RecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase) HSP 1 Score: 90.5077 bits (223), Expect = 2.448e-22 Identity = 47/101 (46.53%), Postives = 63/101 (62.38%), Query Frame = 0
Query: 3 GADFIKTSTGKESVNATLPVTLVMIRAIRDYYDRTGYRVGYKPAGGISKAKDAITYLALIKEELSDRWLQPDLFRFGASSLLNDIERQLEHHVTGNYSAGY 103
GADFIKTSTGK +VNATL +M++AIRD + +VG+KPAGGI +DA YL L + ++ W P FRFGAS +L+D+ L ++GY
Sbjct: 163 GADFIKTSTGKVAVNATLEAADIMLQAIRD----SKKKVGFKPAGGIGTVEDATLYLRLAETIMAPNWAMPSTFRFGASGVLDDVLNVLAGGEPAKAASGY 259
BLAST of deoxyribose-phosphate aldolase vs. SwissProt
Match: gi|226729354|sp|B4EWA4.1|DEOC_PROMH (RecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase) HSP 1 Score: 87.4261 bits (215), Expect = 3.513e-21 Identity = 47/92 (51.09%), Postives = 58/92 (63.04%), Query Frame = 0
Query: 2 AGADFIKTSTGKESVNATLPVTLVMIRAIRDYYDRTGYRVGYKPAGGISKAKDAITYLALIKEELSDRWLQPDLFRFGASSLLNDIERQLEH 93
AGADFIKTSTGK VNATL +M++ I D G VG+KPAGG+ A++A YLAL + D W+ FRFGASSLL ++ L H
Sbjct: 161 AGADFIKTSTGKVPVNATLESAELMLQVIHDM--GVGKEVGFKPAGGVRTAEEAAQYLALANRIMGDNWVDARHFRFGASSLLGNLLATLGH 250
BLAST of deoxyribose-phosphate aldolase vs. SwissProt
Match: gi|259645200|sp|C5BHJ2.1|DEOC_EDWI9 (RecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase) HSP 1 Score: 86.2705 bits (212), Expect = 9.672e-21 Identity = 50/100 (50.00%), Postives = 60/100 (60.00%), Query Frame = 0
Query: 2 AGADFIKTSTGKESVNATLPVTLVMIRAIRDYYDRTGYRVGYKPAGGISKAKDAITYLALIKEELSDRWLQPDLFRFGASSLLNDIERQLEHHVTGNYSA 101
AGADFIKTSTGK VNATL +M+ IRD RVG+KPAGG+ A+DA YLAL L + W FRFGASSLL + + L + G S+
Sbjct: 161 AGADFIKTSTGKVPVNATLESAELMMSVIRDM--GVAKRVGFKPAGGVRTAEDAAQYLALADRLLGEGWADSRHFRFGASSLLASLLQTLGYDAKGTGSS 258
BLAST of deoxyribose-phosphate aldolase vs. SwissProt
Match: gi|226729335|sp|B0BPV4.1|DEOC_ACTPJ (RecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase) HSP 1 Score: 86.2705 bits (212), Expect = 1.024e-20 Identity = 45/81 (55.56%), Postives = 54/81 (66.67%), Query Frame = 0
Query: 2 AGADFIKTSTGKESVNATLPVTLVMIRAIRDYYDRTGYRVGYKPAGGISKAKDAITYLALIKEELSDRWLQPDLFRFGASS 82
AGADFIKTSTGK VNATL +M+ IRD + RVG+K AGG+ A++A YLAL +E L W+ D FRFGASS
Sbjct: 160 AGADFIKTSTGKVPVNATLESARIMLETIRDL--KVADRVGFKAAGGVKTAEEAAQYLALAQEILGHDWVNSDHFRFGASS 238
BLAST of deoxyribose-phosphate aldolase vs. SwissProt
Match: gi|226729334|sp|B3H1P7.1|DEOC_ACTP7 (RecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase) HSP 1 Score: 85.5001 bits (210), Expect = 2.189e-20 Identity = 45/81 (55.56%), Postives = 53/81 (65.43%), Query Frame = 0
Query: 2 AGADFIKTSTGKESVNATLPVTLVMIRAIRDYYDRTGYRVGYKPAGGISKAKDAITYLALIKEELSDRWLQPDLFRFGASS 82
AGADFIKTSTGK VNATL +M+ IRD RVG+K AGG+ A++A YLAL +E L W+ D FRFGASS
Sbjct: 160 AGADFIKTSTGKVPVNATLESARIMLETIRDL--NVADRVGFKAAGGVKTAEEAAQYLALAQEILGHDWVNSDHFRFGASS 238
BLAST of deoxyribose-phosphate aldolase vs. SwissProt
Match: gi|171855092|sp|A3N123.1|DEOC_ACTP2 (RecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase) HSP 1 Score: 85.1149 bits (209), Expect = 2.484e-20 Identity = 45/81 (55.56%), Postives = 53/81 (65.43%), Query Frame = 0
Query: 2 AGADFIKTSTGKESVNATLPVTLVMIRAIRDYYDRTGYRVGYKPAGGISKAKDAITYLALIKEELSDRWLQPDLFRFGASS 82
AGADFIKTSTGK VNATL +M+ IRD RVG+K AGG+ A++A YLAL +E L W+ D FRFGASS
Sbjct: 160 AGADFIKTSTGKVPVNATLEYARIMLETIRDL--NVADRVGFKAAGGVKTAEEAAQYLALAQEILGHDWVNSDHFRFGASS 238
BLAST of deoxyribose-phosphate aldolase vs. nr
Match: gi|338759318|gb|AEI95782.1| (deoxyribose-phosphate aldolase DeoC [Roseobacter litoralis Och 149]) HSP 1 Score: 208.379 bits (529), Expect = 5.705e-65 Identity = 99/108 (91.67%), Postives = 102/108 (94.44%), Query Frame = 0
Query: 1 MAGADFIKTSTGKESVNATLPVTLVMIRAIRDYYDRTGYRVGYKPAGGISKAKDAITYLALIKEELSDRWLQPDLFRFGASSLLNDIERQLEHHVTGNYSAGYRHPTS 108
MAGADFIKTSTGKESVNATLPVTLVMIRAIRDYY+R+GYRVGYKPAGGISKAKDAITYLALIKEEL WL P+LFRFGASSLLNDIERQLEHHVTG YSAGYRH TS
Sbjct: 227 MAGADFIKTSTGKESVNATLPVTLVMIRAIRDYYERSGYRVGYKPAGGISKAKDAITYLALIKEELGTAWLAPNLFRFGASSLLNDIERQLEHHVTGQYSAGYRHATS 334
BLAST of deoxyribose-phosphate aldolase vs. nr
Match: gi|950322216|emb|CUH69850.1| (Deoxyribose-phosphate aldolase [Thalassobius autumnalis] >gi|950335028|emb|CUH70942.1| Deoxyribose-phosphate aldolase [Thalassobius autumnalis]) HSP 1 Score: 208.764 bits (530), Expect = 6.736e-65 Identity = 99/105 (94.29%), Postives = 101/105 (96.19%), Query Frame = 0
Query: 1 MAGADFIKTSTGKESVNATLPVTLVMIRAIRDYYDRTGYRVGYKPAGGISKAKDAITYLALIKEELSDRWLQPDLFRFGASSLLNDIERQLEHHVTGNYSAGYRH 105
MAGADFIKTSTGKESVNATLPV+LVMIRAIRDYYDRTGYRVGYKPAGGISKAKDAITYLALIKEEL DRWLQPDLFRFGASSLL DIERQLEHHVTG YSA +RH
Sbjct: 236 MAGADFIKTSTGKESVNATLPVSLVMIRAIRDYYDRTGYRVGYKPAGGISKAKDAITYLALIKEELGDRWLQPDLFRFGASSLLGDIERQLEHHVTGAYSASHRH 340
BLAST of deoxyribose-phosphate aldolase vs. nr
Match: gi|1177221255|ref|WP_082645481.1| (deoxyribose-phosphate aldolase [Thalassobius mediterraneus]) HSP 1 Score: 207.608 bits (527), Expect = 7.071e-65 Identity = 99/105 (94.29%), Postives = 100/105 (95.24%), Query Frame = 0
Query: 1 MAGADFIKTSTGKESVNATLPVTLVMIRAIRDYYDRTGYRVGYKPAGGISKAKDAITYLALIKEELSDRWLQPDLFRFGASSLLNDIERQLEHHVTGNYSAGYRH 105
MAGADFIKTSTGKESVNATLPV+LVMIRAIRDYYDRTGYRVGYKPAGGISKAKDAITYLALIKEEL DRWLQPDLFRFGASSLL DIERQLEHHVTG YSA RH
Sbjct: 200 MAGADFIKTSTGKESVNATLPVSLVMIRAIRDYYDRTGYRVGYKPAGGISKAKDAITYLALIKEELGDRWLQPDLFRFGASSLLGDIERQLEHHVTGAYSASNRH 304
BLAST of deoxyribose-phosphate aldolase vs. nr
Match: gi|1189752161|ref|WP_085797266.1| (deoxyribose-phosphate aldolase [Tropicibacter litoreus] >gi|1188038232|emb|SLN60944.1| Deoxyribose-phosphate aldolase [Tropicibacter litoreus R37]) HSP 1 Score: 208.379 bits (529), Expect = 7.293e-65 Identity = 98/105 (93.33%), Postives = 101/105 (96.19%), Query Frame = 0
Query: 1 MAGADFIKTSTGKESVNATLPVTLVMIRAIRDYYDRTGYRVGYKPAGGISKAKDAITYLALIKEELSDRWLQPDLFRFGASSLLNDIERQLEHHVTGNYSAGYRH 105
MAGADFIKTSTGKESVNATLPVTLVMIRAIRDYYDRTGYRVGYKPAGGISKAKDA+ YL+LIK+EL DRWLQPDLFRFGASSLL DIERQLEHHVTG YSAGYRH
Sbjct: 228 MAGADFIKTSTGKESVNATLPVTLVMIRAIRDYYDRTGYRVGYKPAGGISKAKDALVYLSLIKDELGDRWLQPDLFRFGASSLLGDIERQLEHHVTGAYSAGYRH 332
BLAST of deoxyribose-phosphate aldolase vs. nr
Match: gi|1067256472|gb|OED48490.1| (deoxyribose-phosphate aldolase [Rhodobacteraceae bacterium (ex Bugula neritina AB1)]) HSP 1 Score: 207.994 bits (528), Expect = 7.322e-65 Identity = 97/105 (92.38%), Postives = 102/105 (97.14%), Query Frame = 0
Query: 1 MAGADFIKTSTGKESVNATLPVTLVMIRAIRDYYDRTGYRVGYKPAGGISKAKDAITYLALIKEELSDRWLQPDLFRFGASSLLNDIERQLEHHVTGNYSAGYRH 105
MAGADFIKTSTGKESVNATLPV+LVMIRAIRDYYDRTGYRVGYKPAGGISKAKDA+ YL+L+K+EL DRWLQPDLFRFGASSLLNDIERQLEHHVTG YSAGYRH
Sbjct: 222 MAGADFIKTSTGKESVNATLPVSLVMIRAIRDYYDRTGYRVGYKPAGGISKAKDALVYLSLMKDELGDRWLQPDLFRFGASSLLNDIERQLEHHVTGAYSAGYRH 326 The following BLAST results are available for this feature:
BLAST of deoxyribose-phosphate aldolase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of deoxyribose-phosphate aldolase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of deoxyribose-phosphate aldolase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold11553_size2001:1478..1804- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold11553_size2001-processed-gene-0.1 ID=snap_masked-scaffold11553_size2001-processed-gene-0.1|Name=deoxyribose-phosphate aldolase|organism=Tigriopus kingsejongensis|type=gene|length=327bp|location=Sequence derived from alignment at scaffold11553_size2001:1478..1804- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'deoxyribose-phosphate aldolase' has the following synonyms
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