rho-related gtp-binding protein, snap_masked-scaffold119_size336447-processed-gene-0.0 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000000863 (supercontig:LSalAtl2s:LSalAtl2s1149:7505:31613:1 gene:EMLSAG00000000863 transcript:EMLSAT00000000863 description:"maker-LSalAtl2s1149-augustus-gene-0.4") HSP 1 Score: 176.407 bits (446), Expect = 1.352e-50 Identity = 98/214 (45.79%), Postives = 128/214 (59.81%), Query Frame = 0 Query: 41 DYIPTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSSAMAYESRSEVHEAFELCALAFIKSGRGDLPRSPSSASSSTHKH--LLNNSFGSQSDLSLPKKSGSACSSLKKRAQNISFSS 252 +Y PTSFDKV + V ++ LWDTSG AYD+VRSL Y +A VFLLC+KI+DP SL +V+ KWM E+RRH VPIILCGCQ+DLR D + LSK+GR PV+ EQ L VCCE+ AV+Y+ETSS +E FE+CA A P S + +TH++ L N +++S SGS C ++ Q + FSS Sbjct: 39 EYTPTSFDKVAVKRNVEGKWLEFALWDTSGCSAYDNVRSLPYEEAHVFLLCFKISDPASLSSVRHKWMKELRRH----RPEVPIILCGCQADLRHDPPTIASLSKMGRSPVAPEQALAVCCEIDAVSYVETSSKEG----DSFYEVFEVCAHA----------APPLSTTENTHRNNSSLKNKRNGPNNVSF---SGSECEIRDQQGQKV-FSS 230
BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000001832 (supercontig:LSalAtl2s:LSalAtl2s1315:101571:120466:-1 gene:EMLSAG00000001832 transcript:EMLSAT00000001832 description:"maker-LSalAtl2s1315-augustus-gene-1.4") HSP 1 Score: 151.754 bits (382), Expect = 9.132e-44 Identity = 73/123 (59.35%), Postives = 89/123 (72.36%), Query Frame = 0 Query: 65 LWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSSAMAYESRSEVHEAF 187 +WDTSG P+YD++RSLSY +ADVFLLCYKI+DP SL NVK KW E+RRH VPIILCG S+LR D+ + QLSK GR PV+ EQ L +CCE+ AVNYIETS A E+ ++ H F Sbjct: 4 IWDTSGFPSYDAIRSLSYQEADVFLLCYKISDPASLYNVKNKWSAEVRRH----RPDVPIILCGXHSELRHDSVTMAQLSKTGRSPVTIEQALAICCEIXAVNYIETS---AKENSNDEHLRF 119
BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000007171 (supercontig:LSalAtl2s:LSalAtl2s403:51534:52749:-1 gene:EMLSAG00000007171 transcript:EMLSAT00000007171 description:"maker-LSalAtl2s403-augustus-gene-0.3") HSP 1 Score: 127.872 bits (320), Expect = 6.991e-33 Identity = 68/168 (40.48%), Postives = 98/168 (58.33%), Query Frame = 0 Query: 42 YIPTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSSAMAYESRSEVHEAFELCALAFIKSGRGDLPRSPSSA 209 Y TSF+K ++ V+ ++ +WDT+GS + +S RSL+ +ADVFLLCYKI+D +L + W PEIR PIIL GCQSDLRSD VL L++ GR PVS +Q L + ++ Y+ET++ ++ S S E L +L +K+ R P PS+ Sbjct: 43 YKSTSFEKCSSSSTVSSRRIKFTIWDTAGSHSPNSSRSLAIRNADVFLLCYKISDSNTLFSAINHWTPEIR-----AVSTAPIILVGCQSDLRSDRDVLSSLARQGRAPVSSDQALTLGQQIACRMYVETTAKHSFTSASSAFEVAALASLGILKTPRSFTPSPPSTV 205
BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000006917 (supercontig:LSalAtl2s:LSalAtl2s391:521398:525466:1 gene:EMLSAG00000006917 transcript:EMLSAT00000006917 description:"maker-LSalAtl2s391-augustus-gene-5.30") HSP 1 Score: 110.538 bits (275), Expect = 2.235e-28 Identity = 54/133 (40.60%), Postives = 77/133 (57.89%), Query Frame = 0 Query: 41 DYIPTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSS 173 +Y+PT FD A + V L LWDT+G D +R LSYP DVFL+ + + P S +NV +KW PEI+ H PI+L G + DLR D L+ L+ G+ P+ +EQG +C ++ AV Y+E S+ Sbjct: 34 EYVPTVFDNYSAPMVCDGVPVSLGLWDTAGQEDXDRLRPLSYPQTDVFLITFSVVSPSSFENVTSKWCPEIKHH----CADAPILLVGTKIDLREDKETLQALADAGQAPIKREQGQKLCNKIRAVKYLECSA 162
BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000000691 (supercontig:LSalAtl2s:LSalAtl2s110:223932:225715:1 gene:EMLSAG00000000691 transcript:EMLSAT00000000691 description:"maker-LSalAtl2s110-augustus-gene-2.2") HSP 1 Score: 108.227 bits (269), Expect = 2.126e-27 Identity = 56/164 (34.15%), Postives = 93/164 (56.71%), Query Frame = 0 Query: 41 DYIPTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSSAMAYESRSEVHEAFELCALAFIK---SGRGD 201 +Y+PT FD + + L L+DT+G YD++R L YP+ D+FL+C+ + P S NV+ KW E++++ PI+L G Q DLR+D E LSK + P+++EQG + E+GAV Y E S+ +++ + + F+ +A ++ SG+ D Sbjct: 36 EYVPTVFDNYMVNVMIGDDPYTLGLFDTAGQEDYDNLRHLCYPNTDIFLVCFSVIRPNSFANVRQKWSSEVKKYYKA-----PILLVGTQVDLRNDEKTKEALSKCKQKPITEEQGRSLAKEIGAVRYSECSAI----TQNGLKDVFDEAIIAVLERPSSGKED 190
BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000000880 (supercontig:LSalAtl2s:LSalAtl2s1152:93052:93616:-1 gene:EMLSAG00000000880 transcript:EMLSAT00000000880 description:"maker-LSalAtl2s1152-augustus-gene-0.18") HSP 1 Score: 105.916 bits (263), Expect = 6.125e-27 Identity = 55/143 (38.46%), Postives = 79/143 (55.24%), Query Frame = 0 Query: 33 LDFGVNKM--DYIPTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSS 173 + + NK +Y+PT FD T + L L+DT+G YD +R LSYP DVFL+CY + P S +NV+ KW+PEI H P + G Q LR +A +E+L+K + P+S E G + E+ AV Y+E S+ Sbjct: 21 ISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCYSVVSPSSYENVREKWVPEISHHCQ----RTPFLXVGXQIXLRDEAATIEKLTKNKQKPLSMEVGEKLAKELKAVRYVECSA 159
BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000001745 (supercontig:LSalAtl2s:LSalAtl2s12:127607:129096:-1 gene:EMLSAG00000001745 transcript:EMLSAT00000001745 description:"maker-LSalAtl2s12-snap-gene-1.31") HSP 1 Score: 107.071 bits (266), Expect = 7.407e-27 Identity = 54/132 (40.91%), Postives = 78/132 (59.09%), Query Frame = 0 Query: 42 YIPTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSS 173 Y+PT F+ +A EV +L LWDT+G YD +R LSYPD DV L+C+ I P SL+N+ KW PE++ VPIIL G + DLR+D +++L K+ + PV E G + ++ A Y+E S+ Sbjct: 91 YVPTVFENYVADIEV-----ELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF----CPNVPIILVGNKKDLRNDPNTIKELGKMKQEPVKPEDGRTMAEKINAFAYLECSA 213
BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000012355 (supercontig:LSalAtl2s:LSalAtl2s903:193189:193806:1 gene:EMLSAG00000012355 transcript:EMLSAT00000012355 description:"augustus_masked-LSalAtl2s903-processed-gene-1.2") HSP 1 Score: 97.4413 bits (241), Expect = 1.284e-23 Identity = 46/145 (31.72%), Postives = 80/145 (55.17%), Query Frame = 0 Query: 41 DYIPTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSSAMAYESRSEVHE 185 +Y+PT+ D V+ + + DT G +D +R L YP+ DVF+LC+ + P S +N+K KW+PE+++ P++L G QSDLR D L +L++ PV++ + + +G Y+E SSA+ ++ E+ + Sbjct: 39 EYVPTAIDTYDVVVRVDGVPLTFEMCDTPGQEDFDDLRPLVYPNTDVFILCFSVVSPTSFKNIKEKWIPELKKR---SSRKTPVLLVGTQSDLREDVNTLLELNRNYEAPVTENEAKKMASALGCKGYVE-SSALTQKNLKEIFD 179
BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000002241 (supercontig:LSalAtl2s:LSalAtl2s1425:37157:38278:-1 gene:EMLSAG00000002241 transcript:EMLSAT00000002241 description:"maker-LSalAtl2s1425-augustus-gene-0.6") HSP 1 Score: 91.6633 bits (226), Expect = 1.426e-21 Identity = 58/177 (32.77%), Postives = 83/177 (46.89%), Query Frame = 0 Query: 44 PTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSSAMAYESRSEVHEAFELCALAFIKSGRGDLPRSPSSASSSTHKHLLNN 220 PT FD + + + + K+ L LWDT+G YD +R L+Y ADVFLLC+ + SL N K KW PE+ +H + P++L G ++DLR D+ +S+ +G + + V Y+E SS R V FE A I LP+ A K L N Sbjct: 41 PTVFDCITTSLQRHNIKIKLNLWDTAGQEDYDRLRPLAYHHADVFLLCFALNSNASLYNAKAKWAPELNKHSNA-----PVLLIGLKADLRKDS-----------NSISKREGSDIARSIKTVKYLECSSL----KREGVTTVFESAVDAVI------LPKKAGCAGLKVKKDELRN 191
BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000012715 (supercontig:LSalAtl2s:LSalAtl2s965:433029:434186:-1 gene:EMLSAG00000012715 transcript:EMLSAT00000012715 description:"maker-LSalAtl2s965-snap-gene-3.54") HSP 1 Score: 77.0258 bits (188), Expect = 4.255e-17 Identity = 40/102 (39.22%), Postives = 60/102 (58.82%), Query Frame = 0 Query: 74 YDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSSAM 175 YD +R L+YP ADV ++C+ I P +L NV+ +W+PE+R+H G VPI+L G + DLR D VL L KV + PV + + + A + E S+ + Sbjct: 41 YDRLRILTYP-ADVIIICFAIDRPETLANVRKRWIPEVRQHCKG----VPILLVGNKIDLRDDRMVLSNLRKVQKAPVLFAETRSMAYSINATAFHECSAKL 137
BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|51701843|sp|Q9HF54.1|RHO1_ASHGO (RecName: Full=GTP-binding protein RHO1; Flags: Precursor) HSP 1 Score: 138.658 bits (348), Expect = 6.700e-37 Identity = 71/145 (48.97%), Postives = 94/145 (64.83%), Query Frame = 0 Query: 42 YIPTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSSAMAYESRSEVHEA 186 Y+PT FD +A EV+ +V+L LWDT+G YD +R LSYPD++V L+CY I P SL+NV KW+ E+ G VPIIL GC++DLR+D V+EQL + G+ PVSQ Q V ++GAV YIE S+ + R EV EA Sbjct: 40 YVPTVFDNYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICYSIDLPDSLENVMEKWISEVLYFCQG----VPIILVGCKADLRNDPQVIEQLRQQGQQPVSQAQAQEVADQIGAVEYIECSAKTGFGVR-EVFEA 179
BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|41017752|sp|Q8J212.1|RHO1_KLULA (RecName: Full=GTP-binding protein Rho1; Flags: Precursor) HSP 1 Score: 136.346 bits (342), Expect = 3.962e-36 Identity = 71/145 (48.97%), Postives = 93/145 (64.14%), Query Frame = 0 Query: 42 YIPTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSSAMAYESRSEVHEA 186 Y+PT FD +A EV+ +V+L LWDT+G YD +R LSYPD++V L+CY I P SL+NV KW+ E+ G VPIIL GC++DLR+D V+E+L G PVSQ Q V ++GAV+YIE S+ Y R EV EA Sbjct: 41 YVPTVFDNYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICYSIDLPDSLENVMEKWISEVLHFCQG----VPIILVGCKADLRNDPQVVEELRAQGLQPVSQAQAQEVADQIGAVDYIECSAKTGYGVR-EVFEA 180
BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|132536|sp|P06780.3|RHO1_YEAST (RecName: Full=GTP-binding protein RHO1; AltName: Full=Rho-type GTPase 1; Flags: Precursor) HSP 1 Score: 130.183 bits (326), Expect = 7.054e-34 Identity = 65/145 (44.83%), Postives = 92/145 (63.45%), Query Frame = 0 Query: 42 YIPTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSSAMAYESRSEVHEA 186 Y+PT F+ +A EV+ +V+L LWDT+G YD +R LSYPD++V L+C+ I P SL+NV+ KW+ E+ G VPIIL GC+ DLR+D +EQL + G+ PV+ ++G V ++GA Y E S+ Y R EV EA Sbjct: 39 YVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQG----VPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVR-EVFEA 178
BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|13633675|sp|O77683.1|RND3_PIG (RecName: Full=Rho-related GTP-binding protein RhoE; AltName: Full=Rho family GTPase 3; AltName: Full=Rho-related GTP-binding protein Rho8; AltName: Full=Rnd3; Flags: Precursor) HSP 1 Score: 130.183 bits (326), Expect = 2.010e-33 Identity = 66/177 (37.29%), Postives = 104/177 (58.76%), Query Frame = 0 Query: 41 DYIPTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSSAMAYESRSEVHEAFELCALAFIKSGRGDLPRSPSSASSSTHKHL 217 +Y+PT F+ A+ E++ +++L LWDTSGSP YD+VR LSYPD+D L+C+ I+ P +L +V KW EI+ ++L GC+SDLR+D L +LS + PVS +QG + ++GA YIE S A +S + V + F + LA + ++ R+ S ++ H+ Sbjct: 51 NYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPN----TKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECS---ALQSENSVRDIFHVATLACVNKTNKNVKRNKSQRATKRISHM 220
BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|47606459|sp|P61587.1|RND3_HUMAN (RecName: Full=Rho-related GTP-binding protein RhoE; AltName: Full=Protein MemB; AltName: Full=Rho family GTPase 3; AltName: Full=Rho-related GTP-binding protein Rho8; AltName: Full=Rnd3; Flags: Precursor >gi|47606460|sp|P61588.1|RND3_MOUSE RecName: Full=Rho-related GTP-binding protein RhoE; AltName: Full=Rho family GTPase 3; AltName: Full=Rnd3; Flags: Precursor >gi|52783217|sp|Q6SA80.1|RND3_RAT RecName: Full=Rho-related GTP-binding protein RhoE; AltName: Full=Rho family GTPase 3; AltName: Full=Rnd3; Flags: Precursor) HSP 1 Score: 130.183 bits (326), Expect = 2.010e-33 Identity = 66/177 (37.29%), Postives = 104/177 (58.76%), Query Frame = 0 Query: 41 DYIPTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSSAMAYESRSEVHEAFELCALAFIKSGRGDLPRSPSSASSSTHKHL 217 +Y+PT F+ A+ E++ +++L LWDTSGSP YD+VR LSYPD+D L+C+ I+ P +L +V KW EI+ ++L GC+SDLR+D L +LS + PVS +QG + ++GA YIE S A +S + V + F + LA + ++ R+ S ++ H+ Sbjct: 51 NYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPN----TKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECS---ALQSENSVRDIFHVATLACVNKTNKNVKRNKSQRATKRISHM 220
BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|75054961|sp|Q5R9F4.1|RND3_PONAB (RecName: Full=Rho-related GTP-binding protein RhoE; AltName: Full=Rho family GTPase 3; AltName: Full=Rnd3; Flags: Precursor) HSP 1 Score: 130.183 bits (326), Expect = 2.269e-33 Identity = 66/177 (37.29%), Postives = 104/177 (58.76%), Query Frame = 0 Query: 41 DYIPTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSSAMAYESRSEVHEAFELCALAFIKSGRGDLPRSPSSASSSTHKHL 217 +Y+PT F+ A+ E++ +++L LWDTSGSP YD+VR LSYPD+D L+C+ I+ P +L +V KW EI+ ++L GC+SDLR+D L +LS + PVS +QG + ++GA YIE S A +S + V + F + LA + ++ R+ S ++ H+ Sbjct: 51 NYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPN----TKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECS---ALQSENSVRDIFHVATLACVNKTNKNVKRNKSQRATKRISHM 220
BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|166208513|sp|P34150.3|RACD_DICDI (RecName: Full=Rho-related protein racD) HSP 1 Score: 128.257 bits (321), Expect = 1.312e-32 Identity = 58/133 (43.61%), Postives = 84/133 (63.16%), Query Frame = 0 Query: 41 DYIPTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSS 173 DY+PT FD + + V+LVLWDT+G YD++R LSYP DVF++CY + SL N+K KW+PEI + + G PIIL G ++DLR D L QL + + PVS+++G+ + E+GAV + E S+ Sbjct: 36 DYVPTVFDNFNCLEMYDNKPVNLVLWDTAGQEDYDNLRPLSYPQTDVFIICYSVVKRDSLDNIKYKWLPEINQTNQG----TPIILVGTKTDLREDKKTLSQLQESKQEPVSRDEGVALAKEIGAVQFFECSA 164
BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|1346949|sp|P40792.2|RAC1_DROME (RecName: Full=Ras-related protein Rac1; Flags: Precursor) HSP 1 Score: 125.561 bits (314), Expect = 2.423e-32 Identity = 65/161 (40.37%), Postives = 91/161 (56.52%), Query Frame = 0 Query: 41 DYIPTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSSAMAYESRSEVHEAFE--LCALAFIKSGR 199 +YIPT FD A V+ ++L LWDT+G YD +R LSYP DVFL+C+ + +P S +NV+ KW PE+R H + PIIL G + DLR D +E+L P++ QGL + E+GAV Y+E S+ ++ EA LC + KS R Sbjct: 31 EYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHH----CPSTPIILVGTKLDLRDDKNTIEKLRDKKLAPITYPQGLAMAKEIGAVKYLECSALTQKGLKTVFDEAIRSVLCPVLQPKSKR 187
BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|82235964|sp|Q6DHM9.1|RHOAB_DANRE (RecName: Full=Rho-related GTP-binding protein RhoA-B; Flags: Precursor) HSP 1 Score: 125.561 bits (314), Expect = 2.756e-32 Identity = 63/159 (39.62%), Postives = 95/159 (59.75%), Query Frame = 0 Query: 42 YIPTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSSAMAYESRSEVHEAFELCALAFIKSGRG 200 Y+PT F+ +A EV+ +V+L LWDT+G YD +R LSYPD DV L+C+ I P SL+N+ KW PE++ VPIIL G + DLR+D +L+K+ + PV E+G + +GA Y+E S+ +++ V E FE+ A +++ RG Sbjct: 34 YVPTVFENYVADIEVDSKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF----CPNVPIILVGNKKDLRNDEHTRRELTKMKQEPVKAEEGRDMANRIGAFGYMECSA----KTKDGVREVFEMATRAALQARRG 184
BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|2500183|sp|Q22038.1|RHO1_CAEEL (RecName: Full=Ras-like GTP-binding protein rhoA; Flags: Precursor) HSP 1 Score: 125.176 bits (313), Expect = 4.100e-32 Identity = 62/147 (42.18%), Postives = 90/147 (61.22%), Query Frame = 0 Query: 42 YIPTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSSAMAYESRSEVHEAFE 188 Y+PT F+ +A EV+ +V+L LWDT+G YD +R LSYPD DV L+C+ I P SL+N+ KW PE+R VPIIL G + DLRSD + +L+K+ + PV EQG + ++GA Y+E S+ +++ + E FE Sbjct: 34 YVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPN----VPIILVGNKRDLRSDPQTVRELAKMKQEPVKPEQGRAIAEQIGAFAYLECSA----KTKDGIREVFE 172
BLAST of rho-related gtp-binding protein vs. nr
Match: gi|913307750|ref|XP_013184374.1| (PREDICTED: rho-related GTP-binding protein RhoE-like isoform X3 [Amyelois transitella]) HSP 1 Score: 140.969 bits (354), Expect = 5.715e-35 Identity = 67/152 (44.08%), Postives = 96/152 (63.16%), Query Frame = 0 Query: 42 YIPTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSSAMAYESRSEVHEAFELCALA 193 Y PT F+K T V ++V+ +WDTSG+ AYD+VR L+Y DA +F+LC+ IA+P +L + KW E+R H G P++LCGC++DLR D L LSK+ PV+ E+ L V ++GA Y+ETS+ + S V +AFE+ ALA Sbjct: 49 YTPTGFEKYGYTSTVADYRVNFSVWDTSGTTAYDTVRPLAYQDAKIFMLCFNIAEPETLHSAAAKWYTEVRTHG----GTAPVLLCGCKADLRHDKETLTMLSKLKAHPVTSEEALSVARQLGATTYVETSARV---SSKGVKDAFEVAALA 193
BLAST of rho-related gtp-binding protein vs. nr
Match: gi|1344765305|ref|XP_023951120.1| (GTP-binding protein rho1-like isoform X2 [Bicyclus anynana]) HSP 1 Score: 140.584 bits (353), Expect = 5.853e-35 Identity = 69/152 (45.39%), Postives = 96/152 (63.16%), Query Frame = 0 Query: 42 YIPTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSSAMAYESRSEVHEAFELCALA 193 Y PT F+K T V ++V+ +WDTSG+ AYD+VR L+Y DA +F+LC+ IA+P +L N KW E+R H G+ P++LCGC++DLR D L LSK+ PV+ E+ L V ++GA Y+ETS A S V +AFE+ ALA Sbjct: 48 YTPTGFEKYGYTCTVADYRVNFSVWDTSGTTAYDTVRPLAYQDAKIFMLCFNIAEPETLNNSAAKWYKEVRTHG----GSAPVLLCGCKADLRHDKETLTMLSKLRTHPVTSEEALSVARQLGATTYVETS---ARASSKGVKDAFEVAALA 192
BLAST of rho-related gtp-binding protein vs. nr
Match: gi|1274115120|ref|XP_022822574.1| (rho-related GTP-binding protein RhoE-like [Spodoptera litura] >gi|1274115122|ref|XP_022822575.1| rho-related GTP-binding protein RhoE-like [Spodoptera litura] >gi|1274115124|ref|XP_022822576.1| rho-related GTP-binding protein RhoE-like [Spodoptera litura] >gi|1274115126|ref|XP_022822577.1| rho-related GTP-binding protein RhoE-like [Spodoptera litura]) HSP 1 Score: 140.584 bits (353), Expect = 6.118e-35 Identity = 69/152 (45.39%), Postives = 97/152 (63.82%), Query Frame = 0 Query: 42 YIPTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSSAMAYESRSEVHEAFELCALA 193 Y PT F+K T V ++V+ +WDTSG+ AYD+VR L+Y DA VF+LC+ IA+P +L N KW E+R H G+ P++LCGC++DLR + L LSK+ PV+ E+ L V ++GA+ Y+ETS A S V +AFE+ ALA Sbjct: 49 YTPTGFEKYGCTCAVADYRVNFSVWDTSGTAAYDTVRPLAYQDARVFMLCFNIAEPETLHNAAAKWYREVRTHG----GSAPVLLCGCKADLRHEKETLTMLSKLRTHPVTSEEALSVARQLGAMTYVETS---ARASTKGVKDAFEVAALA 193
BLAST of rho-related gtp-binding protein vs. nr
Match: gi|913307746|ref|XP_013184372.1| (PREDICTED: rho-related GTP-binding protein RhoE-like isoform X1 [Amyelois transitella] >gi|913307748|ref|XP_013184373.1| PREDICTED: rho-related GTP-binding protein RhoE-like isoform X2 [Amyelois transitella]) HSP 1 Score: 140.584 bits (353), Expect = 6.777e-35 Identity = 67/152 (44.08%), Postives = 96/152 (63.16%), Query Frame = 0 Query: 42 YIPTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSSAMAYESRSEVHEAFELCALA 193 Y PT F+K T V ++V+ +WDTSG+ AYD+VR L+Y DA +F+LC+ IA+P +L + KW E+R H G P++LCGC++DLR D L LSK+ PV+ E+ L V ++GA Y+ETS+ + S V +AFE+ ALA Sbjct: 49 YTPTGFEKYGYTSTVADYRVNFSVWDTSGTTAYDTVRPLAYQDAKIFMLCFNIAEPETLHSAAAKWYTEVRTHG----GTAPVLLCGCKADLRHDKETLTMLSKLKAHPVTSEEALSVARQLGATTYVETSARV---SSKGVKDAFEVAALA 193
BLAST of rho-related gtp-binding protein vs. nr
Match: gi|156846695|ref|XP_001646234.1| (hypothetical protein Kpol_1013p48 [Vanderwaltozyma polyspora DSM 70294] >gi|156116908|gb|EDO18376.1| hypothetical protein Kpol_1013p48 [Vanderwaltozyma polyspora DSM 70294]) HSP 1 Score: 140.198 bits (352), Expect = 6.954e-35 Identity = 69/148 (46.62%), Postives = 94/148 (63.51%), Query Frame = 0 Query: 42 YIPTSFDKVLATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISLQNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGPVSQEQGLGVCCEVGAVNYIETSSAMAYESRSEVHEAFEL 189 Y+PT F+ + T EV+ VDL LWDT+G YD +R LSYPD++V L+C+ I P SL+NVK KW+ E+ G VPIIL GC+ DLR+D V++ LSK+G+ PV+ E+G V ++GA YIE S+ Y V E FE+ Sbjct: 54 YVPTVFNNDVTTVEVDGKTVDLALWDTAGQEDYDRLRPLSYPDSNVVLICFAIDLPDSLENVKEKWVSEVYHFCRG----VPIILVGCKMDLRTDTDVIQGLSKIGKEPVTTEEGQTVATQIGAFKYIECSAKTGY----GVRELFEV 193 The following BLAST results are available for this feature:
BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 11
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BLAST of rho-related gtp-binding protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of rho-related gtp-binding protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold119_size336447:20847..27964+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold119_size336447-processed-gene-0.0 ID=snap_masked-scaffold119_size336447-processed-gene-0.0|Name=rho-related gtp-binding protein|organism=Tigriopus kingsejongensis|type=gene|length=7118bp|location=Sequence derived from alignment at scaffold119_size336447:20847..27964+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'rho-related gtp-binding protein' has the following synonyms
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