40s ribosomal protein s26, snap_masked-scaffold12_size759060-processed-gene-6.9 (gene) Tigriopus kingsejongensis

Overview
Name40s ribosomal protein s26
Unique Namesnap_masked-scaffold12_size759060-processed-gene-6.9
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of 40s ribosomal protein s26 vs. L. salmonis genes
Match: EMLSAG00000007897 (supercontig:LSalAtl2s:LSalAtl2s467:110511:112179:1 gene:EMLSAG00000007897 transcript:EMLSAT00000007897 description:"maker-LSalAtl2s467-augustus-gene-1.36")

HSP 1 Score: 190.274 bits (482), Expect = 7.953e-64
Identity = 88/118 (74.58%), Postives = 100/118 (84.75%), Query Frame = 0 
Query:    1 MTQKRRNNGRNKHGRGHVKFVRCINCSKACPKDKAIRKFVIKNIVEAAAVRDISDASVYSSYVLPKLYTKQYYCVSCAIHSRIVRNRSREARRDRSPPPKYTSRPPMQSGGGPRPGGG 118
            MT KRRNNGR KHGRGHVK++RC NCSKACPKDKAIRKFVI+NIVEAAAVRDI+DASVY++Y LPKLY K Y CVSCAIHS++VRNRSREAR+DR+PPP+Y  R PM   G  + G  
Sbjct:    1 MTTKRRNNGRAKHGRGHVKYIRCTNCSKACPKDKAIRKFVIRNIVEAAAVRDIADASVYANYQLPKLYAKLYXCVSCAIHSKVVRNRSREARKDRTPPPRYPIRAPMNQQGANKVGAS 118
[Close]
BLAST of 40s ribosomal protein s26 vs. SwissProt
Match: gi|3123279|sp|P49206.2|RS261_ARATH (RecName: Full=40S ribosomal protein S26-1)

HSP 1 Score: 150.984 bits (380), Expect = 1.220e-46
Identity = 72/116 (62.07%), Postives = 86/116 (74.14%), Query Frame = 0 
Query:    1 MTQKRRNNGRNKHGRGHVKFVRCINCSKACPKDKAIRKFVIKNIVEAAAVRDISDASVYSSYVLPKLYTKQYYCVSCAIHSRIVRNRSREARRDRSPPPKYTSRPPMQSGGGPRPG 116
            MT KRRN GRNKH RGHV  +RC NC K CPKDKAI++F+++NIVE AA+RD+ +ASVY  Y LPKLY K  YCVSCAIHS +VR RSR  RR R+PPP++T R        P+PG
Sbjct:    1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFTRR----KEDTPKPG 112
[Close]
BLAST of 40s ribosomal protein s26 vs. SwissProt
Match: gi|75264413|sp|Q9LYK9.1|RS263_ARATH (RecName: Full=40S ribosomal protein S26-3)

HSP 1 Score: 149.828 bits (377), Expect = 3.234e-46
Identity = 69/104 (66.35%), Postives = 82/104 (78.85%), Query Frame = 0 
Query:    1 MTQKRRNNGRNKHGRGHVKFVRCINCSKACPKDKAIRKFVIKNIVEAAAVRDISDASVYSSYVLPKLYTKQYYCVSCAIHSRIVRNRSREARRDRSPPPKYTSR 104
            MT KRRN GRNKH RGHVK +RC NC K CPKDKAI++F+++NIVE AA+RD+ +ASVY  Y LPKLY K  YCVSCAIHS +VR RSR  RR R+PPP++  R
Sbjct:    1 MTFKRRNGGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARR 104
[Close]
BLAST of 40s ribosomal protein s26 vs. SwissProt
Match: gi|67477362|sp|P21772.2|RS26_NEUCR (RecName: Full=40S ribosomal protein S26E; AltName: Full=13.6 kDa ribosomal protein; AltName: Full=CRP5)

HSP 1 Score: 148.288 bits (373), Expect = 8.930e-46
Identity = 67/100 (67.00%), Postives = 85/100 (85.00%), Query Frame = 0 
Query:    1 MTQKRRNNGRNKHGRGHVKFVRCINCSKACPKDKAIRKFVIKNIVEAAAVRDISDASVYSSYVLPKLYTKQYYCVSCAIHSRIVRNRSREARRDRSPPPK 100
            M +KR+NNGRNK GRGHVK +RC NCS+  PKDKAI++F I+N+VE+AA+RDISDASV++ Y +PK+Y K  YCVSCAIH +IVR RSRE RR+R+PPP+
Sbjct:    1 MVKKRKNNGRNKKGRGHVKPIRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYTVPKMYLKLQYCVSCAIHGKIVRVRSREGRRNRAPPPR 100
[Close]
BLAST of 40s ribosomal protein s26 vs. SwissProt
Match: gi|115502826|sp|Q8LPJ7.2|RS262_ARATH (RecName: Full=40S ribosomal protein S26-2)

HSP 1 Score: 148.673 bits (374), Expect = 9.699e-46
Identity = 71/116 (61.21%), Postives = 85/116 (73.28%), Query Frame = 0 
Query:    1 MTQKRRNNGRNKHGRGHVKFVRCINCSKACPKDKAIRKFVIKNIVEAAAVRDISDASVYSSYVLPKLYTKQYYCVSCAIHSRIVRNRSREARRDRSPPPKYTSRPPMQSGGGPRPG 116
            MT KRRN GRNKH RGHV  +RC NC K CPKDKAI++F+++NIVE AA+RD+ +ASVY  Y LPKLY K  YCVSCAIHS +VR RSR  RR R+PPP++  R        P+PG
Sbjct:    1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARR----KEDTPKPG 112
[Close]
BLAST of 40s ribosomal protein s26 vs. SwissProt
Match: gi|15214276|sp|O93931.1|RS26_SCHCO (RecName: Full=40S ribosomal protein S26)

HSP 1 Score: 147.902 bits (372), Expect = 1.395e-45
Identity = 69/100 (69.00%), Postives = 83/100 (83.00%), Query Frame = 0 
Query:    1 MTQKRRNNGRNKHGRGHVKFVRCINCSKACPKDKAIRKFVIKNIVEAAAVRDISDASVYSSYVLPKLYTKQYYCVSCAIHSRIVRNRSREARRDRSPPPK 100
            MT+KRRN GRNK GRGHV FVRC NCS+   KDKAI++F ++N+VE+AA+RDISDASVY  Y +PKLY K  YCVSCAIHS +VR RSRE RR+R+PPP+
Sbjct:    1 MTKKRRNGGRNKSGRGHVTFVRCSNCSRCVAKDKAIKRFTVRNMVESAAIRDISDASVYPEYAIPKLYIKIAYCVSCAIHSHVVRVRSREGRRNRAPPPR 100
[Close]
BLAST of 40s ribosomal protein s26 vs. SwissProt
Match: gi|730459|sp|P39939.1|RS26B_YEAST (RecName: Full=40S ribosomal protein S26-B; AltName: Full=Small ribosomal subunit protein eS26-B)

HSP 1 Score: 146.747 bits (369), Expect = 3.281e-45
Identity = 73/122 (59.84%), Postives = 87/122 (71.31%), Query Frame = 0 
Query:    1 MTQKRRNNGRNKHGRGHVKFVRCINCSKACPKDKAIRKFVIKNIVEAAAVRDISDASVYSSYVLPKLYTKQYYCVSCAIHSRIVRNRSREARRDRSPPPKYTSRPPMQSGGGPRPGGGAGGG 122
            M +KR +NGRNK GRGHVK VRC+NCSK+ PKDKAI++  I+NIVEAAAVRD+S+ASVY  Y LPK Y K +YCVSCAIH+RIVR RSRE R++R+PP     RP         P   A   
Sbjct:    1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPP----QRPRFNRDNKVSPAAAAKKA 118
[Close]
BLAST of 40s ribosomal protein s26 vs. SwissProt
Match: gi|730458|sp|P39938.1|RS26A_YEAST (RecName: Full=40S ribosomal protein S26-A; AltName: Full=Small ribosomal subunit protein eS26-A)

HSP 1 Score: 146.362 bits (368), Expect = 5.366e-45
Identity = 73/122 (59.84%), Postives = 87/122 (71.31%), Query Frame = 0 
Query:    1 MTQKRRNNGRNKHGRGHVKFVRCINCSKACPKDKAIRKFVIKNIVEAAAVRDISDASVYSSYVLPKLYTKQYYCVSCAIHSRIVRNRSREARRDRSPPPKYTSRPPMQSGGGPRPGGGAGGG 122
            M +KR +NGRNK GRGHVK VRC+NCSK+ PKDKAI++  I+NIVEAAAVRD+S+ASVY  Y LPK Y K +YCVSCAIH+RIVR RSRE R++R+PP     RP         P   A   
Sbjct:    1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPP----QRPRFNRENKVSPADAAKKA 118
[Close]
BLAST of 40s ribosomal protein s26 vs. SwissProt
Match: gi|109940158|sp|P49216.2|RS26_ORYSJ (RecName: Full=40S ribosomal protein S26; AltName: Full=S31)

HSP 1 Score: 130.568 bits (327), Expect = 1.435e-38
Identity = 58/85 (68.24%), Postives = 72/85 (84.71%), Query Frame = 0 
Query:    1 MTQKRRNNGRNKHGRGHVKFVRCINCSKACPKDKAIRKFVIKNIVEAAAVRDISDASVYSSYVLPKLYTKQYYCVSCAIHSRIVR 85
            MT KRRN GRNKHGRGHVK++RC NC+K CPKDKAI++F ++NIVE AA+RD+ +A V+  YVLPKLY K ++CVSCAIH+ IVR
Sbjct:    1 MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHDGYVLPKLYAKVHHCVSCAIHAHIVR 85
[Close]
BLAST of 40s ribosomal protein s26 vs. SwissProt
Match: gi|1173235|sp|P41959.1|RS26_BRUPA (RecName: Full=40S ribosomal protein S26)

HSP 1 Score: 127.872 bits (320), Expect = 3.610e-38
Identity = 60/83 (72.29%), Postives = 70/83 (84.34%), Query Frame = 0 
Query:    1 MTQKRRNNGRNKHGRGHVKFVRCINCSKACPKDKAIRKFVIKNIVEAAAVRDISDASVYSSYVLPKLYTKQYYCVSCAIHSRI 83
            MT KRRN+GRNK GRGHV+ +RC NC +  PKDKAI+KFV++NIV AAAVRDISDAS Y SY LPKLY K +YCVSCAIHS++
Sbjct:    1 MTTKRRNHGRNKKGRGHVRPIRCTNCGRCAPKDKAIKKFVVRNIVVAAAVRDISDASAYDSYALPKLYHKLHYCVSCAIHSKV 83
[Close]
BLAST of 40s ribosomal protein s26 vs. SwissProt
Match: gi|74855344|sp|Q54TL8.1|RS26_DICDI (RecName: Full=40S ribosomal protein S26)

HSP 1 Score: 116.316 bits (290), Expect = 2.954e-33
Identity = 57/102 (55.88%), Postives = 75/102 (73.53%), Query Frame = 0 
Query:    1 MTQKRRNNGRNKHGRGHVKFVRCINCSKACPKDKAIRKFVIKNIVEAAAVRDISDASVYSS--YVLPKLYTKQYYCVSCAIHSRIVRNRSREARRDRSPPPK 100
            MTQKRRN+GR+KHGRG V ++RC NC++  PKDKA+++F I+ IVE AAV+DISD  V++   Y  P+ Y K  YC+SCAIHS IVR RS   R+ R+ P +
Sbjct:    1 MTQKRRNHGRSKHGRGSVPYIRCTNCARCVPKDKAVKRFYIRPIVENAAVKDISDQGVFNVKGYKFPRTYVKSQYCISCAIHSHIVRVRSVADRKIRTRPSR 102
[Close]
BLAST of 40s ribosomal protein s26 vs. nr
Match: gi|225713192|gb|ACO12442.1| (40S ribosomal protein S26 [Lepeophtheirus salmonis] >gi|290561565|gb|ADD38183.1| 40S ribosomal protein S26 [Lepeophtheirus salmonis])

HSP 1 Score: 193.356 bits (490), Expect = 4.265e-61
Identity = 89/118 (75.42%), Postives = 101/118 (85.59%), Query Frame = 0 
Query:    1 MTQKRRNNGRNKHGRGHVKFVRCINCSKACPKDKAIRKFVIKNIVEAAAVRDISDASVYSSYVLPKLYTKQYYCVSCAIHSRIVRNRSREARRDRSPPPKYTSRPPMQSGGGPRPGGG 118
            MT KRRNNGR KHGRGHVK++RC NCSKACPKDKAIRKFVI+NIVEAAAVRDI+DASVY++Y LPKLY K YYCVSCAIHS++VRNRSREAR+DR+PPP+Y  R PM   G  + G  
Sbjct:    1 MTTKRRNNGRAKHGRGHVKYIRCTNCSKACPKDKAIRKFVIRNIVEAAAVRDIADASVYANYQLPKLYAKLYYCVSCAIHSKVVRNRSREARKDRTPPPRYPIRAPMNQQGANKVGAS 118
[Close]
BLAST of 40s ribosomal protein s26 vs. nr
Match: gi|961375720|gb|ALS04604.1| (40S ribosomal protein S26 [Pseudodiaptomus poplesia] >gi|1148369126|gb|AQS22799.1| 40S ribosomal protein s26 [Pseudodiaptomus poplesia])

HSP 1 Score: 184.111 bits (466), Expect = 2.138e-57
Identity = 83/101 (82.18%), Postives = 95/101 (94.06%), Query Frame = 0 
Query:    1 MTQKRRNNGRNKHGRGHVKFVRCINCSKACPKDKAIRKFVIKNIVEAAAVRDISDASVYSSYVLPKLYTKQYYCVSCAIHSRIVRNRSREARRDRSPPPKY 101
            MT KRRNNGRNKHGRGHVK++RC NCSKACPKDKAI+KFVI+NIVEAA VRDISDASVY++Y LPKLY K YYCVSCAIHS++VRNRSREAR+DR+PPP++
Sbjct:    1 MTSKRRNNGRNKHGRGHVKYIRCTNCSKACPKDKAIKKFVIRNIVEAAGVRDISDASVYTAYQLPKLYAKLYYCVSCAIHSKVVRNRSREARKDRTPPPRF 101
[Close]
BLAST of 40s ribosomal protein s26 vs. nr
Match: gi|1148368896|gb|AQS22688.1| (60S ribosomal protein L7a [Pseudodiaptomus poplesia])

HSP 1 Score: 184.111 bits (466), Expect = 2.258e-57
Identity = 83/101 (82.18%), Postives = 95/101 (94.06%), Query Frame = 0 
Query:    1 MTQKRRNNGRNKHGRGHVKFVRCINCSKACPKDKAIRKFVIKNIVEAAAVRDISDASVYSSYVLPKLYTKQYYCVSCAIHSRIVRNRSREARRDRSPPPKY 101
            MT KRRNNGRNKHGRGHVK++RC NCSKACPKDKAI+KFVI+NIVEAA VRDISDASVY++Y LPKLY K YYCVSCAIHS++VRNRSREAR+DR+PPP++
Sbjct:    1 MTSKRRNNGRNKHGRGHVKYIRCTNCSKACPKDKAIKKFVIRNIVEAAGVRDISDASVYTAYQLPKLYAKLYYCVSCAIHSKVVRNRSREARKDRTPPPRF 101
[Close]
BLAST of 40s ribosomal protein s26 vs. nr
Match: gi|908424680|ref|XP_013073598.1| (PREDICTED: 40S ribosomal protein S26-like isoform X1 [Biomphalaria glabrata] >gi|908424682|ref|XP_013073599.1| PREDICTED: 40S ribosomal protein S26-like isoform X2 [Biomphalaria glabrata])

HSP 1 Score: 184.111 bits (466), Expect = 2.310e-57
Identity = 90/126 (71.43%), Postives = 102/126 (80.95%), Query Frame = 0 
Query:    1 MTQKRRNNGRNKHGRGHVKFVRCINCSKACPKDKAIRKFVIKNIVEAAAVRDISDASVYSSYVLPKLYTKQYYCVSCAIHSRIVRNRSREARRDRSPPPKYTSRPPMQSGGGPRPGGGAGGGGGGQ 126
            MT KRRNNGRNK GRGHVK+VRC NC++  PKDKAI+KFVI+NIVEAAAVRDISDASVY  Y LPKLY K  YCVSCAIHS++VRNRSREAR+DR+PP ++  RP  +   GPRPGG A G G  Q
Sbjct:    1 MTVKRRNNGRNKKGRGHVKYVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYEMYALPKLYAKLLYCVSCAIHSKVVRNRSREARKDRTPPIRF--RPIREGQSGPRPGGQAPGAGRNQ 124
[Close]
BLAST of 40s ribosomal protein s26 vs. nr
Match: gi|1325305904|ref|XP_023334570.1| (40S ribosomal protein S26-like [Eurytemora affinis])

HSP 1 Score: 183.726 bits (465), Expect = 3.376e-57
Identity = 86/108 (79.63%), Postives = 97/108 (89.81%), Query Frame = 0 
Query:    1 MTQKRRNNGRNKHGRGHVKFVRCINCSKACPKDKAIRKFVIKNIVEAAAVRDISDASVYSSYVLPKLYTKQYYCVSCAIHSRIVRNRSREARRDRSPPPKYTSRPPMQ 108
            M  KRRN+GRNKHGRGHVK++RC NCSKACPKDKAIRKFVI+NIVEAAAVRDIS+ASVY+SY LPKLY K YYCVSCAIHS++VRNRSREAR+DR+PPP+Y    P Q
Sbjct:    1 MPFKRRNHGRNKHGRGHVKYIRCTNCSKACPKDKAIRKFVIRNIVEAAAVRDISEASVYTSYTLPKLYAKLYYCVSCAIHSKVVRNRSREARKDRTPPPRYGFNRPQQ 108
[Close]
BLAST of 40s ribosomal protein s26 vs. nr
Match: gi|961376270|gb|ALS04879.1| (40S ribosomal protein S26 [Pseudodiaptomus poplesia])

HSP 1 Score: 182.956 bits (463), Expect = 5.792e-57
Identity = 82/101 (81.19%), Postives = 95/101 (94.06%), Query Frame = 0 
Query:    1 MTQKRRNNGRNKHGRGHVKFVRCINCSKACPKDKAIRKFVIKNIVEAAAVRDISDASVYSSYVLPKLYTKQYYCVSCAIHSRIVRNRSREARRDRSPPPKY 101
            MT KRRNNGRNKHGRGHVK++RC NCSKACPKDKAI+KFVI+NIVEAA VRDISDASVY++Y LPKLY K YYCVSCAIHS++VRN+SREAR+DR+PPP++
Sbjct:    1 MTSKRRNNGRNKHGRGHVKYIRCTNCSKACPKDKAIKKFVIRNIVEAAGVRDISDASVYTAYQLPKLYAKLYYCVSCAIHSKVVRNKSREARKDRTPPPRF 101
[Close]
BLAST of 40s ribosomal protein s26 vs. nr
Match: gi|961376004|gb|ALS04746.1| (40S ribosomal protein S26 [Pseudodiaptomus poplesia])

HSP 1 Score: 182.956 bits (463), Expect = 5.986e-57
Identity = 82/101 (81.19%), Postives = 95/101 (94.06%), Query Frame = 0 
Query:    1 MTQKRRNNGRNKHGRGHVKFVRCINCSKACPKDKAIRKFVIKNIVEAAAVRDISDASVYSSYVLPKLYTKQYYCVSCAIHSRIVRNRSREARRDRSPPPKY 101
            MT KRRNNGRNKHGRGHVK++RC NCSKACPKD+AI+KFVI+NIVEAA VRDISDASVY++Y LPKLY K YYCVSCAIHS++VRNRSREAR+DR+PPP++
Sbjct:    1 MTSKRRNNGRNKHGRGHVKYIRCTNCSKACPKDEAIKKFVIRNIVEAAGVRDISDASVYTAYQLPKLYAKLYYCVSCAIHSKVVRNRSREARKDRTPPPRF 101
[Close]
BLAST of 40s ribosomal protein s26 vs. nr
Match: gi|961374784|gb|ALS04136.1| (40S ribosomal protein S26 [Acartia pacifica] >gi|961374786|gb|ALS04137.1| 40S ribosomal protein S26 [Acartia pacifica] >gi|961374788|gb|ALS04138.1| 40S ribosomal protein S26 [Acartia pacifica])

HSP 1 Score: 179.489 bits (454), Expect = 1.657e-55
Identity = 89/122 (72.95%), Postives = 99/122 (81.15%), Query Frame = 0 
Query:    1 MTQKRRNNGRNKHGRGHVKFVRCINCSKACPKDKAIRKFVIKNIVEAAAVRDISDASVYSSYVLPKLYTKQYYCVSCAIHSRIVRNRSREARRDRSPPPKYTSRPPMQSGGGPRPGGGAGGG 122
            M  KRRN GRNKHGRGHVK++RC NCSKACPKDKAIRKFVI+NIVEAAAVRDIS+ASVY SY LPKLY K YYCVSCAIHS++VRNRSRE RRDR+PP +++     Q   G RPG   G G
Sbjct:    1 MPFKRRNGGRNKHGRGHVKYIRCTNCSKACPKDKAIRKFVIRNIVEAAAVRDISEASVYHSYTLPKLYAKLYYCVSCAIHSKVVRNRSREERRDRTPPQRFSFNRQQQ---GNRPGQTGGPG 119
[Close]
BLAST of 40s ribosomal protein s26 vs. nr
Match: gi|961377004|gb|ALS05246.1| (40S ribosomal protein S26 [Tortanus dextrilobatus])

HSP 1 Score: 179.104 bits (453), Expect = 2.172e-55
Identity = 85/108 (78.70%), Postives = 95/108 (87.96%), Query Frame = 0 
Query:    1 MTQKRRNNGRNKHGRGHVKFVRCINCSKACPKDKAIRKFVIKNIVEAAAVRDISDASVYSSYVLPKLYTKQYYCVSCAIHSRIVRNRSREARRDRSPPPKYTSRPPMQ 108
            M  KRRN GRNKHGRGHVK++RC NCSKACPKDKAIRKFVI+NIVEAAAVRDIS+ASVY +Y LPKLY K YYCVSCAIHS++VRNRSREAR+DR+PPP+Y    P Q
Sbjct:    1 MPFKRRNGGRNKHGRGHVKYIRCTNCSKACPKDKAIRKFVIRNIVEAAAVRDISEASVYGAYTLPKLYAKLYYCVSCAIHSKVVRNRSREARKDRTPPPRYGFNRPQQ 108
[Close]
BLAST of 40s ribosomal protein s26 vs. nr
Match: gi|160550187|gb|ABX44798.1| (putative 40S ribosomal protein RPS26, partial [Flustra foliacea])

HSP 1 Score: 177.563 bits (449), Expect = 5.331e-55
Identity = 79/101 (78.22%), Postives = 95/101 (94.06%), Query Frame = 0 
Query:    1 MTQKRRNNGRNKHGRGHVKFVRCINCSKACPKDKAIRKFVIKNIVEAAAVRDISDASVYSSYVLPKLYTKQYYCVSCAIHSRIVRNRSREARRDRSPPPKY 101
            MTQKRRN+GRNKHGRG VKFVRC NC++ CPKDKAI+KFVI+NIVEAAAVRDI++ASVY SYVLPKLY K +YC+SCAIHS++VRNRSR+AR+DR+PPP++
Sbjct:    1 MTQKRRNHGRNKHGRGAVKFVRCTNCARCCPKDKAIKKFVIRNIVEAAAVRDIAEASVYESYVLPKLYAKLHYCISCAIHSKVVRNRSRKARKDRTPPPRF 101
The following BLAST results are available for this feature:
BLAST of 40s ribosomal protein s26 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000078977.953e-6474.58supercontig:LSalAtl2s:LSalAtl2s467:110511:112179:1... [more]
back to top
BLAST of 40s ribosomal protein s26 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
gi|3123279|sp|P49206.2|RS261_ARATH1.220e-4662.07RecName: Full=40S ribosomal protein S26-1[more]
gi|75264413|sp|Q9LYK9.1|RS263_ARATH3.234e-4666.35RecName: Full=40S ribosomal protein S26-3[more]
gi|67477362|sp|P21772.2|RS26_NEUCR8.930e-4667.00RecName: Full=40S ribosomal protein S26E; AltName:... [more]
gi|115502826|sp|Q8LPJ7.2|RS262_ARATH9.699e-4661.21RecName: Full=40S ribosomal protein S26-2[more]
gi|15214276|sp|O93931.1|RS26_SCHCO1.395e-4569.00RecName: Full=40S ribosomal protein S26[more]
gi|730459|sp|P39939.1|RS26B_YEAST3.281e-4559.84RecName: Full=40S ribosomal protein S26-B; AltName... [more]
gi|730458|sp|P39938.1|RS26A_YEAST5.366e-4559.84RecName: Full=40S ribosomal protein S26-A; AltName... [more]
gi|109940158|sp|P49216.2|RS26_ORYSJ1.435e-3868.24RecName: Full=40S ribosomal protein S26; AltName: ... [more]
gi|1173235|sp|P41959.1|RS26_BRUPA3.610e-3872.29RecName: Full=40S ribosomal protein S26[more]
gi|74855344|sp|Q54TL8.1|RS26_DICDI2.954e-3355.88RecName: Full=40S ribosomal protein S26[more]

Pages

back to top
BLAST of 40s ribosomal protein s26 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|225713192|gb|ACO12442.1|4.265e-6175.4240S ribosomal protein S26 [Lepeophtheirus salmonis... [more]
gi|961375720|gb|ALS04604.1|2.138e-5782.1840S ribosomal protein S26 [Pseudodiaptomus poplesi... [more]
gi|1148368896|gb|AQS22688.1|2.258e-5782.1860S ribosomal protein L7a [Pseudodiaptomus poplesi... [more]
gi|908424680|ref|XP_013073598.1|2.310e-5771.43PREDICTED: 40S ribosomal protein S26-like isoform ... [more]
gi|1325305904|ref|XP_023334570.1|3.376e-5779.6340S ribosomal protein S26-like [Eurytemora affinis... [more]
gi|961376270|gb|ALS04879.1|5.792e-5781.1940S ribosomal protein S26 [Pseudodiaptomus poplesi... [more]
gi|961376004|gb|ALS04746.1|5.986e-5781.1940S ribosomal protein S26 [Pseudodiaptomus poplesi... [more]
gi|961374784|gb|ALS04136.1|1.657e-5572.9540S ribosomal protein S26 [Acartia pacifica] >gi|9... [more]
gi|961377004|gb|ALS05246.1|2.172e-5578.7040S ribosomal protein S26 [Tortanus dextrilobatus][more]
gi|160550187|gb|ABX44798.1|5.331e-5578.22putative 40S ribosomal protein RPS26, partial [Flu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold12_size759060supercontigscaffold12_size759060:722108..722569 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold12_size759060-processed-gene-6.9-mRNA-1snap_masked-scaffold12_size759060-processed-gene-6.9-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold12_size759060:722108..722569+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold12_size759060-processed-gene-6.9 ID=snap_masked-scaffold12_size759060-processed-gene-6.9|Name=40s ribosomal protein s26|organism=Tigriopus kingsejongensis|type=gene|length=462bp|location=Sequence derived from alignment at scaffold12_size759060:722108..722569+ (Tigriopus kingsejongensis)
ATGACGCAGAAGCGGCGTAATAACGGGCGCAACAAGCACGGCCGAGGCCA
TGTCAAGTTCGTGCGTTGCATCAACTGCTCCAAGGCTTGTCCCAAGGACA
AGGCCATCCGCAAGTTCGTGATCAAGAACATCGTGGAGGCCGCCGCCGTG
CGCGACATCTCCGACGCCTCGGTCTACTCGTCGTACGTCCTGCCCAAGCT
CTACACCAAGCAGTACTACTGCGTCTCGTGCGCTATTCACAGCCGTATCG
TGCGCAATCGATCGCGAGAAGCTCGCCGTGACCGATCCCCGCCCCCCAAG
TACACCAGCCGACCCCCCATGCAGTCCGGCGGTGGACCCCGACCCGGTGG
AGGCGCCGGCGGCGGTGGTGGTGGTCAAGGCGGTGGTGGTGGAGGCGGAG
GAGGCGGCGGTGGTGGAGCCGGTGGCGGCCCAGGTGGACCCGGAGGTCCA
CCCAAGGCTTAA
back to top
Synonyms
The feature '40s ribosomal protein s26' has the following synonyms
Synonym
Tk05588
Add to Basket