1500034j20rik protein, snap_masked-scaffold139_size317827-processed-gene-1.7 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 1500034j20rik protein vs. L. salmonis genes
Match: EMLSAG00000008083 (supercontig:LSalAtl2s:LSalAtl2s481:171581:178388:-1 gene:EMLSAG00000008083 transcript:EMLSAT00000008083 description:"maker-LSalAtl2s481-augustus-gene-1.18") HSP 1 Score: 62.3882 bits (150), Expect = 2.415e-12 Identity = 32/88 (36.36%), Postives = 48/88 (54.55%), Query Frame = 0 Query: 62 GDVLILKHPQTPAMRICKRVKALPGETHPLESTK--TIPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAPFATETAWNPRR 147 G+++I P+ P + KR+ AL G+T +E I +G+ WVEGDN+ S+DS YG +P+GL G+ AT W P + Sbjct: 93 GEIVIFVSPRNPKDIVIKRIIALQGDTVLIEGQDPIKIERGYCWVEGDNSLNSIDSTKYGQIPVGLIFGK--------ATRVLWPPNK 172
BLAST of 1500034j20rik protein vs. SwissProt
Match: gi|81903593|sp|Q9CQU8.1|IMP1L_MOUSE (RecName: Full=Mitochondrial inner membrane protease subunit 1; AltName: Full=IMP1-like protein) HSP 1 Score: 89.7373 bits (221), Expect = 3.520e-22 Identity = 55/150 (36.67%), Postives = 77/150 (51.33%), Query Frame = 0 Query: 1 MKSWTLGRFLR---HTIVCGSILYTTNTCLVSAWWLSEDSMEPTFRDGQLVLAQPWP--WCGPLVSGDVLILKHPQTPAMRICKRVKALPGE----THP---LESTKTIPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAPFA 138 M LG+ R +TI G I + + S SMEPT ++ +V A+ + G + GD++I K P P ICKRV L G+ T P +S +P GHVW+EGDN S DS+ YGP+P GL GR+ ++ PF+ Sbjct: 1 MLRGVLGKAFRLAGYTIQYGCIAHCAFEYVGGVVMCSGPSMEPTIQNSDIVFAENLSRHFYG-IQRGDIVIAKSPSDPKSNICKRVIGLEGDKILSTSPSDVFKSRSYVPTGHVWLEGDNLQNSTDSRYYGPIPYGLIRGRIFFKIWPFS 149
BLAST of 1500034j20rik protein vs. SwissProt
Match: gi|74752020|sp|Q96LU5.1|IMP1L_HUMAN (RecName: Full=Mitochondrial inner membrane protease subunit 1; AltName: Full=IMP1-like protein) HSP 1 Score: 87.0409 bits (214), Expect = 4.297e-21 Identity = 51/140 (36.43%), Postives = 73/140 (52.14%), Query Frame = 0 Query: 8 RFLRHTIVCGSILYTTNTCLVSAWWLSEDSMEPTFRDGQLVLAQPWP--WCGPLVSGDVLILKHPQTPAMRICKRVKALPGE----THP---LESTKTIPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAPFA 138 R + +TI G I + + S SMEPT ++ +V A+ + G + GD++I K P P ICKRV L G+ T P +S +P GHVW+EGDN S DS+ YGP+P GL GR+ ++ P + Sbjct: 11 RLVGYTIQYGCIAHCAFEYVGGVVMCSGPSMEPTIQNSDIVFAENLSRHFYG-IQRGDIVIAKSPSDPKSNICKRVIGLEGDKILTTSPSDFFKSHSYVPMGHVWLEGDNLQNSTDSRCYGPIPYGLIRGRIFFKIWPLS 149
BLAST of 1500034j20rik protein vs. SwissProt
Match: gi|118595721|sp|Q28I39.1|IMP1L_XENTR (RecName: Full=Mitochondrial inner membrane protease subunit 1; AltName: Full=IMP1-like protein) HSP 1 Score: 86.2705 bits (212), Expect = 6.687e-21 Identity = 52/143 (36.36%), Postives = 75/143 (52.45%), Query Frame = 0 Query: 5 TLGRFLRHTIVCGSILYTTNTCLVSAWWLSEDSMEPTFRDGQLVLAQPWP-WCGPLVSGDVLILKHPQTPAMRICKRVKALPGE-------THPLESTKTIPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAPFAT 139 TLG L +TI G I + + S SMEPT R+ ++L + GD+++ K P P++ ICKRV L G+ + L+ +PKGHVW+EGDN S DS++YGPVP L GR+ +R+ P + Sbjct: 9 TLG-LLGYTIQYGCIAHCAFEYIGEVVICSGPSMEPTIRNYDVLLCDNLSRHFFSIHKGDIIVAKSPDKPSVNICKRVIGLEGDKVCMSSPSALLKRHTYVPKGHVWLEGDNLDNSTDSRSYGPVPYALIRGRICLRVWPLES 150
BLAST of 1500034j20rik protein vs. SwissProt
Match: gi|1170551|sp|P46972.1|IMP2_YEAST (RecName: Full=Mitochondrial inner membrane protease subunit 2) HSP 1 Score: 78.9518 bits (193), Expect = 5.454e-18 Identity = 50/146 (34.25%), Postives = 72/146 (49.32%), Query Frame = 0 Query: 8 RFLRHTIVCGS---ILYTTNTCLVSAWWLSEDSMEPTFRDGQLVLAQPWPWC--------GPLVSGDVLILKHPQTPAMRICKRVKALPGET------HPLESTKTIPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAP 136 RFLR+T++ S +L T N +V + SM+PT LA W L D+++ K P P CKRVK LP +T +P + +P+GH+WVEGDN S+DS T+GP+ GL G+ + + P Sbjct: 9 RFLRNTLIAISWVPVLLTINNNVVHIAQVKGTSMQPTLNPQTETLATDWVLLWKFGVKNPSNLSRDDIILFKAPTNPRKVYCKRVKGLPFDTIDTKFPYP-KPQVNLPRGHIWVEGDNYFHSIDSNTFGPISSGLVIGKAITIVWP 153
BLAST of 1500034j20rik protein vs. SwissProt
Match: gi|74654757|sp|O74800.1|IMP1_SCHPO (RecName: Full=Mitochondrial inner membrane protease subunit 1) HSP 1 Score: 77.7962 bits (190), Expect = 1.311e-17 Identity = 45/132 (34.09%), Postives = 67/132 (50.76%), Query Frame = 0 Query: 13 TIVCGSILYTTNTCLVSAWWLSEDSMEPTFRDG-QLVLAQPWP--WCGPLVSGDVLILKHPQTPAMRICKRVKALPGET---HPLESTK--TIPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAP 136 + + ++ + L S SM PT G + VL + GDV++ P +CKR+ +PG+T P S K TIP GHVW+ GDN + S+DS+ YGPVP+GL + +V+ R+ P Sbjct: 11 VVQIAAFVHQIHEYLFQVQMTSGPSMMPTLNSGGEFVLLDKLHGRFARSCSVGDVVVSAKPSDSKQHVCKRIIGMPGDTIYVDPTSSNKKITIPLGHVWLAGDNIAHSLDSRNYGPVPMGLIKAKVIARVWP 142
BLAST of 1500034j20rik protein vs. SwissProt
Match: gi|74665564|sp|Q9UST2.1|IMP2L_SCHPO (RecName: Full=Mitochondrial inner membrane protease subunit 2) HSP 1 Score: 70.8626 bits (172), Expect = 8.334e-15 Identity = 42/129 (32.56%), Postives = 61/129 (47.29%), Query Frame = 0 Query: 19 ILYTTNTCLVSAWWLSEDSMEPTFRDGQLVLAQP----WPWCGPLVSGDVLILKHPQTPAMRICKRVKALPGETHPLESTKT-----IPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAPFA 138 +L +VS + SM+P F +L + W W GDV+IL+ P+ P + KRV + + K +P+GHVWVEGD S+DS +GPV GL +V+ L PF+ Sbjct: 28 VLMFVEQHVVSVGTIEGRSMKPAFNPETNMLQRDRVLLWKWNKDYKRGDVVILRSPENPEELLVKRVLGVEYDIMKTRPPKKLSLVPVPEGHVWVEGDEQFHSIDSNKFGPVSTGLITAKVIAILFPFS 156
BLAST of 1500034j20rik protein vs. SwissProt
Match: gi|118595722|sp|Q2KI92.1|IMP2L_BOVIN (RecName: Full=Mitochondrial inner membrane protease subunit 2; AltName: Full=IMP2-like protein) HSP 1 Score: 66.6254 bits (161), Expect = 2.705e-13 Identity = 44/123 (35.77%), Postives = 60/123 (48.78%), Query Frame = 0 Query: 37 SMEPTFRDG-----QLVLAQPWPWCGPLVS-GDVLILKHPQTPAMRICKRVKALPGETHPLESTKT----IPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAPFATETAWNPRRAQ 149 SM+P+ G +VL W V GD++ L P+ P +I KRV AL G+ K +P+GH+WVEGD+ S DS ++GPV +GL L AT W P+R Q Sbjct: 43 SMQPSLNPGGSQSSDVVLLNHWKVRNFEVQRGDIVSLVSPKNPEQKIIKRVIALEGDIVKTMGHKNRYVKVPRGHIWVEGDHHGHSFDSNSFGPVSLGL--------LHAHATHILWPPKRWQ 157
BLAST of 1500034j20rik protein vs. SwissProt
Match: gi|82196234|sp|Q5PQ63.1|IMP2L_XENLA (RecName: Full=Mitochondrial inner membrane protease subunit 2; AltName: Full=IMP2-like protein) HSP 1 Score: 65.0846 bits (157), Expect = 9.406e-13 Identity = 48/134 (35.82%), Postives = 62/134 (46.27%), Query Frame = 0 Query: 37 SMEPTFR-----DGQLVLAQPWPWCGPLVS-GDVLILKHPQTPAMRICKRVKALPGETHPLESTKT----IPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAPFATETAWNPRRAQ-----LPSLRE 155 SM+P+ + +VL W V GD++ L P+ P +I KRV AL G+ K +P+GHVWVEGD+ S DS +GPV +GL L AT W P R Q LP RE Sbjct: 40 SMQPSLNPDARGESDIVLLNRWRARNYDVQRGDIVSLVSPKNPEQKIIKRVIALEGDIVKTLGHKNRYVKVPRGHVWVEGDHHGHSFDSNAFGPVSLGL--------LHSHATHILWPPNRWQKLKPFLPVERE 165
BLAST of 1500034j20rik protein vs. SwissProt
Match: gi|74752143|sp|Q96T52.1|IMP2L_HUMAN (RecName: Full=Mitochondrial inner membrane protease subunit 2; AltName: Full=IMP2-like protein) HSP 1 Score: 65.0846 bits (157), Expect = 1.326e-12 Identity = 45/124 (36.29%), Postives = 60/124 (48.39%), Query Frame = 0 Query: 37 SMEPTFRDG-----QLVLAQPWPWCGPLVS-GDVLILKHPQTPAMRICKRVKALPGET-----HPLESTKTIPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAPFATETAWNPRRAQ 149 SM+P+ G +VL W V GD++ L P+ P +I KRV AL G+ H K +P+GH+WVEGD+ S DS ++GPV +GL L AT W P R Q Sbjct: 43 SMQPSLNPGGSQSSDVVLLNHWKVRNFEVHRGDIVSLVSPKNPEQKIIKRVIALEGDIVRTIGHKNRYVK-VPRGHIWVEGDHHGHSFDSNSFGPVSLGL--------LHAHATHILWPPERWQ 157
BLAST of 1500034j20rik protein vs. SwissProt
Match: gi|124418|sp|P28627.3|IMP1_YEAST (RecName: Full=Mitochondrial inner membrane protease subunit 1) HSP 1 Score: 65.0846 bits (157), Expect = 1.646e-12 Identity = 32/89 (35.96%), Postives = 47/89 (52.81%), Query Frame = 0 Query: 62 GDVLILKHPQTPAMRICKRVKALPGETHPLESTKTI-------------------PKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVV 131 GD ++ P P RICKRV +PG+ ++ + + P+GHVWV GDN S S+DS+TY +P+GL G++V Sbjct: 67 GDCIVALKPTDPNHRICKRVTGMPGDLVLVDPSTIVNYVGDVLVDEERFGTYIKVPEGHVWVTGDNLSHSLDSRTYNALPMGLIMGKIV 155
BLAST of 1500034j20rik protein vs. nr
Match: gi|954253381|gb|KRX47786.1| (Mitochondrial inner membrane protease subunit 1 [Trichinella murrelli]) HSP 1 Score: 98.9821 bits (245), Expect = 7.333e-22 Identity = 53/126 (42.06%), Postives = 70/126 (55.56%), Query Frame = 0 Query: 13 TIVC-GSILYTTNTCLVSAWWLSEDSMEPTFRDGQLVLAQPWPWCGPLVS-GDVLILKHPQTPAMRICKRVKALPGETHPLESTKTIPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAP 136 TIVC G + Y N S SMEPT RDG++ + + S GDV++ P+ P+ ICKRV A+ GE P + I GHVW+EGDN S S DS+ YG VP L +G+V+ R+ P Sbjct: 188 TIVCSGCVFYVFNEQFYSVTICKGSSMEPTIRDGEMFIVKSLVSQTKTTSRGDVVVAISPEEPSTFICKRVVAVEGEPQPSHEFRRIRTGHVWLEGDNKSFSRDSRHYGDVPFALLKGKVIYRIWP 313
BLAST of 1500034j20rik protein vs. nr
Match: gi|1051198808|ref|XP_017682501.1| (PREDICTED: mitochondrial inner membrane protease subunit 1 isoform X2 [Lepidothrix coronata]) HSP 1 Score: 95.1301 bits (235), Expect = 7.560e-22 Identity = 54/140 (38.57%), Postives = 76/140 (54.29%), Query Frame = 0 Query: 8 RFLRHTIVCGSILYTTNTCLVSAWWLSEDSMEPTFRDGQLVLAQPWP---WCGPLVSGDVLILKHPQTPAMRICKRVKALPGE-------THPLESTKTIPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAPF 137 RFL +T+ G I + L S SMEPT ++ +V ++ +C + GD++I+K P P ICKRV L G+ + L+S +PKGHVW+EGDN S DS+ YGPVP GL GR+ ++L P Sbjct: 11 RFLGYTVQYGCIAHCAFEYLGGIVVCSGPSMEPTIQNSDVVFSENLSRHFYC--IRKGDIVIVKSPNDPKSNICKRVIGLEGDKVCTSNPSDFLKSHSYVPKGHVWLEGDNLRNSTDSRCYGPVPYGLIRGRICLKLWPL 148
BLAST of 1500034j20rik protein vs. nr
Match: gi|1209997316|ref|XP_021392398.1| (mitochondrial inner membrane protease subunit 1 [Lonchura striata domestica]) HSP 1 Score: 95.9005 bits (237), Expect = 9.414e-22 Identity = 54/140 (38.57%), Postives = 76/140 (54.29%), Query Frame = 0 Query: 8 RFLRHTIVCGSILYTTNTCLVSAWWLSEDSMEPTFRDGQLVLAQPWP---WCGPLVSGDVLILKHPQTPAMRICKRVKALPGE-------THPLESTKTIPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAPF 137 RFL +T+ G I + L S SMEPT ++ +V ++ +C + GD++I+K P P ICKRV L G+ + L+S +PKGHVW+EGDN S DS+ YGPVP GL GR+ ++L P Sbjct: 43 RFLGYTVQYGCIAHCAFEYLGGIVVCSGPSMEPTIQNSDIVFSESLSRHFYC--IRKGDIVIVKSPNDPKSNICKRVIGLEGDKVCTSNPSDFLKSHSYVPKGHVWLEGDNLRNSTDSRCYGPVPYGLIRGRICLKLWPL 180
BLAST of 1500034j20rik protein vs. nr
Match: gi|1341012076|ref|XP_023784228.1| (mitochondrial inner membrane protease subunit 1 [Cyanistes caeruleus] >gi|1341012078|ref|XP_023784229.1| mitochondrial inner membrane protease subunit 1 [Cyanistes caeruleus] >gi|1341012080|ref|XP_023784230.1| mitochondrial inner membrane protease subunit 1 [Cyanistes caeruleus] >gi|1341012082|ref|XP_023784231.1| mitochondrial inner membrane protease subunit 1 [Cyanistes caeruleus]) HSP 1 Score: 94.7449 bits (234), Expect = 1.067e-21 Identity = 54/139 (38.85%), Postives = 78/139 (56.12%), Query Frame = 0 Query: 8 RFLRHTIVCGSILYTTNTCLVSAWWLSEDSMEPTFRDGQLVLAQPWP---WCGPLVSGDVLILKHPQTPAMRICKRVKALPGE----THP---LESTKTIPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAP 136 RFL +T+ G I + L S SMEPT ++ +V ++ +C + GD++I+K P P ICKRV L G+ ++P L+S +PKGHVW+EGDN S DS+ YGPVP GL GR+ +++ P Sbjct: 11 RFLGYTVQYGCIAHCAFEYLGGIVVCSGPSMEPTIQNSDIVFSENLSRHFYC--IRKGDIVIVKSPNDPKSNICKRVIGLEGDKVCTSNPSDFLKSHSYVPKGHVWLEGDNLRNSTDSRYYGPVPYGLIRGRICLKIWP 147
BLAST of 1500034j20rik protein vs. nr
Match: gi|697433556|ref|XP_009676699.1| (PREDICTED: mitochondrial inner membrane protease subunit 1 [Struthio camelus australis] >gi|697433560|ref|XP_009676706.1| PREDICTED: mitochondrial inner membrane protease subunit 1 [Struthio camelus australis]) HSP 1 Score: 94.7449 bits (234), Expect = 1.067e-21 Identity = 53/139 (38.13%), Postives = 75/139 (53.96%), Query Frame = 0 Query: 8 RFLRHTIVCGSILYTTNTCLVSAWWLSEDSMEPTFRDGQLVLAQPWP---WCGPLVSGDVLILKHPQTPAMRICKRVKALPGE-------THPLESTKTIPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAP 136 RFL +T+ G I + L S SMEPT ++ +V ++ +C + GD++I+K P P ICKRV L G+ + L+S +PKGHVW+EGDN S DS+ YGPVP GL GR+ ++ P Sbjct: 11 RFLGYTVQYGCIAHCAFEYLGGIVVCSGPSMEPTIQNSDIVFSENLSRHFYC--IQKGDIVIVKSPHDPKSNICKRVIGLEGDKVCTSNPSDFLKSHSYVPKGHVWLEGDNLRNSTDSRCYGPVPYGLIRGRICFKIWP 147 The following BLAST results are available for this feature:
BLAST of 1500034j20rik protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of 1500034j20rik protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 12
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BLAST of 1500034j20rik protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold139_size317827:135746..136356+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold139_size317827-processed-gene-1.7 ID=snap_masked-scaffold139_size317827-processed-gene-1.7|Name=1500034j20rik protein|organism=Tigriopus kingsejongensis|type=gene|length=611bp|location=Sequence derived from alignment at scaffold139_size317827:135746..136356+ (Tigriopus kingsejongensis)back to top Synonyms
The feature '1500034j20rik protein' has the following synonyms
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