1500034j20rik protein, snap_masked-scaffold139_size317827-processed-gene-1.7 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 1500034j20rik protein vs. L. salmonis genes
Match: EMLSAG00000008083 (supercontig:LSalAtl2s:LSalAtl2s481:171581:178388:-1 gene:EMLSAG00000008083 transcript:EMLSAT00000008083 description:"maker-LSalAtl2s481-augustus-gene-1.18") HSP 1 Score: 62.3882 bits (150), Expect = 2.415e-12 Identity = 32/88 (36.36%), Postives = 48/88 (54.55%), Query Frame = 0 Query: 62 GDVLILKHPQTPAMRICKRVKALPGETHPLESTK--TIPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAPFATETAWNPRR 147 G+++I P+ P + KR+ AL G+T +E I +G+ WVEGDN+ S+DS YG +P+GL G+ AT W P + Sbjct: 93 GEIVIFVSPRNPKDIVIKRIIALQGDTVLIEGQDPIKIERGYCWVEGDNSLNSIDSTKYGQIPVGLIFGK--------ATRVLWPPNK 172
BLAST of 1500034j20rik protein vs. SwissProt
Match: gi|81896985|sp|Q8BPT6.1|IMP2L_MOUSE (RecName: Full=Mitochondrial inner membrane protease subunit 2; AltName: Full=IMP2-like protein) HSP 1 Score: 63.5438 bits (153), Expect = 4.373e-12 Identity = 44/123 (35.77%), Postives = 59/123 (47.97%), Query Frame = 0 Query: 37 SMEPTFRDG-----QLVLAQPWPWCGPLVS-GDVLILKHPQTPAMRICKRVKALPGETHPLESTKT----IPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAPFATETAWNPRRAQ 149 SM+P+ G +VL W V GD++ L P+ P +I KRV AL G+ K +P+GH+WVEGD+ S DS ++GPV +GL L AT W P R Q Sbjct: 43 SMQPSLNPGGSQSSDVVLLNHWKVRNFEVQRGDIVSLVSPKNPEQKIIKRVIALEGDIVRTIGHKNRLVKVPRGHMWVEGDHHGHSFDSNSFGPVSLGL--------LHAHATHILWPPERWQ 157
BLAST of 1500034j20rik protein vs. SwissProt
Match: gi|82199928|sp|Q6AZD4.1|IMP2L_DANRE (RecName: Full=Mitochondrial inner membrane protease subunit 2; AltName: Full=IMP2-like protein) HSP 1 Score: 61.2326 bits (147), Expect = 3.367e-11 Identity = 41/123 (33.33%), Postives = 59/123 (47.97%), Query Frame = 0 Query: 37 SMEPTFR-DGQ----LVLAQPWPWCGPLVS-GDVLILKHPQTPAMRICKRVKALPGETHPLESTKT----IPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAPFATETAWNPRRAQ 149 SM+P+ DG+ +VL W V GD++ + P+ P +I KRV + G+ K +P GH+W+EGD+ S DS +GPV +GL GR A+ W P R Q Sbjct: 42 SMQPSLNPDGESSPDVVLLNRWSVRNYHVQRGDIVSVLSPKNPQQKIIKRVIGIEGDFIKTLGYKNRYVRVPDGHLWIEGDHHGHSFDSNAFGPVSLGLVHGR--------ASHIIWPPSRWQ 156
BLAST of 1500034j20rik protein vs. nr
Match: gi|954531527|gb|KRZ56028.1| (Mitochondrial inner membrane protease subunit 1, partial [Trichinella nativa]) HSP 1 Score: 101.293 bits (251), Expect = 8.150e-24 Identity = 53/126 (42.06%), Postives = 70/126 (55.56%), Query Frame = 0 Query: 13 TIVC-GSILYTTNTCLVSAWWLSEDSMEPTFRDGQLVLAQPWPWCGPLVS-GDVLILKHPQTPAMRICKRVKALPGETHPLESTKTIPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAP 136 TIVC G + Y N S SMEPT RDG++ + + S GDV++ P+ P+ ICKRV A+ GE P + I GHVW+EGDN S S DS+ YG VP L +G+V+ R+ P Sbjct: 67 TIVCSGCVFYVFNEQFYSVTICKGSSMEPTIRDGEMFIVKSLASQTKTTSRGDVVVAISPEEPSTFICKRVVAIEGEAQPSHEFRRIRTGHVWLEGDNKSFSRDSRHYGDVPFALLKGKVIYRIWP 192
BLAST of 1500034j20rik protein vs. nr
Match: gi|1194491656|gb|OUC40668.1| (signal peptidase I [Trichinella nativa]) HSP 1 Score: 100.908 bits (250), Expect = 1.066e-23 Identity = 53/126 (42.06%), Postives = 70/126 (55.56%), Query Frame = 0 Query: 13 TIVC-GSILYTTNTCLVSAWWLSEDSMEPTFRDGQLVLAQPWPWCGPLVS-GDVLILKHPQTPAMRICKRVKALPGETHPLESTKTIPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAP 136 TIVC G + Y N S SMEPT RDG++ + + S GDV++ P+ P+ ICKRV A+ GE P + I GHVW+EGDN S S DS+ YG VP L +G+V+ R+ P Sbjct: 67 TIVCSGCVFYVFNEQFYSVTICKGSSMEPTIRDGEMFIVKSLASQTKTTSRGDVVVAISPEEPSTFICKRVVAIEGEAQPSHEFRRIRTGHVWLEGDNKSFSRDSRHYGDVPFALLKGKVIYRIWP 192
BLAST of 1500034j20rik protein vs. nr
Match: gi|1061479830|gb|ODM97312.1| (Mitochondrial inner membrane protease subunit 1 [Orchesella cincta]) HSP 1 Score: 100.138 bits (248), Expect = 1.279e-23 Identity = 50/117 (42.74%), Postives = 70/117 (59.83%), Query Frame = 0 Query: 37 SMEPTFRDGQLVLAQPW-PWCGPLVSGDVLILKHPQTPAMRICKRVKALPGETHPLESTKT---IPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAPFATETAWNPRRAQ 149 SMEP R ++ + P G L GD+++ + P P+ ICKR+ ALP E H L++ T +PKGH+W+EGDN S DS+ YGP+P+GL GR VVR+ PF T P ++ Sbjct: 58 SMEPNIRSHDILFTEHISPRTGNLSRGDIIVARSPTNPSTFICKRIVALP-EDHLLQADGTLQHVPKGHIWIEGDNVDNSTDSRNYGPIPMGLVRGRAVVRVWPFVDATFLAPPKSD 173
BLAST of 1500034j20rik protein vs. nr
Match: gi|954271133|gb|KRX63426.1| (Mitochondrial inner membrane protease subunit 1 [Trichinella sp. T9] >gi|954271135|gb|KRX63428.1| Mitochondrial inner membrane protease subunit 1 [Trichinella sp. T9]) HSP 1 Score: 99.3673 bits (246), Expect = 1.467e-23 Identity = 53/126 (42.06%), Postives = 70/126 (55.56%), Query Frame = 0 Query: 13 TIVC-GSILYTTNTCLVSAWWLSEDSMEPTFRDGQLVLAQPWPWCGPLVS-GDVLILKHPQTPAMRICKRVKALPGETHPLESTKTIPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAP 136 TIVC G + Y N S SMEPT RDG++ + + S GDV++ P+ P+ ICKRV A+ GE P + I GHVW+EGDN S S DS+ YG VP L +G+V+ R+ P Sbjct: 27 TIVCSGCVFYVFNEQFYSVTICKGSSMEPTIRDGEMFIVKSLASQTKTTSRGDVVVAISPEEPSTFICKRVVAVEGEPQPSHEFRRIRTGHVWLEGDNKSFSRDSRHYGDVPFALLKGKVIYRIWP 152
BLAST of 1500034j20rik protein vs. nr
Match: gi|954349884|gb|KRY22578.1| (Mitochondrial inner membrane protease subunit 1, partial [Trichinella patagoniensis]) HSP 1 Score: 99.7525 bits (247), Expect = 3.328e-23 Identity = 53/126 (42.06%), Postives = 70/126 (55.56%), Query Frame = 0 Query: 13 TIVC-GSILYTTNTCLVSAWWLSEDSMEPTFRDGQLVLAQPWPWCGPLVS-GDVLILKHPQTPAMRICKRVKALPGETHPLESTKTIPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAP 136 TIVC G + Y N S SMEPT RDG++ + + S GDV++ P+ P+ ICKRV A+ GE P + I GHVW+EGDN S S DS+ YG VP L +G+V+ R+ P Sbjct: 67 TIVCSGCVFYVFNEQFYSVTICKGSSMEPTIRDGEMFIVKSLASQTKTTSRGDVVVAISPEEPSTFICKRVVAVEGEPQPSHEFRQIRTGHVWLEGDNKSFSRDSRHYGDVPFALLKGKVIYRIWP 192
BLAST of 1500034j20rik protein vs. nr
Match: gi|954389685|gb|KRY52349.1| (Mitochondrial inner membrane protease subunit 1, partial [Trichinella britovi]) HSP 1 Score: 99.7525 bits (247), Expect = 3.364e-23 Identity = 53/126 (42.06%), Postives = 70/126 (55.56%), Query Frame = 0 Query: 13 TIVC-GSILYTTNTCLVSAWWLSEDSMEPTFRDGQLVLAQPWPWCGPLVS-GDVLILKHPQTPAMRICKRVKALPGETHPLESTKTIPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAP 136 TIVC G + Y N S SMEPT RDG++ + + S GDV++ P+ P+ ICKRV A+ GE P + I GHVW+EGDN S S DS+ YG VP L +G+V+ R+ P Sbjct: 67 TIVCSGCVFYVFNEQFYSVTICKGSSMEPTIRDGEMFIVKSLASQTKTTSRGDVVVAISPEEPSTFICKRVVAIEGEPQPSHEFRRIRTGHVWLEGDNKSFSRDSRHYGDVPFALLKGKVIYRIWP 192
BLAST of 1500034j20rik protein vs. nr
Match: gi|1228406274|ref|XP_021962299.1| (mitochondrial inner membrane protease subunit 1-like [Folsomia candida] >gi|1215257793|gb|OXA44121.1| Mitochondrial inner membrane protease subunit 1 [Folsomia candida]) HSP 1 Score: 98.9821 bits (245), Expect = 4.466e-23 Identity = 54/125 (43.20%), Postives = 74/125 (59.20%), Query Frame = 0 Query: 17 GSILYTTNTCLVSAWWLSEDSMEPTFRDGQLVLAQPW-PWCGPLVSGDVLILKHPQTPAMRICKRVKALPGETHPLEST---KTIPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAPF 137 G IL+ T + S SMEP R+ ++ + P G L GD++I + P P +CKRV ALPG+ H L++ K IPKGH+W+EGDN+ S DS+ YGP+PIGL GR ++RL P Sbjct: 58 GIILHCTFEYVGDFVICSGPSMEPNIRNHDILFTEHISPKMGTLNRGDIIIARSPSNPCQFVCKRVVALPGD-HLLQTDGNLKHIPKGHIWIEGDNSPNSTDSRMYGPIPIGLVRGRAILRLWPL 181
BLAST of 1500034j20rik protein vs. nr
Match: gi|954595378|gb|KRZ72564.1| (Mitochondrial inner membrane protease subunit 1 [Trichinella papuae]) HSP 1 Score: 97.8265 bits (242), Expect = 5.816e-23 Identity = 55/138 (39.86%), Postives = 74/138 (53.62%), Query Frame = 0 Query: 1 MKSWTLGRFLRHTIVC-GSILYTTNTCLVSAWWLSEDSMEPTFRDGQLVLAQPWPWCGPLVS-GDVLILKHPQTPAMRICKRVKALPGETHPLESTKTIPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAP 136 M+ G L TIVC G + Y N S SMEPT DG+L + + S GDV++ P+ P++ ICKRV A+ GE P + I GHVW+EGDN + S DS+ YG VP L +G+V+ R+ P Sbjct: 7 MEVLKQGLKLFGTIVCSGCVFYVFNEQFYSLTICKGSSMEPTIHDGELFIVKSLASQTKTTSRGDVVVAISPEEPSIFICKRVVAIEGEPQPSHEYRRIRTGHVWLEGDNKNFSRDSRHYGDVPFALLKGKVIYRIWP 144
BLAST of 1500034j20rik protein vs. nr
Match: gi|686620155|ref|XP_009287133.1| (PREDICTED: mitochondrial inner membrane protease subunit 1 isoform X3 [Aptenodytes forsteri]) HSP 1 Score: 97.4413 bits (241), Expect = 9.502e-23 Identity = 56/146 (38.36%), Postives = 79/146 (54.11%), Query Frame = 0 Query: 8 RFLRHTIVCGSILYTTNTCLVSAWWLSEDSMEPTFRDGQLVLAQPWP---WCGPLVSGDVLILKHPQTPAMRICKRVKALPGE----THP---LESTKTIPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAPFATETAW 143 RFL +T+ G I + L S SMEPT ++ +V ++ +C + GD++I+K P P +ICKRV L G+ ++P L+S +PKGHVW+EGDN S DS+ YGPVP GL GR+ + A A W Sbjct: 11 RFLGYTVQYGCIAHCAFEYLGGIVVCSGPSMEPTIQNSDIVFSENLSRHFYC--IRKGDIVIVKSPNDPKSKICKRVIGLEGDKVCTSNPSDFLKSHSYVPKGHVWLEGDNLRNSTDSRCYGPVPYGLIRGRICFKKAAKAPSVLW 154
BLAST of 1500034j20rik protein vs. nr
Match: gi|954307533|gb|KRX95514.1| (Mitochondrial inner membrane protease subunit 1 [Trichinella pseudospiralis] >gi|954307535|gb|KRX95516.1| Mitochondrial inner membrane protease subunit 1 [Trichinella pseudospiralis] >gi|954307536|gb|KRX95517.1| Mitochondrial inner membrane protease subunit 1 [Trichinella pseudospiralis] >gi|954307537|gb|KRX95518.1| Mitochondrial inner membrane protease subunit 1 [Trichinella pseudospiralis]) HSP 1 Score: 96.2857 bits (238), Expect = 2.049e-22 Identity = 55/138 (39.86%), Postives = 74/138 (53.62%), Query Frame = 0 Query: 1 MKSWTLGRFLRHTIVC-GSILYTTNTCLVSAWWLSEDSMEPTFRDGQLVLAQPWPWCGPLVS-GDVLILKHPQTPAMRICKRVKALPGETHPLESTKTIPKGHVWVEGDNTSRSMDSKTYGPVPIGLTEGRVVVRLAP 136 M+ G L TIVC G + Y N S SMEPT DG+L++ + S GDV++ P+ P++ ICKRV A+ GE P + I GHVW+EGDN S DS+ YG VP L +G+V+ R+ P Sbjct: 13 MEILKQGLKLFGTIVCSGCVFYVFNEQFYSITLCKGSSMEPTIHDGELLIVKSLVSQTKTTSRGDVVVAISPEEPSIFICKRVVAVEGEPQPSHEYRRIRTGHVWLEGDNKRFSRDSRHYGDVPFALLKGKVIYRIWP 150 The following BLAST results are available for this feature:
BLAST of 1500034j20rik protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of 1500034j20rik protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 12
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BLAST of 1500034j20rik protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold139_size317827:135746..136356+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold139_size317827-processed-gene-1.7 ID=snap_masked-scaffold139_size317827-processed-gene-1.7|Name=1500034j20rik protein|organism=Tigriopus kingsejongensis|type=gene|length=611bp|location=Sequence derived from alignment at scaffold139_size317827:135746..136356+ (Tigriopus kingsejongensis)back to top Synonyms
The feature '1500034j20rik protein' has the following synonyms
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