histone h2a, snap_masked-scaffold1689_size31069-processed-gene-0.0 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of histone h2a vs. L. salmonis genes
Match: EMLSAG00000011020 (supercontig:LSalAtl2s:LSalAtl2s741:230720:233818:-1 gene:EMLSAG00000011020 transcript:EMLSAT00000011020 description:"snap_masked-LSalAtl2s741-processed-gene-2.19") HSP 1 Score: 81.6481 bits (200), Expect = 1.165e-21 Identity = 43/69 (62.32%), Postives = 48/69 (69.57%), Query Frame = 0 Query: 54 VMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQASLLPKKSAQ 122 + YL EVLEL GN KKT II HLQLAIR D+EL KLL+GVTIA G+L NIQA LLPKK + Sbjct: 16 IQTYLTHEVLELPGNY----KKTHIIHCHLQLAIRRDKELKKLLAGVTIAHCGILHNIQAVLLPKKKTE 80
BLAST of histone h2a vs. L. salmonis genes
Match: EMLSAG00000012218 (supercontig:LSalAtl2s:LSalAtl2s887:424407:426072:-1 gene:EMLSAG00000012218 transcript:EMLSAT00000012218 description:"snap-LSalAtl2s887-processed-gene-4.11") HSP 1 Score: 66.2402 bits (160), Expect = 8.318e-16 Identity = 32/44 (72.73%), Postives = 35/44 (79.55%), Query Frame = 0 Query: 35 RKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 78 RKGNYAERVG+ A VYL AVME +A E+LEL NAARDNKK I Sbjct: 16 RKGNYAERVGSDALVYLVAVMECIAPELLELTSNAARDNKKICI 59
BLAST of histone h2a vs. L. salmonis genes
Match: EMLSAG00000003961 (supercontig:LSalAtl2s:LSalAtl2s2120:1961:2668:-1 gene:EMLSAG00000003961 transcript:EMLSAT00000003961 description:"snap-LSalAtl2s2120-processed-gene-0.8") HSP 1 Score: 63.5438 bits (153), Expect = 1.692e-14 Identity = 27/49 (55.10%), Postives = 38/49 (77.55%), Query Frame = 0 Query: 16 SRSNRAGLQFPVGRIHRILRKGNYAERVGAGAPVYLAAVMEYLAAEVLE 64 S S+R LQF IHR++RK NY ER+G+GAPVY+ A++EY+ AE+L+ Sbjct: 44 SCSSRTALQFLAVYIHRLVRKDNYIERLGSGAPVYIEALLEYIGAEILQ 92
BLAST of histone h2a vs. L. salmonis genes
Match: EMLSAG00000000432 (supercontig:LSalAtl2s:LSalAtl2s1068:354081:357686:1 gene:EMLSAG00000000432 transcript:EMLSAT00000000432 description:"snap_masked-LSalAtl2s1068-processed-gene-3.12") HSP 1 Score: 58.9214 bits (141), Expect = 5.661e-13 Identity = 33/69 (47.83%), Postives = 41/69 (59.42%), Query Frame = 0 Query: 8 GKTKGKAKSRSNRAGLQFPVGRIHRILRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKT 76 GK +GK + RAGLQFPV RIHR+LRKGNY +A M+YL A+V+ R+NKKT Sbjct: 12 GKIRGKETYCAIRAGLQFPVRRIHRLLRKGNY------------SATMKYLTAQVMY----CCRNNKKT 64
BLAST of histone h2a vs. L. salmonis genes
Match: EMLSAG00000011210 (supercontig:LSalAtl2s:LSalAtl2s764:15439:16885:-1 gene:EMLSAG00000011210 transcript:EMLSAT00000011210 description:"snap-LSalAtl2s764-processed-gene-0.19") HSP 1 Score: 44.669 bits (104), Expect = 2.096e-7 Identity = 24/37 (64.86%), Postives = 27/37 (72.97%), Query Frame = 0 Query: 79 IPRH---LQLAIRNDEELNKLLSGVTIAQGGVLPNIQ 112 IP+ L LAI DEEL+KL +GV IAQ GVLPNIQ Sbjct: 5 IPKRSCCLSLAIYKDEELSKLKAGVRIAQSGVLPNIQ 41
BLAST of histone h2a vs. SwissProt
Match: gi|122044770|sp|P02269.2|H2A_ASTRU (RecName: Full=Histone H2A) HSP 1 Score: 226.483 bits (576), Expect = 6.716e-77 Identity = 112/124 (90.32%), Postives = 118/124 (95.16%), Query Frame = 0 Query: 1 MSGRGKGGKTKGKAKSRSNRAGLQFPVGRIHRILRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQASLLPKKSAQGA 124 MSGRGKGGK + KAKSRS+RAGLQFPVGR+HR LRKGNYAERVGAGAPVYLAAVMEYLAAE+LELAGNAARDNKKTRI PRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQA LLPKK+A+ A Sbjct: 1 MSGRGKGGKARAKAKSRSSRAGLQFPVGRVHRFLRKGNYAERVGAGAPVYLAAVMEYLAAEILELAGNAARDNKKTRINPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTAKAA 124
BLAST of histone h2a vs. SwissProt
Match: gi|121993|sp|P27661.2|H2AX_MOUSE (RecName: Full=Histone H2AX; Short=H2a/x; AltName: Full=Histone H2A.X) HSP 1 Score: 222.631 bits (566), Expect = 4.747e-75 Identity = 116/143 (81.12%), Postives = 124/143 (86.71%), Query Frame = 0 Query: 1 MSGRGK-GGKTKGKAKSRSNRAGLQFPVGRIHRILRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQASLLPKKSAQGAGAKA-----GAKTNSQEY 137 MSGRGK GGK + KAKSRS+RAGLQFPVGR+HR+LRKG+YAERVGAGAPVYLAAV+EYL AE+LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQA LLPKKS+ G KA A SQEY Sbjct: 1 MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKSSATVGPKAPAVGKKASQASQEY 143
BLAST of histone h2a vs. SwissProt
Match: gi|121992|sp|P16104.2|H2AX_HUMAN (RecName: Full=Histone H2AX; Short=H2a/x; AltName: Full=Histone H2A.X) HSP 1 Score: 221.09 bits (562), Expect = 1.501e-74 Identity = 115/143 (80.42%), Postives = 124/143 (86.71%), Query Frame = 0 Query: 1 MSGRGK-GGKTKGKAKSRSNRAGLQFPVGRIHRILRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQASLLPKKSAQGAGAKA-----GAKTNSQEY 137 MSGRGK GGK + KAKSRS+RAGLQFPVGR+HR+LRKG+YAERVGAGAPVYLAAV+EYL AE+LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQA LLPKK++ G KA A SQEY Sbjct: 1 MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTSATVGPKAPSGGKKATQASQEY 143
BLAST of histone h2a vs. SwissProt
Match: gi|121966|sp|P06897.2|H2A1_XENLA (RecName: Full=Histone H2A type 1) HSP 1 Score: 219.935 bits (559), Expect = 3.686e-74 Identity = 108/129 (83.72%), Postives = 119/129 (92.25%), Query Frame = 0 Query: 1 MSGRGK-GGKTKGKAKSRSNRAGLQFPVGRIHRILRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQASLLPKKSAQGAGAKA 128 MSGRGK GGKT+ KAK+RS+RAGLQFPVGR+HR+LRKGNYAERVGAGAPVYLAAV+EYL AE+LELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLL GVTIAQGGVLPNIQ+ LLPKK+ AK+ Sbjct: 1 MSGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKKTESAKSAKS 129
BLAST of histone h2a vs. SwissProt
Match: gi|121987|sp|P16886.2|H2AL_STRPU (RecName: Full=Late histone H2A.L3) HSP 1 Score: 219.164 bits (557), Expect = 5.973e-74 Identity = 108/125 (86.40%), Postives = 118/125 (94.40%), Query Frame = 0 Query: 1 MSGRGKG-GKTKGKAKSRSNRAGLQFPVGRIHRILRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQASLLPKKSAQGA 124 MSGRGKG GK + KAKSRS RAGLQFPVGR+HR LRKGNYA+RVGAGAPVYLAAV+EYLAAE+LELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLSGVTIAQGGVLPNIQA LLPKK+++ + Sbjct: 1 MSGRGKGAGKARAKAKSRSARAGLQFPVGRVHRFLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTSKAS 125
BLAST of histone h2a vs. SwissProt
Match: gi|122004|sp|P02264.2|H2A_ONCMY (RecName: Full=Histone H2A) HSP 1 Score: 218.009 bits (554), Expect = 1.656e-73 Identity = 108/128 (84.38%), Postives = 118/128 (92.19%), Query Frame = 0 Query: 1 MSGRGK-GGKTKGKAKSRSNRAGLQFPVGRIHRILRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQASLLPKKSAQGAGAK 127 MSGRGK GGK + KAK+RS+RAGLQFPVGR+HR+LRKGNYAERVGAGAPVYLAAV+EYL AE+LELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLL GVTIAQGGVLPNIQA LLPKK+ + AK Sbjct: 1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTEKAVKAK 128
BLAST of histone h2a vs. SwissProt
Match: gi|73919746|sp|Q6GM86.3|H2AX_XENLA (RecName: Full=Histone H2AX; Short=H2a/x; AltName: Full=Histone H2A.X) HSP 1 Score: 217.238 bits (552), Expect = 4.644e-73 Identity = 111/140 (79.29%), Postives = 125/140 (89.29%), Query Frame = 0 Query: 1 MSGRGKG-GKTKGKAKSRSNRAGLQFPVGRIHRILRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQASLLPKKSAQGAGAKAGAKTN--SQEY 137 MSGRGK KT+ KAK+RS+RAGLQFPVGR+HR+LRKGNYA RVGAGAPVYLAAV+EYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLL GVTIAQGGVLPNIQA LLPKKS+ G + +G K++ SQEY Sbjct: 1 MSGRGKAVSKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAHRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKSSGGV-STSGKKSSQQSQEY 139
BLAST of histone h2a vs. SwissProt
Match: gi|73919733|sp|Q7ZUY3.3|H2AX_DANRE (RecName: Full=Histone H2AX; Short=H2a/x; AltName: Full=Histone H2A.X) HSP 1 Score: 217.238 bits (552), Expect = 5.785e-73 Identity = 107/123 (86.99%), Postives = 116/123 (94.31%), Query Frame = 0 Query: 1 MSGRGK-GGKTKGKAKSRSNRAGLQFPVGRIHRILRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQASLLPKKSAQ 122 MSGRGK GGK + KAK+RS+RAGLQFPVGR+HR+LRKGNYAERVGAGAPVYLAAV+EYL AE+LELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLL GVTIAQGGVLPNIQA LLPKK+ Q Sbjct: 1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTGQ 123
BLAST of histone h2a vs. SwissProt
Match: gi|74750623|sp|Q8IUE6.3|H2A2B_HUMAN (RecName: Full=Histone H2A type 2-B) HSP 1 Score: 216.083 bits (549), Expect = 1.001e-72 Identity = 107/121 (88.43%), Postives = 115/121 (95.04%), Query Frame = 0 Query: 1 MSGRGK-GGKTKGKAKSRSNRAGLQFPVGRIHRILRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQASLLPKKS 120 MSGRGK GGK + KAKSRS+RAGLQFPVGR+HR+LRKGNYAERVGAGAPVYLAAV+EYL AE+LELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLL GVTIAQGGVLPNIQA LLPKK+ Sbjct: 1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 121
BLAST of histone h2a vs. SwissProt
Match: gi|74752099|sp|Q96QV6.3|H2A1A_HUMAN (RecName: Full=Histone H2A type 1-A; AltName: Full=Histone H2A/r) HSP 1 Score: 215.698 bits (548), Expect = 1.421e-72 Identity = 106/121 (87.60%), Postives = 115/121 (95.04%), Query Frame = 0 Query: 1 MSGRGK-GGKTKGKAKSRSNRAGLQFPVGRIHRILRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQASLLPKKS 120 MSGRGK GGK + K+KSRS+RAGLQFPVGRIHR+LRKGNYAER+GAGAPVYLAAV+EYL AE+LELAGNA+RDNKKTRIIPRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQA LLPKK+ Sbjct: 1 MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLTAEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 121
BLAST of histone h2a vs. nr
Match: gi|1207973022|ref|XP_021377317.1| (histone H2A [Mizuhopecten yessoensis] >gi|1205887989|gb|OWF38953.1| Histone H2A [Mizuhopecten yessoensis]) HSP 1 Score: 235.343 bits (599), Expect = 8.920e-78 Identity = 119/137 (86.86%), Postives = 126/137 (91.97%), Query Frame = 0 Query: 1 MSGRGKGGKTKGKAKSRSNRAGLQFPVGRIHRILRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQASLLPKKSAQGAGAKAGAKTNSQEY 137 MSGRGKGGKTK KAKSRS+RAGLQFPVGRIHR+LRKGNYAERVGAGAPVYLAAV+EYLAAEVLELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQA LLPKK+ GA G + SQE+ Sbjct: 1 MSGRGKGGKTKSKAKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT----GATKGKSSQSQEF 133
BLAST of histone h2a vs. nr
Match: gi|805823518|ref|XP_012151724.1| (PREDICTED: histone H2A-like [Megachile rotundata]) HSP 1 Score: 233.417 bits (594), Expect = 4.003e-77 Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0 Query: 1 MSGRGKGGKTKGKAKSRSNRAGLQFPVGRIHRILRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQASLLPKKS 120 MSGRGKGGK KGKAKSRSNRAGLQFPVGRIHR+LRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQA LLPKK+ Sbjct: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of histone h2a vs. nr
Match: gi|1214569827|gb|ASJ26422.1| (Histone H2A [Pieris rapae]) HSP 1 Score: 233.417 bits (594), Expect = 4.275e-77 Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0 Query: 1 MSGRGKGGKTKGKAKSRSNRAGLQFPVGRIHRILRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQASLLPKKS 120 MSGRGKGGK KGKAKSRSNRAGLQFPVGRIHR+LRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQA LLPKK+ Sbjct: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of histone h2a vs. nr
Match: gi|1339929068|gb|POS83062.1| (histone H2A [Erysiphe pulchra]) HSP 1 Score: 233.417 bits (594), Expect = 4.322e-77 Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0 Query: 1 MSGRGKGGKTKGKAKSRSNRAGLQFPVGRIHRILRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQASLLPKKS 120 MSGRGKGGK KGKAKSRSNRAGLQFPVGRIHR+LRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQA LLPKK+ Sbjct: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of histone h2a vs. nr
Match: gi|157674605|gb|ABV60391.1| (histone H2A [Artemia franciscana]) HSP 1 Score: 233.802 bits (595), Expect = 4.334e-77 Identity = 120/137 (87.59%), Postives = 126/137 (91.97%), Query Frame = 0 Query: 1 MSGRGKGGKTKGKAKSRSNRAGLQFPVGRIHRILRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQASLLPKKSAQGAGAKAGAKTNSQEY 137 M+GRGKGGKTK K+KSRS RAGLQFPVGRIHR+L+KGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQA LLPKK A+GA AKA SQEY Sbjct: 1 MTGRGKGGKTKAKSKSRSGRAGLQFPVGRIHRMLKKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK-AEGASAKAKGGGQSQEY 136
BLAST of histone h2a vs. nr
Match: gi|1189073698|ref|XP_020804711.1| (histone H2A-like [Drosophila serrata]) HSP 1 Score: 233.032 bits (593), Expect = 4.467e-77 Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0 Query: 1 MSGRGKGGKTKGKAKSRSNRAGLQFPVGRIHRILRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQASLLPKKS 120 MSGRGKGGK KGKAKSRSNRAGLQFPVGRIHR+LRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQA LLPKK+ Sbjct: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of histone h2a vs. nr
Match: gi|805790453|ref|XP_012141737.1| (PREDICTED: histone H2A-like [Megachile rotundata]) HSP 1 Score: 233.032 bits (593), Expect = 5.266e-77 Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0 Query: 1 MSGRGKGGKTKGKAKSRSNRAGLQFPVGRIHRILRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQASLLPKKS 120 MSGRGKGGK KGKAKSRSNRAGLQFPVGRIHR+LRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQA LLPKK+ Sbjct: 1 MSGRGKGGKAKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of histone h2a vs. nr
Match: gi|780616284|ref|XP_011697044.1| (PREDICTED: histone H2A-like [Wasmannia auropunctata]) HSP 1 Score: 233.032 bits (593), Expect = 5.502e-77 Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0 Query: 1 MSGRGKGGKTKGKAKSRSNRAGLQFPVGRIHRILRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQASLLPKKS 120 MSGRGKGGK KGKAKSRSNRAGLQFPVGRIHR+LRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQA LLPKK+ Sbjct: 1 MSGRGKGGKIKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of histone h2a vs. nr
Match: gi|1228362961|ref|XP_021968072.1| (histone H2A-like [Folsomia candida]) HSP 1 Score: 233.032 bits (593), Expect = 6.559e-77 Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0 Query: 1 MSGRGKGGKTKGKAKSRSNRAGLQFPVGRIHRILRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQASLLPKKS 120 MSGRGKGGK KGKAKSRS+RAGLQFPVGRIHR+LRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQA LLPKKS Sbjct: 1 MSGRGKGGKVKGKAKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKS 120
BLAST of histone h2a vs. nr
Match: gi|242003146|ref|XP_002422628.1| (histone H2A [Pediculus humanus corporis] >gi|242020968|ref|XP_002430919.1| histone H2A [Pediculus humanus corporis] >gi|212505429|gb|EEB09890.1| histone H2A [Pediculus humanus corporis] >gi|212516137|gb|EEB18181.1| histone H2A [Pediculus humanus corporis]) HSP 1 Score: 232.646 bits (592), Expect = 7.817e-77 Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0 Query: 1 MSGRGKGGKTKGKAKSRSNRAGLQFPVGRIHRILRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQASLLPKKS 120 MSGRGKGGK KGKAKSRSNRAGLQFPVGRIHR+LRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQA LLPKK+ Sbjct: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120 The following BLAST results are available for this feature:
BLAST of histone h2a vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 15
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BLAST of histone h2a vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of histone h2a vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1689_size31069:6805..7284+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold1689_size31069-processed-gene-0.0 ID=snap_masked-scaffold1689_size31069-processed-gene-0.0|Name=histone h2a|organism=Tigriopus kingsejongensis|type=gene|length=480bp|location=Sequence derived from alignment at scaffold1689_size31069:6805..7284+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'histone h2a' has the following synonyms
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