40s ribosomal protein s7, snap_masked-scaffold186_size273091-processed-gene-1.11 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 40s ribosomal protein s7 vs. L. salmonis genes
Match: EMLSAG00000006461 (supercontig:LSalAtl2s:LSalAtl2s353:308961:310825:1 gene:EMLSAG00000006461 transcript:EMLSAT00000006461 description:"augustus_masked-LSalAtl2s353-processed-gene-2.5") HSP 1 Score: 209.149 bits (531), Expect = 1.059e-70 Identity = 102/133 (76.69%), Postives = 115/133 (86.47%), Query Frame = 0 Query: 1 MAFASRAKIIKPTSDEPDEFEKSISQALLELEINSDLKAQLRELHITGAKEVEVGGKKAIVIFVPVPQLKAFQKVQARLVRELEKKFSGRHVVFIAQRRILPKPTRKANKLKQKRPRSRTLMAVHSAILDDLV 133 M FA+R KIIK ++PDE EK +SQA+L+LE+NSDLKA LREL+IT KE+EVG KKA VIFVPVPQLKAFQK+Q RLVRELEKKF+G HVVF+AQRRILPKPTRKANKLKQKRPRSR L + HS ILDDLV Sbjct: 1 MTFANRIKIIKANLEDPDELEKKVSQAILDLELNSDLKAPLRELYITAVKEIEVGDKKAYVIFVPVPQLKAFQKIQPRLVRELEKKFNGTHVVFVAQRRILPKPTRKANKLKQKRPRSRXLTSXHSCILDDLV 133
BLAST of 40s ribosomal protein s7 vs. L. salmonis genes
Match: EMLSAG00000003752 (supercontig:LSalAtl2s:LSalAtl2s201:265551:269976:-1 gene:EMLSAG00000003752 transcript:EMLSAT00000003752 description:"snap-LSalAtl2s201-processed-gene-2.24") HSP 1 Score: 51.9878 bits (123), Expect = 3.562e-9 Identity = 21/35 (60.00%), Postives = 28/35 (80.00%), Query Frame = 0 Query: 134 YPAEIVGKRIRIRLDGSRLFKVHLDKSQQTNIEHK 168 + I+GKR RI LDGSRLF++HL+K+QQ+N EH Sbjct: 34 WSTLILGKRTRIHLDGSRLFQIHLNKNQQSNSEHN 68
BLAST of 40s ribosomal protein s7 vs. SwissProt
Match: gi|75186300|sp|Q9M885.1|RS72_ARATH (RecName: Full=40S ribosomal protein S7-2) HSP 1 Score: 159.073 bits (401), Expect = 1.218e-48 Identity = 81/169 (47.93%), Postives = 124/169 (73.37%), Query Frame = 0 Query: 3 FASRAKIIKPTSDEPDEFEKSISQALLELE-INSDLKAQLRELHITGAKEVEV-GGKKAIVIFVPVPQLKAFQKVQARLVRELEKKFSGRHVVFIAQRRILPKPTRKANKLKQKRPRSRTLMAVHSAILDDLVYPAEIVGKRIRIRLDGSRLFKVHLDKSQQTNIEHKV 169 ++ + KI K P EFE+ ++QAL +LE N +LK++L++L+I A ++++ G +KA+VI+VP KAF+K+ RLVRELEKKFSG+ V+F+A RRI+ +P +K + ++ RPR+RTL +VH A+L+D+ YPAEIVGKR R RLDG+++ KV LD + + E+K+ Sbjct: 2 YSGQNKIHKDKGVAPTEFEEQVTQALFDLENTNQELKSELKDLYINQAVQMDISGNRKAVVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVIFVATRRIM-RPPKKGSAVQ--RPRNRTLTSVHEAMLEDVAYPAEIVGKRTRYRLDGTKIMKVFLDSKLKNDTEYKL 167
BLAST of 40s ribosomal protein s7 vs. SwissProt
Match: gi|20139962|sp|Q9XH45.1|RS7_BRAOL (RecName: Full=40S ribosomal protein S7) HSP 1 Score: 158.303 bits (399), Expect = 1.764e-48 Identity = 80/169 (47.34%), Postives = 124/169 (73.37%), Query Frame = 0 Query: 3 FASRAKIIKPTSDEPDEFEKSISQALLELE-INSDLKAQLRELHITGAKEVEV-GGKKAIVIFVPVPQLKAFQKVQARLVRELEKKFSGRHVVFIAQRRILPKPTRKANKLKQKRPRSRTLMAVHSAILDDLVYPAEIVGKRIRIRLDGSRLFKVHLDKSQQTNIEHKV 169 F+++ KI K P EFE+ ++QA +LE N +LK+ L++L+I A +++ G +KA+VI+VP KAF+K+ +RLVRELEKKFSG V+F+A RRI+ +P +K + ++ RPR+RTL +VH A+L+D+ YPAEIVGKR R R+DG+++ KV+L+ ++ N E+K+ Sbjct: 2 FSAQNKIHKDKGVAPTEFEERVAQAFFDLENTNQELKSDLKDLYINQAVSMDIAGNRKAVVIYVPFRLRKAFRKIHSRLVRELEKKFSGNDVIFVATRRIM-RPPKKGSAVQ--RPRNRTLTSVHEAMLEDVAYPAEIVGKRTRYRVDGTKIMKVYLEPKERNNTEYKL 167
BLAST of 40s ribosomal protein s7 vs. SwissProt
Match: gi|49036478|sp|Q9XET4.1|RS7_SECCE (RecName: Full=40S ribosomal protein S7) HSP 1 Score: 158.303 bits (399), Expect = 2.141e-48 Identity = 83/170 (48.82%), Postives = 121/170 (71.18%), Query Frame = 0 Query: 3 FASRAKIIKPTSDEPDEFEKSISQALLELEI-NSDLKAQLRELHITGAKEVEV-GGKKAIVIFVPVPQLKAFQKVQARLVRELEKKFSGRHVVFIAQRRILPKPTRKANKLKQKRPRSRTLMAVHSAILDDLVYPAEIVGKRIRIRLDGSRLFKVHLDKSQQTNIEHKVS 170 + +R KI K EP EFE +++QA +LE N +LK+ +++L+I A +++V G +KA+VI VP K F+K+ RLVRELEKKFSG+ VV +A RRI+ +P +K + + RPR+RTL AVH +L+D+VYPAEIVGKR+R RLDGS++ K+ LD ++ N E+K+ Sbjct: 2 YTARKKIQKDKGLEPSEFEDTVAQAFFDLENGNQELKSDVKDLYINAAFQMDVAGNRKAVVIHVPYRLRKNFRKIHVRLVRELEKKFSGKDVVIVATRRIV-RPPKKGSAVV--RPRTRTLTAVHDGLLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPMERNNTEYKLD 168
BLAST of 40s ribosomal protein s7 vs. SwissProt
Match: gi|75168875|sp|Q9C514.1|RS71_ARATH (RecName: Full=40S ribosomal protein S7-1) HSP 1 Score: 156.762 bits (395), Expect = 8.935e-48 Identity = 84/169 (49.70%), Postives = 122/169 (72.19%), Query Frame = 0 Query: 3 FASRAKIIKPTSDEPDEFEKSISQALLELE-INSDLKAQLRELHITGAKEVEV-GGKKAIVIFVPVPQLKAFQKVQARLVRELEKKFSGRHVVFIAQRRILPKPTRKANKLKQKRPRSRTLMAVHSAILDDLVYPAEIVGKRIRIRLDGSRLFKVHLDKSQQTNIEHKV 169 F+++ KI K E E ++ ++QA +LE N +LK++L++L++ A +V++ GG+KAIV+ VP KA++K+ RLVRELEKKFSG+ V+ IA RRI+ +P +K + KRPR+RTL +VH AILDD+V PAEIVGKR R RLDG+++ KV LD ++ N E+KV Sbjct: 2 FSAQHKIHKEKGVELSELDEQVAQAFFDLENTNQELKSELKDLYVNSAVQVDISGGRKAIVVNVPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRIV-RPPKKGSA--AKRPRNRTLTSVHEAILDDVVLPAEIVGKRTRYRLDGTKIMKVFLDPKERNNTEYKV 167
BLAST of 40s ribosomal protein s7 vs. SwissProt
Match: gi|49036474|sp|Q949H0.1|RS7_HORVU (RecName: Full=40S ribosomal protein S7) HSP 1 Score: 154.066 bits (388), Expect = 1.057e-46 Identity = 82/169 (48.52%), Postives = 122/169 (72.19%), Query Frame = 0 Query: 3 FASRAKIIKPTSDEPDEFEKSISQALLELEI-NSDLKAQLRELHITGAKEVEV-GGKKAIVIFVPVPQLKAFQKVQARLVRELEKKFSGRHVVFIAQRRILPKPTRKANKLKQKRPRSRTLMAVHSAILDDLVYPAEIVGKRIRIRLDGSRLFKVHLDKSQQTNIEHKV 169 + +R KI K EP EFE +++QA +LE N +LK+ L++L+I A +++V G +KA+VI VP K F+K+ RLVRELE+ SG+ VVF+A RRI+ +P +K + ++ RPR+RTL AVH IL+D+VYPAEIVGKR+R RLDG+++ K++LD ++ N E+K+ Sbjct: 2 YTARKKIQKDKGVEPSEFEDTVAQAFFDLENGNQELKSDLKDLYINTAIQMDVVGNRKAVVIHVPYRLRKPFRKIHVRLVRELER-VSGKDVVFVATRRIV-RPPKKGSAVQ--RPRTRTLTAVHDGILEDVVYPAEIVGKRVRYRLDGAKVIKIYLDPKERNNTEYKL 166
BLAST of 40s ribosomal protein s7 vs. nr
Match: gi|1207946525|ref|XP_021363112.1| (40S ribosomal protein S7-like [Mizuhopecten yessoensis] >gi|1205895935|gb|OWF45754.1| 40S ribosomal protein S7 [Mizuhopecten yessoensis]) HSP 1 Score: 272.322 bits (695), Expect = 6.642e-91 Identity = 131/169 (77.51%), Postives = 154/169 (91.12%), Query Frame = 0 Query: 3 FASRAKIIKPTSDEPDEFEKSISQALLELEINSDLKAQLRELHITGAKEVEVGGKKAIVIFVPVPQLKAFQKVQARLVRELEKKFSGRHVVFIAQRRILPKPTRKA-NKLKQKRPRSRTLMAVHSAILDDLVYPAEIVGKRIRIRLDGSRLFKVHLDKSQQTNIEHKVS 170 +++ AKIIKP ++PD+FE+S+SQALLELE+NSDLKAQLREL+I+GAKE++V GKKAI+IFVPVPQL+ +QK+Q RLVRELEKKFSG+HVVFIAQRRILPKPTRK K KQKRPRSRTL AVH +ILDDL +PAEIVGKRIRI+LDGSRL KVHLDK+QQTNIEHK+ Sbjct: 2 YSASAKIIKPQGEKPDDFEQSVSQALLELEMNSDLKAQLRELYISGAKEIDVAGKKAIIIFVPVPQLRQYQKIQTRLVRELEKKFSGKHVVFIAQRRILPKPTRKTRRKNKQKRPRSRTLTAVHDSILDDLTFPAEIVGKRIRIKLDGSRLIKVHLDKTQQTNIEHKMD 170
BLAST of 40s ribosomal protein s7 vs. nr
Match: gi|847126681|ref|XP_012818133.1| (PREDICTED: 40S ribosomal protein S7 isoform X1 [Xenopus tropicalis] >gi|847126683|ref|XP_012818134.1| PREDICTED: 40S ribosomal protein S7 isoform X1 [Xenopus tropicalis]) HSP 1 Score: 272.322 bits (695), Expect = 8.289e-91 Identity = 134/169 (79.29%), Postives = 154/169 (91.12%), Query Frame = 0 Query: 3 FASRAKIIKPTSDEPDEFEKSISQALLELEINSDLKAQLRELHITGAKEVEVGG-KKAIVIFVPVPQLKAFQKVQARLVRELEKKFSGRHVVFIAQRRILPKPTRKA-NKLKQKRPRSRTLMAVHSAILDDLVYPAEIVGKRIRIRLDGSRLFKVHLDKSQQTNIEHKV 169 F++ AKI+KP ++PDEFE ISQALLELE+NSDLKAQLREL+IT AKE+EVGG +KAI+IFVPVPQLK+FQK+Q RLVRELEKKFSG+HVVFIAQRRILPKPTRK+ K KQKRPRSRTL AVH AIL+DLVYP+EIVGKRIR++LDGSRL KVHLDK+QQ N+EHKV Sbjct: 2 FSTSAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVYPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 170
BLAST of 40s ribosomal protein s7 vs. nr
Match: gi|158187702|gb|ABW23140.1| (ribosomal protein rps7 [Arenicola marina]) HSP 1 Score: 271.552 bits (693), Expect = 1.372e-90 Identity = 135/168 (80.36%), Postives = 152/168 (90.48%), Query Frame = 0 Query: 3 FASRAKIIKPTSDEPDEFEKSISQALLELEINSDLKAQLRELHITGAKEVEVGGKKAIVIFVPVPQLKAFQKVQARLVRELEKKFSGRHVVFIAQRRILPKPTRKA-NKLKQKRPRSRTLMAVHSAILDDLVYPAEIVGKRIRIRLDGSRLFKVHLDKSQQTNIEHKV 169 F+ RAKIIKP ++PDEFE SISQALLELE NSDLKA+LRELHITGAKEVEV GKKAI++FVPVPQLKA+QK+Q RLVRELEKK+SG+HVVFIAQRRILPKPTRK+ K KQKRPRSRTL AVH IL+DL +PAEIVGKRIRI+LDGSRL KV LDK++QTNIEHK+ Sbjct: 4 FSERAKIIKPPGEKPDEFESSISQALLELETNSDLKAKLRELHITGAKEVEVMGKKAIIVFVPVPQLKAYQKIQNRLVRELEKKYSGKHVVFIAQRRILPKPTRKSRTKSKQKRPRSRTLTAVHDNILEDLCFPAEIVGKRIRIKLDGSRLIKVLLDKNEQTNIEHKL 171
BLAST of 40s ribosomal protein s7 vs. nr
Match: gi|1069354454|ref|XP_018117191.1| (PREDICTED: 40S ribosomal protein S7 isoform X2 [Xenopus laevis]) HSP 1 Score: 271.937 bits (694), Expect = 1.373e-90 Identity = 133/169 (78.70%), Postives = 154/169 (91.12%), Query Frame = 0 Query: 3 FASRAKIIKPTSDEPDEFEKSISQALLELEINSDLKAQLRELHITGAKEVEVG-GKKAIVIFVPVPQLKAFQKVQARLVRELEKKFSGRHVVFIAQRRILPKPTRKA-NKLKQKRPRSRTLMAVHSAILDDLVYPAEIVGKRIRIRLDGSRLFKVHLDKSQQTNIEHKV 169 F++ AKI+KP ++PDEFE ISQALLELE+NSDLKAQLREL+IT AKE+EVG G+KAI+IFVPVPQLK+FQK+Q RLVRELEKKFSG+HVVFIAQRRILPKPTRK+ K KQKRPRSRTL AVH AIL+DLVYP+EIVG+RIR++LDGSRL KVHLDK+QQ N+EHKV Sbjct: 13 FSTSAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGAGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVYPSEIVGRRIRVKLDGSRLIKVHLDKAQQNNVEHKV 181
BLAST of 40s ribosomal protein s7 vs. nr
Match: gi|553727215|ref|NP_001272941.1| (40S ribosomal protein S7 [Anolis carolinensis]) HSP 1 Score: 271.552 bits (693), Expect = 1.386e-90 Identity = 134/169 (79.29%), Postives = 154/169 (91.12%), Query Frame = 0 Query: 3 FASRAKIIKPTSDEPDEFEKSISQALLELEINSDLKAQLRELHITGAKEVEV-GGKKAIVIFVPVPQLKAFQKVQARLVRELEKKFSGRHVVFIAQRRILPKPTRKA-NKLKQKRPRSRTLMAVHSAILDDLVYPAEIVGKRIRIRLDGSRLFKVHLDKSQQTNIEHKV 169 F+S AKI+KP ++PDEFE ISQALLELE+NSDLKAQLREL+IT AKE+EV GG+KAI+IFVPVPQLK+FQK+Q RLVRELEKKFSG+HVVFIAQRRILPKPTRK+ K KQKRPRSRTL AVH AIL+DLV+P+EIVGKRIR++LDGSRL KVHLDK+QQ N+EHKV Sbjct: 2 FSSSAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVSGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 170 The following BLAST results are available for this feature:
BLAST of 40s ribosomal protein s7 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of 40s ribosomal protein s7 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of 40s ribosomal protein s7 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold186_size273091:272503..273235+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold186_size273091-processed-gene-1.11 ID=snap_masked-scaffold186_size273091-processed-gene-1.11|Name=40s ribosomal protein s7|organism=Tigriopus kingsejongensis|type=gene|length=733bp|location=Sequence derived from alignment at scaffold186_size273091:272503..273235+ (Tigriopus kingsejongensis)back to top Synonyms
The feature '40s ribosomal protein s7' has the following synonyms
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