broad-complex core protein isoform 6, snap_masked-scaffold186_size273091-processed-gene-1.16 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of broad-complex core protein isoform 6 vs. L. salmonis genes
Match: EMLSAG00000006827 (supercontig:LSalAtl2s:LSalAtl2s385:122699:145346:1 gene:EMLSAG00000006827 transcript:EMLSAT00000006827 description:"maker-LSalAtl2s385-augustus-gene-1.13") HSP 1 Score: 110.538 bits (275), Expect = 2.221e-27 Identity = 49/118 (41.53%), Postives = 80/118 (67.80%), Query Frame = 0 Query: 10 MGSDNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD 127 M S+ FCLKWN+++SNI ++ ++ + +F DVTLSC+ I+AHKVIL+ACS +FR V + P ++P+I LK +L +++ ++Y G+ ++QE L+ FL+ A L +KGL + Sbjct: 1 MTSEQFCLKWNNYQSNIVSALGNLKLDEDFVDVTLSCE--GRTIKAHKVILSACSLYFRDVFRETPCNHPIIILKDTQYSDLESLVKYVYQGQXYISQENLSSFLKTADALQIKGLAE 116
BLAST of broad-complex core protein isoform 6 vs. L. salmonis genes
Match: EMLSAG00000007481 (supercontig:LSalAtl2s:LSalAtl2s42:537429:544881:1 gene:EMLSAG00000007481 transcript:EMLSAT00000007481 description:"maker-LSalAtl2s42-augustus-gene-5.9") HSP 1 Score: 108.997 bits (271), Expect = 8.727e-27 Identity = 52/120 (43.33%), Postives = 76/120 (63.33%), Query Frame = 0 Query: 10 MGSDN-FCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTDG 128 MG++ FCLKWN+ S I + F + E DVTL+ + + ++AHKVIL+ACSP+FR + +PVIY++ VD NL A++ +MY GE NV Q L F+R A+ L ++GL +G Sbjct: 1 MGTEQQFCLKWNNHRSTILSVFDTLLEEESLVDVTLTAE--GQFLRAHKVILSACSPYFRIMFRAANEKHPVIYMQNVDFENLKALVEYMYKGEANVPQHMLPSFIRTAESLQIRGLAEG 118
BLAST of broad-complex core protein isoform 6 vs. L. salmonis genes
Match: EMLSAG00000009238 (supercontig:LSalAtl2s:LSalAtl2s588:466746:467909:-1 gene:EMLSAG00000009238 transcript:EMLSAT00000009238 description:"snap_masked-LSalAtl2s588-processed-gene-4.20") HSP 1 Score: 105.145 bits (261), Expect = 5.535e-26 Identity = 65/160 (40.62%), Postives = 94/160 (58.75%), Query Frame = 0 Query: 14 NFCLKWNDFESNISTSFKEIRRESEFFDVTL-----SCDQANEQIQAHKVILAACSPFFRRVLNK--NP-HHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTDG----PKKTSTTESTPLGGGDK-----TKSLLKKTLQQ 156 N+CL+ ND+E + SF+ +R + F DVTL S D ++ +AH+VIL+ACS +F +L K +P H +PV+ L V +L+A+L+FMY G+VN+ E L+ FL VAQ L +KGL + PKK +T G K T S+L+ T QQ Sbjct: 19 NYCLRLNDYEKKYAESFRSLRDDESFADVTLVAGCSSEDDSSTSFKAHRVILSACSSYFHSLLIKTLSPWHVHPVLLLTDVRPRDLHALLDFMYLGQVNINNEALSSFLAVAQRLRIKGLCETTFQIPKKDPVYVATGHGKRAKFMTTTTSSVLRSTTQQ 178
BLAST of broad-complex core protein isoform 6 vs. L. salmonis genes
Match: EMLSAG00000002455 (supercontig:LSalAtl2s:LSalAtl2s1471:52173:56863:1 gene:EMLSAG00000002455 transcript:EMLSAT00000002455 description:"maker-LSalAtl2s1471-snap-gene-0.12") HSP 1 Score: 105.531 bits (262), Expect = 1.761e-25 Identity = 45/113 (39.82%), Postives = 77/113 (68.14%), Query Frame = 0 Query: 15 FCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD 127 +CL+WN+ + N+ + F+++ F DVTL+ + Q++AHK++L+ACSP+F+ +L P +P+++L+ V + A+L FMY GEV+V QE L+ L+VA+ L +KGL + Sbjct: 10 YCLRWNNHQHNLLSVFEDLLNHEAFVDVTLAVEGL--QLKAHKMVLSACSPYFQSMLYNTPDRHPIVFLRDVRYSEMKALLEFMYRGEVSVDQENLSSLLKVAEGLKIKGLAE 120
BLAST of broad-complex core protein isoform 6 vs. L. salmonis genes
Match: EMLSAG00000001443 (supercontig:LSalAtl2s:LSalAtl2s1246:233521:243037:1 gene:EMLSAG00000001443 transcript:EMLSAT00000001443 description:"maker-LSalAtl2s1246-augustus-gene-1.25") HSP 1 Score: 103.99 bits (258), Expect = 6.636e-25 Identity = 48/111 (43.24%), Postives = 72/111 (64.86%), Query Frame = 0 Query: 15 FCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGL 125 + LKWNDF N++++F+++ +F DVTL+C + ++AHKVIL++ S +FR +L P +P+I LK +A+L F Y GEVNVAQE L FL +A+ +KGL Sbjct: 8 YSLKWNDFTVNVASTFRDLHSRHDFVDVTLACADGS-TLEAHKVILSSVSTYFRDILKTTPCKHPIIILKDXGRDEASAMLEFAYTGEVNVAQELLQSFLHMAKSFRIKGL 117
BLAST of broad-complex core protein isoform 6 vs. SwissProt
Match: gi|73621174|sp|Q7KRI2.1|LOLAL_DROME (RecName: Full=Longitudinals lacking protein-like; Short=Lola-like protein; AltName: Full=Protein Batman) HSP 1 Score: 133.65 bits (335), Expect = 1.105e-37 Identity = 63/122 (51.64%), Postives = 87/122 (71.31%), Query Frame = 0 Query: 9 IMGSDN-FCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTDGP 129 +M SD F LKWNDF++N+ TSF+ +R E F DVTL+C+ + +AHK++L+ACSP+F+ +L +NP +P+I LK V +L AIL FMY GEVNV+QE+L FL+ A L VKGL + P Sbjct: 1 MMSSDQQFFLKWNDFQTNMVTSFRHLRDEKSFTDVTLACE--GQTCKAHKMVLSACSPYFKALLEENPSKHPIIILKDVSYIHLQAILEFMYAGEVNVSQEQLPAFLKTADRLKVKGLAETP 120
BLAST of broad-complex core protein isoform 6 vs. SwissProt
Match: gi|27923726|sp|Q24174.2|ABRU_DROME (RecName: Full=Protein abrupt; AltName: Full=Protein clueless) HSP 1 Score: 126.331 bits (316), Expect = 5.028e-31 Identity = 55/113 (48.67%), Postives = 81/113 (71.68%), Query Frame = 0 Query: 15 FCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD 127 + LKWNDF+S+I +SF+ +R E +F DVTL+CD+ AHKV+L+ACSP+FRR+L NP +P++ L+ V ++ +L+FMY GEVNV+ E+L FL+ A L ++GL D Sbjct: 78 YALKWNDFQSSILSSFRHLRDEEDFVDVTLACDE--RSFTAHKVVLSACSPYFRRLLKANPCEHPIVILRDVRCDDVENLLSFMYNGEVNVSHEQLPDFLKTAHLLQIRGLAD 188
BLAST of broad-complex core protein isoform 6 vs. SwissProt
Match: gi|13123979|sp|Q24206.2|BRC4_DROME (RecName: Full=Broad-complex core protein isoform 6) HSP 1 Score: 121.324 bits (303), Expect = 3.071e-29 Identity = 52/115 (45.22%), Postives = 85/115 (73.91%), Query Frame = 0 Query: 12 SDNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLT 126 + +FCL+WN+++S+I+++F+ +R + F DVTL+C+ I+AH+V+L+ACSP+FR +L P +PVI L+ V+ +L+A++ F+Y+GEVNV Q+ L FL+ A+ L V GLT Sbjct: 4 TQHFCLRWNNYQSSITSAFENLRDDEAFVDVTLACE--GRSIKAHRVVLSACSPYFRELLKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLT 116
BLAST of broad-complex core protein isoform 6 vs. SwissProt
Match: gi|13124701|sp|Q01295.2|BRC1_DROME (RecName: Full=Broad-complex core protein isoforms 1/2/3/4/5) HSP 1 Score: 120.553 bits (301), Expect = 4.689e-29 Identity = 52/112 (46.43%), Postives = 83/112 (74.11%), Query Frame = 0 Query: 15 FCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLT 126 FCL+WN+++S+I+++F+ +R + F DVTL+C+ I+AH+V+L+ACSP+FR +L P +PVI L+ V+ +L+A++ F+Y+GEVNV Q+ L FL+ A+ L V GLT Sbjct: 7 FCLRWNNYQSSITSAFENLRDDEAFVDVTLACE--GRSIKAHRVVLSACSPYFRELLKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLT 116
BLAST of broad-complex core protein isoform 6 vs. SwissProt
Match: gi|29428067|sp|Q9W0K4.2|BAB2_DROME (RecName: Full=Protein bric-a-brac 2) HSP 1 Score: 117.472 bits (293), Expect = 6.204e-28 Identity = 51/125 (40.80%), Postives = 83/125 (66.40%), Query Frame = 0 Query: 3 PRGSGPIMGSDNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD 127 P G G FCL+WN+++SN++ F E+ + F DVTLSC+ I+AHK++L+ACSP+F+ + NP +P+I ++ V +L A++ FMY GE+NV Q+++N L+VA+ L ++GL + Sbjct: 191 PSGEG-----QQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCE--GHSIKAHKMVLSACSPYFQALFYDNPCQHPIIIMRDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAE 308
BLAST of broad-complex core protein isoform 6 vs. SwissProt
Match: gi|29428068|sp|Q9W0K7.2|BAB1_DROME (RecName: Full=Protein bric-a-brac 1) HSP 1 Score: 116.316 bits (290), Expect = 1.569e-27 Identity = 47/113 (41.59%), Postives = 83/113 (73.45%), Query Frame = 0 Query: 15 FCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD 127 FCL+WN++++N++T F ++ + F DVTL+CD ++AHK++L+ACSP+F+ +L + P +P++ ++ V+ +L AI+ FMY GE+NV+Q+++ LR+A+ L V+GL D Sbjct: 102 FCLRWNNYQTNLTTIFDQLLQNECFVDVTLACD--GRSMKAHKMVLSACSPYFQTLLAETPCQHPIVIMRDVNWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLAD 212
BLAST of broad-complex core protein isoform 6 vs. SwissProt
Match: gi|47117851|sp|P42282.3|TTKA_DROME (RecName: Full=Protein tramtrack, alpha isoform; AltName: Full=Repressor protein fushi tarazu; AltName: Full=Tramtrack p88) HSP 1 Score: 115.546 bits (288), Expect = 2.812e-27 Identity = 50/118 (42.37%), Postives = 80/118 (67.80%), Query Frame = 0 Query: 10 MGSDNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD 127 M S FCL+WN+ +SN+ + F ++ F DVTL+ + + ++AHK++L+ACSP+F + +P +P++ LK V ++ ++L+FMY GEV+V QE L FLRVA+ L +KGLT+ Sbjct: 3 MASQRFCLRWNNHQSNLLSVFDQLLHAETFTDVTLAVE--GQHLKAHKMVLSACSPYFNTLFVSHPEKHPIVILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLTE 118
BLAST of broad-complex core protein isoform 6 vs. SwissProt
Match: gi|20455517|sp|P17789.2|TTKB_DROME (RecName: Full=Protein tramtrack, beta isoform; AltName: Full=Repressor protein fushi tarazu; AltName: Full=Tramtrack p69) HSP 1 Score: 114.775 bits (286), Expect = 4.252e-27 Identity = 50/118 (42.37%), Postives = 80/118 (67.80%), Query Frame = 0 Query: 10 MGSDNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD 127 M S FCL+WN+ +SN+ + F ++ F DVTL+ + + ++AHK++L+ACSP+F + +P +P++ LK V ++ ++L+FMY GEV+V QE L FLRVA+ L +KGLT+ Sbjct: 3 MASQRFCLRWNNHQSNLLSVFDQLLHAETFTDVTLAVE--GQHLKAHKMVLSACSPYFNTLFVSHPEKHPIVILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLTE 118
BLAST of broad-complex core protein isoform 6 vs. SwissProt
Match: gi|33112291|sp|Q8IN81.1|FRU_DROME (RecName: Full=Sex determination protein fruitless) HSP 1 Score: 111.309 bits (277), Expect = 7.323e-26 Identity = 49/113 (43.36%), Postives = 74/113 (65.49%), Query Frame = 0 Query: 15 FCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD 127 FCL+WN+ +N++ + + DVTL+C+ E ++AH+ IL+ACSP+F + +N H +P+IYLK V + ++L+FMY GEVNV Q L FL+ A+ L V+GLTD Sbjct: 106 FCLRWNNHPTNLTGVLTSLLQREALCDVTLACE--GETVKAHQTILSACSPYFETIFLQNQHPHPIIYLKDVRYSEMRSLLDFMYKGEVNVGQSSLPMFLKTAESLQVRGLTD 216
BLAST of broad-complex core protein isoform 6 vs. SwissProt
Match: gi|73621294|sp|P14083.2|LOV_DROME (RecName: Full=Protein jim lovell; AltName: Full=Protein TKR; AltName: Full=Tyrosine kinase-related; Short=dTKR) HSP 1 Score: 103.99 bits (258), Expect = 1.997e-23 Identity = 54/150 (36.00%), Postives = 87/150 (58.00%), Query Frame = 0 Query: 8 PIMGSDNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTDG--PKKTSTTESTPLGGGDKTKSLLKKTLQ 155 P D++ L+WN+ +++I +F + + DVTL C A I+AHK++L+ACSPFF+RV + P +PVI LK + AI++FMY GE++V Q+ L ++ + L V+GL + P+ T T ++P G S+L T + Sbjct: 108 PSAPQDHYSLRWNNHQNHILRAFDALLKTKTLVDVTLVC--AETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFGMLDTSMLSSTFE 255
BLAST of broad-complex core protein isoform 6 vs. nr
Match: gi|1325315215|ref|XP_023339305.1| (broad-complex core protein-like isoform X30 [Eurytemora affinis]) HSP 1 Score: 192.2 bits (487), Expect = 1.710e-55 Identity = 117/315 (37.14%), Postives = 168/315 (53.33%), Query Frame = 0 Query: 10 MGSDNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD----GPKKTSTTESTPLGGGDKTKSLLKKT------------LQQNPLKGKNFADYYTRDSQGV---FWCKGCSLKTSSRRDLFRHIDAIHMN-------------TVYDCVICGKQFKAAYLLKLIGSTVADYVMRNAQGTYWCKGCGHHSSSRRDLQRHIEARHIS--GDYQCKYCEKSLTTKYNLQRHINKNHK 290 MG++ FCLKWNDFESNIS +F+EIR E +FFDVTL+CD ++Q+QAHKVIL+ACSPFFR +L +NPH +P++YLKGV +L ++LNFMY+GEVNVAQ+ELN FL VA+EL VKGLT KK ++ +P ++S +Q + ++ RD V + ++ TS++ L DA N T+ D + G K L+L +A + Y C CGH + + H+E++H Y+C+ C K+ TK + H + H+ Sbjct: 1 MGTEKFCLKWNDFESNISLAFREIRDEKDFFDVTLACD--DDQLQAHKVILSACSPFFRNILKRNPHQHPLLYLKGVKYSDLQSVLNFMYHGEVNVAQDELNSFLAVAEELRVKGLTQNNSGSTKKENSAPKSPPSKSRASESAAPAPKRPRPNPPAPAFIQDDDIQEVVPVKSEPRDIASVPSDPYSNNTAIATSNQHQLQTEEDAYEDNYEDYEGYDQSYDSTMMDPNMTGDGNKDPNELRL--DVLAGNYLEKTGIHYNCTVCGHPCRDKFAAKLHLESKHFPTVNGYECEICSKTFNTKNAFKIHKSMEHR 311
BLAST of broad-complex core protein isoform 6 vs. nr
Match: gi|1325315181|ref|XP_023339287.1| (protein tramtrack, beta isoform-like isoform X13 [Eurytemora affinis]) HSP 1 Score: 192.2 bits (487), Expect = 1.891e-55 Identity = 121/317 (38.17%), Postives = 165/317 (52.05%), Query Frame = 0 Query: 10 MGSDNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTDG---------------PKKTSTTESTPLGGGDKTKSLLKKTLQQN-------PLKGKNFADYYTRDSQGV---FWCKGCSLKTSSRRDLFRHIDAIHMN-------------TVYDCVICGKQFKAAYLLKLIGSTVADYVMRNAQGT--YWCKGCGHHSSSRRDLQRHIEARHIS--GDYQCKYCEKSLTTKYNLQRH 284 MG++ FCLKWNDFESNIS +F+EIR E +FFDVTL+CD ++Q+QAHKVIL+ACSPFFR +L +NPH +P++YLKGV +L ++LNFMY+GEVNVAQ+ELN FL VA+EL VKGLT P K+ +ES + Q+ P+K + RD V + ++ TS++ L DA N T+ D + G K L +L G Y+ RN+ G Y C+ C + H+E +H G Y C C K++ T+ L H Sbjct: 1 MGTEKFCLKWNDFESNISLAFREIRDEKDFFDVTLACD--DDQLQAHKVILSACSPFFRNILKRNPHQHPLLYLKGVKYSDLQSVLNFMYHGEVNVAQDELNSFLAVAEELRVKGLTQNNSGSTKKENSAPKSPPSKSRASESAAPAPKRPRPNPPAPAFIQDDDIQEVVPVKSE------PRDIASVPSDPYSNNTAIATSNQHQLQTEEDAYEDNYEDYEGYDQSYDSTMMDPNMTGDGNKGRTLEELAGI----YLKRNSSGIGGYTCQVCSKTLRDKYAATDHLECKHFPTYGGYSCNLCGKTMNTRNALTSH 305
BLAST of broad-complex core protein isoform 6 vs. nr
Match: gi|1325315201|ref|XP_023339298.1| (protein abrupt-like isoform X23 [Eurytemora affinis]) HSP 1 Score: 191.815 bits (486), Expect = 2.617e-55 Identity = 122/316 (38.61%), Postives = 172/316 (54.43%), Query Frame = 0 Query: 10 MGSDNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD----GPKKTSTTESTPLGGGDKTKSLLKKT------------LQQNPLKGKNFADYYTRDSQGV---FWCKGCSLKTSSRRDLFRHIDAIHMN-------------TVYDCVICGKQFKAAYLLKLIGSTVADYVMRNAQGTYWCKGCGHHSSSRRDLQRHIEARHI-SGDYQCKYCEKSLTTKYNLQRHINKNHKEE 292 MG++ FCLKWNDFESNIS +F+EIR E +FFDVTL+CD ++Q+QAHKVIL+ACSPFFR +L +NPH +P++YLKGV +L ++LNFMY+GEVNVAQ+ELN FL VA+EL VKGLT KK ++ +P ++S +Q + ++ RD V + ++ TS++ L DA N T+ D + G K L+L +T+ YV + G Y C CG R + H+EA HI S + C C K + TK H+++ H ++ Sbjct: 1 MGTEKFCLKWNDFESNISLAFREIRDEKDFFDVTLACD--DDQLQAHKVILSACSPFFRNILKRNPHQHPLLYLKGVKYSDLQSVLNFMYHGEVNVAQDELNSFLAVAEELRVKGLTQNNSGSTKKENSAPKSPPSKSRASESAAPAPKRPRPNPPAPAFIQDDDIQEVVPVKSEPRDIASVPSDPYSNNTAIATSNQHQLQTEEDAYEDNYEDYEGYDQSYDSTMMDPNMTGDGNKGMSHLEL-ETTLERYVEKIDMG-YSCTFCGKIVRDRTAARNHVEALHIPSQGHTCLVCGKLMKTKNAYWIHMSRIHNQK 312
BLAST of broad-complex core protein isoform 6 vs. nr
Match: gi|1325315235|ref|XP_023339316.1| (protein tramtrack, beta isoform-like isoform X40 [Eurytemora affinis]) HSP 1 Score: 191.43 bits (485), Expect = 2.851e-55 Identity = 118/321 (36.76%), Postives = 169/321 (52.65%), Query Frame = 0 Query: 10 MGSDNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTDG---------------PKKTSTTESTPLGGGDKTKSLLKKTLQQN-------PLKGKNFADYYTRDSQGV---FWCKGCSLKTSSRRDLFRHIDAIHMN-------------TVYDCVICGKQFKAAYLLKLIGSTVADYVMRNAQGTYWCKGCGHHSSSRRDLQRHIEARHISGD--YQCKYCEKSLTTKYNLQRHINKNHK 290 MG++ FCLKWNDFESNIS +F+EIR E +FFDVTL+CD ++Q+QAHKVIL+ACSPFFR +L +NPH +P++YLKGV +L ++LNFMY+GEVNVAQ+ELN FL VA+EL VKGLT P K+ +ES + Q+ P+K + RD V + ++ TS++ L DA N T+ D + G K + Y+ + G C CG S++ +L++H+E H G Y+C +C++ +T+ H+ + HK Sbjct: 1 MGTEKFCLKWNDFESNISLAFREIRDEKDFFDVTLACD--DDQLQAHKVILSACSPFFRNILKRNPHQHPLLYLKGVKYSDLQSVLNFMYHGEVNVAQDELNSFLAVAEELRVKGLTQNNSGSTKKENSAPKSPPSKSRASESAAPAPKRPRPNPPAPAFIQDDDIQEVVPVKSE------PRDIASVPSDPYSNNTAIATSNQHQLQTEEDAYEDNYEDYEGYDQSYDSTMMDPNMTGDGNKGVVDFGI-------YMEKLQPGGVKCTICGKISATSSNLKKHVENIHFPGSYVYKCDHCKEEFSTRNMYFLHMYRVHK 306
BLAST of broad-complex core protein isoform 6 vs. nr
Match: gi|1325267197|ref|XP_023340349.1| (broad-complex core protein isoforms 1/2/3/4/5-like isoform X13 [Eurytemora affinis]) HSP 1 Score: 191.045 bits (484), Expect = 3.506e-55 Identity = 126/314 (40.13%), Postives = 164/314 (52.23%), Query Frame = 0 Query: 10 MGS-DNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTDG-------PKKTSTTESTPLGGGDKTKSLLKKTLQQNPLKGKNFADYYTRDSQGVFWCKGCSLKTSSRRDLFRHI---------DAIHMNTV---------YDCVICGKQFKAAYLLKLIGSTVAD-------YVMRNAQGTYWCKGCGHHSSSRRDLQRHIEARHI-SGDYQCKYCEKSLTTKYNLQRHINKNH 289 MGS + FCL+WNDFESNIS +F+E+R E +FFDVTL+CD + Q+QAHKVIL+ACSPFFR +L KNPH +P++YLKGV L ++LNFMY GEVNVAQEELN FL VA+EL VKGLT P+ S + P +T KK P + D D Q V K S RD + D TV YD + +Y + +T AD +M QG + C CG S+ +++ H+EA+H+ S Y C C K TK +L H ++H Sbjct: 1 MGSSEKFCLRWNDFESNISVAFRELREEKDFFDVTLACDDS--QLQAHKVILSACSPFFRNILRKNPHQHPLLYLKGVKYKELVSVLNFMYMGEVNVAQEELNSFLSVAEELRVKGLTQNNSSDSAKPEPKSRSRDPP-----ETAPPAKKNRPSVPPPTPSQDD----DIQEVIPVK------SEPRDQPVPVSQELNHGYQDTGDQGTVALQENYPDDYDYEGYEGYDEGSYDPSTMQATGADGNKAALNRMMEKVQGGWQCSTCGFFSTYSTNMRNHVEAKHVTSQGYICPECSKWFKTKNSLNVHKQRSH 297 The following BLAST results are available for this feature:
BLAST of broad-complex core protein isoform 6 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of broad-complex core protein isoform 6 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of broad-complex core protein isoform 6 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold186_size273091:161131..167378- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold186_size273091-processed-gene-1.16 ID=snap_masked-scaffold186_size273091-processed-gene-1.16|Name=broad-complex core protein isoform 6|organism=Tigriopus kingsejongensis|type=gene|length=6248bp|location=Sequence derived from alignment at scaffold186_size273091:161131..167378- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'broad-complex core protein isoform 6' has the following synonyms
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