broad-complex core protein isoform 6, snap_masked-scaffold186_size273091-processed-gene-1.16 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of broad-complex core protein isoform 6 vs. L. salmonis genes
Match: EMLSAG00000006827 (supercontig:LSalAtl2s:LSalAtl2s385:122699:145346:1 gene:EMLSAG00000006827 transcript:EMLSAT00000006827 description:"maker-LSalAtl2s385-augustus-gene-1.13") HSP 1 Score: 110.538 bits (275), Expect = 2.221e-27 Identity = 49/118 (41.53%), Postives = 80/118 (67.80%), Query Frame = 0 Query: 10 MGSDNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD 127 M S+ FCLKWN+++SNI ++ ++ + +F DVTLSC+ I+AHKVIL+ACS +FR V + P ++P+I LK +L +++ ++Y G+ ++QE L+ FL+ A L +KGL + Sbjct: 1 MTSEQFCLKWNNYQSNIVSALGNLKLDEDFVDVTLSCE--GRTIKAHKVILSACSLYFRDVFRETPCNHPIIILKDTQYSDLESLVKYVYQGQXYISQENLSSFLKTADALQIKGLAE 116
BLAST of broad-complex core protein isoform 6 vs. L. salmonis genes
Match: EMLSAG00000007481 (supercontig:LSalAtl2s:LSalAtl2s42:537429:544881:1 gene:EMLSAG00000007481 transcript:EMLSAT00000007481 description:"maker-LSalAtl2s42-augustus-gene-5.9") HSP 1 Score: 108.997 bits (271), Expect = 8.727e-27 Identity = 52/120 (43.33%), Postives = 76/120 (63.33%), Query Frame = 0 Query: 10 MGSDN-FCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTDG 128 MG++ FCLKWN+ S I + F + E DVTL+ + + ++AHKVIL+ACSP+FR + +PVIY++ VD NL A++ +MY GE NV Q L F+R A+ L ++GL +G Sbjct: 1 MGTEQQFCLKWNNHRSTILSVFDTLLEEESLVDVTLTAE--GQFLRAHKVILSACSPYFRIMFRAANEKHPVIYMQNVDFENLKALVEYMYKGEANVPQHMLPSFIRTAESLQIRGLAEG 118
BLAST of broad-complex core protein isoform 6 vs. L. salmonis genes
Match: EMLSAG00000009238 (supercontig:LSalAtl2s:LSalAtl2s588:466746:467909:-1 gene:EMLSAG00000009238 transcript:EMLSAT00000009238 description:"snap_masked-LSalAtl2s588-processed-gene-4.20") HSP 1 Score: 105.145 bits (261), Expect = 5.535e-26 Identity = 65/160 (40.62%), Postives = 94/160 (58.75%), Query Frame = 0 Query: 14 NFCLKWNDFESNISTSFKEIRRESEFFDVTL-----SCDQANEQIQAHKVILAACSPFFRRVLNK--NP-HHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTDG----PKKTSTTESTPLGGGDK-----TKSLLKKTLQQ 156 N+CL+ ND+E + SF+ +R + F DVTL S D ++ +AH+VIL+ACS +F +L K +P H +PV+ L V +L+A+L+FMY G+VN+ E L+ FL VAQ L +KGL + PKK +T G K T S+L+ T QQ Sbjct: 19 NYCLRLNDYEKKYAESFRSLRDDESFADVTLVAGCSSEDDSSTSFKAHRVILSACSSYFHSLLIKTLSPWHVHPVLLLTDVRPRDLHALLDFMYLGQVNINNEALSSFLAVAQRLRIKGLCETTFQIPKKDPVYVATGHGKRAKFMTTTTSSVLRSTTQQ 178
BLAST of broad-complex core protein isoform 6 vs. L. salmonis genes
Match: EMLSAG00000002455 (supercontig:LSalAtl2s:LSalAtl2s1471:52173:56863:1 gene:EMLSAG00000002455 transcript:EMLSAT00000002455 description:"maker-LSalAtl2s1471-snap-gene-0.12") HSP 1 Score: 105.531 bits (262), Expect = 1.761e-25 Identity = 45/113 (39.82%), Postives = 77/113 (68.14%), Query Frame = 0 Query: 15 FCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD 127 +CL+WN+ + N+ + F+++ F DVTL+ + Q++AHK++L+ACSP+F+ +L P +P+++L+ V + A+L FMY GEV+V QE L+ L+VA+ L +KGL + Sbjct: 10 YCLRWNNHQHNLLSVFEDLLNHEAFVDVTLAVEGL--QLKAHKMVLSACSPYFQSMLYNTPDRHPIVFLRDVRYSEMKALLEFMYRGEVSVDQENLSSLLKVAEGLKIKGLAE 120
BLAST of broad-complex core protein isoform 6 vs. L. salmonis genes
Match: EMLSAG00000001443 (supercontig:LSalAtl2s:LSalAtl2s1246:233521:243037:1 gene:EMLSAG00000001443 transcript:EMLSAT00000001443 description:"maker-LSalAtl2s1246-augustus-gene-1.25") HSP 1 Score: 103.99 bits (258), Expect = 6.636e-25 Identity = 48/111 (43.24%), Postives = 72/111 (64.86%), Query Frame = 0 Query: 15 FCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGL 125 + LKWNDF N++++F+++ +F DVTL+C + ++AHKVIL++ S +FR +L P +P+I LK +A+L F Y GEVNVAQE L FL +A+ +KGL Sbjct: 8 YSLKWNDFTVNVASTFRDLHSRHDFVDVTLACADGS-TLEAHKVILSSVSTYFRDILKTTPCKHPIIILKDXGRDEASAMLEFAYTGEVNVAQELLQSFLHMAKSFRIKGL 117
BLAST of broad-complex core protein isoform 6 vs. SwissProt
Match: gi|75027304|sp|Q9VQ30.3|CHNMO_DROME (RecName: Full=Zinc finger protein chinmo; AltName: Full=Protein chronologically inappropriate morphogenesis) HSP 1 Score: 101.293 bits (251), Expect = 1.634e-22 Identity = 52/113 (46.02%), Postives = 69/113 (61.06%), Query Frame = 0 Query: 15 FCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNP-VIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLT 126 FCLKWN F SN++ +F + + DV LSCD +AHK+ILAACS F + P + VI L+ N+ A+L FMY GEV+V+QE LN FL+ A+ L VKGL+ Sbjct: 7 FCLKWNSFSSNLAITFSNLFKSDLLADVILSCDGV--VFKAHKLILAACSKKFADLFENTPTNGQCVIILEATTPDNMAALLEFMYKGEVHVSQEALNSFLKSAESLQVKGLS 117
BLAST of broad-complex core protein isoform 6 vs. SwissProt
Match: gi|73920225|sp|P42284.2|LOLA2_DROME (RecName: Full=Longitudinals lacking protein, isoforms H/M/V) HSP 1 Score: 97.8265 bits (242), Expect = 1.851e-21 Identity = 42/113 (37.17%), Postives = 72/113 (63.72%), Query Frame = 0 Query: 15 FCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD 127 FCL+WN+ +S + + F + D TL+ + + ++AHKV+L+ACSP+F +L + +P+ LK V L A++++MY GEVN++Q++L L+ A+ L +KGL+D Sbjct: 7 FCLRWNNHQSTLISVFDTLLENETLVDCTLAAE--GKFLKAHKVVLSACSPYFATLLQEQYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSD 117
BLAST of broad-complex core protein isoform 6 vs. SwissProt
Match: gi|73920874|sp|Q9V5M3.3|LOLA6_DROME (RecName: Full=Longitudinals lacking protein, isoforms N/O/W/X/Y) HSP 1 Score: 97.8265 bits (242), Expect = 2.593e-21 Identity = 42/113 (37.17%), Postives = 72/113 (63.72%), Query Frame = 0 Query: 15 FCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD 127 FCL+WN+ +S + + F + D TL+ + + ++AHKV+L+ACSP+F +L + +P+ LK V L A++++MY GEVN++Q++L L+ A+ L +KGL+D Sbjct: 7 FCLRWNNHQSTLISVFDTLLENETLVDCTLAAE--GKFLKAHKVVLSACSPYFATLLQEQYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSD 117
BLAST of broad-complex core protein isoform 6 vs. SwissProt
Match: gi|73920870|sp|Q7KQZ4.1|LOLA3_DROME (RecName: Full=Longitudinals lacking protein, isoforms A/B/D/L) HSP 1 Score: 97.8265 bits (242), Expect = 2.605e-21 Identity = 42/113 (37.17%), Postives = 72/113 (63.72%), Query Frame = 0 Query: 15 FCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD 127 FCL+WN+ +S + + F + D TL+ + + ++AHKV+L+ACSP+F +L + +P+ LK V L A++++MY GEVN++Q++L L+ A+ L +KGL+D Sbjct: 7 FCLRWNNHQSTLISVFDTLLENETLVDCTLAAE--GKFLKAHKVVLSACSPYFATLLQEQYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSD 117
BLAST of broad-complex core protein isoform 6 vs. SwissProt
Match: gi|73920872|sp|Q867Z4.1|LOLA4_DROME (RecName: Full=Longitudinals lacking protein, isoforms F/I/K/T) HSP 1 Score: 97.8265 bits (242), Expect = 2.944e-21 Identity = 42/113 (37.17%), Postives = 72/113 (63.72%), Query Frame = 0 Query: 15 FCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD 127 FCL+WN+ +S + + F + D TL+ + + ++AHKV+L+ACSP+F +L + +P+ LK V L A++++MY GEVN++Q++L L+ A+ L +KGL+D Sbjct: 7 FCLRWNNHQSTLISVFDTLLENETLVDCTLAAE--GKFLKAHKVVLSACSPYFATLLQEQYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSD 117
BLAST of broad-complex core protein isoform 6 vs. SwissProt
Match: gi|73920873|sp|Q9V5M6.4|LOLA5_DROME (RecName: Full=Longitudinals lacking protein, isoforms J/P/Q/S/Z) HSP 1 Score: 97.4413 bits (241), Expect = 3.195e-21 Identity = 42/113 (37.17%), Postives = 72/113 (63.72%), Query Frame = 0 Query: 15 FCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD 127 FCL+WN+ +S + + F + D TL+ + + ++AHKV+L+ACSP+F +L + +P+ LK V L A++++MY GEVN++Q++L L+ A+ L +KGL+D Sbjct: 7 FCLRWNNHQSTLISVFDTLLENETLVDCTLAAE--GKFLKAHKVVLSACSPYFATLLQEQYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSD 117
BLAST of broad-complex core protein isoform 6 vs. SwissProt
Match: gi|317373382|sp|P42283.2|LOLA1_DROME (RecName: Full=Longitudinals lacking protein, isoform G) HSP 1 Score: 97.4413 bits (241), Expect = 3.616e-21 Identity = 42/113 (37.17%), Postives = 72/113 (63.72%), Query Frame = 0 Query: 15 FCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD 127 FCL+WN+ +S + + F + D TL+ + + ++AHKV+L+ACSP+F +L + +P+ LK V L A++++MY GEVN++Q++L L+ A+ L +KGL+D Sbjct: 7 FCLRWNNHQSTLISVFDTLLENETLVDCTLAAE--GKFLKAHKVVLSACSPYFATLLQEQYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSD 117
BLAST of broad-complex core protein isoform 6 vs. SwissProt
Match: gi|46396378|sp|Q86B87.1|MMD4_DROME (RecName: Full=Modifier of mdg4) HSP 1 Score: 94.3597 bits (233), Expect = 3.329e-20 Identity = 43/116 (37.07%), Postives = 72/116 (62.07%), Query Frame = 0 Query: 13 DNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHH-NPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD 127 + F L WN+F +N+S F E + DV+L+ + + ++AH+++L+ CSPFFR++ + P + + +++L V L ++ FMY GEVNV Q+ L F+ A+ L +KGLTD Sbjct: 5 EQFSLCWNNFNTNLSAGFHESLCRGDLVDVSLAAE--GQIVKAHRLVLSVCSPFFRKMFTQMPSNTHAIVFLNNVSHSALKDLIQFMYCGEVNVKQDALPAFISTAESLQIKGLTD 118
BLAST of broad-complex core protein isoform 6 vs. SwissProt
Match: gi|83287912|sp|Q08605.2|GAGA_DROME (RecName: Full=Transcription factor GAGA; AltName: Full=Adh transcription factor 2; AltName: Full=GAGA factor; Short=GAF; AltName: Full=Neural conserved at 70F; AltName: Full=Trithorax-like protein) HSP 1 Score: 83.9593 bits (206), Expect = 8.955e-17 Identity = 38/111 (34.23%), Postives = 66/111 (59.46%), Query Frame = 0 Query: 15 FCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGL 125 + L W D+ +++ ++ + +R + D TL+ AHK++L A SPF +L P +PV+ L GV++++L A+L F+Y GEV+V +L L+ AQ L+++GL Sbjct: 9 YSLTWGDYGTSLVSAIQLLRCHGDLVDCTLAA--GGRSFPAHKIVLCAASPFLLDLLKNTPCKHPVVMLAGVNANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGL 117
BLAST of broad-complex core protein isoform 6 vs. SwissProt
Match: gi|82237396|sp|Q6P0F9.1|INS1A_DANRE (RecName: Full=Insulinoma-associated protein 1a; AltName: Full=Insulinoma-associated 1-like protein a; AltName: Full=Zinc finger protein IA-1a) HSP 1 Score: 61.2326 bits (147), Expect = 2.564e-9 Identity = 41/113 (36.28%), Postives = 54/113 (47.79%), Query Frame = 0 Query: 203 VYDCVICGKQFK-AAYLLKLIGS------TVADYVMRN--AQGTYWCKGCGHHSSSRRDLQRHIEARHISGDYQCKYCEKSLTTKYNLQRHINKNHKEENMRDKQLVSWPDQP 306 +YDC CGK+FK AYL K + + + N A + C CG + SR +RHI +H + Y CKYC + L RHINK H EN R L+ P +P Sbjct: 270 LYDCQHCGKKFKRQAYLKKHVTAHHDAPEKPQSHAPLNLSASECHLCPVCGENFPSRMSQERHIRLQHSAQVYPCKYCPAMFYSSPGLTRHINKCHPSEN-RQVILLQMPVRP 381
BLAST of broad-complex core protein isoform 6 vs. nr
Match: gi|1325315213|ref|XP_023339304.1| (protein abrupt-like isoform X29 [Eurytemora affinis]) HSP 1 Score: 204.142 bits (518), Expect = 3.627e-60 Identity = 125/323 (38.70%), Postives = 174/323 (53.87%), Query Frame = 0 Query: 10 MGSDNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTDG---------------PKKTSTTESTPLGGGDKTKSLLKKTLQQN-------PLKGKNFADYYTRDSQGV---FWCKGCSLKTSSRRDLFRHIDAIHMN-------------TVYDCVICGKQFKAAYLLKLIGSTVADYVM--RNAQGTYWCKGCGHHSSSRRDLQRHIEARHISGD--YQCKYCEKSLTTKYNLQRHINKNHK 290 MG++ FCLKWNDFESNIS +F+EIR E +FFDVTL+CD ++Q+QAHKVIL+ACSPFFR +L +NPH +P++YLKGV +L ++LNFMY+GEVNVAQ+ELN FL VA+EL VKGLT P K+ +ES + Q+ P+K + RD V + ++ TS++ L DA N T+ D + G K V +Y M R ++ C CG SS + +L++H+E +H G Y CKYC S +TK ++ HI++ H+ Sbjct: 1 MGTEKFCLKWNDFESNISLAFREIRDEKDFFDVTLACD--DDQLQAHKVILSACSPFFRNILKRNPHQHPLLYLKGVKYSDLQSVLNFMYHGEVNVAQDELNSFLAVAEELRVKGLTQNNSGSTKKENSAPKSPPSKSRASESAAPAPKRPRPNPPAPAFIQDDDIQEVVPVKSE------PRDIASVPSDPYSNNTAIATSNQHQLQTEEDAYEDNYEDYEGYDQSYDSTMMDPNMTGDGNKGE---------VYNYNMYIRRDGASHTCTLCGKTSSDKSNLRKHVEDKHFPGSQQYICKYCNTSYSTKNSMYSHISRFHR 306
BLAST of broad-complex core protein isoform 6 vs. nr
Match: gi|1325315219|ref|XP_023339307.1| (protein tramtrack, beta isoform-like isoform X32 [Eurytemora affinis]) HSP 1 Score: 202.216 bits (513), Expect = 2.040e-59 Identity = 124/320 (38.75%), Postives = 168/320 (52.50%), Query Frame = 0 Query: 10 MGSDNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTDG---------------PKKTSTTESTPLGGGDKTKSLLKKTLQQN-------PLKGKNFADYYTRDSQGV---FWCKGCSLKTSSRRDLFRHIDAIHMN-------------TVYDCVICGKQFKAAYLLKLIGSTVADYVMRNAQGTYWCKGCGHHSSSRRDLQRHIEARHISGDYQ--CKYCEKSLTTKYNLQRHINKNH 289 MG++ FCLKWNDFESNIS +F+EIR E +FFDVTL+CD ++Q+QAHKVIL+ACSPFFR +L +NPH +P++YLKGV +L ++LNFMY+GEVNVAQ+ELN FL VA+EL VKGLT P K+ +ES + Q+ P+K + RD V + ++ TS++ L DA N T+ D + G K S + Y+ R + C CG + +HIE H G Y CK+C +S T+ NL +HI+KNH Sbjct: 1 MGTEKFCLKWNDFESNISLAFREIRDEKDFFDVTLACD--DDQLQAHKVILSACSPFFRNILKRNPHQHPLLYLKGVKYSDLQSVLNFMYHGEVNVAQDELNSFLAVAEELRVKGLTQNNSGSTKKENSAPKSPPSKSRASESAAPAPKRPRPNPPAPAFIQDDDIQEVVPVKSE------PRDIASVPSDPYSNNTAIATSNQHQLQTEEDAYEDNYEDYEGYDQSYDSTMMDPNMTGDGNKG----DNPRSNFSSYIDRGDGSKFRCTLCGKEFKESGTVNKHIENIHFPGTYTYYCKFCPESFGTRNNLYKHISKNH 308
BLAST of broad-complex core protein isoform 6 vs. nr
Match: gi|1325315217|ref|XP_023339306.1| (broad-complex core protein-like isoform X31 [Eurytemora affinis]) HSP 1 Score: 201.445 bits (511), Expect = 3.421e-59 Identity = 124/320 (38.75%), Postives = 169/320 (52.81%), Query Frame = 0 Query: 10 MGSDNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTDG---------------PKKTSTTESTPLGGGDKTKSLLKKTLQQN-------PLKGKNFADYYTRDSQGV---FWCKGCSLKTSSRRDLFRHIDAIHMN-------------TVYDCVICGKQFKAAYLLKLIGSTVADYVMRNAQGTYWCKGCGHHSSSRRDLQRHIEARHISG--DYQCKYCEKSLTTKYNLQRHINKNH 289 MG++ FCLKWNDFESNIS +F+EIR E +FFDVTL+CD ++Q+QAHKVIL+ACSPFFR +L +NPH +P++YLKGV +L ++LNFMY+GEVNVAQ+ELN FL VA+EL VKGLT P K+ +ES + Q+ P+K + RD V + ++ TS++ L DA N T+ D + G K I ST + Y C CG +++R +L++H+E H G Y CK C TTK NL H+++ H Sbjct: 1 MGTEKFCLKWNDFESNISLAFREIRDEKDFFDVTLACD--DDQLQAHKVILSACSPFFRNILKRNPHQHPLLYLKGVKYSDLQSVLNFMYHGEVNVAQDELNSFLAVAEELRVKGLTQNNSGSTKKENSAPKSPPSKSRASESAAPAPKRPRPNPPAPAFIQDDDIQEVVPVKSE------PRDIASVPSDPYSNNTAIATSNQHQLQTEEDAYEDNYEDYEGYDQSYDSTMMDPNMTGDGNKGLDFGSYISST---------ESGYACTMCGKFATNRGNLKKHVENIHFPGFNQYICKQCGDLFTTKNNLNHHVSRVH 303
BLAST of broad-complex core protein isoform 6 vs. nr
Match: gi|1325315231|ref|XP_023339314.1| (protein abrupt-like isoform X38 [Eurytemora affinis]) HSP 1 Score: 201.445 bits (511), Expect = 4.168e-59 Identity = 124/318 (38.99%), Postives = 176/318 (55.35%), Query Frame = 0 Query: 10 MGSDNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD----GPKKTSTTESTPLGGGDKTKSLLKKT------------LQQNPLKGKNFADYYTRDSQGV---FWCKGCSLKTSSRRDLFRHIDAIHMN-------------TVYDCVICGKQFKAAYLLKLIGSTVADYVMRNAQGT-YWCKGCGHHSSSRRDLQRHIEARHI-SGDYQCKYCEKSLTTKYNLQRHINKNHKEEN 293 MG++ FCLKWNDFESNIS +F+EIR E +FFDVTL+CD ++Q+QAHKVIL+ACSPFFR +L +NPH +P++YLKGV +L ++LNFMY+GEVNVAQ+ELN FL VA+EL VKGLT KK ++ +P ++S +Q + ++ RD V + ++ TS++ L DA N T+ D + G K G V Y++++A G+ Y C CG + + + H+E++HI S Y C+ C K + TK LQ H+ + HK N Sbjct: 1 MGTEKFCLKWNDFESNISLAFREIRDEKDFFDVTLACD--DDQLQAHKVILSACSPFFRNILKRNPHQHPLLYLKGVKYSDLQSVLNFMYHGEVNVAQDELNSFLAVAEELRVKGLTQNNSGSTKKENSAPKSPPSKSRASESAAPAPKRPRPNPPAPAFIQDDDIQEVVPVKSEPRDIASVPSDPYSNNTAIATSNQHQLQTEEDAYEDNYEDYEGYDQSYDSTMMDPNMTGDGNK--------GPAVERYLVKSAVGSMYTCTLCGKVCADKSAGRNHLESKHIPSAGYNCEICSKFMHTKNALQIHMCRYHKNIN 308
BLAST of broad-complex core protein isoform 6 vs. nr
Match: gi|1325315167|ref|XP_023339279.1| (protein tramtrack, beta isoform-like isoform X6 [Eurytemora affinis]) HSP 1 Score: 201.445 bits (511), Expect = 4.311e-59 Identity = 121/314 (38.54%), Postives = 174/314 (55.41%), Query Frame = 0 Query: 10 MGSDNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD----GPKKTSTTESTPLGGGDKTKSLLKKT------------LQQNPLKGKNFADYYTRDSQGV---FWCKGCSLKTSSRRDLFRHIDAIHMN-------------TVYDCVICGKQFKAAYLLKLIGSTVADYVMRNAQGTYWCKGCGHHSSSRRDLQRHIEARHISG--DYQCKYCEKSLTTKYNLQRHINKNH 289 MG++ FCLKWNDFESNIS +F+EIR E +FFDVTL+CD ++Q+QAHKVIL+ACSPFFR +L +NPH +P++YLKGV +L ++LNFMY+GEVNVAQ+ELN FL VA+EL VKGLT KK ++ +P ++S +Q + ++ RD V + ++ TS++ L DA N T+ D + G K Y S + D++ +G Y C CG + + +L++H+E H G +Y CK C+K +T+ L H++K H Sbjct: 1 MGTEKFCLKWNDFESNISLAFREIRDEKDFFDVTLACD--DDQLQAHKVILSACSPFFRNILKRNPHQHPLLYLKGVKYSDLQSVLNFMYHGEVNVAQDELNSFLAVAEELRVKGLTQNNSGSTKKENSAPKSPPSKSRASESAAPAPKRPRPNPPAPAFIQDDDIQEVVPVKSEPRDIASVPSDPYSNNTAIATSNQHQLQTEEDAYEDNYEDYEGYDQSYDSTMMDPNMTGDGNKDLY------SYIEDHLDGLYRG-YRCMLCGKSAKDKGNLRKHVENIHFPGQFEYPCKICQKPFSTRNRLNHHVSKEH 305
BLAST of broad-complex core protein isoform 6 vs. nr
Match: gi|1325315227|ref|XP_023339311.1| (protein tramtrack, beta isoform-like isoform X36 [Eurytemora affinis]) HSP 1 Score: 201.06 bits (510), Expect = 4.576e-59 Identity = 122/320 (38.12%), Postives = 172/320 (53.75%), Query Frame = 0 Query: 10 MGSDNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTDG---------------PKKTSTTESTPLGGGDKTKSLLKKTLQQN-------PLKGKNFADYYTRDSQGV---FWCKGCSLKTSSRRDLFRHIDAIHMN-------------TVYDCVICGKQFKAAYLLKLIGSTVADYVMRNAQGTYWCKGCGHHSSSRRDLQRHIEARHISGD--YQCKYCEKSLTTKYNLQRHINKNH 289 MG++ FCLKWNDFESNIS +F+EIR E +FFDVTL+CD ++Q+QAHKVIL+ACSPFFR +L +NPH +P++YLKGV +L ++LNFMY+GEVNVAQ+ELN FL VA+EL VKGLT P K+ +ES + Q+ P+K + RD V + ++ TS++ L DA N T+ D + G K +L +Y+ R+ G Y C+ C H S ++ + H+E+RH D Y+C+ C K+ TK + H + +H Sbjct: 1 MGTEKFCLKWNDFESNISLAFREIRDEKDFFDVTLACD--DDQLQAHKVILSACSPFFRNILKRNPHQHPLLYLKGVKYSDLQSVLNFMYHGEVNVAQDELNSFLAVAEELRVKGLTQNNSGSTKKENSAPKSPPSKSRASESAAPAPKRPRPNPPAPAFIQDDDIQEVVPVKSE------PRDIASVPSDPYSNNTAIATSNQHQLQTEEDAYEDNYEDYEGYDQSYDSTMMDPNMTGDGNKDPNETRL-DELALNYLERDGLG-YMCRVCSHFSRNKNGAKLHLESRHFPTDNGYKCEICAKTFNTKNAFKSHKSTSH 310
BLAST of broad-complex core protein isoform 6 vs. nr
Match: gi|1325315233|ref|XP_023339315.1| (protein tramtrack, beta isoform-like isoform X39 [Eurytemora affinis]) HSP 1 Score: 199.904 bits (507), Expect = 1.475e-58 Identity = 126/322 (39.13%), Postives = 168/322 (52.17%), Query Frame = 0 Query: 10 MGSDNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTDG---------------PKKTSTTESTPLGGGDKTKSLLKKTLQQN-------PLKGKNFADYYTRDSQGV---FWCKGCSLKTSSRRDLFRHIDAIHMN-------------TVYDCVICGKQFKAAYLLKLIGSTVADYVMRNAQGT-YWCKGCGHHSSSRRDLQRHIEARHISGDYQ--CKYCEKSLTTKYNLQRHINKNHK 290 MG++ FCLKWNDFESNIS +F+EIR E +FFDVTL+CD ++Q+QAHKVIL+ACSPFFR +L +NPH +P++YLKGV +L ++LNFMY+GEVNVAQ+ELN FL VA+EL VKGLT P K+ +ES + Q+ P+K + RD V + ++ TS++ L DA N T+ D + G K A + A+Y R G CK CG S ++H+E H +Q CK+C+ S K L HI KNHK Sbjct: 1 MGTEKFCLKWNDFESNISLAFREIRDEKDFFDVTLACD--DDQLQAHKVILSACSPFFRNILKRNPHQHPLLYLKGVKYSDLQSVLNFMYHGEVNVAQDELNSFLAVAEELRVKGLTQNNSGSTKKENSAPKSPPSKSRASESAAPAPKRPRPNPPAPAFIQDDDIQEVVPVKSE------PRDIASVPSDPYSNNTAIATSNQHQLQTEEDAYEDNYEDYEGYDQSYDSTMMDPNMTGDGNKGA------TTNFAEYTERVGDGIRVLCKLCGKVYSDGSSAKKHVENIHFPDQFQYFCKFCDMSFGKKNLLYMHITKNHK 308
BLAST of broad-complex core protein isoform 6 vs. nr
Match: gi|1325315229|ref|XP_023339312.1| (protein abrupt-like isoform X37 [Eurytemora affinis]) HSP 1 Score: 199.134 bits (505), Expect = 3.539e-58 Identity = 120/314 (38.22%), Postives = 175/314 (55.73%), Query Frame = 0 Query: 10 MGSDNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD----GPKKTSTTESTPLGGGDKTKSLLKKT------------LQQNPLKGKNFADYYTRDSQGV---FWCKGCSLKTSSRRDLFRHIDAIHMN-------------TVYDCVICGKQFKAAYLLKLIGSTVADYVMRNAQGTYWCKGCGHHSSSRRDLQRHIEARHI-SGDYQCKYCEKSLTTKYNLQRHINKNHK 290 MG++ FCLKWNDFESNIS +F+EIR E +FFDVTL+CD ++Q+QAHKVIL+ACSPFFR +L +NPH +P++YLKGV +L ++LNFMY+GEVNVAQ+ELN FL VA+EL VKGLT KK ++ +P ++S +Q + ++ RD V + ++ TS++ L DA N T+ D + G K L+ + + +++ ++ G Y C+ CG H R ++ H+E+ H S + C C K L TK+ L +H ++ HK Sbjct: 1 MGTEKFCLKWNDFESNISLAFREIRDEKDFFDVTLACD--DDQLQAHKVILSACSPFFRNILKRNPHQHPLLYLKGVKYSDLQSVLNFMYHGEVNVAQDELNSFLAVAEELRVKGLTQNNSGSTKKENSAPKSPPSKSRASESAAPAPKRPRPNPPAPAFIQDDDIQEVVPVKSEPRDIASVPSDPYSNNTAIATSNQHQLQTEEDAYEDNYEDYEGYDQSYDSTMMDPNMTGDGNKGM-LVSDWEAIIDNFIEKSGTG-YLCRECGKHCQDRSAVRNHLESIHFPSQGHNCDLCGKFLRTKHALYKHKSRYHK 310
BLAST of broad-complex core protein isoform 6 vs. nr
Match: gi|1325315199|ref|XP_023339296.1| (protein tramtrack, beta isoform-like isoform X22 [Eurytemora affinis]) HSP 1 Score: 198.364 bits (503), Expect = 7.460e-58 Identity = 117/305 (38.36%), Postives = 162/305 (53.11%), Query Frame = 0 Query: 10 MGSDNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTD----GPKKTSTTESTPLGGGDKTKSLLKKT------------LQQNPLKGKNFADYYTRDSQGV---FWCKGCSLKTSSRRDLFRHIDAIHMN--------TVYDCVICGKQFKAAYLLKLIGSTVADYVMRNAQGTYWCKGCGHHSSSRRDLQRHIEARHI--SGDYQCKYCEKSLTTKYNLQRHI 285 MG++ FCLKWNDFESNIS +F+EIR E +FFDVTL+CD ++Q+QAHKVIL+ACSPFFR +L +NPH +P++YLKGV +L ++LNFMY+GEVNVAQ+ELN FL VA+EL VKGLT KK ++ +P ++S +Q + ++ RD V + ++ TS++ L DA N YD + + + Y+ R +G Y C CG + + + H+E RH G Y C C K + TK L HI Sbjct: 1 MGTEKFCLKWNDFESNISLAFREIRDEKDFFDVTLACD--DDQLQAHKVILSACSPFFRNILKRNPHQHPLLYLKGVKYSDLQSVLNFMYHGEVNVAQDELNSFLAVAEELRVKGLTQNNSGSTKKENSAPKSPPSKSRASESAAPAPKRPRPNPPAPAFIQDDDIQEVVPVKSEPRDIASVPSDPYSNNTAIATSNQHQLQTEEDAYEDNYEDYEGYDQSYDSTMMDPNMTGDGNKGDLDALAERYLTREQRGAYICSICGKLLRDKHNAKNHLECRHFPTEGGYSCIKCGKCMNTKNALNLHI 303
BLAST of broad-complex core protein isoform 6 vs. nr
Match: gi|1325315121|ref|XP_023339254.1| (protein tramtrack, beta isoform-like isoform X31 [Eurytemora affinis]) HSP 1 Score: 197.593 bits (501), Expect = 1.981e-57 Identity = 118/327 (36.09%), Postives = 171/327 (52.29%), Query Frame = 0 Query: 10 MGSDNFCLKWNDFESNISTSFKEIRRESEFFDVTLSCDQANEQIQAHKVILAACSPFFRRVLNKNPHHNPVIYLKGVDSHNLNAILNFMYYGEVNVAQEELNGFLRVAQELSVKGLTDGPKKTSTTESTPLGGGDKTKSLLKKTLQQN-------------------------------PLKGKNFADYYTRDSQGVFWCKGCSLKTSSRRD--LFRHIDAIHMNTVYDCVICGKQFKAAYLLKLIGSTVA------------DYVMRNAQGTYWCKGCGHHSSSRRDLQRHIEARHISGDYQCKYCEKSLTTKYNLQRHINKNHKE 291 MG++ FCLKWNDFESNIS +F+EIR E +FFDVTL+CD ++Q+QAHKVIL+ACSPFFR +L +NPH +P++YLKGV +L ++LNFMY+GEVNVAQ+ELN FL VA+EL VKGLT S P+ K+ +K + + P+K + RDS V G + SS + D + YD G+ +Y +++ ++A Y+ R + C CG + + + RH+E H G++ C +C K+ + +LQ H ++NHK+ Sbjct: 1 MGTEKFCLKWNDFESNISLAFREIRDEKDFFDVTLACD--DDQLQAHKVILSACSPFFRNILKRNPHQHPLLYLKGVKYSDLQSVLNFMYHGEVNVAQDELNSFLAVAEELRVKGLTQNNGSQSAKGREPVS---KSPPPIKSNARPSERDSGPPPKRPRPTPPTQITPPDDDDIQEVVPVKSE------PRDSSAVISTPGDMYQPSSNQQSLALTEEDDYGQDESYDDY--GQYGDGSYDGQMMDPSMAGGADGNKGRPLESYIGR-TDSDFQCLVCGKTGARKDGIVRHLENNHFPGNHPCSFCSKTFNSINSLQAHESRNHKK 313 The following BLAST results are available for this feature:
BLAST of broad-complex core protein isoform 6 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of broad-complex core protein isoform 6 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of broad-complex core protein isoform 6 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold186_size273091:161131..167378- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold186_size273091-processed-gene-1.16 ID=snap_masked-scaffold186_size273091-processed-gene-1.16|Name=broad-complex core protein isoform 6|organism=Tigriopus kingsejongensis|type=gene|length=6248bp|location=Sequence derived from alignment at scaffold186_size273091:161131..167378- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'broad-complex core protein isoform 6' has the following synonyms
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