histone h3, snap_masked-scaffold1959_size23944-processed-gene-0.1 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of histone h3 vs. L. salmonis genes
Match: EMLSAG00000005052 (supercontig:LSalAtl2s:LSalAtl2s263:50184:50594:1 gene:EMLSAG00000005052 transcript:EMLSAT00000005052 description:"augustus_masked-LSalAtl2s263-processed-gene-0.2") HSP 1 Score: 149.443 bits (376), Expect = 2.431e-46 Identity = 73/99 (73.74%), Postives = 82/99 (82.83%), Query Frame = 0 Query: 122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220 RYRPGTVALREIR+YQKS LLI +LPF RLV+EIAQ LRFQS+A+MALQEA+EAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+ Sbjct: 41 RYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTD-----LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
BLAST of histone h3 vs. L. salmonis genes
Match: EMLSAG00000005193 (supercontig:LSalAtl2s:LSalAtl2s2742:9871:10281:-1 gene:EMLSAG00000005193 transcript:EMLSAT00000005193 description:"augustus-LSalAtl2s2742-processed-gene-0.1") HSP 1 Score: 149.443 bits (376), Expect = 2.431e-46 Identity = 73/99 (73.74%), Postives = 82/99 (82.83%), Query Frame = 0 Query: 122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220 RYRPGTVALREIR+YQKS LLI +LPF RLV+EIAQ LRFQS+A+MALQEA+EAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+ Sbjct: 41 RYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTD-----LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
BLAST of histone h3 vs. L. salmonis genes
Match: EMLSAG00000007016 (supercontig:LSalAtl2s:LSalAtl2s399:369072:370235:1 gene:EMLSAG00000007016 transcript:EMLSAT00000007016 description:"augustus_masked-LSalAtl2s399-processed-gene-3.0") HSP 1 Score: 146.747 bits (369), Expect = 2.626e-45 Identity = 73/99 (73.74%), Postives = 81/99 (81.82%), Query Frame = 0 Query: 122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220 RYRPGTVALREIR+YQKS LLI +LPF RLV+EIAQ LRFQSAA+ ALQEA+EAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+ Sbjct: 41 RYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTD-----LRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
BLAST of histone h3 vs. L. salmonis genes
Match: EMLSAG00000000659 (supercontig:LSalAtl2s:LSalAtl2s1105:15895:22907:-1 gene:EMLSAG00000000659 transcript:EMLSAT00000000659 description:"maker-LSalAtl2s1105-augustus-gene-0.32") HSP 1 Score: 137.117 bits (344), Expect = 2.372e-37 Identity = 84/165 (50.91%), Postives = 106/165 (64.24%), Query Frame = 0 Query: 49 RDLDDLDDGASSSSSGFLTHTSSLIEAQRRSQKKPVAPKSLPPAQKSPRGSRARPLPPPPQVGGGYPATPKRRRYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNL 213 + + + +D AS++SS FL SS QR ++ + P + + S + P G P TPK+RR+RPGT ALREIR +QK +LLIP LPFSRLVKEI+ + AS S +RFQS+AL ALQEAAE Y+V L ED VL AIHAKRVTIMPKD+ L Sbjct: 34 KXVQNQNDTASNNSSEFLVARSS----QRSDNSSELS--FMYPTDLNKKKSISTPQGKNISKGIATP-TPKKRRFRPGTKALREIRHFQKKTDLLIPHLPFSRLVKEIS--IKAS-SKTDIRFQSSALQALQEAAETYLVHLFEDVVLLAIHAKRVTIMPKDIIL 188
BLAST of histone h3 vs. L. salmonis genes
Match: EMLSAG00000009977 (supercontig:LSalAtl2s:LSalAtl2s652:276147:278120:1 gene:EMLSAG00000009977 transcript:EMLSAT00000009977 description:"maker-LSalAtl2s652-snap-gene-2.38") HSP 1 Score: 122.865 bits (307), Expect = 1.423e-36 Identity = 62/88 (70.45%), Postives = 70/88 (79.55%), Query Frame = 0 Query: 133 IRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220 IR+YQKS LLI +LPF RLV+EIAQ LRFQSAA+ ALQEA+EAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+ Sbjct: 8 IRRYQKSTELLIRKLPFQRLVREIAQDFKTD-----LRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 90
BLAST of histone h3 vs. L. salmonis genes
Match: EMLSAG00000000378 (supercontig:LSalAtl2s:LSalAtl2s1058:129792:130401:-1 gene:EMLSAG00000000378 transcript:EMLSAT00000000378 description:"snap_masked-LSalAtl2s1058-processed-gene-0.5") HSP 1 Score: 100.908 bits (250), Expect = 5.515e-28 Identity = 50/70 (71.43%), Postives = 57/70 (81.43%), Query Frame = 0 Query: 151 RLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220 RLV+EIAQ LRFQS+A+MALQEA+EAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+ Sbjct: 25 RLVREIAQDFKTD-----LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 89
BLAST of histone h3 vs. L. salmonis genes
Match: EMLSAG00000001872 (supercontig:LSalAtl2s:LSalAtl2s1322:13257:13733:-1 gene:EMLSAG00000001872 transcript:EMLSAT00000001872 description:"augustus_masked-LSalAtl2s1322-processed-gene-0.3") HSP 1 Score: 92.4337 bits (228), Expect = 6.596e-24 Identity = 44/88 (50.00%), Postives = 59/88 (67.05%), Query Frame = 0 Query: 130 LREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRI 217 LR+I +Y++S LLI ++PF RLVKEI +A + + Q A+ ALQE E Y+ L E + LC IHA+RVT+MPKD+ LARRI Sbjct: 72 LRDIHRYRRSTELLIRKMPFYRLVKEIINQIACT----DFKVQVLAISALQEGCENYITDLFEKSNLCCIHARRVTLMPKDIRLARRI 155
BLAST of histone h3 vs. L. salmonis genes
Match: EMLSAG00000011182 (supercontig:LSalAtl2s:LSalAtl2s760:411575:414587:1 gene:EMLSAG00000011182 transcript:EMLSAT00000011182 description:"snap_masked-LSalAtl2s760-processed-gene-3.20") HSP 1 Score: 82.8037 bits (203), Expect = 1.017e-20 Identity = 37/44 (84.09%), Postives = 41/44 (93.18%), Query Frame = 0 Query: 177 MALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220 MALQEA+EAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+ Sbjct: 1 MALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 44
BLAST of histone h3 vs. L. salmonis genes
Match: EMLSAG00000011192 (supercontig:LSalAtl2s:LSalAtl2s760:431843:433024:1 gene:EMLSAG00000011192 transcript:EMLSAT00000011192 description:"snap-LSalAtl2s760-processed-gene-3.76") HSP 1 Score: 80.8777 bits (198), Expect = 1.901e-20 Identity = 37/44 (84.09%), Postives = 41/44 (93.18%), Query Frame = 0 Query: 177 MALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220 MALQEA+EAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+ Sbjct: 1 MALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 44
BLAST of histone h3 vs. L. salmonis genes
Match: EMLSAG00000005990 (supercontig:LSalAtl2s:LSalAtl2s323:266828:267898:1 gene:EMLSAG00000005990 transcript:EMLSAT00000005990 description:"snap-LSalAtl2s323-processed-gene-2.28") HSP 1 Score: 59.6918 bits (143), Expect = 3.208e-12 Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 0 Query: 169 LRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRI 217 L F +MALQE++ AY+V +D LCAI+ KRVTIM KD+ L+RRI Sbjct: 37 LEFPVLLVMALQESSAAYLVRFFQDNNLCAINYKRVTIMSKDIQLSRRI 85
BLAST of histone h3 vs. SwissProt
Match: gi|74967348|sp|Q27532.3|H33L2_CAEEL (RecName: Full=Histone H3.3-like type 2) HSP 1 Score: 146.747 bits (369), Expect = 8.107e-44 Identity = 78/127 (61.42%), Postives = 91/127 (71.65%), Query Frame = 0 Query: 94 KSPRGSRARPLPPPPQVGGGYPATPKRRRYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220 K+PR + A + G + K R+RPGTVALREIR+YQKS LL+ +LPF RLV+EIAQ LRFQSAA+ ALQEA+EAY+VGL EDT LCAIHAKRVTIMPKDM LARRIRG+ Sbjct: 15 KAPRKALATKAARKSAIVTG--SVKKVHRFRPGTVALREIRRYQKSTELLLRKLPFQRLVREIAQDFKTD-----LRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGE 134
BLAST of histone h3 vs. SwissProt
Match: gi|122089|sp|P06352.2|H3_STRPU (RecName: Full=Histone H3, embryonic) HSP 1 Score: 146.747 bits (369), Expect = 8.376e-44 Identity = 72/99 (72.73%), Postives = 81/99 (81.82%), Query Frame = 0 Query: 122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220 RYRPGTVALREIR+YQKS LLI +LPF RLV+EIAQ LRFQS+A+MALQEA+EAY+V L EDT LCAIHAKRVTIMPKD+ LARRIRG+ Sbjct: 41 RYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTE-----LRFQSSAVMALQEASEAYLVRLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
BLAST of histone h3 vs. SwissProt
Match: gi|116248097|sp|Q6NXT2.3|H3C_HUMAN (RecName: Full=Histone H3.3C; AltName: Full=Histone H3.5) HSP 1 Score: 146.747 bits (369), Expect = 8.859e-44 Identity = 73/99 (73.74%), Postives = 82/99 (82.83%), Query Frame = 0 Query: 122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220 RYRPGTVALREIR+YQKS LLI +LPF RLV+EIAQ LRFQSAA+ ALQEA+EAY+VGL+EDT LCAIHAKRVTIMPKD+ LARRIRG+ Sbjct: 40 RYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFNTD-----LRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLARRIRGE 133
BLAST of histone h3 vs. SwissProt
Match: gi|55977041|sp|P68427.2|H32_PEA (RecName: Full=Histone H3.2 >gi|55977043|sp|P68428.2|H32_WHEAT RecName: Full=Histone H3.2 >gi|55977044|sp|P68429.2|H32_MEDSA RecName: Full=Histone H3.2; AltName: Full=Histone H3.1; AltName: Full=Major histone H3 >gi|55977045|sp|P68430.2|H32_ONOVI RecName: Full=Histone H3.2) HSP 1 Score: 146.362 bits (368), Expect = 1.075e-43 Identity = 72/99 (72.73%), Postives = 81/99 (81.82%), Query Frame = 0 Query: 122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220 R+RPGTVALREIR+YQKS LLI +LPF RLV+EIAQ LRFQS+A+ ALQEAAEAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+ Sbjct: 41 RFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTD-----LRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
BLAST of histone h3 vs. SwissProt
Match: gi|122045178|sp|P08903.2|H32_ENCAL (RecName: Full=Histone H3.2) HSP 1 Score: 146.362 bits (368), Expect = 1.212e-43 Identity = 72/99 (72.73%), Postives = 81/99 (81.82%), Query Frame = 0 Query: 122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220 R+RPGTVALREIR+YQKS LLI +LPF RLV+EIAQ LRFQS+A+ ALQEAAEAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+ Sbjct: 41 RFRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTD-----LRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
BLAST of histone h3 vs. nr
Match: gi|749154691|ref|XP_011128974.1| (histone H3 [Gregarina niphandrodes] >gi|608691244|gb|EZG82921.1| histone H3 [Gregarina niphandrodes]) HSP 1 Score: 156.762 bits (395), Expect = 3.464e-45 Identity = 84/143 (58.74%), Postives = 102/143 (71.33%), Query Frame = 0 Query: 79 SQKKPVAPKSLPPAQKSPRGSRARPLPPPPQ-VGGGYPATPKRRRYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220 S+ VA KS A K+PR S++ + V G A+ K RR++PG VALREIR+YQKS LLI +LPF RLVKEIA + LRFQS+A++ALQEA+EAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+ Sbjct: 2 SKTNRVARKSTVSANKAPRSSKSLSTKAARKAVSGTVAASKKPRRFKPGVVALREIRKYQKSTELLIRKLPFQRLVKEIAAEYKSE-----LRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIGLARRIRGE 139
BLAST of histone h3 vs. nr
Match: gi|426273176|gb|AFY23219.1| (histone H3.1 [Hematodinium sp. SG-2012]) HSP 1 Score: 154.836 bits (390), Expect = 1.638e-44 Identity = 75/115 (65.22%), Postives = 88/115 (76.52%), Query Frame = 0 Query: 108 PQVGGGYPATPKRRRYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGDHR 222 P G + K+ R+RPGTVALREIR++QKS LLI RLPF RLV+E++Q LRFQ+ A++ALQEAAEAY+VGL EDT LCAIHAKRVTIMPKDM LARRIRG+HR Sbjct: 29 PHGGDNFFNQQKKHRFRPGTVALREIRKFQKSTELLIRRLPFQRLVREVSQEYRTD-----LRFQTQAVVALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGEHR 138
BLAST of histone h3 vs. nr
Match: gi|930235141|ref|XP_014162733.1| (PREDICTED: histone H3-like isoform X2 [Geospiza fortis]) HSP 1 Score: 152.91 bits (385), Expect = 7.590e-44 Identity = 78/113 (69.03%), Postives = 87/113 (76.99%), Query Frame = 0 Query: 108 PQVGGGYPATPKRRRYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220 P GGG P RYRPGTVALREIR+YQKS LLI +LPF RLV+EIAQ LRFQS+A+MALQEA+EAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+ Sbjct: 31 PATGGGKP-----HRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTD-----LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 133
BLAST of histone h3 vs. nr
Match: gi|470247771|ref|XP_004366768.1| (histone H3 domain-containing protein [Cavenderia fasciculata] >gi|328870762|gb|EGG19135.1| histone H3 domain-containing protein [Cavenderia fasciculata]) HSP 1 Score: 152.525 bits (384), Expect = 1.277e-43 Identity = 75/109 (68.81%), Postives = 87/109 (79.82%), Query Frame = 0 Query: 112 GGYPATPKRRRYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220 GG P K RYRPGTVALREIR+YQKS+ LLI +LPF RLV+EIAQ + LRFQSAA+ ALQEA+E+Y+VGL EDT LCAIHAKRVTIM KD++LARRIRG+ Sbjct: 31 GGAPGIKKTHRYRPGTVALREIRRYQKSSELLIKKLPFQRLVREIAQEFKSD-----LRFQSAAIQALQEASESYLVGLFEDTNLCAIHAKRVTIMTKDISLARRIRGE 134
BLAST of histone h3 vs. nr
Match: gi|1160571081|ref|XP_020435448.1| (histone H3 [Heterostelium album PN500] >gi|281209156|gb|EFA83331.1| histone H3 [Heterostelium album PN500]) HSP 1 Score: 152.525 bits (384), Expect = 1.351e-43 Identity = 80/127 (62.99%), Postives = 92/127 (72.44%), Query Frame = 0 Query: 94 KSPRGSRARPLPPPPQVGGGYPATPKRRRYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220 K PR ++ P V GG T RYRPGTVALREIR+YQKS+ LLI +LPF RLV+E+AQ LRFQS+A+ ALQEA+EAY+VGL EDT LCAIHAKRVTIMPKDM LARRIRG+ Sbjct: 15 KVPRKMISQKTAPMEPVSGGIKKT---HRYRPGTVALREIRKYQKSSELLIRKLPFQRLVREVAQEFKTD-----LRFQSSAIAALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGE 133
BLAST of histone h3 vs. nr
Match: gi|109148993|ref|XP_001083065.1| (PREDICTED: histone H3-like [Macaca mulatta] >gi|294887053|ref|XP_002771965.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|294887631|ref|XP_002772190.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|294888755|ref|XP_002772585.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|294895077|ref|XP_002775071.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|294904506|ref|XP_002777614.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|294950883|ref|XP_002786816.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|294952058|ref|XP_002787214.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|294955237|ref|XP_002788444.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|294956322|ref|XP_002788889.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|239875807|gb|EER03781.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|239876160|gb|EER04006.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|239876899|gb|EER04401.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|239880905|gb|EER06887.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|239885421|gb|EER09430.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|239901180|gb|EER18612.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|239901957|gb|EER19010.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|239903906|gb|EER20240.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|239904546|gb|EER20685.1| histone H3, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 152.525 bits (384), Expect = 1.439e-43 Identity = 74/99 (74.75%), Postives = 83/99 (83.84%), Query Frame = 0 Query: 122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220 RYRPGTVALREIR+YQKS +LLI +LPF RLV+E+AQ LRFQS+A+MALQEAAEAY+VGL EDT LCAIHAKRVTIMPKDM LARRIRG+ Sbjct: 41 RYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREVAQDFKTD-----LRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGE 134
BLAST of histone h3 vs. nr
Match: gi|946686027|ref|XP_014422717.1| (PREDICTED: histone H3.3 [Camelus ferus]) HSP 1 Score: 151.754 bits (382), Expect = 1.459e-43 Identity = 76/108 (70.37%), Postives = 84/108 (77.78%), Query Frame = 0 Query: 113 GYPATPKRRRYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220 GY K RYRPGTVALREIR+YQKS LLI +LPF RLV+EIAQ LRFQS+A+MALQEA EAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+ Sbjct: 10 GYTHVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTD-----LRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 112
BLAST of histone h3 vs. nr
Match: gi|1049214466|ref|XP_017539603.1| (PREDICTED: histone H3-like [Pygocentrus nattereri]) HSP 1 Score: 152.14 bits (383), Expect = 1.553e-43 Identity = 74/100 (74.00%), Postives = 83/100 (83.00%), Query Frame = 0 Query: 122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGDH 221 RYRPGTVALREIR+YQKS LLI +LPF RLV+EIAQ LRFQS+A+MALQEA+EAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+H Sbjct: 41 RYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTD-----LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGEH 135
BLAST of histone h3 vs. nr
Match: gi|1189080931|ref|XP_020808619.1| (histone H3.3-like [Drosophila serrata]) HSP 1 Score: 152.14 bits (383), Expect = 1.751e-43 Identity = 85/132 (64.39%), Postives = 95/132 (71.97%), Query Frame = 0 Query: 90 PPAQKSPRGSRARPLPPPPQVGGGYPATPKRRRYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGDH 221 P A K R +R P VGG K RYRPGTVALREIR+YQKS LLI RLPF RLV+EIAQG A LRFQ+AAL ALQEA+EA++VGL EDT LCAIHA+RVTIMPKD+ LARRIRGD+ Sbjct: 20 PMATKVARKTR-------PAVGG----VKKPHRYRPGTVALREIRRYQKSTELLIRRLPFQRLVREIAQGFKAD-----LRFQTAALGALQEASEAFLVGLFEDTNLCAIHAQRVTIMPKDIQLARRIRGDN 135
BLAST of histone h3 vs. nr
Match: gi|499052444|ref|XP_004576699.1| (histone H3-like [Maylandia zebra]) HSP 1 Score: 152.14 bits (383), Expect = 2.410e-43 Identity = 74/105 (70.48%), Postives = 84/105 (80.00%), Query Frame = 0 Query: 122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGDHRHDFH 226 RYRPGTVALREIR+YQKS LLI +LPF RLV+EIAQ LRFQS+A+MALQEA+EAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+ + F Sbjct: 41 RYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTD-----LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERAYSFF 140 The following BLAST results are available for this feature:
BLAST of histone h3 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 11
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BLAST of histone h3 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of histone h3 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1959_size23944:10350..11728+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold1959_size23944-processed-gene-0.1 ID=snap_masked-scaffold1959_size23944-processed-gene-0.1|Name=histone h3|organism=Tigriopus kingsejongensis|type=gene|length=1379bp|location=Sequence derived from alignment at scaffold1959_size23944:10350..11728+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'histone h3' has the following synonyms
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