histone h3, snap_masked-scaffold1959_size23944-processed-gene-0.1 (gene) Tigriopus kingsejongensis

Overview
Namehistone h3
Unique Namesnap_masked-scaffold1959_size23944-processed-gene-0.1
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of histone h3 vs. L. salmonis genes
Match: EMLSAG00000011500 (supercontig:LSalAtl2s:LSalAtl2s796:151018:151580:1 gene:EMLSAG00000011500 transcript:EMLSAT00000011500 description:"snap-LSalAtl2s796-processed-gene-1.15")

HSP 1 Score: 48.521 bits (114), Expect = 5.985e-8
Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 0 
Query:  177 MALQEAAEAYVVGLMEDTVLCAIHAKR 203
            MALQE +E ++VGL EDT LCAIHAKR
Sbjct:    1 MALQETSEVFLVGLFEDTDLCAIHAKR 27
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BLAST of histone h3 vs. SwissProt
Match: gi|119370646|sp|Q402E2.3|H33A_LILLO (RecName: Full=Histone H3.3a; AltName: Full=Histone soH3-2; AltName: Full=Somatic-like histone H3-2)

HSP 1 Score: 149.828 bits (377), Expect = 4.504e-45
Identity = 74/99 (74.75%), Postives = 83/99 (83.84%), Query Frame = 0 
Query:  122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220
            RYRPGTVALREIR+YQKS +LLI +LPF RLV+EIAQ   A      LRFQS A++ALQEAAEAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+
Sbjct:   41 RYRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQDYKAD-----LRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
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BLAST of histone h3 vs. SwissProt
Match: gi|59799542|sp|P69071.2|H3_DERIM (RecName: Full=Histone H3, embryonic >gi|59799543|sp|P69072.2|H3_LYTPI RecName: Full=Histone H3, embryonic >gi|59799544|sp|P69073.2|H3_PARLI RecName: Full=Histone H3, embryonic >gi|59799545|sp|P69074.2|H3_PISBR RecName: Full=Histone H3, embryonic >gi|59799546|sp|P69075.2|H3_PISOC RecName: Full=Histone H3, embryonic >gi|59799547|sp|P69076.2|H3_PSAMI RecName: Full=Histone H3, embryonic >gi|59799548|sp|P69077.2|H3_PYCHE RecName: Full=Histone H3, embryonic >gi|59799549|sp|P69078.2|H3_SOLST RecName: Full=Histone H3, embryonic >gi|59799550|sp|P69079.2|H3_STRDR RecName: Full=Histone H3, embryonic)

HSP 1 Score: 149.443 bits (376), Expect = 5.975e-45
Identity = 73/99 (73.74%), Postives = 82/99 (82.83%), Query Frame = 0 
Query:  122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220
            RYRPGTVALREIR+YQKS  LLI +LPF RLV+EIAQ          LRFQS+A+MALQEA+EAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+
Sbjct:   41 RYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTE-----LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
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BLAST of histone h3 vs. SwissProt
Match: gi|46397771|sp|P02299.4|H3_DROME (RecName: Full=Histone H3 >gi|55977046|sp|P84230.2|H32_CAIMO RecName: Full=Histone H3.2 >gi|55977049|sp|P84234.2|H32_ONCMY RecName: Full=Histone H3.2 >gi|55977050|sp|P84235.2|H3_PLADU RecName: Full=Histone H3 >gi|55977051|sp|P84236.2|H3_DROHY RecName: Full=Histone H3 >gi|55977052|sp|P84237.2|H3_TIGCA RecName: Full=Histone H3 >gi|55977053|sp|P84238.2|H3_CHITH RecName: Full=Histone H3; Short=H3 >gi|55977054|sp|P84239.2|H3_URECA RecName: Full=Histone H3 >gi|55977059|sp|P84228.2|H32_MOUSE RecName: Full=Histone H3.2 >gi|55977060|sp|P84229.2|H32_CHICK RecName: Full=Histone H3.2; AltName: Full=Histone H3 class I >gi|55977061|sp|P84233.2|H32_XENLA RecName: Full=Histone H3.2 >gi|74758899|sp|Q71DI3.3|H32_HUMAN RecName: Full=Histone H3.2; AltName: Full=Histone H3/m; AltName: Full=Histone H3/o >gi|81911078|sp|Q6LBE8.3|H32_MUSPA RecName: Full=Histone H3.2 >gi|82249441|sp|Q4QRF4.3|H32_DANRE RecName: Full=Histone H3.2 >gi|116248095|sp|Q28D37.3|H32_XENTR RecName: Full=Histone H3.2 >gi|116256314|sp|P84227.2|H32_BOVIN RecName: Full=Histone H3.2 >gi|116256315|sp|P84231.2|H32_ICTBU RecName: Full=Histone H3.2 >gi|116256316|sp|P84232.2|H32_PORAF RecName: Full=Histone H3.2)

HSP 1 Score: 149.443 bits (376), Expect = 7.345e-45
Identity = 73/99 (73.74%), Postives = 82/99 (82.83%), Query Frame = 0 
Query:  122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220
            RYRPGTVALREIR+YQKS  LLI +LPF RLV+EIAQ          LRFQS+A+MALQEA+EAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+
Sbjct:   41 RYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTD-----LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
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BLAST of histone h3 vs. SwissProt
Match: gi|55977055|sp|P68431.2|H31_HUMAN (RecName: Full=Histone H3.1; AltName: Full=Histone H3/a; AltName: Full=Histone H3/b; AltName: Full=Histone H3/c; AltName: Full=Histone H3/d; AltName: Full=Histone H3/f; AltName: Full=Histone H3/h; AltName: Full=Histone H3/i; AltName: Full=Histone H3/j; AltName: Full=Histone H3/k; AltName: Full=Histone H3/l >gi|55977056|sp|P68432.2|H31_BOVIN RecName: Full=Histone H3.1 >gi|55977057|sp|P68433.2|H31_MOUSE RecName: Full=Histone H3.1 >gi|81863898|sp|Q6LED0.3|H31_RAT RecName: Full=Histone H3.1 >gi|81911079|sp|Q6LBF0.3|H31_MUSPA RecName: Full=Histone H3.1)

HSP 1 Score: 149.058 bits (375), Expect = 9.431e-45
Identity = 73/99 (73.74%), Postives = 81/99 (81.82%), Query Frame = 0 
Query:  122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220
            RYRPGTVALREIR+YQKS  LLI +LPF RLV+EIAQ          LRFQS+A+MALQEA EAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+
Sbjct:   41 RYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTD-----LRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
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BLAST of histone h3 vs. SwissProt
Match: gi|122090|sp|P08437.2|H3_VOLCA (RecName: Full=Histone H3 >gi|75275872|sp|Q6LCW8.1|H32_CHLRE RecName: Full=Histone H3 type 2)

HSP 1 Score: 148.673 bits (374), Expect = 1.309e-44
Identity = 73/99 (73.74%), Postives = 81/99 (81.82%), Query Frame = 0 
Query:  122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220
            RYRPGTVALREIR+YQKS  LLI +LPF RLV+EIAQ          LRFQS A++ALQEAAEAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+
Sbjct:   40 RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTD-----LRFQSQAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 133
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BLAST of histone h3 vs. SwissProt
Match: gi|75025386|sp|Q9U281.3|H332_CAEEL (RecName: Full=Histone H3.3 type 2)

HSP 1 Score: 148.673 bits (374), Expect = 1.321e-44
Identity = 74/99 (74.75%), Postives = 81/99 (81.82%), Query Frame = 0 
Query:  122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220
            RYRPGTVALREIR+YQKS  LLI +LPF RLV+EIAQ          LRFQSAA+ ALQEA+EAY+VGL EDT LCAIHAKRVTIMPKDM LARRIRG+
Sbjct:   41 RYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTD-----LRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGE 134
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BLAST of histone h3 vs. SwissProt
Match: gi|20138105|sp|P90543.3|H3_EUPCR (RecName: Full=Histone H3)

HSP 1 Score: 148.288 bits (373), Expect = 1.733e-44
Identity = 73/99 (73.74%), Postives = 81/99 (81.82%), Query Frame = 0 
Query:  122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220
            RYRPGTVALREIR+YQKS  LLI +LPF RLV+EIAQ          LRFQS+A++ALQEAAEAY+V L EDT LCAIHAKRVTIMPKDM LARRIRG+
Sbjct:   41 RYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQEFKGD-----LRFQSSAVLALQEAAEAYLVSLFEDTNLCAIHAKRVTIMPKDMQLARRIRGE 134
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BLAST of histone h3 vs. SwissProt
Match: gi|27734400|sp|P59169.2|H33_ARATH (RecName: Full=Histone H3.3; AltName: Full=Histone H3.2 >gi|54035960|sp|Q71V89.3|H33_GOSHI RecName: Full=Histone H3.3 >gi|59799551|sp|P69245.2|H33_LOLTE RecName: Full=Histone H3.3 >gi|59799580|sp|P69244.2|H33_MEDSA RecName: Full=Histone H3.3; AltName: Full=Histone H3.2; AltName: Full=Minor histone H3 >gi|73919839|sp|Q71H73.3|H33_VITVI RecName: Full=Histone H3.3 >gi|73919913|sp|Q6RUR1.3|H33_CAPAN RecName: Full=Histone H3.3 >gi|73919918|sp|Q71U98.3|H33_ORYCO RecName: Full=Histone H3.3 >gi|73919919|sp|Q711T2.3|H33_PINPS RecName: Full=Histone H3.3 >gi|75138729|sp|Q76N23.1|H33_TOBAC RecName: Full=Histone H3.3 >gi|119370648|sp|Q3C2E5.3|H33_LOLMU RecName: Full=Histone H3.3; AltName: Full=Replacement histone H3 >gi|158512877|sp|A2XHJ3.1|H33_ORYSI RecName: Full=Histone H3.3; AltName: Full=H3.2 >gi|158564092|sp|Q0JCT1.2|H33_ORYSJ RecName: Full=Histone H3.3; AltName: Full=H3.2)

HSP 1 Score: 148.288 bits (373), Expect = 2.062e-44
Identity = 73/99 (73.74%), Postives = 81/99 (81.82%), Query Frame = 0 
Query:  122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220
            RYRPGTVALREIR+YQKS  LLI +LPF RLV+EIAQ          LRFQS A++ALQEAAEAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+
Sbjct:   41 RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTD-----LRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
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BLAST of histone h3 vs. SwissProt
Match: gi|48427895|sp|Q8WSF1.3|H33_TRIPS (RecName: Full=Histone H3.3)

HSP 1 Score: 147.902 bits (372), Expect = 2.324e-44
Identity = 74/99 (74.75%), Postives = 81/99 (81.82%), Query Frame = 0 
Query:  122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220
            RYRPGTVALREIR+YQKS  LLI +LPF RLV+EIAQ          LRFQSAA+ ALQEAAEAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+
Sbjct:   41 RYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTD-----LRFQSAAIGALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
[Close]
BLAST of histone h3 vs. SwissProt
Match: gi|81863473|sp|Q64400.3|H32_CRILO (RecName: Full=Histone H3.2)

HSP 1 Score: 147.902 bits (372), Expect = 2.508e-44
Identity = 72/99 (72.73%), Postives = 81/99 (81.82%), Query Frame = 0 
Query:  122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220
            RYRPGTV LREIR+YQKS  LLI +LPF RLV+EIAQ          LRFQS+A+MALQEA+EAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+
Sbjct:   41 RYRPGTVTLREIRRYQKSTELLIRKLPFQRLVREIAQDFKTD-----LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
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BLAST of histone h3 vs. nr
Match: gi|749154691|ref|XP_011128974.1| (histone H3 [Gregarina niphandrodes] >gi|608691244|gb|EZG82921.1| histone H3 [Gregarina niphandrodes])

HSP 1 Score: 156.762 bits (395), Expect = 3.464e-45
Identity = 84/143 (58.74%), Postives = 102/143 (71.33%), Query Frame = 0 
Query:   79 SQKKPVAPKSLPPAQKSPRGSRARPLPPPPQ-VGGGYPATPKRRRYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220
            S+   VA KS   A K+PR S++       + V G   A+ K RR++PG VALREIR+YQKS  LLI +LPF RLVKEIA    +      LRFQS+A++ALQEA+EAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+
Sbjct:    2 SKTNRVARKSTVSANKAPRSSKSLSTKAARKAVSGTVAASKKPRRFKPGVVALREIRKYQKSTELLIRKLPFQRLVKEIAAEYKSE-----LRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIGLARRIRGE 139
[Close]
BLAST of histone h3 vs. nr
Match: gi|426273176|gb|AFY23219.1| (histone H3.1 [Hematodinium sp. SG-2012])

HSP 1 Score: 154.836 bits (390), Expect = 1.638e-44
Identity = 75/115 (65.22%), Postives = 88/115 (76.52%), Query Frame = 0 
Query:  108 PQVGGGYPATPKRRRYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGDHR 222
            P  G  +    K+ R+RPGTVALREIR++QKS  LLI RLPF RLV+E++Q          LRFQ+ A++ALQEAAEAY+VGL EDT LCAIHAKRVTIMPKDM LARRIRG+HR
Sbjct:   29 PHGGDNFFNQQKKHRFRPGTVALREIRKFQKSTELLIRRLPFQRLVREVSQEYRTD-----LRFQTQAVVALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGEHR 138
[Close]
BLAST of histone h3 vs. nr
Match: gi|930235141|ref|XP_014162733.1| (PREDICTED: histone H3-like isoform X2 [Geospiza fortis])

HSP 1 Score: 152.91 bits (385), Expect = 7.590e-44
Identity = 78/113 (69.03%), Postives = 87/113 (76.99%), Query Frame = 0 
Query:  108 PQVGGGYPATPKRRRYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220
            P  GGG P      RYRPGTVALREIR+YQKS  LLI +LPF RLV+EIAQ          LRFQS+A+MALQEA+EAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+
Sbjct:   31 PATGGGKP-----HRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTD-----LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 133
[Close]
BLAST of histone h3 vs. nr
Match: gi|470247771|ref|XP_004366768.1| (histone H3 domain-containing protein [Cavenderia fasciculata] >gi|328870762|gb|EGG19135.1| histone H3 domain-containing protein [Cavenderia fasciculata])

HSP 1 Score: 152.525 bits (384), Expect = 1.277e-43
Identity = 75/109 (68.81%), Postives = 87/109 (79.82%), Query Frame = 0 
Query:  112 GGYPATPKRRRYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220
            GG P   K  RYRPGTVALREIR+YQKS+ LLI +LPF RLV+EIAQ   +      LRFQSAA+ ALQEA+E+Y+VGL EDT LCAIHAKRVTIM KD++LARRIRG+
Sbjct:   31 GGAPGIKKTHRYRPGTVALREIRRYQKSSELLIKKLPFQRLVREIAQEFKSD-----LRFQSAAIQALQEASESYLVGLFEDTNLCAIHAKRVTIMTKDISLARRIRGE 134
[Close]
BLAST of histone h3 vs. nr
Match: gi|1160571081|ref|XP_020435448.1| (histone H3 [Heterostelium album PN500] >gi|281209156|gb|EFA83331.1| histone H3 [Heterostelium album PN500])

HSP 1 Score: 152.525 bits (384), Expect = 1.351e-43
Identity = 80/127 (62.99%), Postives = 92/127 (72.44%), Query Frame = 0 
Query:   94 KSPRGSRARPLPPPPQVGGGYPATPKRRRYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220
            K PR   ++   P   V GG   T    RYRPGTVALREIR+YQKS+ LLI +LPF RLV+E+AQ          LRFQS+A+ ALQEA+EAY+VGL EDT LCAIHAKRVTIMPKDM LARRIRG+
Sbjct:   15 KVPRKMISQKTAPMEPVSGGIKKT---HRYRPGTVALREIRKYQKSSELLIRKLPFQRLVREVAQEFKTD-----LRFQSSAIAALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGE 133
[Close]
BLAST of histone h3 vs. nr
Match: gi|109148993|ref|XP_001083065.1| (PREDICTED: histone H3-like [Macaca mulatta] >gi|294887053|ref|XP_002771965.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|294887631|ref|XP_002772190.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|294888755|ref|XP_002772585.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|294895077|ref|XP_002775071.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|294904506|ref|XP_002777614.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|294950883|ref|XP_002786816.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|294952058|ref|XP_002787214.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|294955237|ref|XP_002788444.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|294956322|ref|XP_002788889.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|239875807|gb|EER03781.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|239876160|gb|EER04006.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|239876899|gb|EER04401.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|239880905|gb|EER06887.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|239885421|gb|EER09430.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|239901180|gb|EER18612.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|239901957|gb|EER19010.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|239903906|gb|EER20240.1| histone H3, putative [Perkinsus marinus ATCC 50983] >gi|239904546|gb|EER20685.1| histone H3, putative [Perkinsus marinus ATCC 50983])

HSP 1 Score: 152.525 bits (384), Expect = 1.439e-43
Identity = 74/99 (74.75%), Postives = 83/99 (83.84%), Query Frame = 0 
Query:  122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220
            RYRPGTVALREIR+YQKS +LLI +LPF RLV+E+AQ          LRFQS+A+MALQEAAEAY+VGL EDT LCAIHAKRVTIMPKDM LARRIRG+
Sbjct:   41 RYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREVAQDFKTD-----LRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGE 134
[Close]
BLAST of histone h3 vs. nr
Match: gi|946686027|ref|XP_014422717.1| (PREDICTED: histone H3.3 [Camelus ferus])

HSP 1 Score: 151.754 bits (382), Expect = 1.459e-43
Identity = 76/108 (70.37%), Postives = 84/108 (77.78%), Query Frame = 0 
Query:  113 GYPATPKRRRYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGD 220
            GY    K  RYRPGTVALREIR+YQKS  LLI +LPF RLV+EIAQ          LRFQS+A+MALQEA EAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+
Sbjct:   10 GYTHVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTD-----LRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 112
[Close]
BLAST of histone h3 vs. nr
Match: gi|1049214466|ref|XP_017539603.1| (PREDICTED: histone H3-like [Pygocentrus nattereri])

HSP 1 Score: 152.14 bits (383), Expect = 1.553e-43
Identity = 74/100 (74.00%), Postives = 83/100 (83.00%), Query Frame = 0 
Query:  122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGDH 221
            RYRPGTVALREIR+YQKS  LLI +LPF RLV+EIAQ          LRFQS+A+MALQEA+EAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+H
Sbjct:   41 RYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTD-----LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGEH 135
[Close]
BLAST of histone h3 vs. nr
Match: gi|1189080931|ref|XP_020808619.1| (histone H3.3-like [Drosophila serrata])

HSP 1 Score: 152.14 bits (383), Expect = 1.751e-43
Identity = 85/132 (64.39%), Postives = 95/132 (71.97%), Query Frame = 0 
Query:   90 PPAQKSPRGSRARPLPPPPQVGGGYPATPKRRRYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGDH 221
            P A K  R +R       P VGG      K  RYRPGTVALREIR+YQKS  LLI RLPF RLV+EIAQG  A      LRFQ+AAL ALQEA+EA++VGL EDT LCAIHA+RVTIMPKD+ LARRIRGD+
Sbjct:   20 PMATKVARKTR-------PAVGG----VKKPHRYRPGTVALREIRRYQKSTELLIRRLPFQRLVREIAQGFKAD-----LRFQTAALGALQEASEAFLVGLFEDTNLCAIHAQRVTIMPKDIQLARRIRGDN 135
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BLAST of histone h3 vs. nr
Match: gi|499052444|ref|XP_004576699.1| (histone H3-like [Maylandia zebra])

HSP 1 Score: 152.14 bits (383), Expect = 2.410e-43
Identity = 74/105 (70.48%), Postives = 84/105 (80.00%), Query Frame = 0 
Query:  122 RYRPGTVALREIRQYQKSANLLIPRLPFSRLVKEIAQGVAASMSVRGLRFQSAALMALQEAAEAYVVGLMEDTVLCAIHAKRVTIMPKDMNLARRIRGDHRHDFH 226
            RYRPGTVALREIR+YQKS  LLI +LPF RLV+EIAQ          LRFQS+A+MALQEA+EAY+VGL EDT LCAIHAKRVTIMPKD+ LARRIRG+  + F 
Sbjct:   41 RYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTD-----LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERAYSFF 140
The following BLAST results are available for this feature:
BLAST of histone h3 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 11
Match NameE-valueIdentityDescription
EMLSAG000000115005.985e-874.07supercontig:LSalAtl2s:LSalAtl2s796:151018:151580:1... [more]

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BLAST of histone h3 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|119370646|sp|Q402E2.3|H33A_LILLO4.504e-4574.75RecName: Full=Histone H3.3a; AltName: Full=Histone... [more]
gi|59799542|sp|P69071.2|H3_DERIM5.975e-4573.74RecName: Full=Histone H3, embryonic >gi|59799543|s... [more]
gi|46397771|sp|P02299.4|H3_DROME7.345e-4573.74RecName: Full=Histone H3 >gi|55977046|sp|P84230.2|... [more]
gi|55977055|sp|P68431.2|H31_HUMAN9.431e-4573.74RecName: Full=Histone H3.1; AltName: Full=Histone ... [more]
gi|122090|sp|P08437.2|H3_VOLCA1.309e-4473.74RecName: Full=Histone H3 >gi|75275872|sp|Q6LCW8.1|... [more]
gi|75025386|sp|Q9U281.3|H332_CAEEL1.321e-4474.75RecName: Full=Histone H3.3 type 2[more]
gi|20138105|sp|P90543.3|H3_EUPCR1.733e-4473.74RecName: Full=Histone H3[more]
gi|27734400|sp|P59169.2|H33_ARATH2.062e-4473.74RecName: Full=Histone H3.3; AltName: Full=Histone ... [more]
gi|48427895|sp|Q8WSF1.3|H33_TRIPS2.324e-4474.75RecName: Full=Histone H3.3[more]
gi|81863473|sp|Q64400.3|H32_CRILO2.508e-4472.73RecName: Full=Histone H3.2[more]

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BLAST of histone h3 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|749154691|ref|XP_011128974.1|3.464e-4558.74histone H3 [Gregarina niphandrodes] >gi|608691244|... [more]
gi|426273176|gb|AFY23219.1|1.638e-4465.22histone H3.1 [Hematodinium sp. SG-2012][more]
gi|930235141|ref|XP_014162733.1|7.590e-4469.03PREDICTED: histone H3-like isoform X2 [Geospiza fo... [more]
gi|470247771|ref|XP_004366768.1|1.277e-4368.81histone H3 domain-containing protein [Cavenderia f... [more]
gi|1160571081|ref|XP_020435448.1|1.351e-4362.99histone H3 [Heterostelium album PN500] >gi|2812091... [more]
gi|109148993|ref|XP_001083065.1|1.439e-4374.75PREDICTED: histone H3-like [Macaca mulatta] >gi|29... [more]
gi|946686027|ref|XP_014422717.1|1.459e-4370.37PREDICTED: histone H3.3 [Camelus ferus][more]
gi|1049214466|ref|XP_017539603.1|1.553e-4374.00PREDICTED: histone H3-like [Pygocentrus nattereri][more]
gi|1189080931|ref|XP_020808619.1|1.751e-4364.39histone H3.3-like [Drosophila serrata][more]
gi|499052444|ref|XP_004576699.1|2.410e-4370.48histone H3-like [Maylandia zebra][more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1959_size23944supercontigscaffold1959_size23944:10350..11728 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1959_size23944-processed-gene-0.1-mRNA-1snap_masked-scaffold1959_size23944-processed-gene-0.1-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1959_size23944:10350..11728+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1959_size23944-processed-gene-0.1 ID=snap_masked-scaffold1959_size23944-processed-gene-0.1|Name=histone h3|organism=Tigriopus kingsejongensis|type=gene|length=1379bp|location=Sequence derived from alignment at scaffold1959_size23944:10350..11728+ (Tigriopus kingsejongensis)
ATGGTGCGCACACATCAGAATTCGCCCAAGAAGGGCGGAGCGGGCGCCGC
TCGGCCGGCTTGGGCCGGGGGCCGCAGCAAGGCGGGCGGCGGCGAAGCGG
GCAGCTCGTCCACGGGCCAGGACACGGGCATCGGCCTCATGACGCGGGAC
CTGGACGATCTGGACGACGGGGCCTCGTCCTCCTCCTCGGGCTTCCTCAC
ACACACCTCCAGCCTCATCGAGGCCCAGCGGCGGAGCCAGAAGAAGCCCG
TGGCGCCCGTGGCGCCCGCAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGCAGCCGCCACGGGCA
GCCGTCCGGCCTTGACCCGCCCCACCCTGCCCGACCACCCGGCCTTCCAC
GCCAAGAAGAGTCTGCCGCCGGCCCAGAAGTCGCCCCGGGGCAGCCGGGC
CCGCCCCCTCCCGCCCCCGCCCCAGGTGGGCGGCGGCTACCCGGCCACGC
CCAAGCGGCGACGCTACCGCCCGGGCACGGTGGCTCTGCGGGAGATTCGG
CAGTACCAGAAGAGCGCCAACCTGCTCATTCCCCGCCTGCCGTTCTCGCG
CCTGGTCAAGGAGATCGCCCAGGGCGTGGCGGCCTCCATGAGTGTGCGCG
GCCTCCGCTTCCAGTCGGCCGCGCTGATGGCGCTGCAGGAGGCGGCCGAG
GCCTACGTGGTGGGCCTCATGGAGGACACGGTCCTCTGCGCCATCCACGC
CAAGCGGGTGACCATCATGCCCAAGGACATGAACCTGGCCCGCCGCATTC
GGGGCGACCACCGCCACGACTTCCACTGA
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Synonyms
The feature 'histone h3' has the following synonyms
Synonym
Tk11219
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