carnitine dehydratase, snap_masked-scaffold1_size3401120-processed-gene-1.35 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of carnitine dehydratase vs. L. salmonis genes
Match: EMLSAG00000001226 (supercontig:LSalAtl2s:LSalAtl2s11:421277:423175:1 gene:EMLSAG00000001226 transcript:EMLSAT00000001226 description:"maker-LSalAtl2s11-augustus-gene-4.11") HSP 1 Score: 189.119 bits (479), Expect = 3.023e-57 Identity = 98/215 (45.58%), Postives = 142/215 (66.05%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDY-DVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQD-GPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYE--AKSSGKGQVVDAAISDCTAHLSTMLH-GLMFNNRWQDQRGSNLLDGGAHHYNSYRCADDNLHL 210 GA V+R++ + Y DV RGK+S++++LKS +G +L++ +DV +E FRPGVME+L+L P+ + NP+L+YAR++G+GQ+ PL AGHDINYI+LSGALS G + KPV P+N++GDFGGG L AFGI+AA+YE SSGKGQ++D I+ ++LST L+ + W + RG N+LD GAH Y Y + ++ Sbjct: 27 FGASVIRVDNHPD----AVVYPDVSCRGKKSISLNLKSSKGRSIVKKLVNNSDVFLESFRPGVMEKLQLCPDVLTKENPSLIYARLSGYGQEHNPLTYRAGHDINYISLSGALSKIGRVNEKPVPPINIVGDFGGGGLTCAFGIIAALYERSVNSSGKGQIIDCGITQGASYLSTWLYQSKNIPHLWGNPRGENVLDTGAHFYEVYETKEPGKYI 237
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|341940628|sp|O09174.4|AMACR_MOUSE (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-methylacyl-CoA racemase) HSP 1 Score: 195.667 bits (496), Expect = 2.814e-58 Identity = 100/207 (48.31%), Postives = 133/207 (64.25%), Query Frame = 0 Query: 1 MGADVVRLER--RQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 GA+VVR+ R G+N L RGKRS+A+DLK QG + +RADVL+E FR GVME+L+LGPE + NP L+YAR++G+GQ G + AGHDINY+ALSG LS G P P+NLL DFGGG L GI+ A++E SG+GQV+D+++ + TA+LS+ L W+ RG N+LDGGA Y +Y+ AD Sbjct: 27 FGAEVVRVNRLGSTGENFLA-------RGKRSLALDLKRSQGVTVLRRMCARADVLLEPFRCGVMEKLQLGPETLLQDNPKLIYARLSGFGQSGIFSKVAGHDINYLALSGVLSKIGRSGENPYPPLNLLADFGGGGLMCTLGIVLALFERTRSGRGQVIDSSMVEGTAYLSSFLWKTQPMGLWKQPRGQNILDGGAPFYTTYKTAD 226
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|313104070|sp|Q9UHK6.2|AMACR_HUMAN (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-methylacyl-CoA racemase) HSP 1 Score: 190.274 bits (482), Expect = 3.466e-56 Identity = 101/207 (48.79%), Postives = 130/207 (62.80%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDYDV--LNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 GA VVR++R G YDV L RGKRS+ +DLK +G L R+DVL+E FR GVME+L+LGPE NP L+YAR++G+GQ G AGHDINY+ALSG LS G P P+NLL DF GG L A GI+ A+++ +GKGQV+DA + + TA+LS+ L + W+ RG N+LDGGA Y +YR AD Sbjct: 27 FGARVVRVDRP------GSRYDVSRLGRGKRSLVLDLKQPRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFCRLAGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTGKGQVIDANMVEGTAYLSSFLWKTQKLSLWEAPRGQNMLDGGAPFYTTYRTAD 227
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|13637497|sp|P70473.3|AMACR_RAT (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-arylpropionyl-CoA epimerase; AltName: Full=2-methylacyl-CoA racemase) HSP 1 Score: 186.808 bits (473), Expect = 5.888e-55 Identity = 100/205 (48.78%), Postives = 127/205 (61.95%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 GA+VV ++R N L RGKRS+A+DLK G + +RADVL+E FR GVME+L+LGPE + NP L+YAR++G+GQ G + AGHDINY+ALSG LS G P P+NLL DFGGG L GI+ A++E SG GQV+DA + + TA+LST L W RG NLLDGGA Y +Y+ AD Sbjct: 27 FGAEVVLVDRLGSVN----HPSHLARGKRSLALDLKRSPGAAVLRRMCARADVLLEPFRCGVMEKLQLGPETLRQDNPKLIYARLSGFGQSGIFSKVAGHDINYVALSGVLSKIGRSGENPYPPLNLLADFGGGGLMCTLGILLALFERTRSGLGQVIDANMVEGTAYLSTFLWKTQAMGLWAQPRGQNLLDGGAPFYTTYKTAD 227
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|74620364|sp|Q8J0F0.1|CEFD2_ACRCH (RecName: Full=Isopenicillin N epimerase component 2; Short=IPN epimerase component 2; AltName: Full=Isopenicillin N epimerase acyl-CoA racemase component) HSP 1 Score: 156.377 bits (394), Expect = 2.894e-43 Identity = 91/205 (44.39%), Postives = 118/205 (57.56%), Query Frame = 0 Query: 2 GADVVRLERRQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGP-EDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 GA V+R+ D DVL R K S+ +DLK + L +LSRADVLI+ FRPGV+ERL L P E +AN LV AR+TG+ +DG AGHDINY+A+SG L+ G P P N+LGDF GG GI+ A+ ++G GQVV+A + D +A+L+TM W RG N+LDGG Y +YR D Sbjct: 34 GASVLRI-----DGPRSPKGDVLARNKSSICIDLKHPPSRKVLLSILSRADVLIDPFRPGVLERLGLSPTEVLLKANARLVVARLTGFRRDGKYQDMAGHDINYLAVSGVLAMLGRAGENPFPPANILGDFAGGGAMCVVGILLALVSRDATGLGQVVEANMVDGSAYLATMPRLATKTPFWGSPRGENVLDGGCPWYATYRTKD 233
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|29840845|sp|Q09618.3|YS74_CAEEL (RecName: Full=CaiB/baiF CoA-transferase family protein ZK892.4) HSP 1 Score: 130.954 bits (328), Expect = 4.291e-34 Identity = 74/211 (35.07%), Postives = 119/211 (56.40%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAF-GDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVY-EAKSSGKGQVVDAAISDCTAHLSTML-HGLMFNNRWQDQRGSNLLDGGAHHYNSYRCADDNL 208 GADV ++++ I+ LNRGK +DLK+ + + +L +DVL++ +RPG +E++ L P W N L+ +++G+GQ G ++ GHDINY+ALSG L F G +P P N+L DF GG L AFGI++A+Y + + GKG ++D ++++ A+LS+ + H N + D+ L G Y +Y+ DD Sbjct: 29 FGADVTVIDKKNP----AIE-QRLNRGKTMKQLDLKNPEDIKKVRDLCQTSDVLLDPYRPGTLEKMGLDPSTLWNNNKGLIICKISGYGQTGRMSQETGHDINYVALSGMLPTFSGVNATRPWPPANMLADFAGGGLSAAFGILSAIYARSHNGGKGCLLDCSMTEGVAYLSSFVQHYYDQPNLFTDKYA--LFSGECPIYRTYKTKDDKF 232
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|81542073|sp|Q9I701.1|BAUB_PSEAE (RecName: Full=Beta-alanine degradation protein BauB) HSP 1 Score: 120.553 bits (301), Expect = 6.073e-33 Identity = 58/92 (63.04%), Postives = 67/92 (72.83%), Query Frame = 0 Query: 247 RPQAVPTVQLDNDKVLVTEWRFPPGGETGWHRHGMDYVVVPQTTGQLLIELSDGEMRADLTTGVAYARVEGTEHNVVNDNDFEFVFVEVELK 338 RPQAVPTVQ+DN +V+VTEWRF PG ETG HRHG DYVVVP T G LL+E +G+ A L G AY R G EHNV+N + E VFVE E+K Sbjct: 4 RPQAVPTVQVDNAEVIVTEWRFAPGAETGRHRHGHDYVVVPLTDGTLLLETPEGDRHAPLVAGQAYFRKAGVEHNVINASAHEVVFVETEIK 95
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|19861453|sp|P76518.2|ACOCT_ECOLI (RecName: Full=Acetyl-CoA:oxalate CoA-transferase; Short=ACOCT; AltName: Full=Acetyl-coenzyme A transferase; AltName: Full=CoA:oxalate CoA-transferase) HSP 1 Score: 111.694 bits (278), Expect = 1.097e-26 Identity = 73/187 (39.04%), Postives = 101/187 (54.01%), Query Frame = 0 Query: 1 MGADVVRLE--------RRQGDNLLG--IDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLM 177 MGA V+++E R G + G + Y +N GK SV +DLK++ + +L +ADVL E FRPG ME+L E E NP L+YA +G+G GPL + +D A+SG + G D PV L D GG +YL GI++A+Y + S +G VD A+ D T LS + HGLM Sbjct: 34 MGARVIKVEPPGHGDDTRTFGPYVDGQSLYYSFINHGKESVVLDLKNDHDKSIFINMLKQADVLAENFRPGTMEKLGFSWETLQEINPRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYPDAPPVRVGTSLADLCGG-VYLFSGIVSALYGREKSQRGAHVDIAMFDAT--LSFLEHGLM 217
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|694016538|sp|A9X6P9.1|ACOCT_ACEAC (RecName: Full=Acetyl-CoA:oxalate CoA-transferase; Short=ACOCT; AltName: Full=Acetyl-coenzyme A transferase; AltName: Full=CoA:oxalate CoA-transferase; AltName: Full=CoAT3) HSP 1 Score: 107.071 bits (266), Expect = 6.430e-25 Identity = 63/158 (39.87%), Postives = 93/158 (58.86%), Query Frame = 0 Query: 21 YDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPV-MPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLM 177 + +NRGK S+ ++LK E LE++ +ADVL E FRPGVM+RL E+ + NP L+YA +G+GQ GPLA +D A+SG + A G DG P + L D GG +++ GI +A+Y + +GKG +D ++ D T L+ + H LM Sbjct: 67 FSFVNRGKESIVLNLKDEGDRAIFLEMVRKADVLAENFRPGVMDRLGFNYEELAKINPRLIYASSSGFGQTGPLAHYPAYDTIVQAMSGIMMATGFPDGPPTRVGGTSLSDLCGG-VFMFCGIASALYARERTGKGAHIDVSMFDGT--LAFLQHALM 221
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|39931310|sp|O87838.1|FCTA_STRCO (RecName: Full=Formyl-CoA:oxalate CoA-transferase; Short=FCOCT; AltName: Full=Formyl-coenzyme A transferase; Short=Formyl-CoA transferase) HSP 1 Score: 106.301 bits (264), Expect = 1.495e-24 Identity = 63/179 (35.20%), Postives = 107/179 (59.78%), Query Frame = 0 Query: 1 MGADVVRLERRQGD-------NLLGID---YDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHL 169 +GADVV+LE GD +L +D + +LN KRS+ ++ KSE+G E EL+ R+DV++E F PG ++R+ + E NP +VYA + G+G+ GP + +++ A+ G++S G +DG P+ +GD G G +++ GI+AA+Y+ + +G+GQ V+ A+ +L Sbjct: 30 LGADVVKLEAPHGDITRGQLRDLPDVDSLYFTMLNCNKRSITLNTKSERGKEILTELIRRSDVMVENFGPGAVDRMGFTWDRVKEINPRIVYASIKGFGE-GPYTAFKAYEVVAQAMGGSMSTTGFEDGPPLATGAQIGDSGTG-VHVVAGILAALYQREHTGRGQRVNVAMQHAVLNL 206
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|39931489|sp|Q82M40.1|FCTA_STRAW (RecName: Full=Formyl-CoA:oxalate CoA-transferase; Short=FCOCT; AltName: Full=Formyl-coenzyme A transferase; Short=Formyl-CoA transferase) HSP 1 Score: 103.99 bits (258), Expect = 8.804e-24 Identity = 62/179 (34.64%), Postives = 106/179 (59.22%), Query Frame = 0 Query: 1 MGADVVRLERRQGD-------NLLGID---YDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHL 169 +GADVV+LE GD +L +D + +LN KRS+ ++ K+E+G E EL+ R+DV++E F PG ++R+ + + NP +VYA + G+G DGP +++ A+ G++S G +DG P+ +GD G G ++ GI+AA+Y+ +++G+GQ V+ A+ +L Sbjct: 29 LGADVVKLEAPTGDITRGQLRDLPDVDSLYFTMLNCNKRSITLNTKTERGKEILTELIRRSDVMVENFGPGAVDRMGFTWDRIRDINPRIVYASIKGFG-DGPYTDFKAYEVVAQAMGGSMSTTGFEDGPPLATGAQIGDSGTG-IHAVAGILAALYQRENTGRGQRVNVAMQHAVLNL 205
BLAST of carnitine dehydratase vs. nr
Match: gi|497399692|ref|WP_009713905.1| (CoA transferase [Streptomyces himastatinicus] >gi|302458991|gb|EFL22084.1| putative alpha-methylacyl-CoA racemase [Streptomyces himastatinicus ATCC 53653]) HSP 1 Score: 261.151 bits (666), Expect = 4.303e-81 Identity = 127/207 (61.35%), Postives = 157/207 (75.85%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGID--YDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 +GADVVR++R + L +D YD+ NR KRSV +DLKSE+G + AL L+ RAD+LIEG+RPGV ERL LGP+ C E NP LVY RMTGWGQDGPL+++AGHDI YIA++GAL G+ DG PV P NLLGD+ GG+LYL G++AA+ A+S G GQVVDAAI D TAHL+ +LHG+M WQD+RGSNLLDGG Y +Y AD Sbjct: 40 LGADVVRVDRPERPGGLKVDPAYDLANRNKRSVLLDLKSERGLDAALGLIERADILIEGYRPGVAERLGLGPDTCLERNPRLVYGRMTGWGQDGPLSATAGHDIGYIAITGALGMTGEADGPPVAPANLLGDYAGGSLYLVIGVLAALQHARSGGTGQVVDAAIVDGTAHLTAVLHGMMAAGGWQDRRGSNLLDGGCPFYGTYETAD 246
BLAST of carnitine dehydratase vs. nr
Match: gi|658525831|ref|WP_029720318.1| (CoA transferase [Saccharopolyspora rectivirgula] >gi|658168451|gb|KEI43156.1| carnitine dehydratase [Saccharopolyspora rectivirgula]) HSP 1 Score: 260.381 bits (664), Expect = 5.616e-81 Identity = 129/206 (62.62%), Postives = 153/206 (74.27%), Query Frame = 0 Query: 1 MGADVVRLERR-QGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 +GADVVR++R GD +D+LNRGKRS+ VDLK QG E LEL RADVLIEG RPGV ERL +GPE CWE NP LVY RMTGWGQDGPLAS+AGHDI YIAL+G L A G + G P +P+NLLGDFGGG +YL GI+AA+ EA+ SG+GQVVDAAI D TAHL M++G++ W +RG+NLLD GA Y+ Y AD Sbjct: 32 LGADVVRVDRPGAGDG----KHDLLNRGKRSIVVDLKHAQGAEVVLELARRADVLIEGLRPGVTERLGVGPEQCWEVNPQLVYGRMTGWGQDGPLASTAGHDIAYIALTGMLHAIGRQGGPPQVPINLLGDFGGGGMYLTVGILAALLEARGSGRGQVVDAAIVDGTAHLGMMIYGMLAAGGWSTERGTNLLDTGAPFYDVYETAD 233
BLAST of carnitine dehydratase vs. nr
Match: gi|1027831634|ref|WP_063729150.1| (CoA transferase [Streptomyces sp. RTd22]) HSP 1 Score: 260.766 bits (665), Expect = 5.733e-81 Identity = 127/207 (61.35%), Postives = 156/207 (75.36%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGID--YDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 +GADVVR++R + L +D YD+ NR KRSV +DLKSE+G AL L+ RAD+LIEG+RPGV ERL LGP+ C E NP LVY RMTGWGQDGPL+++AGHDI YIA++GAL G+ DG PV P NLLGD+ GG+LYL G++AA+ A+S G GQVVDAAI D TAHL+ +LHG+M WQD+RGSNLLDGG Y +Y AD Sbjct: 40 LGADVVRVDRPERPGGLKVDPAYDLANRNKRSVLLDLKSERGLGAALGLIERADILIEGYRPGVAERLGLGPDTCLERNPRLVYGRMTGWGQDGPLSATAGHDIGYIAITGALGMTGEADGPPVAPANLLGDYAGGSLYLVIGVLAALQHARSGGTGQVVDAAIVDGTAHLTAVLHGMMAAGGWQDRRGSNLLDGGCPFYGTYETAD 246
BLAST of carnitine dehydratase vs. nr
Match: gi|1264315035|ref|WP_097931775.1| (CoA transferase [Monaibacterium marinum] >gi|1253988574|emb|SOH95351.1| alpha-methylacyl-CoA racemase [Monaibacterium marinum]) HSP 1 Score: 259.225 bits (661), Expect = 9.021e-81 Identity = 127/205 (61.95%), Postives = 157/205 (76.59%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 MGADVVR++R G + ++YDVL RG+RSV +LKS++G E AL+L+ AD++IEGFRPGVMERL LGPE+ NP L+Y RMTGWGQDGPLA AGHDINYIAL+GAL A G++ KP P+NL+GDFGGGA+YL G++AA+ E SG+GQVVDAAI D TAHL M++G+ N WQDQR +N LDG AH+Y Y CAD Sbjct: 28 MGADVVRIDRHDGRDPFPMEYDVLARGRRSVTANLKSDEGRELALKLMDAADLVIEGFRPGVMERLGLGPEEACARNPRLIYGRMTGWGQDGPLAQVAGHDINYIALTGALHAIGEE--KPQPPLNLVGDFGGGAMYLVAGLLAALVERGVSGRGQVVDAAIVDGTAHLMAMIYGMQANKMWQDQRNANPLDGAAHYYRCYACAD 230
BLAST of carnitine dehydratase vs. nr
Match: gi|739707179|ref|WP_037561214.1| (CoA transferase [Alkalispirochaeta odontotermitis] >gi|699058243|gb|KGM43891.1| carnitine dehydratase [Alkalispirochaeta odontotermitis]) HSP 1 Score: 259.61 bits (662), Expect = 1.250e-80 Identity = 123/205 (60.00%), Postives = 155/205 (75.61%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 MGADV+R+ER+ G +L YDV+ R +RSV++DL+ +G LE++S+ D L EGFRPGVME+L LGPE C E NPALVY RMTGWGQ+GPLA +AGHDINYI+L GAL FG K KPV P+N++GDFGGG + LAFG++ A+YEA+ SG+GQVVDAA+ D +A L M +GL W D+RG NLLDGGAH Y++Y AD Sbjct: 28 MGADVIRIERKGGLSLTEPKYDVMMRNRRSVSIDLRKPEGAAGVLEMVSQVDALQEGFRPGVMEKLGLGPEVCLEKNPALVYGRMTGWGQEGPLARAAGHDINYISLCGALHTFGPKGQKPVFPLNMVGDFGGGGMLLAFGMICALYEAQKSGRGQVVDAAMVDGSAALMAMFYGLRAAGIWADERGVNLLDGGAHFYDTYETAD 232
BLAST of carnitine dehydratase vs. nr
Match: gi|759890958|ref|WP_043577558.1| (CoA transferase [Actinopolyspora erythraea] >gi|693610120|gb|KGI79951.1| carnitine dehydratase [Actinopolyspora erythraea] >gi|1234901439|gb|ASU80835.1| CoA transferase [Actinopolyspora erythraea]) HSP 1 Score: 259.61 bits (662), Expect = 1.294e-80 Identity = 129/205 (62.93%), Postives = 157/205 (76.59%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 +GADVVR++R G G D+LNRGKRSV +DLK ++G E L L RADVL+EGFRPGV ERL +GP+ C+E NPALVY RMTGWGQDGPLA +AGHDI+YIALSG L A GD DG P PVNLLGDFGGGA+YLA G++AA+ A++ G GQVVDA+I D +AHL+TMLHG++ W +RG+NLLDGGA Y+ Y +D Sbjct: 38 LGADVVRVDRPGG----GGGEDLLNRGKRSVQLDLKHQRGPEALLALAERADVLLEGFRPGVAERLGIGPDPCFERNPALVYGRMTGWGQDGPLARTAGHDIDYIALSGVLHAIGDADGPPRPPVNLLGDFGGGAMYLAVGVLAALLRARAGGGGQVVDASIVDGSAHLATMLHGMLATGGWSTERGTNLLDGGAPFYDVYATSD 238
BLAST of carnitine dehydratase vs. nr
Match: gi|765002588|ref|WP_044568784.1| (CoA transferase [Streptomyces iranensis] >gi|642952086|emb|CDR05387.1| L-carnitine dehydratase/bile acid-inducibleprotein F [Streptomyces iranensis]) HSP 1 Score: 259.225 bits (661), Expect = 1.901e-80 Identity = 126/207 (60.87%), Postives = 157/207 (75.85%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGID--YDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 MGADVVR++R +G L ID YD+ NR KRSV +DLK++ G L+L+ RAD+LIEG+RPGV E+L LGP+DC NP LVY RMTGWGQ+GPLA +AGHDI YIA++GALS G DG PV PVNLLGD+ GG+LYLA G++AA++ A++ G GQVVDAAI D TAHL+ + HG+M W+DQRG+NLLDGG Y +Y AD Sbjct: 37 MGADVVRVDRPEGAGGLRIDPDYDLANRNKRSVLIDLKADGGTAVVLDLVERADILIEGYRPGVAEKLGLGPDDCLARNPKLVYGRMTGWGQEGPLARTAGHDIGYIAVTGALSMIGAADGPPVAPVNLLGDYAGGSLYLAIGLLAALHHARAGGPGQVVDAAIVDGTAHLTAVTHGMMAAGGWRDQRGTNLLDGGCPFYGTYETAD 243
BLAST of carnitine dehydratase vs. nr
Match: gi|1278919414|gb|PJE06003.1| (carnitine dehydratase [Mycobacterium sp.]) HSP 1 Score: 258.84 bits (660), Expect = 2.559e-80 Identity = 127/207 (61.35%), Postives = 153/207 (73.91%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGID--YDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 +GADVVR++R G L D D+LNRGKRS +DLK + TAL+L++ ADVLIEGFRPGV ERL LGPEDCWE N LVYARMTGWGQ GPLA +AGHDI Y+A++GAL A GD DG P +P+NL+GDFGGG YL GI+AA++EA +SG GQVVDAAI D AHL H ++ W+D+RG NLLDGGA Y++Y AD Sbjct: 29 LGADVVRIDRPTGSELFPGDARVDILNRGKRSAILDLKRPEAVSTALDLVAGADVLIEGFRPGVTERLGLGPEDCWERNRRLVYARMTGWGQSGPLAHTAGHDITYVAITGALGAIGDADGPPQIPLNLVGDFGGGGAYLVIGILAALHEATTSGLGQVVDAAIVDGAAHLLAGTHAMLATGTWRDERGVNLLDGGAPFYSTYATAD 235
BLAST of carnitine dehydratase vs. nr
Match: gi|1224908099|ref|WP_092924073.1| (CoA transferase [Actinopolyspora alba] >gi|1098128873|emb|SFD72439.1| alpha-methylacyl-CoA racemase [Actinopolyspora alba]) HSP 1 Score: 258.84 bits (660), Expect = 2.933e-80 Identity = 128/205 (62.44%), Postives = 156/205 (76.10%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 +GADVVR+ER G + D+LNRGKRSV VDLK E+G ET L L RAD+L+EGFRPGV ERL +GPE C+E NP LVY RMTGWGQDGPLA +AGHDI+YIA+SG L G+ DG P +PVNLLGDFGGGA+YLA G++AA A++ G GQVVDA+I D +AHL+TMLHG++ W +RG+NLLDGGA Y+ Y +D Sbjct: 38 LGADVVRVERPTGGS---GKEDLLNRGKRSVRVDLKHERGPETVLALAERADILLEGFRPGVAERLGVGPEPCFERNPDLVYGRMTGWGQDGPLADTAGHDIDYIAISGVLHTIGEADGPPRIPVNLLGDFGGGAMYLAVGVLAAQLRARAGGGGQVVDASIVDGSAHLATMLHGMLATGGWDTRRGANLLDGGAPFYDVYATSD 239
BLAST of carnitine dehydratase vs. nr
Match: gi|943923543|ref|WP_055558267.1| (CoA transferase [Streptomyces sp. NBRC 110028]) HSP 1 Score: 257.684 bits (657), Expect = 8.366e-80 Identity = 127/207 (61.35%), Postives = 157/207 (75.85%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGID--YDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 +GADVVR++R L ID YD+ NR KRSV +DLKSE+G + AL L+ RAD+LIEG+RPGV ERL LGP+ C + NP LVY RMTGWGQDGPLA++AGHDI YIA++GAL G+ DG PV P NLLGD+ GG+LYL G++AA+ A+S G GQVVDAAI D TAHL+ +LHG+M W+D+RGSNLLDGG+ Y +Y AD Sbjct: 40 LGADVVRVDRPGRPGGLKIDPAYDLANRNKRSVLLDLKSERGRDAALGLVERADILIEGYRPGVAERLGLGPDTCLDRNPRLVYGRMTGWGQDGPLAATAGHDIGYIAITGALGMTGEADGPPVAPANLLGDYAGGSLYLVIGVLAALQHARSGGTGQVVDAAIVDGTAHLTAVLHGMMAAGGWRDRRGSNLLDGGSPFYGTYETAD 246 The following BLAST results are available for this feature:
BLAST of carnitine dehydratase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of carnitine dehydratase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of carnitine dehydratase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1_size3401120:176202..177504- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold1_size3401120-processed-gene-1.35 ID=snap_masked-scaffold1_size3401120-processed-gene-1.35|Name=carnitine dehydratase|organism=Tigriopus kingsejongensis|type=gene|length=1303bp|location=Sequence derived from alignment at scaffold1_size3401120:176202..177504- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'carnitine dehydratase' has the following synonyms
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