carnitine dehydratase, snap_masked-scaffold1_size3401120-processed-gene-1.35 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of carnitine dehydratase vs. L. salmonis genes
Match: EMLSAG00000001226 (supercontig:LSalAtl2s:LSalAtl2s11:421277:423175:1 gene:EMLSAG00000001226 transcript:EMLSAT00000001226 description:"maker-LSalAtl2s11-augustus-gene-4.11") HSP 1 Score: 189.119 bits (479), Expect = 3.023e-57 Identity = 98/215 (45.58%), Postives = 142/215 (66.05%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDY-DVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQD-GPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYE--AKSSGKGQVVDAAISDCTAHLSTMLH-GLMFNNRWQDQRGSNLLDGGAHHYNSYRCADDNLHL 210 GA V+R++ + Y DV RGK+S++++LKS +G +L++ +DV +E FRPGVME+L+L P+ + NP+L+YAR++G+GQ+ PL AGHDINYI+LSGALS G + KPV P+N++GDFGGG L AFGI+AA+YE SSGKGQ++D I+ ++LST L+ + W + RG N+LD GAH Y Y + ++ Sbjct: 27 FGASVIRVDNHPD----AVVYPDVSCRGKKSISLNLKSSKGRSIVKKLVNNSDVFLESFRPGVMEKLQLCPDVLTKENPSLIYARLSGYGQEHNPLTYRAGHDINYISLSGALSKIGRVNEKPVPPINIVGDFGGGGLTCAFGIIAALYERSVNSSGKGQIIDCGITQGASYLSTWLYQSKNIPHLWGNPRGENVLDTGAHFYEVYETKEPGKYI 237
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|341940628|sp|O09174.4|AMACR_MOUSE (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-methylacyl-CoA racemase) HSP 1 Score: 195.667 bits (496), Expect = 2.814e-58 Identity = 100/207 (48.31%), Postives = 133/207 (64.25%), Query Frame = 0 Query: 1 MGADVVRLER--RQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 GA+VVR+ R G+N L RGKRS+A+DLK QG + +RADVL+E FR GVME+L+LGPE + NP L+YAR++G+GQ G + AGHDINY+ALSG LS G P P+NLL DFGGG L GI+ A++E SG+GQV+D+++ + TA+LS+ L W+ RG N+LDGGA Y +Y+ AD Sbjct: 27 FGAEVVRVNRLGSTGENFLA-------RGKRSLALDLKRSQGVTVLRRMCARADVLLEPFRCGVMEKLQLGPETLLQDNPKLIYARLSGFGQSGIFSKVAGHDINYLALSGVLSKIGRSGENPYPPLNLLADFGGGGLMCTLGIVLALFERTRSGRGQVIDSSMVEGTAYLSSFLWKTQPMGLWKQPRGQNILDGGAPFYTTYKTAD 226
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|313104070|sp|Q9UHK6.2|AMACR_HUMAN (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-methylacyl-CoA racemase) HSP 1 Score: 190.274 bits (482), Expect = 3.466e-56 Identity = 101/207 (48.79%), Postives = 130/207 (62.80%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDYDV--LNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 GA VVR++R G YDV L RGKRS+ +DLK +G L R+DVL+E FR GVME+L+LGPE NP L+YAR++G+GQ G AGHDINY+ALSG LS G P P+NLL DF GG L A GI+ A+++ +GKGQV+DA + + TA+LS+ L + W+ RG N+LDGGA Y +YR AD Sbjct: 27 FGARVVRVDRP------GSRYDVSRLGRGKRSLVLDLKQPRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFCRLAGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTGKGQVIDANMVEGTAYLSSFLWKTQKLSLWEAPRGQNMLDGGAPFYTTYRTAD 227
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|13637497|sp|P70473.3|AMACR_RAT (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-arylpropionyl-CoA epimerase; AltName: Full=2-methylacyl-CoA racemase) HSP 1 Score: 186.808 bits (473), Expect = 5.888e-55 Identity = 100/205 (48.78%), Postives = 127/205 (61.95%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 GA+VV ++R N L RGKRS+A+DLK G + +RADVL+E FR GVME+L+LGPE + NP L+YAR++G+GQ G + AGHDINY+ALSG LS G P P+NLL DFGGG L GI+ A++E SG GQV+DA + + TA+LST L W RG NLLDGGA Y +Y+ AD Sbjct: 27 FGAEVVLVDRLGSVN----HPSHLARGKRSLALDLKRSPGAAVLRRMCARADVLLEPFRCGVMEKLQLGPETLRQDNPKLIYARLSGFGQSGIFSKVAGHDINYVALSGVLSKIGRSGENPYPPLNLLADFGGGGLMCTLGILLALFERTRSGLGQVIDANMVEGTAYLSTFLWKTQAMGLWAQPRGQNLLDGGAPFYTTYKTAD 227
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|74620364|sp|Q8J0F0.1|CEFD2_ACRCH (RecName: Full=Isopenicillin N epimerase component 2; Short=IPN epimerase component 2; AltName: Full=Isopenicillin N epimerase acyl-CoA racemase component) HSP 1 Score: 156.377 bits (394), Expect = 2.894e-43 Identity = 91/205 (44.39%), Postives = 118/205 (57.56%), Query Frame = 0 Query: 2 GADVVRLERRQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGP-EDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 GA V+R+ D DVL R K S+ +DLK + L +LSRADVLI+ FRPGV+ERL L P E +AN LV AR+TG+ +DG AGHDINY+A+SG L+ G P P N+LGDF GG GI+ A+ ++G GQVV+A + D +A+L+TM W RG N+LDGG Y +YR D Sbjct: 34 GASVLRI-----DGPRSPKGDVLARNKSSICIDLKHPPSRKVLLSILSRADVLIDPFRPGVLERLGLSPTEVLLKANARLVVARLTGFRRDGKYQDMAGHDINYLAVSGVLAMLGRAGENPFPPANILGDFAGGGAMCVVGILLALVSRDATGLGQVVEANMVDGSAYLATMPRLATKTPFWGSPRGENVLDGGCPWYATYRTKD 233
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|29840845|sp|Q09618.3|YS74_CAEEL (RecName: Full=CaiB/baiF CoA-transferase family protein ZK892.4) HSP 1 Score: 130.954 bits (328), Expect = 4.291e-34 Identity = 74/211 (35.07%), Postives = 119/211 (56.40%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAF-GDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVY-EAKSSGKGQVVDAAISDCTAHLSTML-HGLMFNNRWQDQRGSNLLDGGAHHYNSYRCADDNL 208 GADV ++++ I+ LNRGK +DLK+ + + +L +DVL++ +RPG +E++ L P W N L+ +++G+GQ G ++ GHDINY+ALSG L F G +P P N+L DF GG L AFGI++A+Y + + GKG ++D ++++ A+LS+ + H N + D+ L G Y +Y+ DD Sbjct: 29 FGADVTVIDKKNP----AIE-QRLNRGKTMKQLDLKNPEDIKKVRDLCQTSDVLLDPYRPGTLEKMGLDPSTLWNNNKGLIICKISGYGQTGRMSQETGHDINYVALSGMLPTFSGVNATRPWPPANMLADFAGGGLSAAFGILSAIYARSHNGGKGCLLDCSMTEGVAYLSSFVQHYYDQPNLFTDKYA--LFSGECPIYRTYKTKDDKF 232
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|81542073|sp|Q9I701.1|BAUB_PSEAE (RecName: Full=Beta-alanine degradation protein BauB) HSP 1 Score: 120.553 bits (301), Expect = 6.073e-33 Identity = 58/92 (63.04%), Postives = 67/92 (72.83%), Query Frame = 0 Query: 247 RPQAVPTVQLDNDKVLVTEWRFPPGGETGWHRHGMDYVVVPQTTGQLLIELSDGEMRADLTTGVAYARVEGTEHNVVNDNDFEFVFVEVELK 338 RPQAVPTVQ+DN +V+VTEWRF PG ETG HRHG DYVVVP T G LL+E +G+ A L G AY R G EHNV+N + E VFVE E+K Sbjct: 4 RPQAVPTVQVDNAEVIVTEWRFAPGAETGRHRHGHDYVVVPLTDGTLLLETPEGDRHAPLVAGQAYFRKAGVEHNVINASAHEVVFVETEIK 95
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|19861453|sp|P76518.2|ACOCT_ECOLI (RecName: Full=Acetyl-CoA:oxalate CoA-transferase; Short=ACOCT; AltName: Full=Acetyl-coenzyme A transferase; AltName: Full=CoA:oxalate CoA-transferase) HSP 1 Score: 111.694 bits (278), Expect = 1.097e-26 Identity = 73/187 (39.04%), Postives = 101/187 (54.01%), Query Frame = 0 Query: 1 MGADVVRLE--------RRQGDNLLG--IDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLM 177 MGA V+++E R G + G + Y +N GK SV +DLK++ + +L +ADVL E FRPG ME+L E E NP L+YA +G+G GPL + +D A+SG + G D PV L D GG +YL GI++A+Y + S +G VD A+ D T LS + HGLM Sbjct: 34 MGARVIKVEPPGHGDDTRTFGPYVDGQSLYYSFINHGKESVVLDLKNDHDKSIFINMLKQADVLAENFRPGTMEKLGFSWETLQEINPRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYPDAPPVRVGTSLADLCGG-VYLFSGIVSALYGREKSQRGAHVDIAMFDAT--LSFLEHGLM 217
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|694016538|sp|A9X6P9.1|ACOCT_ACEAC (RecName: Full=Acetyl-CoA:oxalate CoA-transferase; Short=ACOCT; AltName: Full=Acetyl-coenzyme A transferase; AltName: Full=CoA:oxalate CoA-transferase; AltName: Full=CoAT3) HSP 1 Score: 107.071 bits (266), Expect = 6.430e-25 Identity = 63/158 (39.87%), Postives = 93/158 (58.86%), Query Frame = 0 Query: 21 YDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPV-MPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLM 177 + +NRGK S+ ++LK E LE++ +ADVL E FRPGVM+RL E+ + NP L+YA +G+GQ GPLA +D A+SG + A G DG P + L D GG +++ GI +A+Y + +GKG +D ++ D T L+ + H LM Sbjct: 67 FSFVNRGKESIVLNLKDEGDRAIFLEMVRKADVLAENFRPGVMDRLGFNYEELAKINPRLIYASSSGFGQTGPLAHYPAYDTIVQAMSGIMMATGFPDGPPTRVGGTSLSDLCGG-VFMFCGIASALYARERTGKGAHIDVSMFDGT--LAFLQHALM 221
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|39931310|sp|O87838.1|FCTA_STRCO (RecName: Full=Formyl-CoA:oxalate CoA-transferase; Short=FCOCT; AltName: Full=Formyl-coenzyme A transferase; Short=Formyl-CoA transferase) HSP 1 Score: 106.301 bits (264), Expect = 1.495e-24 Identity = 63/179 (35.20%), Postives = 107/179 (59.78%), Query Frame = 0 Query: 1 MGADVVRLERRQGD-------NLLGID---YDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHL 169 +GADVV+LE GD +L +D + +LN KRS+ ++ KSE+G E EL+ R+DV++E F PG ++R+ + E NP +VYA + G+G+ GP + +++ A+ G++S G +DG P+ +GD G G +++ GI+AA+Y+ + +G+GQ V+ A+ +L Sbjct: 30 LGADVVKLEAPHGDITRGQLRDLPDVDSLYFTMLNCNKRSITLNTKSERGKEILTELIRRSDVMVENFGPGAVDRMGFTWDRVKEINPRIVYASIKGFGE-GPYTAFKAYEVVAQAMGGSMSTTGFEDGPPLATGAQIGDSGTG-VHVVAGILAALYQREHTGRGQRVNVAMQHAVLNL 206
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|39931489|sp|Q82M40.1|FCTA_STRAW (RecName: Full=Formyl-CoA:oxalate CoA-transferase; Short=FCOCT; AltName: Full=Formyl-coenzyme A transferase; Short=Formyl-CoA transferase) HSP 1 Score: 103.99 bits (258), Expect = 8.804e-24 Identity = 62/179 (34.64%), Postives = 106/179 (59.22%), Query Frame = 0 Query: 1 MGADVVRLERRQGD-------NLLGID---YDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHL 169 +GADVV+LE GD +L +D + +LN KRS+ ++ K+E+G E EL+ R+DV++E F PG ++R+ + + NP +VYA + G+G DGP +++ A+ G++S G +DG P+ +GD G G ++ GI+AA+Y+ +++G+GQ V+ A+ +L Sbjct: 29 LGADVVKLEAPTGDITRGQLRDLPDVDSLYFTMLNCNKRSITLNTKTERGKEILTELIRRSDVMVENFGPGAVDRMGFTWDRIRDINPRIVYASIKGFG-DGPYTDFKAYEVVAQAMGGSMSTTGFEDGPPLATGAQIGDSGTG-IHAVAGILAALYQRENTGRGQRVNVAMQHAVLNL 205
BLAST of carnitine dehydratase vs. nr
Match: gi|740113365|ref|WP_037962258.1| (CoA transferase [Streptomyces sp. PRh5] >gi|594127811|gb|EXU63123.1| carnitine dehydratase [Streptomyces sp. PRh5]) HSP 1 Score: 257.299 bits (656), Expect = 8.542e-80 Identity = 125/207 (60.39%), Postives = 156/207 (75.36%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGID--YDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 +GADVVR++R G L ID YD+ NR KRSV +DLKS+ G L+L+ RAD+L+EG+RPGV E+L LGP+DC NP LVY RMTGWGQ+GPLA +AGHDI YIA++GALS G DG PV PVNLLGD+ GG+LYL G++AA++ A++ G GQVVDAAI D TAHL+ ++HG+M W+DQRGSNLLDGG Y +Y AD Sbjct: 37 LGADVVRVDRPGGTGGLRIDPDYDLANRNKRSVLIDLKSDGGTAVVLDLVERADILVEGYRPGVAEKLGLGPDDCLARNPKLVYGRMTGWGQEGPLARTAGHDIGYIAVTGALSMIGAADGPPVAPVNLLGDYAGGSLYLVIGLLAALHHARAGGPGQVVDAAIVDGTAHLTAVIHGMMAAGGWRDQRGSNLLDGGCPFYGTYETAD 243
BLAST of carnitine dehydratase vs. nr
Match: gi|827463579|ref|WP_047223344.1| (MULTISPECIES: CoA transferase [Frankia] >gi|827094156|gb|KLL11170.1| carnitine dehydratase [Frankia coriariae] >gi|1139647419|gb|ONH35827.1| carnitine dehydratase [Frankia sp. BMG5.30]) HSP 1 Score: 258.07 bits (658), Expect = 9.704e-80 Identity = 123/208 (59.13%), Postives = 157/208 (75.48%), Query Frame = 0 Query: 1 MGADVVRLERR-QGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCADDN 207 +GADV+R++R + ++++ DVL RG+RSVA+DL+S G L+L RADVLIEG+RPGV ERL +GP DCW NP LVY RMTGWGQDGPLA +AGHDI YIA++GAL A G + +P +PVN LGDFGGG+LYL G++AAV+EA SG+GQVVDAAI D A L+ M++GL+ +W+D+RG NLLD G Y+ YR ADDN Sbjct: 46 LGADVIRVDRPGEANDIVPPAVDVLRRGRRSVAIDLRSPDGVRAVLDLAERADVLIEGYRPGVAERLGVGPRDCWARNPRLVYGRMTGWGQDGPLAPTAGHDIGYIAITGALHALGRQGEEPAVPVNFLGDFGGGSLYLVVGVLAAVFEAARSGRGQVVDAAIVDGAASLTAMVYGLLAAGQWRDERGVNLLDTGRPWYDVYRTADDN 253
BLAST of carnitine dehydratase vs. nr
Match: gi|1197972071|ref|WP_086882983.1| (CoA transferase [Streptomyces rhizosphaericus]) HSP 1 Score: 257.299 bits (656), Expect = 9.725e-80 Identity = 125/207 (60.39%), Postives = 156/207 (75.36%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGID--YDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 +GADVVR++R G L ID YD+ NR KRSV +DLKS+ G L+L+ RAD+L+EG+RPGV E+L LGP+DC NP LVY RMTGWGQ+GPLA +AGHDI YIA++GALS G DG PV PVNLLGD+ GG+LYL G++AA++ A++ G GQVVDAAI D TAHL+ ++HG+M W+DQRGSNLLDGG Y +Y AD Sbjct: 37 LGADVVRVDRPGGAGGLRIDPDYDLANRNKRSVLIDLKSDGGTAVVLDLVERADILVEGYRPGVAEKLGLGPDDCLARNPKLVYGRMTGWGQEGPLARTAGHDIGYIAVTGALSMIGAADGPPVAPVNLLGDYAGGSLYLVIGLLAALHHARAGGPGQVVDAAIVDGTAHLTAVIHGMMAAGGWRDQRGSNLLDGGCPFYGTYETAD 243
BLAST of carnitine dehydratase vs. nr
Match: gi|1321733304|gb|PLX43883.1| (carnitine dehydratase [Deltaproteobacteria bacterium]) HSP 1 Score: 256.914 bits (655), Expect = 1.037e-79 Identity = 127/208 (61.06%), Postives = 151/208 (72.60%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDYD---VLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 MGADVVR+E L L RG+ S+ ++LK E LEL+++AD LIEGFRPGVMERL LGP+ C E NP L Y RMTGWGQ+GPLA+ AGHDINYIALSGALS G KDGKP +P+NL+GDFGGG + LAFGI+ AV+EA SGKGQVVDAA+ D A L+TM+ M WQ++RG+NLLDGGAH YN+Y CAD Sbjct: 29 MGADVVRIENPTKRVPLPGPTGPRAFLKRGRESIKLNLKEPNEVERVLELIAKADALIEGFRPGVMERLGLGPDRCLERNPRLAYGRMTGWGQNGPLANHAGHDINYIALSGALSTIGPKDGKPTIPLNLIGDFGGGGMLLAFGILCAVFEASKSGKGQVVDAAMLDGAALLTTMVRSFMEEGLWQEKRGTNLLDGGAHFYNTYECAD 236
BLAST of carnitine dehydratase vs. nr
Match: gi|1086792321|emb|SDP69826.1| (alpha-methylacyl-CoA racemase [Actinopolyspora xinjiangensis]) HSP 1 Score: 257.299 bits (656), Expect = 1.042e-79 Identity = 129/205 (62.93%), Postives = 156/205 (76.10%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 +GADVVR++R G D+LNRGKRSV +DLK E+G E L L RADVL+EGFRPGV ERL +GP+ C+E NP LVY RMTGWGQDGPLA SAGHDI+YIALSG L+A GD DG P PVNLLGDFGGGA+YLA G++AA+ A++ G GQVVDA+I D +AHL+TMLHG++ W +RG+NLLDGGA Y+ Y +D Sbjct: 38 LGADVVRVDRPGA----GGGEDLLNRGKRSVQLDLKHERGPEALLALAGRADVLLEGFRPGVAERLGIGPDPCFEHNPDLVYGRMTGWGQDGPLARSAGHDIDYIALSGVLNAIGDADGPPRPPVNLLGDFGGGAMYLAVGVLAALLRARAGGGGQVVDASIVDGSAHLATMLHGMLATGGWSTERGTNLLDGGAPFYDVYATSD 238 The following BLAST results are available for this feature:
BLAST of carnitine dehydratase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of carnitine dehydratase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of carnitine dehydratase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1_size3401120:176202..177504- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold1_size3401120-processed-gene-1.35 ID=snap_masked-scaffold1_size3401120-processed-gene-1.35|Name=carnitine dehydratase|organism=Tigriopus kingsejongensis|type=gene|length=1303bp|location=Sequence derived from alignment at scaffold1_size3401120:176202..177504- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'carnitine dehydratase' has the following synonyms
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