carnitine dehydratase, snap_masked-scaffold1_size3401120-processed-gene-1.35 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of carnitine dehydratase vs. L. salmonis genes
Match: EMLSAG00000001226 (supercontig:LSalAtl2s:LSalAtl2s11:421277:423175:1 gene:EMLSAG00000001226 transcript:EMLSAT00000001226 description:"maker-LSalAtl2s11-augustus-gene-4.11") HSP 1 Score: 189.119 bits (479), Expect = 3.023e-57 Identity = 98/215 (45.58%), Postives = 142/215 (66.05%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDY-DVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQD-GPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYE--AKSSGKGQVVDAAISDCTAHLSTMLH-GLMFNNRWQDQRGSNLLDGGAHHYNSYRCADDNLHL 210 GA V+R++ + Y DV RGK+S++++LKS +G +L++ +DV +E FRPGVME+L+L P+ + NP+L+YAR++G+GQ+ PL AGHDINYI+LSGALS G + KPV P+N++GDFGGG L AFGI+AA+YE SSGKGQ++D I+ ++LST L+ + W + RG N+LD GAH Y Y + ++ Sbjct: 27 FGASVIRVDNHPD----AVVYPDVSCRGKKSISLNLKSSKGRSIVKKLVNNSDVFLESFRPGVMEKLQLCPDVLTKENPSLIYARLSGYGQEHNPLTYRAGHDINYISLSGALSKIGRVNEKPVPPINIVGDFGGGGLTCAFGIIAALYERSVNSSGKGQIIDCGITQGASYLSTWLYQSKNIPHLWGNPRGENVLDTGAHFYEVYETKEPGKYI 237
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|226700866|sp|B6JE29.1|FCTA_OLICO (RecName: Full=Formyl-CoA:oxalate CoA-transferase; Short=FCOCT; AltName: Full=Formyl-coenzyme A transferase; Short=Formyl-CoA transferase) HSP 1 Score: 95.1301 bits (235), Expect = 1.425e-20 Identity = 61/180 (33.89%), Postives = 95/180 (52.78%), Query Frame = 0 Query: 1 MGADVVRLERR-QGD----------NLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHL 169 GADV+++ER GD N + + +LN KRS+ +D K+ +G E L+ DV++E F PGV++R+ E+ + NP L+ A + G+G GP ++ G+ S G +DG P++ +GD G G L+LA GI+ A++ SGKGQ V A+ D +L Sbjct: 29 FGADVIKVERPGTGDITRGQLQDVPNADSLYFTMLNHNKRSITLDAKNPKGKEVLTALIKSCDVMVENFAPGVLDRMGFSWENIQKINPKLIVASIKGFGP-GPFEDCKVYENVAQCTGGSASTTGFRDGLPLVTGAQIGDSGTG-LHLALGIVTALFHRTHSGKGQRVTVAMQDSVLNL 206
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|71152392|sp|Q68FU4.1|SUCHY_RAT (RecName: Full=Succinate--hydroxymethylglutarate CoA-transferase; AltName: Full=SuccinylCoA:glutarate-CoA transferase; Flags: Precursor) HSP 1 Score: 94.7449 bits (234), Expect = 1.735e-20 Identity = 67/224 (29.91%), Postives = 108/224 (48.21%), Query Frame = 0 Query: 1 MGADVVRLERR-QGD----------NLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVD-----AAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCADDNL 208 +GA+V+++ER GD N + +NR K+S+AV++K +G EL + DV +E + PG + + LG D + P +VY +TG+GQ GP++ AG+D A+SG + G +DG PV P + D G L+ IMA + + +GKG +D + ++ T + L G RW GS + Y +++ D L Sbjct: 63 LGAEVIKVERPGAGDDTRSWGPPFVNTESTYFLSVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYADIDKIAPHIVYCSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATG-LFAYGAIMAGLIQRYRTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSIV------PYQAFKTKDGYL 279
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|57012792|sp|Q6N8F8.2|FCTA_RHOPA (RecName: Full=Formyl-CoA:oxalate CoA-transferase; Short=FCOCT; AltName: Full=Formyl-coenzyme A transferase; Short=Formyl-CoA transferase) HSP 1 Score: 94.3597 bits (233), Expect = 2.629e-20 Identity = 61/180 (33.89%), Postives = 97/180 (53.89%), Query Frame = 0 Query: 1 MGADVVRLERR--------QGDNLLGID---YDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHL 169 GADV+++ER Q ++ +D + +LN KRS+ +D K+ +G E L+ DVL+E F PGV++R+ E E NP ++ A + G+G GP ++ GA S G ++G P++ +GD G G L+LA GI+ A+Y+ +G+GQ V AA+ D +L Sbjct: 29 FGADVIKVERPGSGDITRGQLQDIPKVDSLYFTMLNHNKRSITLDTKNPKGKEVLTALIRTCDVLVENFGPGVLDRMGFTWEKIQEINPRMIVASIKGFGP-GPYEDCKVYENVAQCTGGAASTTGFREGLPLVTGAQIGDSGTG-LHLALGIVTALYQRHHTGRGQRVTAAMQDGVLNL 206
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|226700867|sp|B3QBS6.1|FCTA_RHOPT (RecName: Full=Formyl-CoA:oxalate CoA-transferase; Short=FCOCT; AltName: Full=Formyl-coenzyme A transferase; Short=Formyl-CoA transferase) HSP 1 Score: 94.3597 bits (233), Expect = 2.732e-20 Identity = 61/180 (33.89%), Postives = 97/180 (53.89%), Query Frame = 0 Query: 1 MGADVVRLERR--------QGDNLLGID---YDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHL 169 GADV+++ER Q ++ +D + +LN KRS+ +D K+ +G E L+ DVL+E F PGV++R+ E E NP ++ A + G+G GP ++ GA S G ++G P++ +GD G G L+LA GI+ A+Y+ +G+GQ V AA+ D +L Sbjct: 29 FGADVIKVERPGSGDITRGQLQDIPKVDSLYFTMLNHNKRSITLDTKNPKGKEVLTALIRTCDVLVENFGPGVLDRMGFTWEKIQEINPRMIVASIKGFGP-GPYEDCKVYENVAQCTGGAASTTGFREGLPLVTGAQIGDSGTG-LHLALGIVTALYQRHHTGRGQRVTAAMQDGVLNL 206
BLAST of carnitine dehydratase vs. SwissProt
Match: gi|667467188|sp|A9WC39.1|SMTB_CHLAA (RecName: Full=Succinyl-CoA--L-malate CoA-transferase beta subunit >gi|667467189|sp|Q1KLK0.1|SMTB_CHLAU RecName: Full=Succinyl-CoA--L-malate CoA-transferase beta subunit) HSP 1 Score: 90.8929 bits (224), Expect = 3.103e-19 Identity = 65/216 (30.09%), Postives = 104/216 (48.15%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLL-----------GIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMP-VNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLS-TMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRC 203 GADV+++E G + L + + +R KRSV ++L+ +G EL++ +DVL E FRPG +E+ LG + + NP L+ R+TG+GQ GP G A+ G G G PV P L D+ G LY G++ A+ + +G+GQ +DAA+ + S ++ + +++ GS HYN + C Sbjct: 34 FGADVLKVEHPIGGDALRRFGTPTARGDTLTWLSESRNKRSVTLNLQHPEGARVFKELIAHSDVLCENFRPGTLEKWGLGWDVLSKINPRLIMLRVTGYGQTGPYRDRPGFARIAHAVGGIAYLAGMPKGTPVTPGSTTLADYMTG-LYGCIGVLLALRHREQTGRGQYIDAALYESVFRCSDELVPAYGMYRKVRERHGS--------HYNEFAC 240
BLAST of carnitine dehydratase vs. nr
Match: gi|1222215597|ref|WP_090270218.1| (CoA transferase [Litorimicrobium taeanense] >gi|1103310055|emb|SEQ59434.1| alpha-methylacyl-CoA racemase [Litorimicrobium taeanense]) HSP 1 Score: 275.404 bits (703), Expect = 4.866e-87 Identity = 130/207 (62.80%), Postives = 168/207 (81.16%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCADDN 207 +GADVVRLER Q YDVL+RG+RSV+VDLKS++G +TAL+L+S+AD LIEGFRPGVMERL LGPE C E NPALV+ RMTGWGQ GPLA++AGHDINYI+L+GAL+A G + PV P+NL+GDFGGG++YLA GI++A+ EAKSSG+GQVVDAA++D AHL ++++ + RW D+R SNLLDG A Y +++CAD++ Sbjct: 28 LGADVVRLERPQNGASKESAYDVLSRGRRSVSVDLKSKEGVDTALQLISKADALIEGFRPGVMERLGLGPEVCLELNPALVFGRMTGWGQFGPLANAAGHDINYISLTGALAAIGTAESGPVAPLNLVGDFGGGSMYLAIGILSAILEAKSSGQGQVVDAAMTDGAAHLMSLMYSMKNAGRWSDERASNLLDGSAPFYGTFKCADES 234
BLAST of carnitine dehydratase vs. nr
Match: gi|1200334498|gb|OUU54944.1| (carnitine dehydratase [Proteobacteria bacterium TMED61]) HSP 1 Score: 273.863 bits (699), Expect = 2.042e-86 Identity = 134/206 (65.05%), Postives = 162/206 (78.64%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFG-DKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 MGADVVR++R G N LG+ DVLNRG+RSVA++LKS +G T LEL++RAD +IEGFRPGVMERL LGP++C NP LVY RMTGWGQDGPLA +AGHDINYIA++G L A G DK P P+NL+GDFGGGALYLAFG++ A+ E + SGKGQVVDAA+ D AHL TM++GL+ +W DQR NLLDGGAH Y ++ CAD Sbjct: 30 MGADVVRIDREGGTNPLGLKVDVLNRGRRSVALNLKSSEGVTTCLELIARADAVIEGFRPGVMERLGLGPDECLAKNPRLVYGRMTGWGQDGPLAQAAGHDINYIAIAGVLDAIGTDKAVTP--PLNLVGDFGGGALYLAFGVVXALLEVRGSGKGQVVDAAMVDGAAHLMTMMYGLLQQGQWTDQRQDNLLDGGAHFYGTFECAD 233
BLAST of carnitine dehydratase vs. nr
Match: gi|737775053|ref|WP_035743063.1| (CoA transferase [Haematobacter missouriensis] >gi|672903451|gb|KFI33057.1| hypothetical protein CG51_16005 [Haematobacter missouriensis] >gi|1207784202|gb|OWJ79830.1| CoA transferase [Haematobacter missouriensis] >gi|1207791367|gb|OWJ86583.1| CoA transferase [Haematobacter missouriensis]) HSP 1 Score: 265.774 bits (678), Expect = 2.611e-83 Identity = 132/205 (64.39%), Postives = 162/205 (79.02%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 MGA+V+R+ER ++LLG+DYD+LNRG+ + +DLK+ + TA L+SRAD LIEG RPGVMERL LGP D E NP LVY RMTGWGQ GPLA +AGHDINYI+LSGAL A G ++ P +P+NL+GDFGGGALYLAFG+ AA+ EA SG+GQVVDAAI+D TAHL +M++G+ RWQD+RG+NLLDGGA Y YRCAD Sbjct: 32 MGAEVIRIERPGSESLLGLDYDILNRGRGFIRLDLKNAEDRTTARGLVSRADALIEGMRPGVMERLGLGPSDFPE-NPKLVYGRMTGWGQTGPLAPAAGHDINYISLSGALHAIGPEE-MPAVPLNLIGDFGGGALYLAFGMAAALLEAARSGRGQVVDAAITDGTAHLMSMIYGMRAGGRWQDRRGANLLDGGAPEYGCYRCAD 234
BLAST of carnitine dehydratase vs. nr
Match: gi|1208952285|ref|WP_088215052.1| (CoA transferase [Haematobacter genomosp. 1] >gi|1207783421|gb|OWJ79076.1| CoA transferase [Haematobacter genomosp. 1]) HSP 1 Score: 265.003 bits (676), Expect = 5.255e-83 Identity = 131/205 (63.90%), Postives = 162/205 (79.02%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 MGA+V+R+ER ++LLG+DYD+LNRG+ + +DLK+ + TA L+SRAD LIEG RPGVMERL LGP+D E NP LVY RMTGWGQ GPLA +AGHDINYI+LSGAL A G ++ P +P+NL+GDFGGGALYLAFG+ AA+ EA SG+GQVVDAAI+D T HL +M++G+ RWQD+RG+NLLDGGA Y YRCAD Sbjct: 29 MGAEVIRIERPGSESLLGLDYDILNRGRGFIRLDLKNAEDRATARALVSRADALIEGMRPGVMERLGLGPDDFPE-NPRLVYGRMTGWGQTGPLAPAAGHDINYISLSGALHAIGPQE-MPAVPLNLIGDFGGGALYLAFGMAAALLEAARSGRGQVVDAAITDGTVHLMSMIYGMRAGGRWQDRRGANLLDGGAPEYGCYRCAD 231
BLAST of carnitine dehydratase vs. nr
Match: gi|1200313573|gb|OUU34746.1| (carnitine dehydratase [Proteobacteria bacterium TMED51] >gi|1200337527|gb|OUU57862.1| carnitine dehydratase [Candidatus Endolissoclinum sp. TMED55]) HSP 1 Score: 265.003 bits (676), Expect = 5.465e-83 Identity = 129/205 (62.93%), Postives = 158/205 (77.07%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 MGADVVR++R G N L + DVLNRG+RSVA++LK+ +G TAL L++RAD +IEG+RPGVMERL LGPE+C NP LVY RMTGWGQ GPLA +AGHDINYIAL+G L A G D P+NL+GDFGGGALYLAFG++ A+ EA+ SG+GQVVDAA+ D AHL TM++GL +W D+R NLLDGGAH Y ++ CAD Sbjct: 28 MGADVVRIDREGGSNPLDLKIDVLNRGRRSVALNLKTPEGIATALALIARADAVIEGYRPGVMERLGLGPEECLAKNPCLVYGRMTGWGQAGPLAHAAGHDINYIALTGVLDAIG-TDESVTPPLNLVGDFGGGALYLAFGVVCALLEARGSGEGQVVDAAMVDGAAHLMTMMYGLTQQGKWTDKRQDNLLDGGAHFYGAFECAD 231
BLAST of carnitine dehydratase vs. nr
Match: gi|1226714884|ref|WP_093967043.1| (CoA transferase [Confluentimicrobium lipolyticum] >gi|1219650352|emb|SMX41709.1| E-cinnamoyl-CoA:R-phenyllactate CoA transferase [Confluentimicrobium lipolyticum]) HSP 1 Score: 264.233 bits (674), Expect = 9.894e-83 Identity = 129/203 (63.55%), Postives = 159/203 (78.33%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRC 203 MGA+++R+ER +LLG++YD+LNRG+ V +DLKSE G TA L+++AD LIEG RPGVMERL LGP+D NP LVY RMTGWGQDGPLA +AGHDINYIALSGAL A G + PV P+NLLGDFGGG +YLA G++ A++EAK+SGKGQVVDAAI+D TAHL +M++ L WQD+RG+NLLDG A Y +YRC Sbjct: 30 MGAEIIRIERPGNKHLLGLEYDILNRGRGFVELDLKSEDGKATARRLIAQADGLIEGMRPGVMERLGLGPDDLQSFNPRLVYGRMTGWGQDGPLAHAAGHDINYIALSGALHAIGPAE-APVPPLNLLGDFGGGGMYLALGLVCAMFEAKTSGKGQVVDAAITDGTAHLMSMIYALRQGGHWQDKRGANLLDGAAPFYGTYRC 231
BLAST of carnitine dehydratase vs. nr
Match: gi|1224610351|ref|WP_092629905.1| (CoA transferase [Actinopolyspora mzabensis] >gi|1086777869|emb|SDK63335.1| alpha-methylacyl-CoA racemase [Actinopolyspora mzabensis]) HSP 1 Score: 263.077 bits (671), Expect = 7.192e-82 Identity = 131/205 (63.90%), Postives = 156/205 (76.10%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 +GADVVR+ER G + D+LNRGKRSV VDLK E+G ET L L RAD+L+EGFRPGV ERL +GPE C+E NP LVY RMTGWGQDGPLA +AGHDI+YIALSG L GD DG P +PVNLLGDFGGGA+YLA G++AA A++ G GQVVDA+I D +AHL+TMLHG++ W +RGSNLLDGGA Y+ Y +D Sbjct: 38 LGADVVRVERPSGGS---GKEDLLNRGKRSVRVDLKHERGPETVLALAERADILLEGFRPGVAERLGVGPEPCFERNPDLVYGRMTGWGQDGPLAETAGHDIDYIALSGVLHTIGDADGPPRVPVNLLGDFGGGAMYLAVGVLAAQLRARAGGGGQVVDASIVDGSAHLATMLHGMLATGGWNTRRGSNLLDGGAPFYDVYATSD 239
BLAST of carnitine dehydratase vs. nr
Match: gi|653156164|ref|WP_027405177.1| (CoA transferase [Aquaspirillum serpens]) HSP 1 Score: 261.922 bits (668), Expect = 9.301e-82 Identity = 126/207 (60.87%), Postives = 159/207 (76.81%), Query Frame = 0 Query: 1 MGADVVRLER--RQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 +GADVVR+ER + L D+LNR +R + +DLKS+ G TALE +++AD LIEGFRPGVMERL LGP C E NP LVY RMTGWGQ G L+ +AGHDINY++LSGAL A G+ GKPV+P+NL+ D GGGA++LAFG++AA+ +AK +G+GQVVDAA++D A L TM+H LM +WQ RGSNLLDGGAH Y++YRCAD Sbjct: 29 LGADVVRIERANQHIGALFDPKLDILNRNRRVITLDLKSQDGLNTALEFITQADALIEGFRPGVMERLGLGPAVCLEKNPKLVYGRMTGWGQHGALSHAAGHDINYLSLSGALHAIGEHGGKPVVPLNLVADCGGGAMFLAFGVLAALLDAKRTGQGQVVDAAMTDGCATLMTMMHTLMAMQQWQPMRGSNLLDGGAHFYDTYRCAD 235
BLAST of carnitine dehydratase vs. nr
Match: gi|1270411657|gb|PHS04863.1| (carnitine dehydratase [Acidithiobacillus sp.]) HSP 1 Score: 260.766 bits (665), Expect = 2.046e-81 Identity = 122/205 (59.51%), Postives = 154/205 (75.12%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 MGADVVR++R+ DY +LNRG+RS+A+DLK ET L L+ +AD L EGFRPGVMERL LGP+ C+ NPA+VY RMTGWGQ GPL+ +AGHDINYIAL+GAL A G+ D PV P+NL+GDFGGGA+YLAFG+M ++E +SSG+GQ+VD A++D AHL M++ L + W D RGSN LDGGAH Y ++ CAD Sbjct: 17 MGADVVRVDRKSPTAGFDKDYQILNRGRRSIALDLKDPDDLETVLRLIEKADALXEGFRPGVMERLGLGPDVCFMRNPAIVYGRMTGWGQAGPLSHAAGHDINYIALTGALHAIGNVDQGPVPPLNLVGDFGGGAMYLAFGLMCGLHEVQSSGQGQIVDVAMTDGAAHLMAMMYSLKHSQMWSDVRGSNFLDGGAHFYGTFECAD 221
BLAST of carnitine dehydratase vs. nr
Match: gi|737738090|ref|WP_035706797.1| (CoA transferase [Haematobacter massiliensis] >gi|672902115|gb|KFI31734.1| CoA-transferase [Haematobacter massiliensis] >gi|1207776208|gb|OWJ72214.1| CoA transferase [Haematobacter massiliensis] >gi|1207792847|gb|OWJ87974.1| CoA transferase [Haematobacter massiliensis]) HSP 1 Score: 260.766 bits (665), Expect = 2.180e-81 Identity = 131/205 (63.90%), Postives = 160/205 (78.05%), Query Frame = 0 Query: 1 MGADVVRLERRQGDNLLGIDYDVLNRGKRSVAVDLKSEQGFETALELLSRADVLIEGFRPGVMERLELGPEDCWEANPALVYARMTGWGQDGPLASSAGHDINYIALSGALSAFGDKDGKPVMPVNLLGDFGGGALYLAFGIMAAVYEAKSSGKGQVVDAAISDCTAHLSTMLHGLMFNNRWQDQRGSNLLDGGAHHYNSYRCAD 205 MGA+V+R+ER ++LLG++YD+LNRG+ + +DLK+ + TA L+SRAD LIEG RPGVMERL LGP D E NP LVY RMTGWGQ GPLAS+AGHDINYI+LSGAL A G ++ P +P+NL+GDFGGGALYLAFG+ AA+ EA SGKGQVVDAAI+D T HL +M++G+ WQD+RG NLLDGGA Y YRCAD Sbjct: 29 MGAEVIRIERPGSESLLGLEYDILNRGRGFIRLDLKTAEDRATARALVSRADALIEGMRPGVMERLGLGPGDFPE-NPRLVYGRMTGWGQTGPLASAAGHDINYISLSGALHAIGPEE-APAVPLNLIGDFGGGALYLAFGMAAALLEAARSGKGQVVDAAITDGTVHLMSMIYGMRAGGCWQDRRGVNLLDGGAPEYGCYRCAD 231 The following BLAST results are available for this feature:
BLAST of carnitine dehydratase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of carnitine dehydratase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of carnitine dehydratase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1_size3401120:176202..177504- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold1_size3401120-processed-gene-1.35 ID=snap_masked-scaffold1_size3401120-processed-gene-1.35|Name=carnitine dehydratase|organism=Tigriopus kingsejongensis|type=gene|length=1303bp|location=Sequence derived from alignment at scaffold1_size3401120:176202..177504- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'carnitine dehydratase' has the following synonyms
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