histone h2a, snap_masked-scaffold2187_size19148-processed-gene-0.4 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of histone h2a vs. L. salmonis genes
Match: EMLSAG00000005641 (supercontig:LSalAtl2s:LSalAtl2s303:362466:370455:1 gene:EMLSAG00000005641 transcript:EMLSAT00000005641 description:"maker-LSalAtl2s303-augustus-gene-3.23") HSP 1 Score: 201.06 bits (510), Expect = 2.634e-61 Identity = 97/108 (89.81%), Postives = 100/108 (92.59%), Query Frame = 0 Query: 16 SRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123 SR +RAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLL+G TIAQGG LPNIQA+L KK K Sbjct: 576 SRXSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLAGXTIAQGGXLPNIQALLFLKKYANK 683
BLAST of histone h2a vs. L. salmonis genes
Match: EMLSAG00000012511 (supercontig:LSalAtl2s:LSalAtl2s921:217466:218531:-1 gene:EMLSAG00000012511 transcript:EMLSAT00000012511 description:"maker-LSalAtl2s921-augustus-gene-1.59") HSP 1 Score: 179.874 bits (455), Expect = 7.020e-60 Identity = 99/105 (94.29%), Postives = 104/105 (99.05%), Query Frame = 0 Query: 17 RSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121 RS+RAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAA +EYLAAE+LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLL+GVTIAQGGVLPNIQAVLLPKK+E Sbjct: 27 RSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAXLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKSE 131
BLAST of histone h2a vs. L. salmonis genes
Match: EMLSAG00000001108 (supercontig:LSalAtl2s:LSalAtl2s1185:74095:74469:1 gene:EMLSAG00000001108 transcript:EMLSAT00000001108 description:"augustus_masked-LSalAtl2s1185-processed-gene-0.1") HSP 1 Score: 175.252 bits (443), Expect = 2.747e-58 Identity = 103/109 (94.50%), Postives = 105/109 (96.33%), Query Frame = 0 Query: 16 SRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124 SRS+RAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAV E LAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLL+GV IAQGGVLPNIQAVLLPKKTEK A Sbjct: 16 SRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVXEXLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLAGVXIAQGGVLPNIQAVLLPKKTEKSA 124
BLAST of histone h2a vs. L. salmonis genes
Match: EMLSAG00000008130 (supercontig:LSalAtl2s:LSalAtl2s484:362061:414899:-1 gene:EMLSAG00000008130 transcript:EMLSAT00000008130 description:"augustus_masked-LSalAtl2s484-processed-gene-3.0") HSP 1 Score: 162.54 bits (410), Expect = 4.737e-53 Identity = 81/120 (67.50%), Postives = 87/120 (72.50%), Query Frame = 0 Query: 5 GKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124 GKGG V G +K S+R GLQ PVGR HR LRKG YAE VGA PVYLAAVM L EVLE GN + DN TRIIPRHL LAIRNDEEL KLL+ +I QG + PNI AVLLPKK EK A Sbjct: 18 GKGGNVGGDSKYCSSRTGLQLPVGRFHRFLRKGYYAESVGANTPVYLAAVMYCLTTEVLESXGNXSCDNTNTRIIPRHLLLAIRNDEELKKLLASXSILQGSIXPNIXAVLLPKKNEKSA 137
BLAST of histone h2a vs. L. salmonis genes
Match: EMLSAG00000007561 (supercontig:LSalAtl2s:LSalAtl2s436:406900:407148:1 gene:EMLSAG00000007561 transcript:EMLSAT00000007561 description:"augustus_masked-LSalAtl2s436-processed-gene-4.1") HSP 1 Score: 149.058 bits (375), Expect = 1.688e-48 Identity = 76/82 (92.68%), Postives = 77/82 (93.90%), Query Frame = 0 Query: 43 VGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124 +GAGAPVYLAAVME LAAEVLELAGNAARDNK TRIIPRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQAVLL KKTEK A Sbjct: 1 MGAGAPVYLAAVMEXLAAEVLELAGNAARDNKXTRIIPRHLQLAIRNDEELNKLLVGVTIAQGGVLPNIQAVLLSKKTEKSA 82
BLAST of histone h2a vs. L. salmonis genes
Match: EMLSAG00000003537 (supercontig:LSalAtl2s:LSalAtl2s193:353311:359396:-1 gene:EMLSAG00000003537 transcript:EMLSAT00000003537 description:"augustus-LSalAtl2s193-processed-gene-3.2") HSP 1 Score: 135.191 bits (339), Expect = 6.640e-42 Identity = 66/90 (73.33%), Postives = 73/90 (81.11%), Query Frame = 0 Query: 35 RKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124 RKGNY E VGAGAP+YL AV+EYLAAEVLEL GNAARD++K RI HLQL I ND ELNKLL+G TIAQGGVLPNIQAV P K +K + Sbjct: 75 RKGNYTECVGAGAPIYLTAVIEYLAAEVLELVGNAARDDRKARIFTLHLQLVICNDGELNKLLAGETIAQGGVLPNIQAVTWPYKMDKSS 164
BLAST of histone h2a vs. L. salmonis genes
Match: EMLSAG00000003259 (supercontig:LSalAtl2s:LSalAtl2s1791:770:1305:-1 gene:EMLSAG00000003259 transcript:EMLSAT00000003259 description:"snap_masked-LSalAtl2s1791-processed-gene-0.2") HSP 1 Score: 127.487 bits (319), Expect = 5.367e-40 Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 0 Query: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLEL 65 MSGRGKGGKVKGKAKSRS+RAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLE Sbjct: 1 MSGRGKGGKVKGKAKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLEF 65
BLAST of histone h2a vs. L. salmonis genes
Match: EMLSAG00000008824 (supercontig:LSalAtl2s:LSalAtl2s54:205060:215917:-1 gene:EMLSAG00000008824 transcript:EMLSAT00000008824 description:"snap_masked-LSalAtl2s54-processed-gene-2.1") HSP 1 Score: 119.013 bits (297), Expect = 2.845e-36 Identity = 61/94 (64.89%), Postives = 71/94 (75.53%), Query Frame = 0 Query: 29 RIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 122 +I RLLRK N ER+GAG +YL AVMEYLAAEVLELAGNAA DN+KTRII HLQL I NDE+L K+L+ TI +G +L NIQ V + K EK Sbjct: 15 KIDRLLRKINSGERIGAGTSIYLVAVMEYLAAEVLELAGNAAHDNRKTRIIYIHLQLVICNDEKLYKMLAT-TITKGVILHNIQTVFIYKNNEK 107
BLAST of histone h2a vs. L. salmonis genes
Match: EMLSAG00000001981 (supercontig:LSalAtl2s:LSalAtl2s1352:73992:74474:1 gene:EMLSAG00000001981 transcript:EMLSAT00000001981 description:"augustus_masked-LSalAtl2s1352-processed-gene-0.2") HSP 1 Score: 115.546 bits (288), Expect = 2.264e-34 Identity = 79/160 (49.38%), Postives = 91/160 (56.88%), Query Frame = 0 Query: 1 MSGRGKGGKVKGKAK----SRSNRAGLQFPVGRIHRLLRKGNYAE-RVGAGAPVYLAAVMEYLAAE--------------------------------VLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123 M+G GK GK GKAK SRS RAGLQFPVGRIHR L+ + RVGA A VY AA++E L AE VLELAGNA++D K RI PRHLQLAIR DEEL+ L+ TIA GGV+P+I L+ KK E K Sbjct: 1 MAG-GKAGKDSGKAKAKAVSRSARAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEXLTAEXIAMIIMIDKYYSLKDIAIIFILFNSSTFIHQVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKA-TIAGGGVIPHIHKSLIGKKGEGK 158
BLAST of histone h2a vs. L. salmonis genes
Match: EMLSAG00000012597 (supercontig:LSalAtl2s:LSalAtl2s944:131989:132225:-1 gene:EMLSAG00000012597 transcript:EMLSAT00000012597 description:"augustus_masked-LSalAtl2s944-processed-gene-0.3") HSP 1 Score: 105.531 bits (262), Expect = 2.009e-31 Identity = 51/77 (66.23%), Postives = 59/77 (76.62%), Query Frame = 0 Query: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTR 77 M G+GKG K KGK++S S+R GLQF V RIHRLLRK + +RVGAGA VYL V EYL AE+LE+ N ARDNKKTR Sbjct: 1 MRGQGKGSKAKGKSRSCSSRDGLQFSVKRIHRLLRKDSTTDRVGAGAFVYLVVVQEYLTAEILEMVENTARDNKKTR 77
BLAST of histone h2a vs. SwissProt
Match: gi|50402136|sp|P84051.2|H2A_DROME (RecName: Full=Histone H2A >gi|50402137|sp|P84052.2|H2A_DROER RecName: Full=Histone H2A >gi|50402138|sp|P84053.2|H2A_DROHY RecName: Full=Histone H2A >gi|50402139|sp|P84054.2|H2A_DROSI RecName: Full=Histone H2A >gi|50402140|sp|P84055.2|H2A_DROYA RecName: Full=Histone H2A >gi|50402141|sp|P84056.2|H2A_RHYAM RecName: Full=Histone H2A >gi|50402142|sp|P84057.2|H2A_TIGCA RecName: Full=Histone H2A) HSP 1 Score: 244.588 bits (623), Expect = 2.539e-84 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0 Query: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA Sbjct: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124
BLAST of histone h2a vs. SwissProt
Match: gi|61213116|sp|Q6PV61.3|H2A_LITVA (RecName: Full=Histone H2A) HSP 1 Score: 239.965 bits (611), Expect = 1.556e-82 Identity = 120/123 (97.56%), Postives = 123/123 (100.00%), Query Frame = 0 Query: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123 MSGRGKGGKVKGK+KSRS+RAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI+PRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK Sbjct: 1 MSGRGKGGKVKGKSKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIVPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123
BLAST of histone h2a vs. SwissProt
Match: gi|122001|sp|P21896.2|H2A_CHITH (RecName: Full=Histone H2A) HSP 1 Score: 236.113 bits (601), Expect = 5.699e-81 Identity = 119/123 (96.75%), Postives = 120/123 (97.56%), Query Frame = 0 Query: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123 MSGRGKGGKVK KAKSRS+RAGLQFPVGRIHRLLRKGNY ERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE K Sbjct: 1 MSGRGKGGKVKAKAKSRSSRAGLQFPVGRIHRLLRKGNYGERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTESK 123
BLAST of histone h2a vs. SwissProt
Match: gi|122044770|sp|P02269.2|H2A_ASTRU (RecName: Full=Histone H2A) HSP 1 Score: 228.794 bits (582), Expect = 4.707e-78 Identity = 114/124 (91.94%), Postives = 118/124 (95.16%), Query Frame = 0 Query: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124 MSGRGKGGK + KAKSRS+RAGLQFPVGR+HR LRKGNYAERVGAGAPVYLAAVMEYLAAE+LELAGNAARDNKKTRI PRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT K A Sbjct: 1 MSGRGKGGKARAKAKSRSSRAGLQFPVGRVHRFLRKGNYAERVGAGAPVYLAAVMEYLAAEILELAGNAARDNKKTRINPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTAKAA 124
BLAST of histone h2a vs. SwissProt
Match: gi|122004|sp|P02264.2|H2A_ONCMY (RecName: Full=Histone H2A) HSP 1 Score: 223.402 bits (568), Expect = 9.127e-76 Identity = 111/123 (90.24%), Postives = 118/123 (95.93%), Query Frame = 0 Query: 1 MSGRGK-GGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 122 MSGRGK GGK + KAK+RS+RAGLQFPVGR+HRLLRKGNYAERVGAGAPVYLAAV+EYL AE+LELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLL GVTIAQGGVLPNIQAVLLPKKTEK Sbjct: 1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTEK 123
BLAST of histone h2a vs. SwissProt
Match: gi|121987|sp|P16886.2|H2AL_STRPU (RecName: Full=Late histone H2A.L3) HSP 1 Score: 222.631 bits (566), Expect = 1.227e-75 Identity = 111/123 (90.24%), Postives = 117/123 (95.12%), Query Frame = 0 Query: 1 MSGRGKG-GKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 122 MSGRGKG GK + KAKSRS RAGLQFPVGR+HR LRKGNYA+RVGAGAPVYLAAV+EYLAAE+LELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT K Sbjct: 1 MSGRGKGAGKARAKAKSRSARAGLQFPVGRVHRFLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTSK 123
BLAST of histone h2a vs. SwissProt
Match: gi|75075512|sp|Q4R3X5.1|H2AJ_MACFA (RecName: Full=Histone H2A.J; Short=H2a/j) HSP 1 Score: 222.631 bits (566), Expect = 1.431e-75 Identity = 112/124 (90.32%), Postives = 118/124 (95.16%), Query Frame = 0 Query: 1 MSGRGK-GGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123 MSGRGK GGKV+ KAKSRS+RAGLQFPVGR+HRLLRKGNYAERVGAGAPVYLAAV+EYL AE+LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLL VTIAQGGVLPNIQAVLLPKKTE + Sbjct: 1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESQ 124
BLAST of histone h2a vs. SwissProt
Match: gi|74733131|sp|Q9BTM1.1|H2AJ_HUMAN (RecName: Full=Histone H2A.J; Short=H2a/j >gi|122143023|sp|Q3ZBX9.1|H2AJ_BOVIN RecName: Full=Histone H2A.J; Short=H2a/j) HSP 1 Score: 222.631 bits (566), Expect = 1.495e-75 Identity = 112/124 (90.32%), Postives = 118/124 (95.16%), Query Frame = 0 Query: 1 MSGRGK-GGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123 MSGRGK GGKV+ KAKSRS+RAGLQFPVGR+HRLLRKGNYAERVGAGAPVYLAAV+EYL AE+LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLL VTIAQGGVLPNIQAVLLPKKTE + Sbjct: 1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESQ 124
BLAST of histone h2a vs. SwissProt
Match: gi|81878911|sp|Q8R1M2.1|H2AJ_MOUSE (RecName: Full=Histone H2A.J; Short=H2a/j >gi|205831582|sp|A9UMV8.1|H2AJ_RAT RecName: Full=Histone H2A.J; Short=H2a/j) HSP 1 Score: 222.246 bits (565), Expect = 2.056e-75 Identity = 112/124 (90.32%), Postives = 118/124 (95.16%), Query Frame = 0 Query: 1 MSGRGK-GGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123 MSGRGK GGKV+ KAKSRS+RAGLQFPVGR+HRLLRKGNYAERVGAGAPVYLAAV+EYL AE+LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLL VTIAQGGVLPNIQAVLLPKKTE + Sbjct: 1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESQ 124
BLAST of histone h2a vs. SwissProt
Match: gi|121966|sp|P06897.2|H2A1_XENLA (RecName: Full=Histone H2A type 1) HSP 1 Score: 221.476 bits (563), Expect = 4.104e-75 Identity = 109/122 (89.34%), Postives = 117/122 (95.90%), Query Frame = 0 Query: 1 MSGRGK-GGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121 MSGRGK GGK + KAK+RS+RAGLQFPVGR+HRLLRKGNYAERVGAGAPVYLAAV+EYL AE+LELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLL GVTIAQGGVLPNIQ+VLLPKKTE Sbjct: 1 MSGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKKTE 122
BLAST of histone h2a vs. nr
Match: gi|1009378247|gb|KYN01474.1| (Histone H2A, partial [Cyphomyrmex costatus]) HSP 1 Score: 243.432 bits (620), Expect = 2.494e-81 Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0 Query: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124 MSGRGKGGK KGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA Sbjct: 4 MSGRGKGGKAKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 127
BLAST of histone h2a vs. nr
Match: gi|195371634|ref|XP_002045932.1| (GM19643 [Drosophila sechellia] >gi|194122486|gb|EDW44529.1| GM19643 [Drosophila sechellia]) HSP 1 Score: 243.432 bits (620), Expect = 2.690e-81 Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0 Query: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK+A Sbjct: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKEA 124
BLAST of histone h2a vs. nr
Match: gi|78707122|ref|NP_001027366.1| (histone H2A [Drosophila melanogaster] >gi|78707132|ref|NP_001027371.1| histone H2A [Drosophila melanogaster] >gi|78707142|ref|NP_001027376.1| histone H2A [Drosophila melanogaster] >gi|72151604|gb|AAZ66562.1| histone H2A [Drosophila melanogaster] >gi|72151609|gb|AAZ66567.1| histone H2A [Drosophila melanogaster] >gi|72151614|gb|AAZ66572.1| histone H2A [Drosophila melanogaster]) HSP 1 Score: 243.432 bits (620), Expect = 2.842e-81 Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0 Query: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124 MSGRGKGGKVKGKAKSRS+RAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA Sbjct: 1 MSGRGKGGKVKGKAKSRSDRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124
BLAST of histone h2a vs. nr
Match: gi|1214569827|gb|ASJ26422.1| (Histone H2A [Pieris rapae]) HSP 1 Score: 243.047 bits (619), Expect = 2.970e-81 Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0 Query: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK Sbjct: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKT 124
BLAST of histone h2a vs. nr
Match: gi|1321329565|ref|XP_023307652.1| (histone H2A [Lucilia cuprina] >gi|1108464811|emb|CRL07048.1| CLUMA_CG019995, isoform A [Clunio marinus] >gi|1108464820|emb|CRL07057.1| CLUMA_CG019989, isoform A [Clunio marinus] >gi|1108464825|emb|CRL07062.1| CLUMA_CG019997, isoform A [Clunio marinus] >gi|1108464830|emb|CRL07067.1| CLUMA_CG019996, isoform A [Clunio marinus] >gi|1108464833|emb|CRL07070.1| CLUMA_CG019990, isoform A [Clunio marinus]) HSP 1 Score: 243.047 bits (619), Expect = 3.278e-81 Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0 Query: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124 MSGRGKGGKVK KAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA Sbjct: 1 MSGRGKGGKVKSKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124
BLAST of histone h2a vs. nr
Match: gi|817085035|ref|XP_012265188.1| (histone H2A [Athalia rosae] >gi|817085316|ref|XP_012265341.1| histone H2A [Athalia rosae] >gi|998508805|ref|XP_015514796.1| PREDICTED: histone H2A [Neodiprion lecontei] >gi|998516231|ref|XP_015518889.1| PREDICTED: histone H2A [Neodiprion lecontei] >gi|998516741|ref|XP_015519170.1| PREDICTED: histone H2A [Neodiprion lecontei] >gi|998517719|ref|XP_015519702.1| PREDICTED: histone H2A [Neodiprion lecontei] >gi|1000738440|ref|XP_015591766.1| PREDICTED: histone H2A-like [Cephus cinctus] >gi|1000738553|ref|XP_015591826.1| PREDICTED: histone H2A-like [Cephus cinctus] >gi|1000744821|ref|XP_015595135.1| PREDICTED: histone H2A-like [Cephus cinctus] >gi|1000758246|ref|XP_015602100.1| PREDICTED: histone H2A-like [Cephus cinctus] >gi|1000765345|ref|XP_015605778.1| PREDICTED: histone H2A-like [Cephus cinctus] >gi|1000765347|ref|XP_015605779.1| PREDICTED: histone H2A-like [Cephus cinctus] >gi|1000765349|ref|XP_015605780.1| PREDICTED: histone H2A-like [Cephus cinctus] >gi|1000770496|ref|XP_015608452.1| PREDICTED: histone H2A-like [Cephus cinctus] >gi|1000770992|ref|XP_015608721.1| PREDICTED: histone H2A-like [Cephus cinctus] >gi|1000772071|ref|XP_015609281.1| PREDICTED: histone H2A-like [Cephus cinctus] >gi|1233164183|ref|XP_022183959.1| histone H2A [Nilaparvata lugens] >gi|1233187034|ref|XP_022195022.1| histone H2A [Nilaparvata lugens] >gi|1233187059|ref|XP_022195030.1| histone H2A [Nilaparvata lugens] >gi|1233187062|ref|XP_022195031.1| histone H2A [Nilaparvata lugens] >gi|1233187066|ref|XP_022195032.1| histone H2A [Nilaparvata lugens] >gi|1233187069|ref|XP_022195033.1| histone H2A [Nilaparvata lugens] >gi|1233187073|ref|XP_022195034.1| histone H2A [Nilaparvata lugens] >gi|1233206691|ref|XP_022202531.1| histone H2A [Nilaparvata lugens] >gi|1233207135|ref|XP_022207334.1| LOW QUALITY PROTEIN: histone H2A-like [Nilaparvata lugens] >gi|1233211551|ref|XP_022205129.1| histone H2A [Nilaparvata lugens] >gi|1233212689|ref|XP_022205741.1| histone H2A [Nilaparvata lugens] >gi|1233213018|ref|XP_022205920.1| histone H2A [Nilaparvata lugens] >gi|1233213457|ref|XP_022206159.1| histone H2A [Nilaparvata lugens] >gi|1233213473|ref|XP_022206168.1| histone H2A [Nilaparvata lugens] >gi|1233214149|ref|XP_022206531.1| histone H2A [Nilaparvata lugens] >gi|1233214465|ref|XP_022206657.1| histone H2A [Nilaparvata lugens] >gi|1279704270|ref|XP_022900851.1| histone H2A [Onthophagus taurus] >gi|1279712624|ref|XP_022900747.1| histone H2A [Onthophagus taurus] >gi|1279718716|ref|XP_022903852.1| histone H2A [Onthophagus taurus] >gi|1279719043|ref|XP_022904023.1| histone H2A [Onthophagus taurus] >gi|1279724273|ref|XP_022906788.1| histone H2A [Onthophagus taurus] >gi|1279726390|ref|XP_022907822.1| histone H2A [Onthophagus taurus]) HSP 1 Score: 243.047 bits (619), Expect = 3.278e-81 Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0 Query: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124 MSGRGKGGKVKGKAKSRS+RAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA Sbjct: 1 MSGRGKGGKVKGKAKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124
BLAST of histone h2a vs. nr
Match: gi|195371155|ref|XP_002045914.1| (GM13182 [Drosophila sechellia] >gi|194122083|gb|EDW44126.1| GM13182 [Drosophila sechellia]) HSP 1 Score: 243.047 bits (619), Expect = 3.278e-81 Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0 Query: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124 MSGRGK GKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA Sbjct: 1 MSGRGKSGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124
BLAST of histone h2a vs. nr
Match: gi|158298157|ref|XP_318363.4| (AGAP003911-PA [Anopheles gambiae str. PEST] >gi|157014388|gb|EAA13648.4| AGAP003911-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 243.047 bits (619), Expect = 3.351e-81 Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0 Query: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKK+EKKA Sbjct: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKSEKKA 124
BLAST of histone h2a vs. nr
Match: gi|1000204474|gb|KXJ75963.1| (hypothetical protein RP20_CCG010646 [Aedes albopictus]) HSP 1 Score: 243.047 bits (619), Expect = 3.579e-81 Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0 Query: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYL AEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA Sbjct: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLVAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124
BLAST of histone h2a vs. nr
Match: gi|328791683|ref|XP_003251613.1| (PREDICTED: histone H2A-like [Apis mellifera] >gi|572304214|ref|XP_006618076.1| PREDICTED: histone H2A-like [Apis dorsata] >gi|1035589687|ref|XP_016921276.1| PREDICTED: histone H2A-like [Apis cerana] >gi|1344801291|ref|XP_023943122.1| histone H2A [Bicyclus anynana] >gi|1241837132|gb|PBC33382.1| Histone H2A [Apis cerana cerana]) HSP 1 Score: 243.047 bits (619), Expect = 3.579e-81 Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0 Query: 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124 MSGRGKGGKVKGK KSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA Sbjct: 1 MSGRGKGGKVKGKVKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124 The following BLAST results are available for this feature:
BLAST of histone h2a vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 15
Pagesback to top
BLAST of histone h2a vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of histone h2a vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2187_size19148:6439..6813- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold2187_size19148-processed-gene-0.4 ID=snap_masked-scaffold2187_size19148-processed-gene-0.4|Name=histone h2a|organism=Tigriopus kingsejongensis|type=gene|length=375bp|location=Sequence derived from alignment at scaffold2187_size19148:6439..6813- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'histone h2a' has the following synonyms
Add to Basket
|