50s ribosomal protein l2, snap_masked-scaffold2261_size17928-processed-gene-0.6 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 50s ribosomal protein l2 vs. L. salmonis genes
Match: EMLSAG00000003571 (supercontig:LSalAtl2s:LSalAtl2s1961:17450:19162:1 gene:EMLSAG00000003571 transcript:EMLSAT00000003571 description:"maker-LSalAtl2s1961-snap-gene-0.17") HSP 1 Score: 69.707 bits (169), Expect = 4.242e-14 Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 0 Query: 106 AEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASR--DEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRT--RWQGKR---PSVRGMCMNPVDHPNGGGE 220 AE N MP+ S+P GT I N+E + G G+IAR +G A + + D +++PSG + + A +G V +++ KAGR +++ KR P VRG+ MNPV+HP+GGG Sbjct: 59 AEVHFRNVMPIGSMPEGTIISNLEEKTGDRGRIARGSGNYATVIAHNPDTKRTRVKLPSGTKKIIPSANRAMVGIVAGGGRIDKPMLKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGN 180
BLAST of 50s ribosomal protein l2 vs. L. salmonis genes
Match: EMLSAG00000003655 (supercontig:LSalAtl2s:LSalAtl2s199:35720:40272:-1 gene:EMLSAG00000003655 transcript:EMLSAT00000003655 description:"maker-LSalAtl2s199-augustus-gene-0.16") HSP 1 Score: 64.3142 bits (155), Expect = 9.564e-12 Identity = 60/202 (29.70%), Postives = 87/202 (43.07%), Query Frame = 0 Query: 18 LEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNE---------VATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKV------GNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQA-ILASRDEGYAFIRMPSGEIR-KFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRP 202 L++ K G GR + IGGG K+K R I R + E + VI + Y+P +IAL Y + +ILA GL+ G +++ + PK+ GN+ P+ ++P GT I +E G G R AG A IL D+ IR + +I + +G V G R RW G RP Sbjct: 167 LDITKLGGRDPETGRKVVEGIGGGXKQKARWIHPHRFPKEEESLSDEDVFLEKVISVCYNPLSDAQIALTAYGKKMR-WILAVEGLSVGXILKS-THIIPKIPIQTSPGNSHPIGALPFGTEICCMEFVSGEGMTFIRDAGNSATILRDYDDKRVVIRNNNKKIEYAVDKWCQCVVGKVSTHPLKKLPIGSPNRMRWMGNRP 366
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|226699327|sp|B2UMT7.1|RL2_AKKM8 (RecName: Full=50S ribosomal protein L2) HSP 1 Score: 378.252 bits (970), Expect = 4.687e-131 Identity = 194/262 (74.05%), Postives = 220/262 (83.97%), Query Frame = 0 Query: 1 MLPAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTRDKHKNSTFIVEDRRKAK 262 + P+FDEIT S PEKSL K+SGGRNN GRIT RHIGGGHK+KYRL+DFKR K + ATV+ IEYDPNRTCRIAL+EY DG KSYILAPTGL G KVE+G+ PKVGNAMPLK+VPLGT++HNIEIRPGSGGK+ARAAGQQAI+++R+ GYA I+MPSGEIR+F+E+ Y TIG VGN HMNE+SGKAGRTRW G RP+VRGM MNPVDHPNGGGEGKSKSGGGRQHLKSPWGH KGQKTR K S ++ RR AK Sbjct: 17 VWPSFDEITTSTPEKSLCRPLKKSGGRNNNGRITTRHIGGGHKRKYRLVDFKRNKFDVPATVLTIEYDPNRTCRIALIEYKDGEKSYILAPTGLQVGMKVESGQKVAPKVGNAMPLKNVPLGTSVHNIEIRPGSGGKVARAAGQQAIVSNREAGYALIKMPSGEIRRFNEDCYCTIGQVGNTQHMNEMSGKAGRTRWMGVRPTVRGMTMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHVKGQKTRRLRKPSDSVIVQRRNAK 278
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|226702906|sp|B3EP58.1|RL2_CHLPB (RecName: Full=50S ribosomal protein L2) HSP 1 Score: 308.145 bits (788), Expect = 2.140e-103 Identity = 157/259 (60.62%), Postives = 192/259 (74.13%), Query Frame = 0 Query: 5 FDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGH-TKGQKTRDKHKNSTFIVEDRRKAK 262 F+E+TKS PEKSLL K+SGGRN GRIT RH GGGHK+ YR+IDFKR K N A V IEYDPNR+ RIALL Y DG K YILAP GL G + +G+ + KVGN+MPLK++PLG +HNIE++ G GG++AR+AG A LA+++ +A +++PSGEIRK E ATIG +GN DH N + GKAGR+RW G RP RGM MNPVDHP GGGEG+SKSGGGR+H KSPWG KG KTR+K K S+ ++ RKAK Sbjct: 21 FEEVTKSTPEKSLLAPLKKSGGRNRAGRITSRHKGGGHKRFYRIIDFKRSKDNIPAKVAAIEYDPNRSSRIALLHYADGEKRYILAPKGLKVGDVLHSGDKVDIKVGNSMPLKNIPLGADVHNIELKQGKGGQMARSAGAFATLAAKEGDHATLKLPSGEIRKVRIECRATIGGIGNDDHENIVLGKAGRSRWLGIRPQTRGMAMNPVDHPMGGGEGRSKSGGGRKHPKSPWGQLAKGLKTRNKKKASSKLIVRGRKAK 279
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|160358745|sp|A1BJ31.2|RL2_CHLPD (RecName: Full=50S ribosomal protein L2) HSP 1 Score: 298.901 bits (764), Expect = 8.730e-100 Identity = 167/261 (63.98%), Postives = 193/261 (73.95%), Query Frame = 0 Query: 3 PAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGH-TKGQKTRDKHKNSTFIVEDRRKAK 262 P FDEITKS+PEKSLL KR+GGRN GRIT RH+GGGHK+ YR+IDFKR K ATV IEYDPNR+ RIALL Y DG K YILAP GL G KVE+GE E K GN MPLK++PLGT IHN+E+R G GG+I R+AG A+LA+R+ Y +++PSGEIRK E ATIG VGN +H N + GKAGR+RW G RP RGM MNPVDHP GGGEGKSKSGGGR+H KSPWG KG KTR+K K S ++ R AK Sbjct: 19 PGFDEITKSEPEKSLLVPVKRTGGRNRAGRITSRHMGGGHKRHYRIIDFKRNKDGVPATVASIEYDPNRSSRIALLHYNDGEKRYILAPKGLKVGEKVESGEKVEIKTGNTMPLKNIPLGTDIHNVEMRAGKGGQIVRSAGAFAVLAAREGDYVTLKLPSGEIRKVRVECRATIGVVGNAEHENIVLGKAGRSRWLGIRPQTRGMAMNPVDHPMGGGEGKSKSGGGRRHPKSPWGQLAKGLKTRNKKKASQKLIVRGRNAK 279
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|226702905|sp|B3QR83.1|RL2_CHLP8 (RecName: Full=50S ribosomal protein L2) HSP 1 Score: 297.36 bits (760), Expect = 3.089e-99 Identity = 164/260 (63.08%), Postives = 198/260 (76.15%), Query Frame = 0 Query: 4 AFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGH-TKGQKTRDKHKNSTFIVEDRRKAK 262 +F+EITKS+PEKSLL K+SGGRN GRIT RH+GGGHK+ YRLIDFKR K N A V IEYDPNR+ RIALL Y DG K YILAP GL G ++E+GE + +VGN MPLK++PLGT +HNIE++ G GG++AR+AG A+LA+R+ +A +++PSGEIRK E ATIG +GN +H N GKAGR+RW G RP RGM MNPVDHP GGGEGKSKSGGGR+H KSPWG KGQKTR+K K ST ++ RKAK Sbjct: 20 SFEEITKSEPEKSLLVPLKKSGGRNTNGRITSRHMGGGHKRFYRLIDFKRNKDNVPAKVAAIEYDPNRSARIALLHYVDGEKRYILAPKGLKVGDRIESGEKVDIRVGNTMPLKNIPLGTDVHNIEMKAGKGGQMARSAGSYAVLAAREGVHATLKLPSGEIRKVRVECRATIGVIGNSEHENISLGKAGRSRWLGIRPQTRGMAMNPVDHPMGGGEGKSKSGGGRKHPKSPWGQLAKGQKTRNKKKASTKLIVRGRKAK 279
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|42559264|sp|Q8KAH5.1|RL2_CHLTE (RecName: Full=50S ribosomal protein L2) HSP 1 Score: 295.049 bits (754), Expect = 2.291e-98 Identity = 163/259 (62.93%), Postives = 195/259 (75.29%), Query Frame = 0 Query: 5 FDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGH-TKGQKTRDKHKNSTFIVEDRRKAK 262 FDEITKS PEKSLL KR+GGRN+ GR+T RH+GGGHK+ YR+IDFKR K N A V IEYDPNR+ RIALL Y DG K YILAP L G ++E+GE + KVGN MPLK++P+G+ +HNIE++ G GG+IAR+AG A+LA+R+ YA ++MPSGEIRK E ATIG +GN +H N GKAGR+RW G RP RGM MNPVDHP GGGEGKSKSGGGR+H KSPWG KG KTR+K K ST ++ RKAK Sbjct: 21 FDEITKSTPEKSLLVPIKRTGGRNSTGRVTSRHMGGGHKRFYRIIDFKRNKDNVPAKVAAIEYDPNRSARIALLHYVDGEKRYILAPKNLKVGDRIESGEKVDIKVGNTMPLKNIPIGSDVHNIELKIGKGGQIARSAGAYAVLAAREGNYATLKMPSGEIRKVRIECRATIGVIGNAEHENISLGKAGRSRWLGIRPQTRGMAMNPVDHPMGGGEGKSKSGGGRKHPKSPWGQLAKGLKTRNKKKASTKLIVRGRKAK 279
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|115305466|sp|Q3APH6.1|RL2_CHLCH (RecName: Full=50S ribosomal protein L2) HSP 1 Score: 295.049 bits (754), Expect = 2.367e-98 Identity = 166/261 (63.60%), Postives = 192/261 (73.56%), Query Frame = 0 Query: 3 PAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGH-TKGQKTRDKHKNSTFIVEDRRKAK 262 P FDEITKSKPEKSLLE +SGGRN+ GR T RH GGGHK+ YR+IDFKR K VATV IEYDPNR+ RIALL Y DG K YILAP GL G KVE+GE E K GN MP+K++PLGT IHNIE++ G GG+I R+AG A+LA+R+ Y +++PSGEIRK E ATIG +GN DH N GKAGR+RW G RP RGM MNPVDHP GGGEGKSKSGGGR+H KSPWG KG KTR++ K S ++ R AK Sbjct: 19 PVFDEITKSKPEKSLLEPLTKSGGRNSAGRKTSRHRGGGHKRHYRIIDFKRNKDGIVATVAAIEYDPNRSARIALLHYIDGEKRYILAPKGLKVGDKVESGEKVEIKTGNTMPMKNIPLGTDIHNIEMKAGKGGQIVRSAGAFAVLAAREGDYVTLKLPSGEIRKVRVECRATIGVIGNADHENIDLGKAGRSRWLGIRPQTRGMAMNPVDHPMGGGEGKSKSGGGRKHPKSPWGQLAKGLKTRNRKKASQKLIVRGRNAK 279
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|226702979|sp|B4S5M4.1|RL2_PROA2 (RecName: Full=50S ribosomal protein L2) HSP 1 Score: 294.278 bits (752), Expect = 4.911e-98 Identity = 165/261 (63.22%), Postives = 195/261 (74.71%), Query Frame = 0 Query: 3 PAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGH-TKGQKTRDKHKNSTFIVEDRRKAK 262 P FDEITKS+PEKSLL K+SGGRN GRIT RH GGGHK+ YR+IDFKR K N ATV IEYDPNR+ RIALL Y DG K YILAP GL G ++ +G+ E K GN MPLK++PLGT IHNIE++ G GG+I R+AG A+LA+++ YA +++PSGEIRK E ATIG VGN DH N + GKAGR+RW G RP RGM MNPVDHP GGGEGKSKSGGGR+H KSPWG KG KTR+K K S+ ++ RK+K Sbjct: 19 PEFDEITKSEPEKSLLAPLKKSGGRNKAGRITSRHRGGGHKRFYRIIDFKRNKDNIPATVAAIEYDPNRSARIALLHYVDGEKRYILAPKGLKVGEQLLSGDKVEVKPGNTMPLKNIPLGTDIHNIEMKAGKGGQIVRSAGAYAVLAAKEGDYATLKLPSGEIRKVRIECRATIGGVGNADHENIVLGKAGRSRWLGVRPQTRGMAMNPVDHPMGGGEGKSKSGGGRKHPKSPWGQLAKGLKTRNKKKASSKLIVRGRKSK 279
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|254764707|sp|B8D0C7.1|RL2_HALOH (RecName: Full=50S ribosomal protein L2) HSP 1 Score: 291.197 bits (744), Expect = 7.879e-97 Identity = 149/263 (56.65%), Postives = 191/263 (72.62%), Query Frame = 0 Query: 2 LPAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWG-HTKGQKTRDKHKNSTFIVEDRRKAKR 263 + AFDEIT+ +PEKSLL K++GGRN+ GR+T+RH GGGHK++YR+IDFKR K A V IEYDPNR+ RIALL Y DG K YILAP L G V++GE+AE K GNA+ LK++P+GT IHNIE++PG GG++ARAAG A + +++ YA I++PSGE+R E ATIG VGN DH N GKAGR RW GKRP VRG+ MNPVDHP+GGGEG++ +G +H +PWG T G+KTR + + +I+ RR KR Sbjct: 18 VSAFDEITRREPEKSLLAPLKKTGGRNSYGRVTVRHRGGGHKRRYRIIDFKRDKDGVPARVASIEYDPNRSARIALLHYVDGEKRYILAPNKLQVGDTVKSGEDAEIKPGNALKLKNIPVGTIIHNIELKPGKGGQLARAAGTMAQILAKEGKYAHIKLPSGEVRLISLECKATIGQVGNIDHENISIGKAGRKRWLGKRPHVRGVAMNPVDHPHGGGEGRTSTG---RHPVTPWGKRTLGKKTRKRKASDKYIIRSRRARKR 277
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|189042586|sp|A9BHA2.1|RL2_PETMO (RecName: Full=50S ribosomal protein L2) HSP 1 Score: 291.197 bits (744), Expect = 8.124e-97 Identity = 153/259 (59.07%), Postives = 186/259 (71.81%), Query Frame = 0 Query: 5 FDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHL-KSPWGH-TKGQKTRDKHKNST-FIVEDRRK 260 F E++K +PEKSLLE K++GGRN+ GR+TMRH GGGHK+KYR+IDFKR K N A V IEYDPNR+ RIALL Y DG K YIL+P GL G V +G AE KVGN++PL+++PLGT +HNIE PG GGKIA++AG A L +++ YA ++MPSGE+R+ ATIG VGN +H NE+ GKAG+TRW G+RP VRGM NPVDHP GGGEG+SK H+ KSPWG KG KTR K S FIV R K Sbjct: 21 FSELSKVEPEKSLLEPLKKTGGRNHYGRVTMRHRGGGHKRKYRIIDFKRDKINIPAKVASIEYDPNRSARIALLVYADGEKRYILSPKGLHVGETVMSGAKAEIKVGNSLPLENIPLGTLVHNIEFEPGRGGKIAKSAGTYAQLMAKEGKYALLKMPSGELRRVRLSCMATIGVVGNEEHSNEVYGKAGKTRWLGRRPKVRGMVQNPVDHPMGGGEGRSKG-----HIPKSPWGTPAKGYKTRRGKKQSDKFIVRRRVK 274
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|226702908|sp|B3QY27.1|RL2_CHLT3 (RecName: Full=50S ribosomal protein L2) HSP 1 Score: 289.656 bits (740), Expect = 4.175e-96 Identity = 156/262 (59.54%), Postives = 194/262 (74.05%), Query Frame = 0 Query: 3 PAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGH-TKGQKTRDKHKNSTFIVEDRRKAKR 263 P+F+EIT KPEKSLL K +GGRNN GR+T RH+GGGHK+ YR+IDFKR K A V IEYDPNRT RIALL Y DG K YILAP G+ G +E G A+ KVGNA+PLK++P+G +HNIE+RPG GG++AR+AG A+L +++ YA ++MPSGE+RK E AT+G +GN +H N GKAGR+RW G RP RGM MNPVDHP GGGEGKSKSGGGR+H KSPWG +KG KTR + K S+ ++ RR +K+ Sbjct: 19 PSFEEITTDKPEKSLLVPNKSTGGRNNNGRVTSRHMGGGHKRYYRIIDFKRNKDGIPAKVATIEYDPNRTARIALLSYADGEKRYILAPNGIKVGDLIECGPEADIKVGNALPLKNIPVGIEVHNIEMRPGKGGQMARSAGSYAVLVAKEGDYATLKMPSGELRKVRVECKATVGVIGNLEHENLSLGKAGRSRWLGIRPQTRGMAMNPVDHPMGGGEGKSKSGGGRKHPKSPWGQKSKGLKTRKRKKASSKLIVRRRDSKK 280
BLAST of 50s ribosomal protein l2 vs. nr
Match: gi|1110139427|emb|SHK36561.1| (LSU ribosomal protein L2P [Rubritalea squalenifaciens DSM 18772]) HSP 1 Score: 361.688 bits (927), Expect = 4.340e-122 Identity = 194/261 (74.33%), Postives = 219/261 (83.91%), Query Frame = 0 Query: 4 AFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTRDKHKNSTFIVEDRRKAKRR 264 F+EITKS PEKSL K++GGRNN+GRIT RHIGGGHK+KYRLIDFKR K + ATV+ IEYDPNRTCRIAL+EY DG KSYILAP GLT G+ V AGE PK GNA PLK+VPLGTA+HNIE+ PG+GGK+AR+AGQQAI+++R+ GYA ++MPSGEIRKF+E TIG VGNRDHMNE+SGKAGRTRWQG RP+VRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTR K K S + RRK K R Sbjct: 20 TFEEITKSTPEKSLTAPLKKTGGRNNRGRITCRHIGGGHKRKYRLIDFKRRKFDVEATVVAIEYDPNRTCRIALIEYADGQKSYILAPVGLTVGNTVVAGEKVAPKPGNATPLKNVPLGTAVHNIELVPGAGGKVARSAGQQAIVSNRETGYALVKMPSGEIRKFNENCLCTIGQVGNRDHMNEVSGKAGRTRWQGVRPTVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTRKKKKASDKFIVQRRKTKNR 280
BLAST of 50s ribosomal protein l2 vs. nr
Match: gi|494035688|ref|WP_006977816.1| (50S ribosomal protein L2 [Chthoniobacter flavus] >gi|196227861|gb|EDY22364.1| ribosomal protein L2 [Chthoniobacter flavus Ellin428]) HSP 1 Score: 349.747 bits (896), Expect = 3.496e-117 Identity = 181/267 (67.79%), Postives = 214/267 (80.15%), Query Frame = 0 Query: 2 LPAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGH-TKGQKTRDKHKNSTFIVEDRRKAKRRPYV 267 LPAFDEITK+KPEKSL+ +K+RSGGRNN GRIT RHIGGGHK+KYR+IDFKR KRN A V IEYDPNRTCRIALL+YPDG K+YILAP GL G KV AGE EPK+GNA+PL ++PLGTAIHN+E+ G GG+IAR+AGQ +L +R+ YA +++PSGEIRK H + YATIG VGN +HMN SGKAGR+RW+G RP+VRGM MNPVDHP GGG+GKSK GGGR H SPWG KG KTR KHK S + +RRK+K++ V Sbjct: 18 LPAFDEITKTKPEKSLVVIKRRSGGRNNNGRITCRHIGGGHKQKYRIIDFKRKKRNVEAEVKAIEYDPNRTCRIALLQYPDGEKAYILAPVGLNVGDKVSAGEAVEPKIGNALPLSAIPLGTAIHNVELVAGRGGQIARSAGQLVMLNNREGDYALVKLPSGEIRKIHIKCYATIGQVGNTEHMNVSSGKAGRSRWRGVRPTVRGMVMNPVDHPMGGGQGKSKGGGGRHHPMSPWGQLAKGFKTRRKHKPSNSFIIERRKSKKKSQV 284
BLAST of 50s ribosomal protein l2 vs. nr
Match: gi|820846517|ref|XP_012341205.1| (PREDICTED: 50S ribosomal protein L2, chloroplastic-like [Apis florea]) HSP 1 Score: 343.199 bits (879), Expect = 4.737e-114 Identity = 180/336 (53.57%), Postives = 220/336 (65.48%), Query Frame = 0 Query: 5 FDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWG-HTKGQKTRDKHKNSTFIVEDRRKAKRRPYVDQKLLAKIDAAAEGGNKKPIKTWSRRSMITPDFVGHNFAVHNGKTFVPVFVSENMVGHKLGEFSPTRIFKAH 339 F EITKSKPE++LLE + + GRN+ G IT RH GGGHK+KYR+IDFKR K N A V IEYDPNRT IALL Y DG K+YILAP GL G VE+G NA+ K GNA+PLK++P GT+IHNIE+RPG GG++ R+AG A + D Y +R+ SGE+RK ATIG VGN H GKAGR+RW G+RP RG MNP DHP+GGGEGK+ GR +PWG +G KTR+ + LL K+DA A+ K+ IKTWSRRS I P FVG AV++G+ VPV+++E+MVGHKLGEF PTR F H Sbjct: 6 FAEITKSKPERTLLESQSHTAGRNSYGHITSRHRGGGHKQKYRIIDFKRNKDNAKAVVKAIEYDPNRTANIALLHYTDGIKAYILAPKGLKVGDVVESGPNADIKPGNALPLKNIPTGTSIHNIELRPGKGGQLVRSAGANAQVLGSDGKYTLVRLQSGEVRKILSTCRATIGVVGNEQHSLIQLGKAGRSRWLGRRPQSRGSVMNPNDHPHGGGEGKAPV--GRPQPMTPWGKKARGIKTRN---------------------NASLLKKVDAQADTEKKQVIKTWSRRSTIFPSFVGLTIAVYDGRKHVPVYITEDMVGHKLGEFVPTRTFHGH 318
BLAST of 50s ribosomal protein l2 vs. nr
Match: gi|524406453|emb|CDB55411.1| (50S ribosomal protein L2 [Akkermansia muciniphila CAG:154]) HSP 1 Score: 339.347 bits (869), Expect = 1.024e-113 Identity = 174/232 (75.00%), Postives = 197/232 (84.91%), Query Frame = 0 Query: 31 GRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTRDKHKNSTFIVEDRRKAK 262 G IT RHIGGGHK+KYRL+DFKR K + ATV+ IEYDPNRTCRIAL+EY DG KSYILAPTGL G KVE+G+ PKVGNAMPLK+VPLGT++HNIEIRPGSGGK+ARAAGQQAI+++R+ GYA I+MPSGEIR+F+E+ Y TIG VGN HMNE+SGKAGRTRW G RP+VRGM MNPVDHPNGGGEGKSKSGGGRQHLKSPWGH KGQKTR K S ++ RR AK Sbjct: 11 GXITTRHIGGGHKRKYRLVDFKRNKFDVPATVLTIEYDPNRTCRIALIEYKDGEKSYILAPTGLQVGMKVESGQKVAPKVGNAMPLKNVPLGTSVHNIEIRPGSGGKVARAAGQQAIVSNREAGYALIKMPSGEIRRFNEDCYCTIGQVGNTQHMNEMSGKAGRTRWMGVRPTVRGMTMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHVKGQKTRRLRKPSDSVIVQRRNAK 242
BLAST of 50s ribosomal protein l2 vs. nr
Match: gi|1028412125|gb|OAI42630.1| (50S ribosomal protein L2 [Verrucomicrobia bacterium SCGC AG-212-E04]) HSP 1 Score: 340.117 bits (871), Expect = 2.082e-113 Identity = 179/265 (67.55%), Postives = 211/265 (79.62%), Query Frame = 0 Query: 1 MLPAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGH-TKGQKTRDKHKNST-FIVEDRRKAKR 263 M PAFDEITKSKPE+SL E ++SGGRNN GR+T+RH GGGHK++YRL+DFKR K ATV+ +EYDPNRT RIAL++Y DG KSYIL P GL G KV +G +A P++GNA+PL +PLGT IHNIE RPG GG+IAR+AGQ A+L +R+ GYA ++MPSGEIRK HE YATIG VGN DHMN ISGKAGR+RWQG+RP+VRGM MNP+DHP GGG+GKSK GGGR H SPWG +KG KTR KHK S FIVE R K K+ Sbjct: 17 MTPAFDEITKSKPERSLTEPLRKSGGRNNTGRLTVRHRGGGHKRRYRLVDFKRQKFGMEATVLAVEYDPNRTARIALIQYTDGEKSYILWPVGLAVGAKVMSGPDAAPEIGNALPLSVIPLGTNIHNIEFRPGHGGQIARSAGQIAVLNNREGGYALVKMPSGEIRKIHENCYATIGQVGNVDHMNVISGKAGRSRWQGRRPTVRGMVMNPIDHPMGGGQGKSKGGGGRHHPVSPWGQLSKGFKTRRKHKPSDKFIVERRTKKKK 281 The following BLAST results are available for this feature:
BLAST of 50s ribosomal protein l2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of 50s ribosomal protein l2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of 50s ribosomal protein l2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2261_size17928:13789..14897+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold2261_size17928-processed-gene-0.6 ID=snap_masked-scaffold2261_size17928-processed-gene-0.6|Name=50s ribosomal protein l2|organism=Tigriopus kingsejongensis|type=gene|length=1109bp|location=Sequence derived from alignment at scaffold2261_size17928:13789..14897+ (Tigriopus kingsejongensis)back to top Synonyms
The feature '50s ribosomal protein l2' has the following synonyms
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