50s ribosomal protein l2, snap_masked-scaffold2261_size17928-processed-gene-0.6 (gene) Tigriopus kingsejongensis

Overview
Name50s ribosomal protein l2
Unique Namesnap_masked-scaffold2261_size17928-processed-gene-0.6
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of 50s ribosomal protein l2 vs. L. salmonis genes
Match: EMLSAG00000003571 (supercontig:LSalAtl2s:LSalAtl2s1961:17450:19162:1 gene:EMLSAG00000003571 transcript:EMLSAT00000003571 description:"maker-LSalAtl2s1961-snap-gene-0.17")

HSP 1 Score: 69.707 bits (169), Expect = 4.242e-14
Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 0
Query:  106 AEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASR--DEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRT--RWQGKR---PSVRGMCMNPVDHPNGGGE 220
            AE    N MP+ S+P GT I N+E + G  G+IAR +G  A + +   D     +++PSG  +     + A +G V     +++   KAGR   +++ KR   P VRG+ MNPV+HP+GGG 
Sbjct:   59 AEVHFRNVMPIGSMPEGTIISNLEEKTGDRGRIARGSGNYATVIAHNPDTKRTRVKLPSGTKKIIPSANRAMVGIVAGGGRIDKPMLKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGN 180          
BLAST of 50s ribosomal protein l2 vs. L. salmonis genes
Match: EMLSAG00000003655 (supercontig:LSalAtl2s:LSalAtl2s199:35720:40272:-1 gene:EMLSAG00000003655 transcript:EMLSAT00000003655 description:"maker-LSalAtl2s199-augustus-gene-0.16")

HSP 1 Score: 64.3142 bits (155), Expect = 9.564e-12
Identity = 60/202 (29.70%), Postives = 87/202 (43.07%), Query Frame = 0
Query:   18 LEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNE---------VATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKV------GNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQA-ILASRDEGYAFIRMPSGEIR-KFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRP 202
            L++ K  G     GR  +  IGGG K+K R I   R  + E         +  VI + Y+P    +IAL  Y    + +ILA  GL+ G  +++  +  PK+      GN+ P+ ++P GT I  +E   G G    R AG  A IL   D+    IR  + +I     +     +G V          G   R RW G RP
Sbjct:  167 LDITKLGGRDPETGRKVVEGIGGGXKQKARWIHPHRFPKEEESLSDEDVFLEKVISVCYNPLSDAQIALTAYGKKMR-WILAVEGLSVGXILKS-THIIPKIPIQTSPGNSHPIGALPFGTEICCMEFVSGEGMTFIRDAGNSATILRDYDDKRVVIRNNNKKIEYAVDKWCQCVVGKVSTHPLKKLPIGSPNRMRWMGNRP 366          
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|226699327|sp|B2UMT7.1|RL2_AKKM8 (RecName: Full=50S ribosomal protein L2)

HSP 1 Score: 378.252 bits (970), Expect = 4.687e-131
Identity = 194/262 (74.05%), Postives = 220/262 (83.97%), Query Frame = 0
Query:    1 MLPAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTRDKHKNSTFIVEDRRKAK 262
            + P+FDEIT S PEKSL    K+SGGRNN GRIT RHIGGGHK+KYRL+DFKR K +  ATV+ IEYDPNRTCRIAL+EY DG KSYILAPTGL  G KVE+G+   PKVGNAMPLK+VPLGT++HNIEIRPGSGGK+ARAAGQQAI+++R+ GYA I+MPSGEIR+F+E+ Y TIG VGN  HMNE+SGKAGRTRW G RP+VRGM MNPVDHPNGGGEGKSKSGGGRQHLKSPWGH KGQKTR   K S  ++  RR AK
Sbjct:   17 VWPSFDEITTSTPEKSLCRPLKKSGGRNNNGRITTRHIGGGHKRKYRLVDFKRNKFDVPATVLTIEYDPNRTCRIALIEYKDGEKSYILAPTGLQVGMKVESGQKVAPKVGNAMPLKNVPLGTSVHNIEIRPGSGGKVARAAGQQAIVSNREAGYALIKMPSGEIRRFNEDCYCTIGQVGNTQHMNEMSGKAGRTRWMGVRPTVRGMTMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHVKGQKTRRLRKPSDSVIVQRRNAK 278          
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|226702906|sp|B3EP58.1|RL2_CHLPB (RecName: Full=50S ribosomal protein L2)

HSP 1 Score: 308.145 bits (788), Expect = 2.140e-103
Identity = 157/259 (60.62%), Postives = 192/259 (74.13%), Query Frame = 0
Query:    5 FDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGH-TKGQKTRDKHKNSTFIVEDRRKAK 262
            F+E+TKS PEKSLL   K+SGGRN  GRIT RH GGGHK+ YR+IDFKR K N  A V  IEYDPNR+ RIALL Y DG K YILAP GL  G  + +G+  + KVGN+MPLK++PLG  +HNIE++ G GG++AR+AG  A LA+++  +A +++PSGEIRK   E  ATIG +GN DH N + GKAGR+RW G RP  RGM MNPVDHP GGGEG+SKSGGGR+H KSPWG   KG KTR+K K S+ ++   RKAK
Sbjct:   21 FEEVTKSTPEKSLLAPLKKSGGRNRAGRITSRHKGGGHKRFYRIIDFKRSKDNIPAKVAAIEYDPNRSSRIALLHYADGEKRYILAPKGLKVGDVLHSGDKVDIKVGNSMPLKNIPLGADVHNIELKQGKGGQMARSAGAFATLAAKEGDHATLKLPSGEIRKVRIECRATIGGIGNDDHENIVLGKAGRSRWLGIRPQTRGMAMNPVDHPMGGGEGRSKSGGGRKHPKSPWGQLAKGLKTRNKKKASSKLIVRGRKAK 279          
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|160358745|sp|A1BJ31.2|RL2_CHLPD (RecName: Full=50S ribosomal protein L2)

HSP 1 Score: 298.901 bits (764), Expect = 8.730e-100
Identity = 167/261 (63.98%), Postives = 193/261 (73.95%), Query Frame = 0
Query:    3 PAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGH-TKGQKTRDKHKNSTFIVEDRRKAK 262
            P FDEITKS+PEKSLL   KR+GGRN  GRIT RH+GGGHK+ YR+IDFKR K    ATV  IEYDPNR+ RIALL Y DG K YILAP GL  G KVE+GE  E K GN MPLK++PLGT IHN+E+R G GG+I R+AG  A+LA+R+  Y  +++PSGEIRK   E  ATIG VGN +H N + GKAGR+RW G RP  RGM MNPVDHP GGGEGKSKSGGGR+H KSPWG   KG KTR+K K S  ++   R AK
Sbjct:   19 PGFDEITKSEPEKSLLVPVKRTGGRNRAGRITSRHMGGGHKRHYRIIDFKRNKDGVPATVASIEYDPNRSSRIALLHYNDGEKRYILAPKGLKVGEKVESGEKVEIKTGNTMPLKNIPLGTDIHNVEMRAGKGGQIVRSAGAFAVLAAREGDYVTLKLPSGEIRKVRVECRATIGVVGNAEHENIVLGKAGRSRWLGIRPQTRGMAMNPVDHPMGGGEGKSKSGGGRRHPKSPWGQLAKGLKTRNKKKASQKLIVRGRNAK 279          
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|226702905|sp|B3QR83.1|RL2_CHLP8 (RecName: Full=50S ribosomal protein L2)

HSP 1 Score: 297.36 bits (760), Expect = 3.089e-99
Identity = 164/260 (63.08%), Postives = 198/260 (76.15%), Query Frame = 0
Query:    4 AFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGH-TKGQKTRDKHKNSTFIVEDRRKAK 262
            +F+EITKS+PEKSLL   K+SGGRN  GRIT RH+GGGHK+ YRLIDFKR K N  A V  IEYDPNR+ RIALL Y DG K YILAP GL  G ++E+GE  + +VGN MPLK++PLGT +HNIE++ G GG++AR+AG  A+LA+R+  +A +++PSGEIRK   E  ATIG +GN +H N   GKAGR+RW G RP  RGM MNPVDHP GGGEGKSKSGGGR+H KSPWG   KGQKTR+K K ST ++   RKAK
Sbjct:   20 SFEEITKSEPEKSLLVPLKKSGGRNTNGRITSRHMGGGHKRFYRLIDFKRNKDNVPAKVAAIEYDPNRSARIALLHYVDGEKRYILAPKGLKVGDRIESGEKVDIRVGNTMPLKNIPLGTDVHNIEMKAGKGGQMARSAGSYAVLAAREGVHATLKLPSGEIRKVRVECRATIGVIGNSEHENISLGKAGRSRWLGIRPQTRGMAMNPVDHPMGGGEGKSKSGGGRKHPKSPWGQLAKGQKTRNKKKASTKLIVRGRKAK 279          
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|42559264|sp|Q8KAH5.1|RL2_CHLTE (RecName: Full=50S ribosomal protein L2)

HSP 1 Score: 295.049 bits (754), Expect = 2.291e-98
Identity = 163/259 (62.93%), Postives = 195/259 (75.29%), Query Frame = 0
Query:    5 FDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGH-TKGQKTRDKHKNSTFIVEDRRKAK 262
            FDEITKS PEKSLL   KR+GGRN+ GR+T RH+GGGHK+ YR+IDFKR K N  A V  IEYDPNR+ RIALL Y DG K YILAP  L  G ++E+GE  + KVGN MPLK++P+G+ +HNIE++ G GG+IAR+AG  A+LA+R+  YA ++MPSGEIRK   E  ATIG +GN +H N   GKAGR+RW G RP  RGM MNPVDHP GGGEGKSKSGGGR+H KSPWG   KG KTR+K K ST ++   RKAK
Sbjct:   21 FDEITKSTPEKSLLVPIKRTGGRNSTGRVTSRHMGGGHKRFYRIIDFKRNKDNVPAKVAAIEYDPNRSARIALLHYVDGEKRYILAPKNLKVGDRIESGEKVDIKVGNTMPLKNIPIGSDVHNIELKIGKGGQIARSAGAYAVLAAREGNYATLKMPSGEIRKVRIECRATIGVIGNAEHENISLGKAGRSRWLGIRPQTRGMAMNPVDHPMGGGEGKSKSGGGRKHPKSPWGQLAKGLKTRNKKKASTKLIVRGRKAK 279          
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|115305466|sp|Q3APH6.1|RL2_CHLCH (RecName: Full=50S ribosomal protein L2)

HSP 1 Score: 295.049 bits (754), Expect = 2.367e-98
Identity = 166/261 (63.60%), Postives = 192/261 (73.56%), Query Frame = 0
Query:    3 PAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGH-TKGQKTRDKHKNSTFIVEDRRKAK 262
            P FDEITKSKPEKSLLE   +SGGRN+ GR T RH GGGHK+ YR+IDFKR K   VATV  IEYDPNR+ RIALL Y DG K YILAP GL  G KVE+GE  E K GN MP+K++PLGT IHNIE++ G GG+I R+AG  A+LA+R+  Y  +++PSGEIRK   E  ATIG +GN DH N   GKAGR+RW G RP  RGM MNPVDHP GGGEGKSKSGGGR+H KSPWG   KG KTR++ K S  ++   R AK
Sbjct:   19 PVFDEITKSKPEKSLLEPLTKSGGRNSAGRKTSRHRGGGHKRHYRIIDFKRNKDGIVATVAAIEYDPNRSARIALLHYIDGEKRYILAPKGLKVGDKVESGEKVEIKTGNTMPMKNIPLGTDIHNIEMKAGKGGQIVRSAGAFAVLAAREGDYVTLKLPSGEIRKVRVECRATIGVIGNADHENIDLGKAGRSRWLGIRPQTRGMAMNPVDHPMGGGEGKSKSGGGRKHPKSPWGQLAKGLKTRNRKKASQKLIVRGRNAK 279          
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|226702979|sp|B4S5M4.1|RL2_PROA2 (RecName: Full=50S ribosomal protein L2)

HSP 1 Score: 294.278 bits (752), Expect = 4.911e-98
Identity = 165/261 (63.22%), Postives = 195/261 (74.71%), Query Frame = 0
Query:    3 PAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGH-TKGQKTRDKHKNSTFIVEDRRKAK 262
            P FDEITKS+PEKSLL   K+SGGRN  GRIT RH GGGHK+ YR+IDFKR K N  ATV  IEYDPNR+ RIALL Y DG K YILAP GL  G ++ +G+  E K GN MPLK++PLGT IHNIE++ G GG+I R+AG  A+LA+++  YA +++PSGEIRK   E  ATIG VGN DH N + GKAGR+RW G RP  RGM MNPVDHP GGGEGKSKSGGGR+H KSPWG   KG KTR+K K S+ ++   RK+K
Sbjct:   19 PEFDEITKSEPEKSLLAPLKKSGGRNKAGRITSRHRGGGHKRFYRIIDFKRNKDNIPATVAAIEYDPNRSARIALLHYVDGEKRYILAPKGLKVGEQLLSGDKVEVKPGNTMPLKNIPLGTDIHNIEMKAGKGGQIVRSAGAYAVLAAKEGDYATLKLPSGEIRKVRIECRATIGGVGNADHENIVLGKAGRSRWLGVRPQTRGMAMNPVDHPMGGGEGKSKSGGGRKHPKSPWGQLAKGLKTRNKKKASSKLIVRGRKSK 279          
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|254764707|sp|B8D0C7.1|RL2_HALOH (RecName: Full=50S ribosomal protein L2)

HSP 1 Score: 291.197 bits (744), Expect = 7.879e-97
Identity = 149/263 (56.65%), Postives = 191/263 (72.62%), Query Frame = 0
Query:    2 LPAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWG-HTKGQKTRDKHKNSTFIVEDRRKAKR 263
            + AFDEIT+ +PEKSLL   K++GGRN+ GR+T+RH GGGHK++YR+IDFKR K    A V  IEYDPNR+ RIALL Y DG K YILAP  L  G  V++GE+AE K GNA+ LK++P+GT IHNIE++PG GG++ARAAG  A + +++  YA I++PSGE+R    E  ATIG VGN DH N   GKAGR RW GKRP VRG+ MNPVDHP+GGGEG++ +G   +H  +PWG  T G+KTR +  +  +I+  RR  KR
Sbjct:   18 VSAFDEITRREPEKSLLAPLKKTGGRNSYGRVTVRHRGGGHKRRYRIIDFKRDKDGVPARVASIEYDPNRSARIALLHYVDGEKRYILAPNKLQVGDTVKSGEDAEIKPGNALKLKNIPVGTIIHNIELKPGKGGQLARAAGTMAQILAKEGKYAHIKLPSGEVRLISLECKATIGQVGNIDHENISIGKAGRKRWLGKRPHVRGVAMNPVDHPHGGGEGRTSTG---RHPVTPWGKRTLGKKTRKRKASDKYIIRSRRARKR 277          
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|189042586|sp|A9BHA2.1|RL2_PETMO (RecName: Full=50S ribosomal protein L2)

HSP 1 Score: 291.197 bits (744), Expect = 8.124e-97
Identity = 153/259 (59.07%), Postives = 186/259 (71.81%), Query Frame = 0
Query:    5 FDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHL-KSPWGH-TKGQKTRDKHKNST-FIVEDRRK 260
            F E++K +PEKSLLE  K++GGRN+ GR+TMRH GGGHK+KYR+IDFKR K N  A V  IEYDPNR+ RIALL Y DG K YIL+P GL  G  V +G  AE KVGN++PL+++PLGT +HNIE  PG GGKIA++AG  A L +++  YA ++MPSGE+R+      ATIG VGN +H NE+ GKAG+TRW G+RP VRGM  NPVDHP GGGEG+SK      H+ KSPWG   KG KTR   K S  FIV  R K
Sbjct:   21 FSELSKVEPEKSLLEPLKKTGGRNHYGRVTMRHRGGGHKRKYRIIDFKRDKINIPAKVASIEYDPNRSARIALLVYADGEKRYILSPKGLHVGETVMSGAKAEIKVGNSLPLENIPLGTLVHNIEFEPGRGGKIAKSAGTYAQLMAKEGKYALLKMPSGELRRVRLSCMATIGVVGNEEHSNEVYGKAGKTRWLGRRPKVRGMVQNPVDHPMGGGEGRSKG-----HIPKSPWGTPAKGYKTRRGKKQSDKFIVRRRVK 274          
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|226702908|sp|B3QY27.1|RL2_CHLT3 (RecName: Full=50S ribosomal protein L2)

HSP 1 Score: 289.656 bits (740), Expect = 4.175e-96
Identity = 156/262 (59.54%), Postives = 194/262 (74.05%), Query Frame = 0
Query:    3 PAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGH-TKGQKTRDKHKNSTFIVEDRRKAKR 263
            P+F+EIT  KPEKSLL   K +GGRNN GR+T RH+GGGHK+ YR+IDFKR K    A V  IEYDPNRT RIALL Y DG K YILAP G+  G  +E G  A+ KVGNA+PLK++P+G  +HNIE+RPG GG++AR+AG  A+L +++  YA ++MPSGE+RK   E  AT+G +GN +H N   GKAGR+RW G RP  RGM MNPVDHP GGGEGKSKSGGGR+H KSPWG  +KG KTR + K S+ ++  RR +K+
Sbjct:   19 PSFEEITTDKPEKSLLVPNKSTGGRNNNGRVTSRHMGGGHKRYYRIIDFKRNKDGIPAKVATIEYDPNRTARIALLSYADGEKRYILAPNGIKVGDLIECGPEADIKVGNALPLKNIPVGIEVHNIEMRPGKGGQMARSAGSYAVLVAKEGDYATLKMPSGELRKVRVECKATVGVIGNLEHENLSLGKAGRSRWLGIRPQTRGMAMNPVDHPMGGGEGKSKSGGGRKHPKSPWGQKSKGLKTRKRKKASSKLIVRRRDSKK 280          
BLAST of 50s ribosomal protein l2 vs. nr
Match: gi|1110139427|emb|SHK36561.1| (LSU ribosomal protein L2P [Rubritalea squalenifaciens DSM 18772])

HSP 1 Score: 361.688 bits (927), Expect = 4.340e-122
Identity = 194/261 (74.33%), Postives = 219/261 (83.91%), Query Frame = 0
Query:    4 AFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTRDKHKNSTFIVEDRRKAKRR 264
             F+EITKS PEKSL    K++GGRNN+GRIT RHIGGGHK+KYRLIDFKR K +  ATV+ IEYDPNRTCRIAL+EY DG KSYILAP GLT G+ V AGE   PK GNA PLK+VPLGTA+HNIE+ PG+GGK+AR+AGQQAI+++R+ GYA ++MPSGEIRKF+E    TIG VGNRDHMNE+SGKAGRTRWQG RP+VRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTR K K S   +  RRK K R
Sbjct:   20 TFEEITKSTPEKSLTAPLKKTGGRNNRGRITCRHIGGGHKRKYRLIDFKRRKFDVEATVVAIEYDPNRTCRIALIEYADGQKSYILAPVGLTVGNTVVAGEKVAPKPGNATPLKNVPLGTAVHNIELVPGAGGKVARSAGQQAIVSNRETGYALVKMPSGEIRKFNENCLCTIGQVGNRDHMNEVSGKAGRTRWQGVRPTVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTRKKKKASDKFIVQRRKTKNR 280          
BLAST of 50s ribosomal protein l2 vs. nr
Match: gi|494035688|ref|WP_006977816.1| (50S ribosomal protein L2 [Chthoniobacter flavus] >gi|196227861|gb|EDY22364.1| ribosomal protein L2 [Chthoniobacter flavus Ellin428])

HSP 1 Score: 349.747 bits (896), Expect = 3.496e-117
Identity = 181/267 (67.79%), Postives = 214/267 (80.15%), Query Frame = 0
Query:    2 LPAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGH-TKGQKTRDKHKNSTFIVEDRRKAKRRPYV 267
            LPAFDEITK+KPEKSL+ +K+RSGGRNN GRIT RHIGGGHK+KYR+IDFKR KRN  A V  IEYDPNRTCRIALL+YPDG K+YILAP GL  G KV AGE  EPK+GNA+PL ++PLGTAIHN+E+  G GG+IAR+AGQ  +L +R+  YA +++PSGEIRK H + YATIG VGN +HMN  SGKAGR+RW+G RP+VRGM MNPVDHP GGG+GKSK GGGR H  SPWG   KG KTR KHK S   + +RRK+K++  V
Sbjct:   18 LPAFDEITKTKPEKSLVVIKRRSGGRNNNGRITCRHIGGGHKQKYRIIDFKRKKRNVEAEVKAIEYDPNRTCRIALLQYPDGEKAYILAPVGLNVGDKVSAGEAVEPKIGNALPLSAIPLGTAIHNVELVAGRGGQIARSAGQLVMLNNREGDYALVKLPSGEIRKIHIKCYATIGQVGNTEHMNVSSGKAGRSRWRGVRPTVRGMVMNPVDHPMGGGQGKSKGGGGRHHPMSPWGQLAKGFKTRRKHKPSNSFIIERRKSKKKSQV 284          
BLAST of 50s ribosomal protein l2 vs. nr
Match: gi|820846517|ref|XP_012341205.1| (PREDICTED: 50S ribosomal protein L2, chloroplastic-like [Apis florea])

HSP 1 Score: 343.199 bits (879), Expect = 4.737e-114
Identity = 180/336 (53.57%), Postives = 220/336 (65.48%), Query Frame = 0
Query:    5 FDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWG-HTKGQKTRDKHKNSTFIVEDRRKAKRRPYVDQKLLAKIDAAAEGGNKKPIKTWSRRSMITPDFVGHNFAVHNGKTFVPVFVSENMVGHKLGEFSPTRIFKAH 339
            F EITKSKPE++LLE +  + GRN+ G IT RH GGGHK+KYR+IDFKR K N  A V  IEYDPNRT  IALL Y DG K+YILAP GL  G  VE+G NA+ K GNA+PLK++P GT+IHNIE+RPG GG++ R+AG  A +   D  Y  +R+ SGE+RK      ATIG VGN  H     GKAGR+RW G+RP  RG  MNP DHP+GGGEGK+    GR    +PWG   +G KTR+                     +  LL K+DA A+   K+ IKTWSRRS I P FVG   AV++G+  VPV+++E+MVGHKLGEF PTR F  H
Sbjct:    6 FAEITKSKPERTLLESQSHTAGRNSYGHITSRHRGGGHKQKYRIIDFKRNKDNAKAVVKAIEYDPNRTANIALLHYTDGIKAYILAPKGLKVGDVVESGPNADIKPGNALPLKNIPTGTSIHNIELRPGKGGQLVRSAGANAQVLGSDGKYTLVRLQSGEVRKILSTCRATIGVVGNEQHSLIQLGKAGRSRWLGRRPQSRGSVMNPNDHPHGGGEGKAPV--GRPQPMTPWGKKARGIKTRN---------------------NASLLKKVDAQADTEKKQVIKTWSRRSTIFPSFVGLTIAVYDGRKHVPVYITEDMVGHKLGEFVPTRTFHGH 318          
BLAST of 50s ribosomal protein l2 vs. nr
Match: gi|524406453|emb|CDB55411.1| (50S ribosomal protein L2 [Akkermansia muciniphila CAG:154])

HSP 1 Score: 339.347 bits (869), Expect = 1.024e-113
Identity = 174/232 (75.00%), Postives = 197/232 (84.91%), Query Frame = 0
Query:   31 GRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTRDKHKNSTFIVEDRRKAK 262
            G IT RHIGGGHK+KYRL+DFKR K +  ATV+ IEYDPNRTCRIAL+EY DG KSYILAPTGL  G KVE+G+   PKVGNAMPLK+VPLGT++HNIEIRPGSGGK+ARAAGQQAI+++R+ GYA I+MPSGEIR+F+E+ Y TIG VGN  HMNE+SGKAGRTRW G RP+VRGM MNPVDHPNGGGEGKSKSGGGRQHLKSPWGH KGQKTR   K S  ++  RR AK
Sbjct:   11 GXITTRHIGGGHKRKYRLVDFKRNKFDVPATVLTIEYDPNRTCRIALIEYKDGEKSYILAPTGLQVGMKVESGQKVAPKVGNAMPLKNVPLGTSVHNIEIRPGSGGKVARAAGQQAIVSNREAGYALIKMPSGEIRRFNEDCYCTIGQVGNTQHMNEMSGKAGRTRWMGVRPTVRGMTMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHVKGQKTRRLRKPSDSVIVQRRNAK 242          
BLAST of 50s ribosomal protein l2 vs. nr
Match: gi|1028412125|gb|OAI42630.1| (50S ribosomal protein L2 [Verrucomicrobia bacterium SCGC AG-212-E04])

HSP 1 Score: 340.117 bits (871), Expect = 2.082e-113
Identity = 179/265 (67.55%), Postives = 211/265 (79.62%), Query Frame = 0
Query:    1 MLPAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGH-TKGQKTRDKHKNST-FIVEDRRKAKR 263
            M PAFDEITKSKPE+SL E  ++SGGRNN GR+T+RH GGGHK++YRL+DFKR K    ATV+ +EYDPNRT RIAL++Y DG KSYIL P GL  G KV +G +A P++GNA+PL  +PLGT IHNIE RPG GG+IAR+AGQ A+L +R+ GYA ++MPSGEIRK HE  YATIG VGN DHMN ISGKAGR+RWQG+RP+VRGM MNP+DHP GGG+GKSK GGGR H  SPWG  +KG KTR KHK S  FIVE R K K+
Sbjct:   17 MTPAFDEITKSKPERSLTEPLRKSGGRNNTGRLTVRHRGGGHKRRYRLVDFKRQKFGMEATVLAVEYDPNRTARIALIQYTDGEKSYILWPVGLAVGAKVMSGPDAAPEIGNALPLSVIPLGTNIHNIEFRPGHGGQIARSAGQIAVLNNREGGYALVKMPSGEIRKIHENCYATIGQVGNVDHMNVISGKAGRSRWQGRRPTVRGMVMNPIDHPMGGGQGKSKGGGGRHHPVSPWGQLSKGFKTRRKHKPSDKFIVERRTKKKK 281          
The following BLAST results are available for this feature:
BLAST of 50s ribosomal protein l2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000035714.242e-1436.89supercontig:LSalAtl2s:LSalAtl2s1961:17450:19162:1 ... [more]
EMLSAG000000036559.564e-1229.70supercontig:LSalAtl2s:LSalAtl2s199:35720:40272:-1 ... [more]
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BLAST of 50s ribosomal protein l2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|226699327|sp|B2UMT7.1|RL2_AKKM84.687e-13174.05RecName: Full=50S ribosomal protein L2[more]
gi|226702906|sp|B3EP58.1|RL2_CHLPB2.140e-10360.62RecName: Full=50S ribosomal protein L2[more]
gi|160358745|sp|A1BJ31.2|RL2_CHLPD8.730e-10063.98RecName: Full=50S ribosomal protein L2[more]
gi|226702905|sp|B3QR83.1|RL2_CHLP83.089e-9963.08RecName: Full=50S ribosomal protein L2[more]
gi|42559264|sp|Q8KAH5.1|RL2_CHLTE2.291e-9862.93RecName: Full=50S ribosomal protein L2[more]
gi|115305466|sp|Q3APH6.1|RL2_CHLCH2.367e-9863.60RecName: Full=50S ribosomal protein L2[more]
gi|226702979|sp|B4S5M4.1|RL2_PROA24.911e-9863.22RecName: Full=50S ribosomal protein L2[more]
gi|254764707|sp|B8D0C7.1|RL2_HALOH7.879e-9756.65RecName: Full=50S ribosomal protein L2[more]
gi|189042586|sp|A9BHA2.1|RL2_PETMO8.124e-9759.07RecName: Full=50S ribosomal protein L2[more]
gi|226702908|sp|B3QY27.1|RL2_CHLT34.175e-9659.54RecName: Full=50S ribosomal protein L2[more]

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BLAST of 50s ribosomal protein l2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1110139427|emb|SHK36561.1|4.340e-12274.33LSU ribosomal protein L2P [Rubritalea squalenifaci... [more]
gi|494035688|ref|WP_006977816.1|3.496e-11767.7950S ribosomal protein L2 [Chthoniobacter flavus] >... [more]
gi|820846517|ref|XP_012341205.1|4.737e-11453.57PREDICTED: 50S ribosomal protein L2, chloroplastic... [more]
gi|524406453|emb|CDB55411.1|1.024e-11375.0050S ribosomal protein L2 [Akkermansia muciniphila ... [more]
gi|1028412125|gb|OAI42630.1|2.082e-11367.5550S ribosomal protein L2 [Verrucomicrobia bacteriu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold2261_size17928supercontigscaffold2261_size17928:13789..14897 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold2261_size17928-processed-gene-0.6-mRNA-1snap_masked-scaffold2261_size17928-processed-gene-0.6-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold2261_size17928:13789..14897+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold2261_size17928-processed-gene-0.6 ID=snap_masked-scaffold2261_size17928-processed-gene-0.6|Name=50s ribosomal protein l2|organism=Tigriopus kingsejongensis|type=gene|length=1109bp|location=Sequence derived from alignment at scaffold2261_size17928:13789..14897+ (Tigriopus kingsejongensis)
ATGCTTCCGGCATTTGACGAGATCACCAAATCAAAGCCTGAAAAAAGCCT CCTCGAAGTTAAGAAACGCTCCGGTGGCCGCAATAACCAGGGCCGTATCA CCATGCGCCACATCGGCGGTGGTCATAAGAAGAAATATCGTCTCATCGAC TTCAAGCGCATGAAGCGTAACGAGGTTGCGACCGTGATTGGGATCGAATA TGATCCCAACCGCACCTGCCGCATCGCTCTCCTTGAGTATCCCGATGGCA CGAAGTCTTACATCCTCGCTCCGACCGGCCTGACCGATGGTCACAAGGTG GAAGCTGGTGAAAATGCCGAGCCTAAGGTCGGCAACGCCATGCCTCTTAA GAGCGTGCCTCTCGGCACCGCGATTCACAACATCGAGATCCGCCCCGGTT CCGGTGGCAAGATCGCCCGCGCCGCCGGCCAGCAAGCGATCCTCGCTTCT CGCGATGAAGGTTACGCCTTCATCAGAATGCCTTCCGGTGAGATCCGTAA GTTCCACGAGGAGTCTTACGCAACCATCGGCACCGTCGGTAACCGCGACC ACATGAACGAGATTTCCGGCAAAGCTGGTCGTACTCGCTGGCAGGGCAAG CGCCCTTCCGTCCGCGGCATGTGCATGAACCCTGTCGATCACCCCAACGG TGGTGGTGAGGGTAAGTCCAAGTCCGGTGGTGGTCGTCAGCACCTCAAAT CACCTTGGGGTCACACCAAGGGTCAAAAGACTCGTGACAAGCACAAGAAT AGCACCTTCATCGTCGAAGATCGCCGCAAAGCGAAGCGCCGTTAAATTTG TCTCTCTTAACTTTCTAATCTACCTACCACTTTACTCAAATGGCACGTTC ACTGAAAAAAGGCCCATACGTCGATCAAAAGCTCCTCGCCAAGATCGATG CAGCGGCTGAAGGCGGCAATAAAAAGCCCATCAAGACCTGGAGCCGTCGC TCCATGATCACTCCCGACTTCGTCGGTCACAACTTCGCCGTCCACAACGG CAAAACCTTCGTCCCTGTTTTCGTTTCCGAAAACATGGTGGGCCACAAGC TGGGTGAGTTTTCTCCCACCCGCATCTTCAAGGCTCACGGCGGCATCGGT AAGAAGTAA
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Synonyms
The feature '50s ribosomal protein l2' has the following synonyms
Synonym
Tk06911
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