50s ribosomal protein l2, snap_masked-scaffold2261_size17928-processed-gene-0.6 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 50s ribosomal protein l2 vs. L. salmonis genes
Match: EMLSAG00000003571 (supercontig:LSalAtl2s:LSalAtl2s1961:17450:19162:1 gene:EMLSAG00000003571 transcript:EMLSAT00000003571 description:"maker-LSalAtl2s1961-snap-gene-0.17") HSP 1 Score: 69.707 bits (169), Expect = 4.242e-14 Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 0 Query: 106 AEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASR--DEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRT--RWQGKR---PSVRGMCMNPVDHPNGGGE 220 AE N MP+ S+P GT I N+E + G G+IAR +G A + + D +++PSG + + A +G V +++ KAGR +++ KR P VRG+ MNPV+HP+GGG Sbjct: 59 AEVHFRNVMPIGSMPEGTIISNLEEKTGDRGRIARGSGNYATVIAHNPDTKRTRVKLPSGTKKIIPSANRAMVGIVAGGGRIDKPMLKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGN 180
BLAST of 50s ribosomal protein l2 vs. L. salmonis genes
Match: EMLSAG00000003655 (supercontig:LSalAtl2s:LSalAtl2s199:35720:40272:-1 gene:EMLSAG00000003655 transcript:EMLSAT00000003655 description:"maker-LSalAtl2s199-augustus-gene-0.16") HSP 1 Score: 64.3142 bits (155), Expect = 9.564e-12 Identity = 60/202 (29.70%), Postives = 87/202 (43.07%), Query Frame = 0 Query: 18 LEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNE---------VATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKV------GNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQA-ILASRDEGYAFIRMPSGEIR-KFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRP 202 L++ K G GR + IGGG K+K R I R + E + VI + Y+P +IAL Y + +ILA GL+ G +++ + PK+ GN+ P+ ++P GT I +E G G R AG A IL D+ IR + +I + +G V G R RW G RP Sbjct: 167 LDITKLGGRDPETGRKVVEGIGGGXKQKARWIHPHRFPKEEESLSDEDVFLEKVISVCYNPLSDAQIALTAYGKKMR-WILAVEGLSVGXILKS-THIIPKIPIQTSPGNSHPIGALPFGTEICCMEFVSGEGMTFIRDAGNSATILRDYDDKRVVIRNNNKKIEYAVDKWCQCVVGKVSTHPLKKLPIGSPNRMRWMGNRP 366
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|226702947|sp|A9B415.1|RL2_HERA2 (RecName: Full=50S ribosomal protein L2) HSP 1 Score: 280.026 bits (715), Expect = 1.701e-92 Identity = 143/257 (55.64%), Postives = 181/257 (70.43%), Query Frame = 0 Query: 5 FDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGH-TKGQKTRDKHKNSTFIVEDRRK 260 F EITK +PEKSL E K+ GRNN G IT RH GGGHK++YRLIDFKR K + A V GIEYDPNR+ IALL Y DG K YI+AP GL G + AG NAE +VGNA+PL ++P+G+ IHNIE+ PG GG++ R+AG A L +R+ YA +R+PSGE+R H + AT+G VGN DH N + GKAGR+RW G+RP VRG MNPVDHP+GGGEG++ +G + K+ WG G+KTR + FIV R++ Sbjct: 21 FAEITKFEPEKSLTEPLKKHAGRNNHGHITTRHRGGGHKRRYRLIDFKRKKFDIPAKVAGIEYDPNRSANIALLHYTDGEKRYIIAPLGLKVGDTLMAGPNAEIRVGNALPLANIPIGSQIHNIELTPGRGGQLVRSAGNTAQLMAREGNYATVRLPSGEMRMVHIKCMATLGQVGNVDHQNIMIGKAGRSRWLGRRPVVRGSAMNPVDHPHGGGEGRAPTG---MNPKTKWGKPAMGKKTRHNPRTQRFIVRTRKQ 274
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|122272467|sp|Q03ZP2.1|RL2_LEUMM (RecName: Full=50S ribosomal protein L2) HSP 1 Score: 280.026 bits (715), Expect = 1.837e-92 Identity = 148/257 (57.59%), Postives = 181/257 (70.43%), Query Frame = 0 Query: 5 FDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWG-HTKGQKTRDKHKNST-FIVEDRR 259 F EITK+ PEKSLL K ++G RN GR+T+RH GGHK+ YR++DFKR K ++ ATV IEYDPNRT IALL Y DG KSYILAP GL G KV++G +A+ K GNA+PL ++P GT IHNIE++PG GG++AR+AG A + RD Y +R+ SGE+R + ATIG VGN +H GKAGR RW+GKRP VRG MNP DHP+GGGEGK+ GR SPWG T G+KTRDK K ST FIV R+ Sbjct: 21 FAEITKTTPEKSLLAKKSKTGARNASGRMTVRHHAGGHKQAYRIVDFKRTKDDKTATVKAIEYDPNRTANIALLVYEDGIKSYILAPKGLKVGDKVQSGPDADIKPGNALPLSAIPEGTLIHNIELKPGKGGQLARSAGASAQILGRDGKYIIVRLTSGEVRLVLATNRATIGEVGNAEHSLINWGKAGRNRWRGKRPHVRGSVMNPNDHPHGGGEGKAPV--GRPSPMSPWGKKTAGKKTRDKKKASTKFIVRGRK 275
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|160419193|sp|A6MW04.1|RK2_RHDSA (RecName: Full=50S ribosomal protein L2, chloroplastic) HSP 1 Score: 279.641 bits (714), Expect = 2.776e-92 Identity = 142/257 (55.25%), Postives = 181/257 (70.43%), Query Frame = 0 Query: 5 FDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGH-TKGQKTRDKHKNSTFIVEDRRK 260 F EITKSKPEKSLL K + GRN++G IT+RH GGGHK++YR++DFKR KR+ A V I+YDPNR RIALL Y DG K YILAP L+ G +V AGE A VGNA+PL ++PLGT++HNIE+ PG GG+I RAAG A + +++ + +++PS E+R +++ YATIG VGN + N GKAGR RW G RP+VRG+ MNP DHP+GGGEG+S GR +PWG G KTR K+K S F + RRK Sbjct: 21 FSEITKSKPEKSLLAKKTQKAGRNHRGVITVRHRGGGHKQRYRIVDFKRNKRDIEAKVASIQYDPNRNARIALLHYKDGEKRYILAPKNLSVGAQVSAGETAPLDVGNALPLSNIPLGTSVHNIELLPGKGGQIIRAAGTSAQIVAKEGNFVTLKLPSSEVRMVYKQCYATIGEVGNAEFKNLTLGKAGRKRWLGIRPTVRGVVMNPCDHPHGGGEGRSPI--GRARPVTPWGAPALGMKTRRKNKYSDFCIIRRRK 275
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|122265376|sp|Q03EB9.1|RL2_PEDPA (RecName: Full=50S ribosomal protein L2) HSP 1 Score: 278.87 bits (712), Expect = 7.567e-92 Identity = 145/260 (55.77%), Postives = 185/260 (71.15%), Query Frame = 0 Query: 5 FDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWG-HTKGQKTRDKH-KNSTFIVEDRRKAK 262 + EITK PEKSLLE + + GRNN GR+T+RH GGG+K++YR+IDFKR+K + ATV IEYDPNRT IALL Y DG KSYI+AP GL G KV++G A+ KVGNA+PLK +P+GT IHNIE++PG GG++ R+AG A L ++ Y IR+ S E+R + ATIG VGN +H GKAGRTR+ G+RP VRG MNP DHP+GGGEGK+ GR SPWG T G+KTR+KH K++ FIV R++ + Sbjct: 21 YSEITKKSPEKSLLESQSHTAGRNNYGRMTVRHRGGGNKRQYRIIDFKRIKDDVPATVKAIEYDPNRTANIALLVYADGVKSYIIAPKGLKVGDKVQSGSEADIKVGNALPLKDIPVGTVIHNIELKPGKGGQLVRSAGASAQLLGKEGKYVLIRLASSEVRMVLATNRATIGAVGNEEHELVNVGKAGRTRYAGQRPHVRGSVMNPNDHPHGGGEGKAPI--GRPSPLSPWGKKTIGKKTRNKHNKSNKFIVRGRKRGR 278
BLAST of 50s ribosomal protein l2 vs. SwissProt
Match: gi|42559195|sp|Q7MTL6.1|RL2_PORGI (RecName: Full=50S ribosomal protein L2 >gi|226702978|sp|B2RLY9.1|RL2_PORG3 RecName: Full=50S ribosomal protein L2) HSP 1 Score: 278.1 bits (710), Expect = 1.218e-91 Identity = 151/262 (57.63%), Postives = 189/262 (72.14%), Query Frame = 0 Query: 1 MLPAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWG-HTKGQKTRDKHKNST-FIVEDRRK 260 ++ AFD+IT S PEKSL+ KK++GGRNN G++TMR+IGGGHK+KYR IDFKR K ATV IEYDPNR+ RIALL Y DG K+YI+AP GL GH V +G A P+VGNA+PL ++P+GT IHNIE+RPG G K+ R+AG A L SR+ Y I+MPSGE+R+ ATIG+VGN DH E SGKAGR+RW G+RP RG+ MNPVDHP GGGEG+ H +S G + KG KTR K+S+ +I+E R+K Sbjct: 17 VIGAFDKITASTPEKSLVVGKKKTGGRNNTGKMTMRYIGGGHKQKYRFIDFKRTKDGIPATVKTIEYDPNRSSRIALLYYADGAKAYIIAPDGLEVGHTVMSGSEAAPEVGNALPLANIPVGTIIHNIELRPGQGAKMVRSAGSFAQLTSREGTYVVIKMPSGEVRRILSTCKATIGSVGNSDHALEKSGKAGRSRWLGRRPHNRGVVMNPVDHPMGGGEGRQSG----GHPRSRKGLYAKGLKTRAPKKHSSKYIIERRKK 274
BLAST of 50s ribosomal protein l2 vs. nr
Match: gi|1200467446|gb|OUV82756.1| (50S ribosomal protein L2 [Verrucomicrobiaceae bacterium TMED137]) HSP 1 Score: 489.189 bits (1258), Expect = 2.607e-172 Identity = 246/264 (93.18%), Postives = 259/264 (98.11%), Query Frame = 0 Query: 1 MLPAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTRDKHKNSTFIVEDRRKAKRR 264 MLP FDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKR KR++VATV+GIEYDPNRTCRIALLEY DGTKSYILAP+GLTDGHKVEAGE+ EPKVGNAMPLK+VPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAF++MPSGE+RKFH+ESYATIGTVGNRDHMNE+SGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTR KHKNSTFIVEDRRK+KR+ Sbjct: 17 MLPGFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRSKRDQVATVVGIEYDPNRTCRIALLEYKDGTKSYILAPSGLTDGHKVEAGESVEPKVGNAMPLKNVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFVKMPSGELRKFHQESYATIGTVGNRDHMNEVSGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTRRKHKNSTFIVEDRRKSKRK 280
BLAST of 50s ribosomal protein l2 vs. nr
Match: gi|517944118|ref|WP_019114326.1| (MULTISPECIES: 50S ribosomal protein L2 [unclassified Verrucomicrobia (miscellaneous)]) HSP 1 Score: 485.337 bits (1248), Expect = 8.495e-171 Identity = 246/264 (93.18%), Postives = 257/264 (97.35%), Query Frame = 0 Query: 1 MLPAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTRDKHKNSTFIVEDRRKAKRR 264 MLP FDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKR KR+ VATV+GIEYDPNRTCRIALLEY DGTKSYILAP+GLTDGHKVEAGE+ EPKVGNAMPLK+VPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAF++MPSGE+RKFH+ESYATIGTVGNRDHM EISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTR KHKNSTFIVEDRRK+KR+ Sbjct: 17 MLPGFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRTKRDVVATVVGIEYDPNRTCRIALLEYKDGTKSYILAPSGLTDGHKVEAGESVEPKVGNAMPLKNVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFVKMPSGELRKFHQESYATIGTVGNRDHMKEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTRRKHKNSTFIVEDRRKSKRK 280
BLAST of 50s ribosomal protein l2 vs. nr
Match: gi|1200395058|gb|OUV13015.1| (50S ribosomal protein L2 [Verrucomicrobiaceae bacterium TMED86]) HSP 1 Score: 450.284 bits (1157), Expect = 6.106e-157 Identity = 229/265 (86.42%), Postives = 247/265 (93.21%), Query Frame = 0 Query: 1 MLPAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTRDKHK-NSTFIVEDRRKAKRR 264 MLP FDEITKSKPEKSLLEVKKRSGGRNNQGRIT RHIGGGHKKKYRL+DFKR KR++VA V+GIEYDPNRTCRIALL+Y DGTKSYILAP+GLTDG KV +GE+ EPKVGNAMPLK+VPLGTAIHNIE+RPGSGGK+AR+AGQQAIL SR+ GYAFI+MPSGE+RKFHEESYATIGTVGNRDHM EISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGH KGQKTR KH +FI+EDRRK KR+ Sbjct: 17 MLPGFDEITKSKPEKSLLEVKKRSGGRNNQGRITCRHIGGGHKKKYRLVDFKRTKRDQVAEVVGIEYDPNRTCRIALLKYEDGTKSYILAPSGLTDGDKVVSGESVEPKVGNAMPLKNVPLGTAIHNIELRPGSGGKVARSAGQQAILQSREGGYAFIKMPSGELRKFHEESYATIGTVGNRDHMKEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHVKGQKTRKKHNPTDSFIIEDRRKNKRK 281
BLAST of 50s ribosomal protein l2 vs. nr
Match: gi|1232180473|gb|OYV07089.1| (50S ribosomal protein L2 [Verrucomicrobiales bacterium VVV1]) HSP 1 Score: 408.683 bits (1049), Expect = 1.306e-140 Identity = 198/263 (75.29%), Postives = 223/263 (84.79%), Query Frame = 0 Query: 2 LPAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTRDKHK-NSTFIVEDRRKAKR 263 LP F E+TKSKPEKSLL+ KRSGGRNN GRIT RHIGGGHK+ YRLIDF+R K + ATV+GIEYDPNRTCRIALL+Y DG KSYILAP GL G V +G N PK GNAMPLKSVPLGTAIHNIE++PG GGK+ARAAGQQAIL++R+ G+A ++MPSGEIR+F+EE + TIG VGNRDHMNE SGKAGR+RWQG RP+VRGM MNPVDHPNGGGEG+SKSGGGRQHL SPWGH KGQKTR+K K + FIVE R KAKR Sbjct: 18 LPDFQEVTKSKPEKSLLQPLKRSGGRNNTGRITCRHIGGGHKRHYRLIDFRRRKHDVTATVVGIEYDPNRTCRIALLQYTDGQKSYILAPAGLEVGATVASGNNVAPKPGNAMPLKSVPLGTAIHNIELQPGGGGKVARAAGQQAILSNREGGWALVKMPSGEIRRFNEECFCTIGAVGNRDHMNESSGKAGRSRWQGVRPTVRGMTMNPVDHPNGGGEGRSKSGGGRQHLLSPWGHAKGQKTRNKKKPTNAFIVESRHKAKR 280
BLAST of 50s ribosomal protein l2 vs. nr
Match: gi|918704679|ref|WP_052573709.1| (50S ribosomal protein L2 [Haloferula sp. BvORR071]) HSP 1 Score: 387.497 bits (994), Expect = 4.057e-132 Identity = 200/264 (75.76%), Postives = 224/264 (84.85%), Query Frame = 0 Query: 1 MLPAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTRDKHK-NSTFIVEDRRKAKR 263 +LP+FDEITK KPEKSLL KRSGGRNN GRIT RHIGGGHK+ YRLIDFKR K + ATV+GIEYDPNRTCRIAL++Y DG KSYILAP GL G V +GE PKVGNAMPLKSVPLGTAIHNIE+ PG+GGK+AR+AGQQA+L++R+ G+A ++MPSGEIR+F+E + TIGTVGNRDHMNE+SGKAGRTRWQG RP+VRGMCMNPVDHPNGGGEGKSKSGGGRQHL SPWGH KGQKTR K STFIVE R KR Sbjct: 17 VLPSFDEITKHKPEKSLLTPLKRSGGRNNTGRITTRHIGGGHKRHYRLIDFKRGKADVPATVVGIEYDPNRTCRIALIQYKDGVKSYILAPAGLEVGATVVSGEKVAPKVGNAMPLKSVPLGTAIHNIELLPGNGGKVARSAGQQAVLSNREGGWALVKMPSGEIRRFNEACFCTIGTVGNRDHMNEVSGKAGRTRWQGVRPTVRGMCMNPVDHPNGGGEGKSKSGGGRQHLTSPWGHAKGQKTRKPKKVTSTFIVESRHSKKR 280
BLAST of 50s ribosomal protein l2 vs. nr
Match: gi|1240606968|gb|PAW61484.1| (50S ribosomal protein L2 [Verrucomicrobiae bacterium Tous-C3TDCM] >gi|1241360560|gb|PAZ04263.1| 50S ribosomal protein L2 [Verrucomicrobiae bacterium AMD-G2]) HSP 1 Score: 385.956 bits (990), Expect = 1.166e-131 Identity = 188/259 (72.59%), Postives = 214/259 (82.63%), Query Frame = 0 Query: 3 PAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTRDKHK-NSTFIVEDRRK 260 P FDEITK PEKSLL KRSGGRNN GRITMRH+GGG K+ YRL+DFKR K + ATV+GIEYDPNRTCRIAL++Y DGTKSYILAP GL G V + A+PK GNAMPLKSVPLGT IHNIE+ PGSGGK+ARAAGQQAIL++R+ G+ ++MPSGEIR+F+E TIG VGNR+HMNE+SGKAGRTRW G RP+VRGM MNPVDHPNGGGEG+SKSGGGR+HL SPWGH KGQKTR+K K +S FIV R K Sbjct: 19 PTFDEITKHTPEKSLLSPIKRSGGRNNTGRITMRHVGGGAKRHYRLVDFKRNKVDMPATVVGIEYDPNRTCRIALIQYTDGTKSYILAPVGLEVGASVISTLKADPKPGNAMPLKSVPLGTVIHNIELLPGSGGKVARAAGQQAILSNREAGFGLVKMPSGEIRRFNENCICTIGQVGNREHMNEVSGKAGRTRWMGVRPTVRGMTMNPVDHPNGGGEGRSKSGGGRKHLLSPWGHAKGQKTRNKKKASSIFIVSPRPK 277
BLAST of 50s ribosomal protein l2 vs. nr
Match: gi|1200258792|gb|OUT81877.1| (50S ribosomal protein L2 [Roseibacillus sp. TMED18]) HSP 1 Score: 382.874 bits (982), Expect = 2.368e-130 Identity = 189/264 (71.59%), Postives = 224/264 (84.85%), Query Frame = 0 Query: 1 MLPAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTRDKHKNSTFIVEDRRKAKRR 264 + P+++EITK KPEK L E RSGGRNNQG+IT RHIGGGHK+KYRL+DF+R KR A V +EYDPNRTCRIAL++Y DG KSYIL P+GL G V+AGENA P GNA+PL+SVPLGTA+HNIE+RPG GGK+AR+AGQQA++++R+ GYA ++MPSGEIR+FHE Y TIG VGNRDHMNE+SGKAGRTRW+G RP+VRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQ+TR K+K S + +RR AK+R Sbjct: 17 VWPSYEEITKKKPEKELTEPLPRSGGRNNQGKITCRHIGGGHKRKYRLVDFRRRKREVEARVTAVEYDPNRTCRIALIQYSDGEKSYILCPSGLQVGATVQAGENAPPTPGNALPLRSVPLGTAVHNIELRPGGGGKVARSAGQQAVVSNREGGYALVKMPSGEIRRFHENCYCTIGQVGNRDHMNEVSGKAGRTRWKGVRPTVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQRTRSKYKGSNKFIVERRNAKKR 280
BLAST of 50s ribosomal protein l2 vs. nr
Match: gi|1056323212|ref|WP_067774706.1| (50S ribosomal protein L2 [Akkermansia glycaniphila] >gi|1043325867|gb|OCA03317.1| 50S ribosomal protein L2 [Akkermansia glycaniphila] >gi|1093280271|emb|SEH80611.1| rplb bact: ribosomal protein ul2 [Akkermansia glycaniphila]) HSP 1 Score: 379.407 bits (973), Expect = 5.032e-129 Identity = 193/262 (73.66%), Postives = 218/262 (83.21%), Query Frame = 0 Query: 1 MLPAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTRDKHKNSTFIVEDRRKAK 262 +LP+FDEITKS PEKSLL ++SGGRNN GRIT RHIGGGHK+ YRL+DF R KRN ATV+ +EYDPNRTCRIAL++Y DG KSYILAP GL G VE+GE PKVGNAMPLKSVPLGTA+HNIEIRPGSGGKIAR+AGQQAIL++R+ G+A ++MPSGEIRKF+E + T+G VGN HMNE SGKAGRTRW G RP+VRGMCMNPVDHPNGGGEGKSKSGGGRQHL SPWGH KGQKTR K S + RRK+K Sbjct: 17 VLPSFDEITKSTPEKSLLAPLRKSGGRNNNGRITTRHIGGGHKRHYRLVDFLRGKRNVPATVLAVEYDPNRTCRIALIQYKDGEKSYILAPVGLAVGATVESGEKVAPKVGNAMPLKSVPLGTAVHNIEIRPGSGGKIARSAGQQAILSNREGGFALVKMPSGEIRKFNENCFCTVGQVGNTQHMNETSGKAGRTRWLGIRPTVRGMCMNPVDHPNGGGEGKSKSGGGRQHLSSPWGHVKGQKTRRLRKPSDAFIVQRRKSK 278
BLAST of 50s ribosomal protein l2 vs. nr
Match: gi|501387792|ref|WP_012419358.1| (50S ribosomal protein L2 [Akkermansia muciniphila] >gi|226699327|sp|B2UMT7.1|RL2_AKKM8 RecName: Full=50S ribosomal protein L2 >gi|187424864|gb|ACD04143.1| ribosomal protein L2 [Akkermansia muciniphila ATCC BAA-835] >gi|1045276814|gb|ANU61504.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1125127028|gb|OLA88040.1| 50S ribosomal protein L2 [Akkermansia sp. 54_46] >gi|1198440234|gb|OUN28107.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1208464028|gb|ASB34998.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329749130|gb|PNC05006.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329764003|gb|PNC19396.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329764587|gb|PNC19975.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329768314|gb|PNC23661.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329771208|gb|PNC26538.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329773344|gb|PNC28629.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329779395|gb|PNC34578.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329783007|gb|PNC38110.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329785462|gb|PNC40540.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329787713|gb|PNC42774.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329789369|gb|PNC44415.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329793729|gb|PNC48665.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329796383|gb|PNC51296.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329800747|gb|PNC55625.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329801907|gb|PNC56764.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329803405|gb|PNC58247.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329808014|gb|PNC62792.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329812816|gb|PNC67543.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329813850|gb|PNC68570.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329817735|gb|PNC72415.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329818870|gb|PNC73546.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329820629|gb|PNC75293.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329822589|gb|PNC77252.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329827205|gb|PNC81836.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329827907|gb|PNC82537.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329831296|gb|PNC85899.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329832271|gb|PNC86869.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329835602|gb|PNC90184.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329840687|gb|PNC95235.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329844891|gb|PNC99421.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329845561|gb|PND00090.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329848188|gb|PND02706.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329850975|gb|PND05473.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329851550|gb|PND06036.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329855252|gb|PND09675.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329859894|gb|PND14273.1| 50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329860278|gb|PND14655.1| 50S ribosomal protein L2 [Akkermansia muciniphila]) HSP 1 Score: 378.252 bits (970), Expect = 1.453e-128 Identity = 194/262 (74.05%), Postives = 220/262 (83.97%), Query Frame = 0 Query: 1 MLPAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTRDKHKNSTFIVEDRRKAK 262 + P+FDEIT S PEKSL K+SGGRNN GRIT RHIGGGHK+KYRL+DFKR K + ATV+ IEYDPNRTCRIAL+EY DG KSYILAPTGL G KVE+G+ PKVGNAMPLK+VPLGT++HNIEIRPGSGGK+ARAAGQQAI+++R+ GYA I+MPSGEIR+F+E+ Y TIG VGN HMNE+SGKAGRTRW G RP+VRGM MNPVDHPNGGGEGKSKSGGGRQHLKSPWGH KGQKTR K S ++ RR AK Sbjct: 17 VWPSFDEITTSTPEKSLCRPLKKSGGRNNNGRITTRHIGGGHKRKYRLVDFKRNKFDVPATVLTIEYDPNRTCRIALIEYKDGEKSYILAPTGLQVGMKVESGQKVAPKVGNAMPLKNVPLGTSVHNIEIRPGSGGKVARAAGQQAIVSNREAGYALIKMPSGEIRRFNEDCYCTIGQVGNTQHMNEMSGKAGRTRWMGVRPTVRGMTMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHVKGQKTRRLRKPSDSVIVQRRNAK 278
BLAST of 50s ribosomal protein l2 vs. nr
Match: gi|1332758449|ref|WP_102748875.1| (50S ribosomal protein L2 [Akkermansia muciniphila] >gi|1329836738|gb|PNC91312.1| 50S ribosomal protein L2 [Akkermansia muciniphila]) HSP 1 Score: 376.711 bits (966), Expect = 6.494e-128 Identity = 193/262 (73.66%), Postives = 220/262 (83.97%), Query Frame = 0 Query: 1 MLPAFDEITKSKPEKSLLEVKKRSGGRNNQGRITMRHIGGGHKKKYRLIDFKRMKRNEVATVIGIEYDPNRTCRIALLEYPDGTKSYILAPTGLTDGHKVEAGENAEPKVGNAMPLKSVPLGTAIHNIEIRPGSGGKIARAAGQQAILASRDEGYAFIRMPSGEIRKFHEESYATIGTVGNRDHMNEISGKAGRTRWQGKRPSVRGMCMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHTKGQKTRDKHKNSTFIVEDRRKAK 262 + P+FDEIT S PEKSL K+SGGRNN GRIT RHIGGGHK+KYRL+DFKR K + ATV+ IEYDPNRTCRIAL+EY DG KSYILAPTGL G KVE+G+ PKVGNAMPLK+VPLGT++HNIEIRPGSGGK+ARAAGQQAI+++R+ GYA I+MPSGEIR+F+E+ + TIG VGN HMNE+SGKAGRTRW G RP+VRGM MNPVDHPNGGGEGKSKSGGGRQHLKSPWGH KGQKTR K S ++ RR AK Sbjct: 17 VWPSFDEITTSTPEKSLCRPLKKSGGRNNNGRITTRHIGGGHKRKYRLVDFKRNKFDVPATVLTIEYDPNRTCRIALIEYKDGEKSYILAPTGLQVGMKVESGQKVAPKVGNAMPLKNVPLGTSVHNIEIRPGSGGKVARAAGQQAIVSNREAGYALIKMPSGEIRRFNEDCFCTIGQVGNTQHMNEMSGKAGRTRWMGVRPTVRGMTMNPVDHPNGGGEGKSKSGGGRQHLKSPWGHVKGQKTRRLRKPSDSVIVQRRNAK 278 The following BLAST results are available for this feature:
BLAST of 50s ribosomal protein l2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of 50s ribosomal protein l2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of 50s ribosomal protein l2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2261_size17928:13789..14897+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold2261_size17928-processed-gene-0.6 ID=snap_masked-scaffold2261_size17928-processed-gene-0.6|Name=50s ribosomal protein l2|organism=Tigriopus kingsejongensis|type=gene|length=1109bp|location=Sequence derived from alignment at scaffold2261_size17928:13789..14897+ (Tigriopus kingsejongensis)back to top Synonyms
The feature '50s ribosomal protein l2' has the following synonyms
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