cytoplasmic type 5, snap_masked-scaffold23_size669530-processed-gene-0.3 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of cytoplasmic type 5 vs. L. salmonis genes
Match: EMLSAG00000008694 (supercontig:LSalAtl2s:LSalAtl2s539:269247:270712:-1 gene:EMLSAG00000008694 transcript:EMLSAT00000008694 description:"maker-LSalAtl2s539-augustus-gene-1.16") HSP 1 Score: 240.35 bits (612), Expect = 5.608e-76 Identity = 143/429 (33.33%), Postives = 226/429 (52.68%), Query Frame = 0 Query: 5 EIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-RPRHVGVMVGMG--------KKDSYIGEEAQSKRGI--LSLRYP---------IEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERG---------------------------------YSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGV----HETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAP---PERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHR 373 E ALV D G + G+AG+D P+A PS VG P H + K G+ + + I SL YP ++ G++ NW+ E++ ++++ ++ EEHPVL +EAP N KA REK+T+IMFE +N+PA ++ A+L+ +A+GR++G+V+DSG T +P+++GY L AI++ LAG LT + L ER S+ N R +++D + + V+ DE T S+ Q YE P+G + +ERF+ PEALF P+ + V S+ CD+D+R LY +++++GG+++ G DR++++L P++M++K+I+ ER+Y WIGGSILASL +FQQMWI+K E+ E+G V R Sbjct: 10 EXGALVFDPGHFSFRVGYAGEDCPKAEIPSFVGVAPEHEKEVSQESMEIDGTDTKPRLNTGKNGKLRYYIDTCSLHYPKKGMEISTFMKDGMIDNWEVFEELMNYSYSQIIKSKAEEHPVLFSEAPWNQKARREKLTEIMFEKYNIPAFFLAKNAILAAFANGRSSGLVLDSGATHTSAIPVHDGYVLQQAIVKSPLAGDFLTSQCKQFLDERNVEIIPPYIIASKEEVKEGDPPKWTKKKNIPDVTMSWHNYMCRNVIQDFQTSVLQVSDCSYDEETI---STIPHQSYEFPNGYNDEYESERFKIPEALFDPSIIRAPQAASMLSPAHVVTTSVGMCDIDLRPALYGSVIVTGGNSLLSGFTDRLNRDLSQKTPTNMRLKLISANGNQERRYGSWIGGSILASLGSFQQMWISKAEYQESGKVQVDR 435
BLAST of cytoplasmic type 5 vs. L. salmonis genes
Match: EMLSAG00000009807 (supercontig:LSalAtl2s:LSalAtl2s639:236938:238236:1 gene:EMLSAG00000009807 transcript:EMLSAT00000009807 description:"snap_masked-LSalAtl2s639-processed-gene-2.16") HSP 1 Score: 212.616 bits (540), Expect = 4.998e-66 Identity = 121/363 (33.33%), Postives = 193/363 (53.17%), Query Frame = 0 Query: 5 EIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAG 367 +I LVVD G+ K G+ D P + P+IVGR RH G M+ +G KD Y+G +AQ+ RGIL+L P++ G V NWDD++ ++ + L H VLLT PL+PK + +K+ I+ E+ V +Y+ ++ L++Y GRTTG+ +DSG+ T+ VP EG +P A L L G+ +TD L++ L YSF + R+ + + A + AR S + ++E+ S+ CD +R L SNI L GG+++ PG+ +R+ KEL L PS+ +++ A R++ W GG+ L+SL++FQ++WI++ +F E+G Sbjct: 3 DIRNLVVDLGTCTTKIGWCSDSEPHMMLPTIVGRGRHKGAMLNLGLKDRYVGRQAQNLRGILNLESPLKDGSVQNWDDVQVLWEYIRDRYLGEERSAH-VLLTVPPLSPKEDWKKLGSILLESQGVAGVYLANKSALAMYGGGRTTGVCVDSGEDTTYIVPCLEGIPIPGATLVQRLGGKHVTDTLLKQLSNGKYSFIDDTFLLWKRNTSKNANHTAKN--------ARLS-VASRFEV--------------------------------------SVQLCDESLRSRLMSNIALVGGNSLLPGMDERLSKELTALFPSNFPVRVQAQKGREFFSWEGGAHLSSLNSFQELWISRSDFLESG 317
BLAST of cytoplasmic type 5 vs. L. salmonis genes
Match: EMLSAG00000000036 (supercontig:LSalAtl2s:LSalAtl2s1006:32711:34092:-1 gene:EMLSAG00000000036 transcript:EMLSAT00000000036 description:"snap_masked-LSalAtl2s1006-processed-gene-0.20") HSP 1 Score: 121.709 bits (304), Expect = 8.781e-32 Identity = 99/392 (25.26%), Postives = 162/392 (41.33%), Query Frame = 0 Query: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRY--PIEHGIVTNWDDMEKIYHHTFYNEL-RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEM--TTAARSSAITQKYELPD-----------------------GQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIV 371 V+DNG KAGF+ PR V P+ + + + K+ +IG++ R + SL Y P + G +TNWD +KI+ + F V + ++ E N + +E + +I+ T PA +V+D G TH VP G + A LR+D+ G+ LT++L I+ R + E ++ KE C+V+ DF +M T + ++IT+ Y LPD Q + + NERF PE LF P+ DV GGST + + +R+ KE+ P + +++I P W GG+ + F + ++++EF E G + Sbjct: 5 TFVIDNGGYFLKAGFSNQSPPRLV-PNCITKAKS-------EKRKPFIGDQINECRDLSSLYYCLPFQKGYLTNWDTQKKIWDYLFSESCCNVDTRDTNLIFMEPLFNFNSVQEGINEIITNT--DPAH----------------ACLVLDIGYSFTHIVPYIHGLRIKEATLRIDVGGKLLTNHLKEIVSYRQLHVLD--ETYVMNACKEDCCFVSLDFHADMNETLKHKGNSITRDYILPDFHNLRRGVMKSLEKSTGRPKDENEQFVRMNNERFTVPEILFNPS--------------------DV-------------GGSTKFSNMRERVEKEIREWIPDLIDVQVIHPQNPITYSWEGGAAFSEDPCFLKTCVSRKEFLERGHSVC 335
BLAST of cytoplasmic type 5 vs. L. salmonis genes
Match: EMLSAG00000002538 (supercontig:LSalAtl2s:LSalAtl2s14:70836:75333:1 gene:EMLSAG00000002538 transcript:EMLSAT00000002538 description:"maker-LSalAtl2s14-augustus-gene-0.7") HSP 1 Score: 107.457 bits (267), Expect = 1.686e-25 Identity = 93/369 (25.20%), Postives = 176/369 (47.70%), Query Frame = 0 Query: 9 LVVDNGSGMCKAGFAGD--DAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSK--RGILSLRYPIEHG-----IVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTA--EREIVRDIKEKLCYVATDFEDEM-----TTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQ 361 ++VD G +AG A P+ FPS++ + +++ Y G +A + R L +P+ ++ EKI+ ++ P E+ + L+ + ++ ++FE F + ++ + QAV S+YA TGIV+D G+ + +PI +GY + + R + GR+L + + L+ + ++ + ++ + ++R EK YVA +F+ E+ S AI + +G ERF E LF+P G++ GVH V ++ C VD+RK++ +I SGG + PG A+R+ E++ L P ++K K+ A ++ ++G A F M ++++ Sbjct: 989 IIVDFGGASVRAGIASRIPTLPKIFFPSVMA-------VAKDNEREKYFGLDAFAPEVRARCDLFHPMSFDRRTIDLIAFQGMFEKIFKDLGIDD----PAEYELQLSVPRSLDDKTKIAVSSVLFEEFAIRSLNMAHQAVFSMYAYQSKTGIVVDIGERMD-IIPIVDGYKVGSGMSRSPVGGRELRNRTAQYLQVKNHNLSTSSPVDDYVLRAALEKSAYVARNFDRELEIYEDNYDEHSQAIPYGGGG---XELILGXERFEAIEGLFKPELWGLDQAGVHVLVHKAVRECPVDVRKEVTKSIYCSGGLSSVPGFAERLELEMERLTP-NVKPKVHASLYSYHAAYLGAESHALSEGFDDMKMSRE 1341
BLAST of cytoplasmic type 5 vs. L. salmonis genes
Match: EMLSAG00000001328 (supercontig:LSalAtl2s:LSalAtl2s1223:231177:233933:-1 gene:EMLSAG00000001328 transcript:EMLSAT00000001328 description:"maker-LSalAtl2s1223-augustus-gene-2.59") HSP 1 Score: 95.9005 bits (237), Expect = 1.046e-21 Identity = 87/366 (23.77%), Postives = 154/366 (42.08%), Query Frame = 0 Query: 5 EIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVAT----------DFEDEMTTAARSSAITQKYELPDGQIIDV-GNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLA---PSSMKIKI-------IAPPERKYSVWIGGSILAS 349 E A+V+D GS K G+AG+ PR + PS P+ + G D+ + +D+ H ++ L + P++ V++ E+ + R +++F+ F V ++ ++ L+ G +G+V+D G +P+YEG + A + LA + L L ++ + ++ ++ DI + C+VA FE + + +S +T Y + ++I V G+ R E LF+ + + + +SI C +D RK L NIV GG T PG R+ KE+ L P K+KI + P + W+G SI + Sbjct: 441 EKHAVVLDVGSAYTKLGYAGEYQPRKIIPS----PK--NLFKGNKISDNEL------------------------YDEFVSFIHSLYFEHLLINPKDRRVVIVESVIGYARFRNIFARVLFKHFEVLSVLFAPSHLMPLFLLGIRSGLVLDVGYSEAELIPVYEGVPILKAWQALPLASEVVQKSLKNALDDQDDAISSW----VIEDIAVRFCFVANYKRGQEIQNAKFEGKPFQKSIASNLT--YPIKGNKVIQVSGDIRESVCEVLFEQ---DNDRLSIPTMILDSITSCSIDTRKLLAENIVFIGGCTQIPGFKSRVIKEIKDLCETEPHYSKLKIKDNFKVHMTPGGANCAAWLGASIFGA 767
BLAST of cytoplasmic type 5 vs. L. salmonis genes
Match: EMLSAG00000003772 (supercontig:LSalAtl2s:LSalAtl2s203:384038:386282:-1 gene:EMLSAG00000003772 transcript:EMLSAT00000003772 description:"snap-LSalAtl2s203-processed-gene-3.23") HSP 1 Score: 83.9593 bits (206), Expect = 4.650e-20 Identity = 35/40 (87.50%), Postives = 39/40 (97.50%), Query Frame = 0 Query: 334 PERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHR 373 PERKYSVWIGGSI+ASLSTFQQMWI+KQE+DE+GP IVHR Sbjct: 8 PERKYSVWIGGSIMASLSTFQQMWISKQEYDESGPSIVHR 47
BLAST of cytoplasmic type 5 vs. L. salmonis genes
Match: EMLSAG00000009419 (supercontig:LSalAtl2s:LSalAtl2s600:263530:266051:-1 gene:EMLSAG00000009419 transcript:EMLSAT00000009419 description:"maker-LSalAtl2s600-augustus-gene-3.31") HSP 1 Score: 57.7658 bits (138), Expect = 2.173e-9 Identity = 30/118 (25.42%), Postives = 57/118 (48.31%), Query Frame = 0 Query: 236 AITQKYELPDGQI----IDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILAS 349 I ++ E+P + + + ER R PE LFQP+ +G E G+ ET+ + + D +++ L +NI ++G + PGI +R+ ++ + P K + W G + + Sbjct: 439 GIPEEQEIPTDSLEWYQLHLSTERIRAPEILFQPSIIGHEQGGISETLEFILSKFDPELQGKLVNNIFVTGSLALLPGIKERLENDIMAMRPFQSKFNVSVAKCPSLDSWYGARKMVT 556 HSP 2 Score: 56.6102 bits (135), Expect = 5.317e-9 Identity = 37/177 (20.90%), Postives = 83/177 (46.89%), Query Frame = 0 Query: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGIL--SLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEE---HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTT--GIVMDSGDGVTHTVPIYEGYSLPHAI 176 +A+++DNGS C+ G++ P ++ ++V R R + + IG + S + +L+ P + +VT + E + + F + L + +E HPV+++ +NP ++ M +++FE ++VP + + + S + + +++ H +P G H + Sbjct: 32 SAIIIDNGSYNCRMGWSTSPEPELIYRNVVARSRKEKS----KEAELQIGNDISSGETLRGGTLKSPFDRNVVTQFQTQEMLLDYGFAH-LGINSQESVPHPVVISHPIMNPNLSQNLMNELLFECYSVPKVAYFVDXLTSYHQNKDLAQDALIVSLSHHTMHFIPWISGKIAGHGL 203
BLAST of cytoplasmic type 5 vs. SwissProt
Match: gi|82213656|sp|Q8JJB8.1|ACTG_TRISC (RecName: Full=Actin, cytoplasmic 2; AltName: Full=Gamma-actin; Contains: RecName: Full=Actin, cytoplasmic 2, N-terminally processed) HSP 1 Score: 707.597 bits (1825), Expect = 0.000e+0 Identity = 328/371 (88.41%), Postives = 353/371 (95.15%), Query Frame = 0 Query: 3 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHR 373 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHR Sbjct: 2 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 372
BLAST of cytoplasmic type 5 vs. SwissProt
Match: gi|1703123|sp|P53505.1|ACT5_XENLA (RecName: Full=Actin, cytoplasmic type 5) HSP 1 Score: 706.827 bits (1823), Expect = 0.000e+0 Identity = 327/373 (87.67%), Postives = 354/373 (94.91%), Query Frame = 0 Query: 1 MYDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHR 373 M D+EIAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHR Sbjct: 1 MADEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 373
BLAST of cytoplasmic type 5 vs. SwissProt
Match: gi|42560193|sp|P83750.1|ACTB_CYPCA (RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-actin; Contains: RecName: Full=Actin, cytoplasmic 1, N-terminally processed >gi|42560194|sp|P83751.1|ACTB_CTEID RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-actin; Contains: RecName: Full=Actin, cytoplasmic 1, N-terminally processed >gi|92087016|sp|Q7ZVF9.2|ACTB2_DANRE RecName: Full=Actin, cytoplasmic 2; AltName: Full=Beta-actin-2; Contains: RecName: Full=Actin, cytoplasmic 2, N-terminally processed) HSP 1 Score: 706.827 bits (1823), Expect = 0.000e+0 Identity = 328/371 (88.41%), Postives = 353/371 (95.15%), Query Frame = 0 Query: 3 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHR 373 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHR Sbjct: 2 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 372
BLAST of cytoplasmic type 5 vs. SwissProt
Match: gi|1703121|sp|P53478.1|ACT5_CHICK (RecName: Full=Actin, cytoplasmic type 5) HSP 1 Score: 706.057 bits (1821), Expect = 0.000e+0 Identity = 327/373 (87.67%), Postives = 354/373 (94.91%), Query Frame = 0 Query: 1 MYDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHR 373 M D+EIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEA+FQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHR Sbjct: 1 MADEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAIFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 373
BLAST of cytoplasmic type 5 vs. SwissProt
Match: gi|46397316|sp|P60711.1|ACTB_RAT (RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-actin; Contains: RecName: Full=Actin, cytoplasmic 1, N-terminally processed >gi|46397330|sp|P60706.1|ACTB_CHICK RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-actin; Contains: RecName: Full=Actin, cytoplasmic 1, N-terminally processed >gi|46397331|sp|P60707.1|ACTB_TRIVU RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-actin; Contains: RecName: Full=Actin, cytoplasmic 1, N-terminally processed >gi|46397332|sp|P60708.1|ACTB_HORSE RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-actin; Contains: RecName: Full=Actin, cytoplasmic 1, N-terminally processed >gi|46397333|sp|P60709.1|ACTB_HUMAN RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-actin; Contains: RecName: Full=Actin, cytoplasmic 1, N-terminally processed >gi|46397334|sp|P60710.1|ACTB_MOUSE RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-actin; Contains: RecName: Full=Actin, cytoplasmic 1, N-terminally processed >gi|46397335|sp|P60712.1|ACTB_BOVIN RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-actin; Contains: RecName: Full=Actin, cytoplasmic 1, N-terminally processed >gi|46397336|sp|P60713.1|ACTB_SHEEP RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-actin; Contains: RecName: Full=Actin, cytoplasmic 1, N-terminally processed >gi|52000708|sp|Q76N69.1|ACTB_CHLAE RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-actin; Contains: RecName: Full=Actin, cytoplasmic 1, N-terminally processed >gi|54035704|sp|Q711N9.1|ACTB_MESAU RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-actin; Contains: RecName: Full=Actin, cytoplasmic 1, N-terminally processed >gi|54035705|sp|Q71FK5.1|ACTB_CAVPO RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-actin; Contains: RecName: Full=Actin, cytoplasmic 1, N-terminally processed >gi|67462114|sp|Q5R1X3.1|ACTB_PANTR RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-actin; Contains: RecName: Full=Actin, cytoplasmic 1, N-terminally processed >gi|75061693|sp|Q5R6G0.1|ACTB_PONAB RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-actin; Contains: RecName: Full=Actin, cytoplasmic 1, N-terminally processed >gi|75075928|sp|Q4R561.1|ACTB_MACFA RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-actin; Contains: RecName: Full=Actin, cytoplasmic 1, N-terminally processed >gi|115503783|sp|Q4L0Y2.1|ACTB_SPECI RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-actin; Contains: RecName: Full=Actin, cytoplasmic 1, N-terminally processed >gi|150438831|sp|Q6QAQ1.2|ACTB_PIG RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-actin; Contains: RecName: Full=Actin, cytoplasmic 1, N-terminally processed >gi|160332358|sp|O18840.3|ACTB_CANFA RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-actin; Contains: RecName: Full=Actin, cytoplasmic 1, N-terminally processed) HSP 1 Score: 706.057 bits (1821), Expect = 0.000e+0 Identity = 327/371 (88.14%), Postives = 353/371 (95.15%), Query Frame = 0 Query: 3 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHR 373 DD+IAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHR Sbjct: 2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 372
BLAST of cytoplasmic type 5 vs. SwissProt
Match: gi|82202372|sp|Q6P378.1|ACTG_XENTR (RecName: Full=Actin, cytoplasmic 2; AltName: Full=Actin, cytoplasmic, type 5; AltName: Full=Gamma-actin; Contains: RecName: Full=Actin, cytoplasmic 2, N-terminally processed) HSP 1 Score: 706.057 bits (1821), Expect = 0.000e+0 Identity = 327/371 (88.14%), Postives = 353/371 (95.15%), Query Frame = 0 Query: 3 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHR 373 D+EIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHR Sbjct: 2 DEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 372
BLAST of cytoplasmic type 5 vs. SwissProt
Match: gi|1703111|sp|P53485.1|ACTB2_TAKRU (RecName: Full=Actin, cytoplasmic 2; AltName: Full=Beta-actin B; Contains: RecName: Full=Actin, cytoplasmic 2, N-terminally processed) HSP 1 Score: 705.671 bits (1820), Expect = 0.000e+0 Identity = 327/371 (88.14%), Postives = 353/371 (95.15%), Query Frame = 0 Query: 3 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHR 373 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAP++MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHR Sbjct: 2 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITSLAPTTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 372
BLAST of cytoplasmic type 5 vs. SwissProt
Match: gi|62298523|sp|Q7ZVI7.2|ACTB1_DANRE (RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-actin-1; Contains: RecName: Full=Actin, cytoplasmic 1, N-terminally processed) HSP 1 Score: 705.671 bits (1820), Expect = 0.000e+0 Identity = 327/371 (88.14%), Postives = 353/371 (95.15%), Query Frame = 0 Query: 3 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHR 373 D+EIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHR Sbjct: 2 DEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 372
BLAST of cytoplasmic type 5 vs. SwissProt
Match: gi|82195535|sp|Q5JAK2.1|ACTG_PELLE (RecName: Full=Actin, cytoplasmic 2; AltName: Full=Cytoplasmic actin type 5; AltName: Full=Gamma-actin; Contains: RecName: Full=Actin, cytoplasmic 2, N-terminally processed) HSP 1 Score: 705.671 bits (1820), Expect = 0.000e+0 Identity = 326/371 (87.87%), Postives = 353/371 (95.15%), Query Frame = 0 Query: 3 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHR 373 D+EIAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHR Sbjct: 2 DEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 372
BLAST of cytoplasmic type 5 vs. SwissProt
Match: gi|1351867|sp|P48975.1|ACTB_CRIGR (RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-actin; Contains: RecName: Full=Actin, cytoplasmic 1, N-terminally processed) HSP 1 Score: 704.516 bits (1817), Expect = 0.000e+0 Identity = 326/371 (87.87%), Postives = 353/371 (95.15%), Query Frame = 0 Query: 3 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHR 373 DD+IAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQ+MWI+KQE+DE+GP IVHR Sbjct: 2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQEMWISKQEYDESGPSIVHR 372
BLAST of cytoplasmic type 5 vs. nr
Match: gi|327288208|ref|XP_003228820.1| (PREDICTED: actin, cytoplasmic type 5 [Anolis carolinensis]) HSP 1 Score: 708.753 bits (1828), Expect = 0.000e+0 Identity = 329/373 (88.20%), Postives = 354/373 (94.91%), Query Frame = 0 Query: 1 MYDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHR 373 M DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEA+FQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGGSTMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHR Sbjct: 1 MADDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAVFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 373
BLAST of cytoplasmic type 5 vs. nr
Match: gi|938060553|gb|KPP63191.1| (Actin, cytoplasmic 2-like [Scleropages formosus]) HSP 1 Score: 708.368 bits (1827), Expect = 0.000e+0 Identity = 327/371 (88.14%), Postives = 353/371 (95.15%), Query Frame = 0 Query: 3 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHR 373 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPV LTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM+TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHR Sbjct: 28 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVXLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMSTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 398
BLAST of cytoplasmic type 5 vs. nr
Match: gi|1083269293|ref|XP_018595388.1| (PREDICTED: actin, cytoplasmic 2 [Scleropages formosus]) HSP 1 Score: 707.983 bits (1826), Expect = 0.000e+0 Identity = 328/371 (88.41%), Postives = 354/371 (95.42%), Query Frame = 0 Query: 3 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHR 373 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM+TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHR Sbjct: 2 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMSTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 372
BLAST of cytoplasmic type 5 vs. nr
Match: gi|700387978|ref|XP_009934170.1| (PREDICTED: actin, cytoplasmic type 5 isoform X1 [Opisthocomus hoazin] >gi|677551489|gb|KFR11729.1| Actin, cytoplasmic type 5 [Opisthocomus hoazin]) HSP 1 Score: 707.983 bits (1826), Expect = 0.000e+0 Identity = 328/373 (87.94%), Postives = 355/373 (95.17%), Query Frame = 0 Query: 1 MYDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHR 373 M D+EIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EMTTAA SS++ + YELPDGQ+I +GNERFRCPEA+FQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHR Sbjct: 1 MADEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEAIFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 373
BLAST of cytoplasmic type 5 vs. nr
Match: gi|706122744|ref|XP_010196911.1| (PREDICTED: actin, cytoplasmic type 5 isoform X1 [Colius striatus] >gi|677062173|gb|KFP24955.1| Actin, cytoplasmic type 5 [Colius striatus]) HSP 1 Score: 707.983 bits (1826), Expect = 0.000e+0 Identity = 328/373 (87.94%), Postives = 354/373 (94.91%), Query Frame = 0 Query: 1 MYDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHR 373 M DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEA+FQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHR Sbjct: 1 MADDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAIFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 373
BLAST of cytoplasmic type 5 vs. nr
Match: gi|1160114458|ref|XP_020366648.1| (actin, cytoplasmic type 5 isoform X2 [Rhincodon typus] >gi|1160114460|ref|XP_020366650.1| actin, cytoplasmic type 5 isoform X2 [Rhincodon typus] >gi|1160114462|ref|XP_020366651.1| actin, cytoplasmic type 5 isoform X2 [Rhincodon typus]) HSP 1 Score: 707.597 bits (1825), Expect = 0.000e+0 Identity = 328/373 (87.94%), Postives = 354/373 (94.91%), Query Frame = 0 Query: 1 MYDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHR 373 M DDEIAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHR Sbjct: 1 MADDEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 373
BLAST of cytoplasmic type 5 vs. nr
Match: gi|556965732|ref|XP_005992382.1| (PREDICTED: actin, cytoplasmic 1 [Latimeria chalumnae]) HSP 1 Score: 707.597 bits (1825), Expect = 0.000e+0 Identity = 328/373 (87.94%), Postives = 354/373 (94.91%), Query Frame = 0 Query: 1 MYDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHR 373 M +DEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHR Sbjct: 1 MMEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 373
BLAST of cytoplasmic type 5 vs. nr
Match: gi|82213656|sp|Q8JJB8.1|ACTG_TRISC (RecName: Full=Actin, cytoplasmic 2; AltName: Full=Gamma-actin; Contains: RecName: Full=Actin, cytoplasmic 2, N-terminally processed >gi|20429219|dbj|BAB91355.1| beta actin [Triakis scyllium] >gi|189099631|gb|ACD76987.1| beta actin [Leucoraja erinacea]) HSP 1 Score: 707.597 bits (1825), Expect = 0.000e+0 Identity = 328/371 (88.41%), Postives = 353/371 (95.15%), Query Frame = 0 Query: 3 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHR 373 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHR Sbjct: 2 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 372
BLAST of cytoplasmic type 5 vs. nr
Match: gi|1227483394|pdb|5NW4|V (Chain V, Human Cytoplasmic Dynein-1 Bound To Dynactin And An N-terminal Construct Of Bicd2) HSP 1 Score: 707.212 bits (1824), Expect = 0.000e+0 Identity = 328/373 (87.94%), Postives = 354/373 (94.91%), Query Frame = 0 Query: 1 MYDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHR 373 M D+EIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHR Sbjct: 21 MGDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 393
BLAST of cytoplasmic type 5 vs. nr
Match: gi|1104475880|gb|APD32913.1| (Acta1 [Castor fiber]) HSP 1 Score: 707.212 bits (1824), Expect = 0.000e+0 Identity = 328/371 (88.41%), Postives = 353/371 (95.15%), Query Frame = 0 Query: 3 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHR 373 DD+IAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DEAGP IVHR Sbjct: 2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIVHR 372 The following BLAST results are available for this feature:
BLAST of cytoplasmic type 5 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 17
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BLAST of cytoplasmic type 5 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of cytoplasmic type 5 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold23_size669530:952..2070- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold23_size669530-processed-gene-0.3 ID=snap_masked-scaffold23_size669530-processed-gene-0.3|Name=cytoplasmic type 5|organism=Tigriopus kingsejongensis|type=gene|length=1119bp|location=Sequence derived from alignment at scaffold23_size669530:952..2070- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'cytoplasmic type 5' has the following synonyms
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