abc transporter atp-binding protein, snap_masked-scaffold2503_size14991-processed-gene-0.2 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000007660 (supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 gene:EMLSAG00000007660 transcript:EMLSAT00000007660 description:"maker-LSalAtl2s445-augustus-gene-0.18") HSP 1 Score: 276.174 bits (705), Expect = 6.808e-85 Identity = 175/485 (36.08%), Postives = 270/485 (55.67%), Query Frame = 0 Query: 64 DIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGT---GGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLA-KPVQGAVNFSKVTFAYD--PDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGG-SITIDGEELNTLAKDSLRES-IGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADL 540 +R DL+ I + +FD +TG+I++R+ DV + I GL S Q + MY+ + ++ + +P + LG R K + + A+ + I+ IR ++ +A E E ++R + R L V+ + +F +VLGT GG + D +L G+L F + + ++++ L + A+ R+FE ++ S G ++ G V F +TF+Y P+Q +LKD SL P +T+AL G++G GK+TI LL RFY+ +GG S+ IDG + L LR S IGY+ QE LF +V EN+ NA+D ++++A +AA DFVR P T +GERGV +SGG+KQR++IARALLK+PPIL+LDEAT+++D ++E ++Q+ALD+L K RTS+VIAHRLSTI+NAD I V++KG + E GT+ L K G ++ L Sbjct: 187 SLRKDLFNSIICQDIAFFDEHKTGEIVSRLSADVQEFKSSFKLVISQGLRSSAQASGCIVSMYMISPQMTSAMGVIVPTVILGGTYIGSYLRVLSKKAQAQVAKATAVGEECISNIRTVRGFAMEDAEMELYSREVDKTRDFNEALGLGIGVFQGASNFFL---NSIVLGTITYGGYLMSDDNLNPGQLMSFLVSVQTIQRSITQVSLLFGHLVKGMASGSRIFEYIEKVPLIPISGGVKIPYHSFFGDVEFKNITFSYPTRPEQAVLKDFSLRIPPSKTVALVGTSGGGKTTIAALLERFYDINGGGSLEIDGINIRDLDPSWLRGSAIGYINQEPVLFATSVIENIRYGRPNATDNEVYEAAKAAHVDDFVRTFPDGYSTILGERGVTVSGGQKQRIAIARALLKNPPILILDEATSALDAESERIVQEALDKLSKGRTSLVIAHRLSTIKNADVIAVIDKGVMAEIGTHAALKRKGGIYSRL 668
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000003104 (supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-1 gene:EMLSAG00000003104 transcript:EMLSAT00000003104 description:"maker-LSalAtl2s174-augustus-gene-3.18") HSP 1 Score: 223.402 bits (568), Expect = 1.655e-63 Identity = 129/362 (35.64%), Postives = 206/362 (56.91%), Query Frame = 0 Query: 174 DNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQ----GAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELL 531 D++ +K + EA E +++ + T +L+ + ++ + + + V ++ + +G LT G+L LL P++ L + + S +F+++ + + +S G + ++ F V F Y+ D+ I +S + G+TIA+ G +G+GKST+V LL RFYE GSI I +N + DSLR I V Q+ LFN T+ N+ + N SDED++K + A + +R+ P+ T VGERG+KLSGGEKQR++IARA LKD PI++ DEAT+S+D+ TE +I +AL + +T+I+IAHRLST+ +AD I+VL G+VIE GT++ELL Sbjct: 225 DSLINYETVKYFNNEAYECQQYDKSLLKYETASLKTTESLSLLNFGQNAIFSVALSAIMMMAAKDISNGALTVGDLIMVNGLLFQLSLPLNFLGSVYREIRQSLIDMQVMFQLMATPSKITSSKGATEINFINNMEDASITFDDVKFGYNIDKNIANGLSFSVESGKTIAIVGESGSGKSTLVRLLYRFYEPQLGSIKIGNYNINEVTLDSLRRQISIVPQDCVLFNDTIFHNIKYGNLNCSDEDVYKVAKLAEIDNAIRSWPQGYLTQVGERGLKLSGGEKQRVAIARAALKDSPIIIFDEATSSLDSITETMIMKALKRVTSGKTAIIIAHRLSTVVHADEIFVLSNGKVIERGTHEELL 586
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000010048 (supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1 gene:EMLSAG00000010048 transcript:EMLSAT00000010048 description:"snap_masked-LSalAtl2s662-processed-gene-1.13") HSP 1 Score: 219.164 bits (557), Expect = 5.690e-63 Identity = 119/278 (42.81%), Postives = 179/278 (64.39%), Query Frame = 0 Query: 276 SRAAADRVFEILDSEDEPDASDGTRL------AKPVQGAVNFSKVTFAYDPDQP---ILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWK-ALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLA-KDGQFADLAN 542 +R AA VF+I+ S SD L A P G + F V F Y P +P +L +S +A PG+T+AL G +G GKST++ L+ RFY+ G ++IDGE++ TL LR IG V QE LF +++EN+ + + E + +AA A DF++ LPK+ +T VGE+G LSGG+KQR++IARAL+++P ILLLDEA++++D+Q+E ++Q ALD+ K RT+I++AHRLSTI++AD I V++ G ++ GT++ L + K G + L N Sbjct: 207 ARGAASSVFQIIQSTPAIK-SDYDHLQRQQDKAPPFTGRITFKNVHFEY-PSRPTVKVLSGLSFEASPGKTLALVGPSGCGKSTVIQLIQRFYDPSFGVVSIDGEDITTLDPHWLRSHIGIVGQEPVLFEYSIKENITMGLQGEISEKMIDDTCKAANAYDFIQRLPKKYDTIVGEKGALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSEFIVQSALDKARKGRTTIIVAHRLSTIRSADAILVMKDGYRVDYGTHESLKSNKTGLYCSLVN 482
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000003611 (supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 gene:EMLSAG00000003611 transcript:EMLSAT00000003611 description:"augustus_masked-LSalAtl2s197-processed-gene-0.4") HSP 1 Score: 198.364 bits (503), Expect = 1.225e-54 Identity = 148/487 (30.39%), Postives = 247/487 (50.72%), Query Frame = 0 Query: 65 IRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQ-IGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEAD---EHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEI--LDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQP-ILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNA-SDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDEL-LAKDGQFADLAN 542 I + Y +I R P+ +FD+ G I+ R +D++ + +L I L L +G V L++ + + + F+ + IY +R + Q + S + + +++ G+ I+AY A++ E +N + R ++ +W A+ ++ L + G ++ T V G + G + + L+L+ ++ L + ++ A +R+ E LD E E T P QG V F + Y + +LK I+ G+ + + G TGAGKS++ L R E G I IDG++++TL LRES+ + QE LF+GT+R NL NA SD D+W L + +++R L L ++ E G+ LS G++Q + +ARALL+ IL+LDEATA+VD +T+ IQ+ + + T + IAHRL TI + D+I VL+KG VIE G+ +EL + D F + N Sbjct: 915 IHNQTYDRIMRAPISFFDSTPQGRILNRFSKDISICDNILGSNIRQWLXCLFXFLGIVILIVSVLPLFLLFALPTSLVFILIQN-IYVASSRQLKRLQSVTRSPIYSHFSESLNGLSSIRAYGAQSKFILESINKIDTNQRCNYPSIIANRWLAMRLETIGNLCIFGXAILTMTNPELVGPGKV--GLVISYALILT---QNLNWLXRQTSEIETNIVAVERLKEYAGLDIEKEWRLHKDTSYNWPSQGKVEFKNYSLRYKANSDLVLKKINFTIFGGERVGIVGRTGAGKSSLSVALFRIVEAANGQILIDGKDISTLGLHDLRESLTVIPQEPLLFSGTLRSNL--DPENAFSDHDIWNTLGSVHLKEYIRDLKDGLNHSISEGGLNLSSGQRQLMCLARALLRSCKILILDEATAAVDWETDEKIQETIRCYFPSCTILTIAHRLKTIIDYDKILVLDKGTVIEFGSPNELYMNSDSVFHSMIN 1393 HSP 2 Score: 125.946 bits (315), Expect = 1.618e-30 Identity = 129/511 (25.24%), Postives = 242/511 (47.36%), Query Frame = 0 Query: 51 ILLNNHFEQSVIFDIR------SDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMY-LTNWEVA-----LWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFL-GMVGYVLVLGTGGMAVMDGD---LTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSED-EPDASDGTRLA---KPVQG-AVNFSKVTFAYDPD--QPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLW-KALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQT-ELLIQQALDE---LMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAK 533 +LL +FE + +R S +YRK +L + G+I+ + DV+ + L+ + L S QI + MY W + L T+P+ I S+ + Q + + +L++ + GIR +K YA E N++ G +R + ++K A + M F+ +++ L + VM D LT + F ++ P++ + A+S+ + R+ ++L S++ + DA + + K QG A+ F + + + L +I+L K G A+ G+ G+GKS++++ I GE + K ++ I YV QE+++ N +++ N++ DE+ + + LE + LP ET +GERG+ LSGG++QR+S+ARA+ D + + D +++D+Q + + L+ ++K++T +++ H +S + + I V+ KG++I EGTY ELL K Sbjct: 285 VLLAKYFEIVFLVSMRIRASLTSLVYRKCLKLSNSSRKNKSVGEIVNIMSVDVSRIAD-LMPFLTLLWSSPFQIVVSVIFMYNELGWAIIGGTGILLITIPV------NAILSYFGKKFQMKQMKAKDNRTKILNEVLGGIRILKLYAWEPSY---INKIEG-IRGVEIGILKKAAWLTSFMGFIWSSTPFIVALASFATFVMVDDRNILTAEKAFVTQSYINKMKMPMAXFPFVIVXAISATVSLKRINQLLTSDELQKDAVERVPMKINQKIDQGDAIVIRDGNFKWSTEDSENTLSNINLRIKHGSLTAIVGTVGSGKSSLIS-------------AILGEMVKKSGKVRIKGQIAYVPQESWMQNTSLKNNILFG--KPYDEEWYNQVLEYCCLTYDLSLLPAGDETEIGERGINLSGGQRQRISLARAIYSDADVYIFDNPLSALDSQVGKSVFNNVLNNNTGIIKDKTRLLVTHGISYLPHVHHIAVMLKGEIIHEGTYQELLEK 769
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000004490 (supercontig:LSalAtl2s:LSalAtl2s2344:77714:79426:-1 gene:EMLSAG00000004490 transcript:EMLSAT00000004490 description:"maker-LSalAtl2s2344-augustus-gene-0.12") HSP 1 Score: 173.326 bits (438), Expect = 2.542e-48 Identity = 129/433 (29.79%), Postives = 214/433 (49.42%), Query Frame = 0 Query: 47 NCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGT---GGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYD--PDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASD-EDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEAT 473 N R+ L Q + IRS L+ I + +FDT +TG+++ R+ D + + L I G+ S I A +M + ++AL +P +A A ++ +++ +D L + IA IR ++A+ E E + ++ ++ + +K + + G G +++L GG V +T G L F L ++ + + + AA R++EI+D G L P+ G + F KV F+Y PD I ++L+ + Q +A+ GS KST+ +LL R Y+ + G + IDG ++ L LR IG V QE LF+GT++EN++ + E++ A + + A DF+ P + +T VGERGV LSGG+KQR++IA A+LK+P L+LDEAT Sbjct: 51 NFGRVYLIQLSGQRITARIRSRLFSSITKQETAFFDTNKTGELVNRLSSDSMLVSQALTSQISSGMRSSIMALAGGGMMLFMSPQLALVGLSVVPPVAGWAVWMGKKVKNISHEYQNTLADATHLAQERIANIRTVRAFGKEVQESMAYDE---KMSLVLDKGVKEALIQAKFYGMTGXTGNLIILSVMFYGGFLVTQDVITVGNLTSFILYSGYVGIGLNGVSSFYAEIMKALGAATRIWEIMDRTTHMPLDTGLILPMPLNGHITFEKVGFSYPSRPDHSIFDGLNLNIESKQILAIVGS----KSTLTSLLLRLYDPNMGRVCIDGTDIRELNTTWLRNQIGIVMQEPVLFSGTIKENILYGTEGKIEHEEIVSAAKESNAHDFIMNFPDRYDTLVGERGVLLSGGQKQRVAIAXAILKNPQXLILDEAT 476
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000002221 (supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 gene:EMLSAG00000002221 transcript:EMLSAT00000002221 description:"maker-LSalAtl2s1420-augustus-gene-0.12") HSP 1 Score: 173.711 bits (439), Expect = 2.789e-46 Identity = 146/494 (29.55%), Postives = 253/494 (51.21%), Query Frame = 0 Query: 65 IRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYA------AEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYD--PVSKLHQLNQMAL---SSRAAADRVFEILDSEDE-PDASDGTRLAK--PVQGAVNFSKVTFAYDPD-QPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLA-KDGQFADLAN 542 + + + I + P+ +FDT G I+ R+ +D+ ++ V+ + + + + + +V+ +T + A+L I IY +R + + S S + + + ++G I+AY +E++ V+ N+ + T + R W AV L +VG ++V +AV L R L + LS+ Y + L+ L +MA ++ A +R+ E +E E P + T+ + P +G ++F + Y +LK++SLD + G+ I + G TGAGKS+ + R E G+I IDG ++ L LR I + Q+ LF+G++R NL D ++ ++ +A+ + F+ +L LE +V E G LS G++Q + +ARALL+ +L+LDEATA+VD +T+ LIQ+ + K+ T I IAHRL+TI + +I VL+ G+ +E GT ELLA K QF + + Sbjct: 1075 LHNQMLESILKSPMSFFDTTPQGRILNRLGKDLDVLDSVMPMVLRGWISCFLGVLSSLIVVMVTTPVFIIPASLIIICYFFIQRIYVATSRQLKRLESSSRSPIXSFFSETVSGAATIRAYGQSSTFISESESKVDDNQKANFPATVSNR---WLAVR------LEVVGNLIVFTAALLAV----LGRDSLSPGLVGLSVSYALAVTASLNWLVRMASEVETNIVAVERIQEYTKAEKEAPWIIEDTKPDEDWPRKGEISFKNYSTRYREGLDYVLKNVSLDIEGGEKIGIVGRTGAGKSSFTLSMFRIIEPVTGNIIIDGVDITKLGLHQLRSRITIIPQDPVLFSGSLRRNLDPLDE-YNETNIMEAISHSHLKPFIDSLKDGLEYHVSEGGENLSLGQRQLICLARALLRRTRVLILDEATAAVDLETDNLIQKTIRSEFKDSTVITIAHRLNTIMDYSKILVLKNGERVEYGTVAELLADKKSQFYSMCS 1554 HSP 2 Score: 137.117 bits (344), Expect = 4.091e-34 Identity = 135/528 (25.57%), Postives = 245/528 (46.40%), Query Frame = 0 Query: 34 ALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLA----------LGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLV----LGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPV-QGAVNFSKVTFAY--DPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQAL----DELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADL 540 +L L FF K + ++I + S+I S +YRK R+P TG+I+ + D + L+ I + QI + +YL LW TL LA FI S + Q + LL++ + GI+ +K YA E +F + +R+ ++++ SF+ LV T ++ + L + F L ++ P+S L + + + + R+ + ++SE+ + + + A P + A+N K + D D+ IL D+SLD + G +A+ G+ G+GKS++++ + + G IT+ G SI Y Q+A++ N +++ N +L +++ + + +EA + LP ET +GE+G+ LSGG+KQR+S+ARA+ I LLD+ ++VD+ I + ++K++T +++ H ++ + D+I V++ G+V E GTY ELL + G FA+ Sbjct: 371 SLVLSKFFYKMYVVGMKI------KTSLI----STIYRKALRVPTSTKKNISTGEIVNLMSVDAQKIVD-LMPYINTVWSAPFQI---TIAIYL------LWQTLGPSVLAGVLVMILLIPFNGFIASR-TKTLQTNQMKEKDERIKLLNEVVQGIKIVKLYAWEQ----SFLDIISNVRSKEVKILTHIGYLQAGNSFIWTCAPFLVSLVTFATFILSSPENVLDSEKAFVCLTLFNILRFPLSMLPMIIGSMVLAGVSIKRINKFMNSEEIDEEAVEKKTAYPDDKFAINLEKACLKWESDEDKNILSDVSLDIEVGSLVAVVGTVGSGKSSLLSAILGEMDKVSGLITVRG-------------SIAYGAQQAWVLNTSLKNN-ILFNKSYDGDKYTRIVEACALKSDLDMLPGGDETEIGEKGINLSGGQKQRVSLARAVYSGSDIYLLDDPLSAVDSHVGKHIYDNVISSSSGILKDKTRVMVTHGVTYLPFTDKIIVMKDGRVSEIGTYKELLRQKGAFAEF 859
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000001655 (supercontig:LSalAtl2s:LSalAtl2s128:1836948:1854487:1 gene:EMLSAG00000001655 transcript:EMLSAT00000001655 description:"augustus_masked-LSalAtl2s128-processed-gene-18.4") HSP 1 Score: 172.555 bits (436), Expect = 6.194e-46 Identity = 133/491 (27.09%), Postives = 234/491 (47.66%), Query Frame = 0 Query: 75 RLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQI-GAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRD-------SASDLNALLHDNIAGIRQIKAYAA------EADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALS------SRAAADRVFEILDSEDEPDASDGTRLAK--PVQGAVNFSKVTFAYDPDQP-ILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQ-LETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELL-AKDGQFADL 540 R + +FD+ G I+ R D A++ L + + L + + G V + +Y W + I L LG F Y + R G RD S S + ++ + G++ I+A A E +E V N+ + R W + L ++G ++V ++V++ + L + +L +L ++ +S A +R ++ +D E S + P QG V F + Y P +L ++ KP + I + G TGAGKS+++ L R + G I +DG + L R + Q+ F+F+GT+R+NL ++ SD++LW +++ + + + + L+T +G+ G LS G+KQ L +ARA++ ++ +DEATASVD +T+ LI+ L ++T I IAHR+ T+ N+DRI+V+ GQ+IEEG ++L+ + + +F L Sbjct: 984 RAKIYFFDSTPAGRILNRFSSDTYAIDDSLPFILNIFLSQIFGVFGRVLVCVYAVPW-------ILIVLLPLGLFYYEIQCKYR-PGSRDLKRISSVSLSPIYEHFNETVHGLKIIRASKASQRFLLENEELVECNQ---KARYAAFSASLWLEIR------LQLIGSIVVFSIALISVINFESVDAGLVGLAVSYAL-----GMTXRLAEVVVSFTETEKELVAVERAYDYIDRIYEESYSGVLNMPYNWPNQGVVEFKDIRLRYKDHLPYVLNKVNFKTKPKEKIGIVGRTGAGKSSLIAALFRLSSFSHGEIMVDGIRIRLLPLIDFRRQFAVIPQDPFIFSGTIRQNLDPYAQH-SDQELWDSIKLSYLYNIIYSFGSSGLDTLIGDGGKSLSIGQKQLLCLARAIITSAKVVFIDEATASVDKETDRLIRNVLKTAFNDKTVITIAHRIETVLNSDRIFVMSNGQIIEEGKPEDLIKSPNSEFRKL 1451 HSP 2 Score: 83.9593 bits (206), Expect = 4.982e-17 Identity = 80/363 (22.04%), Postives = 160/363 (44.08%), Query Frame = 0 Query: 176 IAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGT--GGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLH-----------QLNQMA-LSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAV---NFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVD-NQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQ 520 I GIR IK Y E+ F + R + +KW +L V++ + + + LT ++F L ++ P + + ++A S + +R+ + +DE T+ +K ++ + + +F + D L++I + K + + + G G+GK+T +N + E G I++ +D L I YV Q ++ N ++R+N++ + + K ++A + L + T GE+G LSGG+K R+++ARA+ +D I L+D+ +S+D N + + + L+K +T I+ H I +A+ + ++ G+ Sbjct: 493 IEGIRVIKYYCWES----FFTDKTNSHRNNEIYYLKWRKYLDAVCVYLWASTPVIISVSTFATYSALGNPLTAAKVFTSMALFAMLSGPFNAFPFVINGLIEANVSIKRLARFLSLPSINRIKYFTEYKDE-----NTKASKEIETKIPDIQIMEASFGFTKDCFTLRNIDVSIKRQEFVGVLGPVGSGKTTFLNAILGELEKQSGKISV---------RDPL-SGIAYVQQVPWIQNKSIRDNILFGEMYIHGK-YTKVIKACCLDHDFKHLHRGDHTIAGEKGAALSGGQKARIALARAIYQDKDIYLIDDVFSSLDVNVGYKVYTEVMLNLLKRKTRILCTHNPQYINDANIVIKIKDGE 835
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000008248 (supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1 gene:EMLSAG00000008248 transcript:EMLSAT00000008248 description:"maker-LSalAtl2s498-snap-gene-2.25") HSP 1 Score: 164.081 bits (414), Expect = 4.965e-43 Identity = 147/493 (29.82%), Postives = 228/493 (46.25%), Query Frame = 0 Query: 65 IRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLV-SLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAE---ADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSR------AAADRV--FEILDSEDEPDASDGTRLAK-PVQGAVNFSKVTFAYDPD-QPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAK-DGQFADLAN 542 I L + R PL +FDT G I+ R +D+ L I + + S +G + ++ W + I + + F Y AR + + S S + + + + GI I+A+ DE+VN + + T+ +W AV L +G +LV+ ++ +RG + LSL Y +S LN + S + +R+ +E + E D + P G + F Y +LK I+ + G+ I + G TGAGKS++ L R E GSI IDGE + L LR I + Q+ LF+G++R NL + A D D+W ALE + FV L L +V E G LS G++Q + +ARA+L+ IL+LDEATA++D +T+ LIQ + K+ T + IAHR++TI +++RI VL+ G + E LLA D F L N Sbjct: 1035 IHGKLLENVLRAPLSFFDTNPLGRILNRFSKDIDVAXTTLPFNIRMMIAQSFNVLGTIVIICIALPWFFVIILPAVICYALIQKF-YISCARQVKRIESISRSPIYSHFAETLTGIPTIRAFGMVHHFIDENVNKIDFNAKCYFPTVISSRWLAVR------LETLGNILVIFVALFSIT----SRGTTDPGMVGLSLSY-ALSVTTILNMLITVSTDVETNMVSVERIKEYENIPQEAPYDLPNSDPPPNWPEHGVIKFDNYKTRYRKGLDLVLKGINCTIQKGEKIGIVGRTGAGKSSLTLALFRIIEPSEGSIYIDGENIRFLGLGKLRSRITIIPQDPILFSGSLRMNLDPFEAFA-DRDIWIALEYSHLKSFVWNLGDGLNFSVLEGGRNLSVGQRQLICLARAILRKTQILVLDEATAAIDLETDDLIQSTIRSEFKDSTVLTIAHRINTIMDSNRIMVLDAGTIAEFDDPQNLLANPDSMFYSLVN 1514 HSP 2 Score: 117.087 bits (292), Expect = 1.413e-27 Identity = 83/278 (29.86%), Postives = 146/278 (52.52%), Query Frame = 0 Query: 273 ALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQG--AVNFSKVTFAYDPDQPI--LKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWK-ALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQT-ELLIQQALDE---LMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAK-DGQFADL 540 A+ S+ + DR+ L+ ED D ++ QG AV V+ +++ D+ + L+DI LD + G +A+ G G+GKS++++ + E GSI +DG+ + Y Q+ +L N T+R N++ R ++ L++ ++A + + LP T +GERG+ LSGG+K R+S+AR + I +LD+ ++VD L + + L+KN+T I + H + D+I V++ G + E GTY +L+ K +G+FA Sbjct: 583 AIQSKVSLDRINLFLNKED----LDLLAISHESQGSHAVKMCNVSLSWETDEGLNTLEDIDLDIEKGSLVAIVGQVGSGKSSLLSGILGEMEIVRGSINVDGQTI-------------YAPQQPWLQNETLRNNILFGKR--FNKKLYRRVIDACALSPDLDMLPAGDLTEIGERGINLSGGQKARVSLARCTXNNGDIYILDDPLSAVDVHVGRHLFENVISSQTGLLKNKTRIFVTHGAIFLPQTDKIIVMKNGVISESGTYRDLIEKENGEFAQF 841
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6") HSP 1 Score: 152.91 bits (385), Expect = 2.914e-39 Identity = 126/487 (25.87%), Postives = 238/487 (48.87%), Query Frame = 0 Query: 65 IRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSA-SDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLM---KWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGD-LTRGEL-------FKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEP--DASDGTRL--AKPVQGAVNFSKVTFAYDPD-QPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNA--SDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLA 532 + L++ I + P+ +FDT G I+ R +D+ ++ + I + A ++ + N + + TL I + I S + + K A S + + + ++GI ++AY+ E + F R + ++ +W + + ++G ++ + +V+ D +T G+L +LS S L ++ A +R+ E + E E + + +L + P++G + ++ Y D +L+DI++ PG I + G TG+GKST+ L R E + G ITIDG ++ + +LR + + Q+ LF+GT+R NL D D +L ++L+ A DF++ L+ + E G +S G++Q + +ARALL+ +L++DEATA+VD++T+ LIQ+A+ + ++ T + IAHRL T+ + +I V++ G +IE + LL+ Sbjct: 1505 LHGTLFQCIIKTPMSFFDTTPLGRILNRFGQDIEVLDTKMSFCIFGSMTGTFAYIATVTIISI-NVPIFIIPTLAIFVVYFVILIVSLSSSRQLKRLSSVATSPIYSHFGETLSGINTVRAYSLEKAFYSEFERRLDEYQKRNFPVIMADRWLGIR------INLIGNFIIFASALFSVLSRDTITPGQLGLNVSSSLAITSILSWVIRMYSDLE-------NNIVAVERIKEYSNKESEAPWELEEDLKLNSSWPLKGEITIKNLSLKYRKDLDWVLRDINVHISPGDKIGIVGRTGSGKSTLALALFRLLEVNSGQITIDGVDIKKMGLHTLRSKLTIIPQDPTLFSGTLRLNL---DPFGLFKDMELIESLKHAYLQDFLKE--DGLDKVIAENGENISLGQRQLICLARALLRKNKVLIMDEATAAVDSETDKLIQKAIKDNFRDSTVLTIAHRLQTVLDYSKIIVIDSGCIIEYDSPKNLLS 1972 HSP 2 Score: 128.257 bits (321), Expect = 3.664e-31 Identity = 128/500 (25.60%), Postives = 237/500 (47.40%), Query Frame = 0 Query: 65 IRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERV--LIDGIELGLVSLIQIGAVALVMYLTNWEV---ALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVY--------SPSMSFLGMVGYVL-VLGTGGMAVMDGDLTRGELFKFFLLLSLF---YDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQG-AVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLA---DRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQT-ELLIQQAL--DELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADL 540 I S +YRK R+ DT +G+I+ + DV + + L++ I G + +I A+ L++ + L L IP A + + K + + +N +L GI+ IK YA E+ +F++L +R ++L+K + Y S + F+ + +++ V+ ++D + K F+ +SLF P++ L + S+ + R+ + L SE+ + + Q ++ S + + KDIS+D G IA+ G G+GKS++++ L G + + N + + S+ Y Q A++ N +V++N++ ++N DE L+A + P T +GE+G+ LSGG+KQR+S+ARA+ I LD+ A VD+ + L ++ + + L++ +T I++ H LS + D IY L+ G++ E+GTY EL+ K+ F++L Sbjct: 904 ITSLIYRKALRIHSTRDDTT-SGEIVNLMSVDVQKIVDLMPLLNTIWSGPLQII--AAIYLLINTLGYSALAGVLVMFLLIPINGFIAVRMKNAQMKQMKKKDERVKKMNEILQ----GIKIIKLYAWES----SFSKLISSIRFEEIKLLKLSSKYFGFMMLTISSTTFFISLFTFIVYVVSDPENHILDSE-------KIFVSISLFNILRFPLNMLTHVIGGIASASVSLKRINKFLASEELEEGILVRSNSHDHQAICIHPSSSFSWKGSSESLFKDISMDVNRGNLIAIIGPVGSGKSSLISALL-------GEMLFTSKGTNPV---EIHGSVAYTPQNAWMQNVSVKDNILFGRKFNKNWYDE----VLKACSLESDMEXFPSGDSTEIGEKGINLSGGQKQRISLARAVYSQSDIYFLDDPLAXVDSHVAKHLFEEVIGSNGLLRGKTRILVTHNLSFLHLVDEIYFLKDGEITEKGTYKELMEKNCDFSEL 1371
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000002016 (supercontig:LSalAtl2s:LSalAtl2s1361:43077:48755:-1 gene:EMLSAG00000002016 transcript:EMLSAT00000002016 description:"augustus_masked-LSalAtl2s1361-processed-gene-0.2") HSP 1 Score: 142.51 bits (358), Expect = 7.270e-36 Identity = 80/223 (35.87%), Postives = 129/223 (57.85%), Query Frame = 0 Query: 315 TFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQF 537 +F Y I + SL+ Q + + G +G+GKST++ + R GSITI+G +N + LR+ + + Q+A LF+GT+R NL + + SDE +W L+ A VR P L+T V E G S G++Q L+I +ALL+ P +++LDE+T+++D E+ + L E ++ T I +AHRLS I +R+ V+ +G+++E+G ELL K F Sbjct: 1657 SFEYRRLPGIQQGFSLEIPYRQKVGICGRSGSGKSTLLMGIVRLSRVLQGSITINGININAIPLSRLRKFVITIPQDAVLFSGTIRSNLD-PENDFSDELIWSTLDKADCGKTVRNFPDGLDTCVTENGDNFSLGQRQELNIVKALLRRPRVVILDESTSALDPNREVALHNTLLEAFEDSTLISVAHRLSNIVEYERVLVMGEGRILEDGNPKELLKKPMGF 1878 HSP 2 Score: 86.2705 bits (212), Expect = 9.657e-18 Identity = 60/220 (27.27%), Postives = 114/220 (51.82%), Query Frame = 0 Query: 315 TFAY-DPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQ--TELLIQQALDELMKNRTSIVI-AHRLSTIQNADRIYVLEKGQVIEEGTYDEL 530 TFA+ + +L+ I+L+ K G + G +G+GK+ +++ L + GS+ K ++ +++ + Q +L N T+++N++L R ++ K + A + LP +T +GERGV LSGG++QRL+IAR L +D +S+D++ + + + L L+K R ++ + RL + AD I L+ G + +GT ++ Sbjct: 734 TFAWPKCETNVLQSINLEIKTGSLTIVIGPSGSGKTALISSLIEEMDRITGSV-----------KWNVPDTVALLGQRPWLLNTTIKDNILLG-RPFKEKRYKKVIAACDLQTDIDLLPHGDDTEIGERGVLLSGGQRQRLAIARCLYSKSYCTFMDAPFSSLDSKITSHVFEEGVLKILLKRRRTVFLTTERLDFLHRADHIVALKDGMIKAQGTIQDV 941
BLAST of abc transporter atp-binding protein vs. SwissProt
Match: gi|81814872|sp|O06967.1|BMRA_BACSU (RecName: Full=Multidrug resistance ABC transporter ATP-binding/permease protein BmrA) HSP 1 Score: 313.923 bits (803), Expect = 9.155e-99 Identity = 194/548 (35.40%), Postives = 318/548 (58.03%), Query Frame = 0 Query: 6 VIFPSIAEHILDIIIPAKNANGDFYMWIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVL---IDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIP-----FLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAK---PVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLA-DRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADLA 541 ++ P + + ++D N +G IAL FF++ GL+ N+ Q +I +R L++K+ +LP+ +FDT +G+ ++RV D ++ ++ I G G++S+I G++ ++++ NW++ L + +P + +G ++S + +D + LL+ + IR +KA AE E+ L +R K ++ P +S + M V V+G GGM V G+LT G L F L L P+ ++ S A +R+ EIL +E+E D G ++ P+Q +V+F Y PDQ ILK++S + G+ A+ G +G GK+T+ LL RFY G+I + E ++T + +S RE IGYV+QE+ L +GT+REN+ +R+ +D ++ KA E A A +F++ LP Q +T VGERG+ LSGG++QR++IARALL++P IL+LDEAT+S+D+Q+E +QQAL+ LM+ RT+IVIAHRLST+ +AD++ +EKG++ GT+ EL+A G + D A Sbjct: 44 LLIPLLTKQLVDGF-SMSNLSGTQIGLIALV---FFVQAGLSAYATYALNYNGQKIISGLRELLWKKLIKLPVSYFDTNASGETVSRVTNDTMVVKELITTHISGFITGIISVI--GSLT-ILFIMNWKLTLLVLVVVPLAALILVPIGRKMFSIS-----RETQDETARFTGLLNQILPEIRLVKASNAEDVEYGRGKMGISSLFKLGVREAKVQSLVGPLISLVLMAALVAVIGYGGMQVSSGELTAGALVAFILYLFQIIMPMGQITTFFTQLQKSIGATERMIEIL-AEEEEDTVTGKQIENAHLPIQ----LDRVSFGYKPDQLILKEVSAVIEAGKVTAIVGPSGGGKTTLFKLLERFYSPTAGTIRLGDEPVDTYSLESWREHIGYVSQESPLMSGTIRENICYGLERDVTDAEIEKAAEMAYALNFIKELPNQFDTEVGERGIMLSGGQRQRIAIARALLRNPSILMLDEATSSLDSQSEKSVQQALEVLMEGRTTIVIAHRLSTVVDADQLLFVEKGEITGRGTHHELMASHGLYRDFA 574
BLAST of abc transporter atp-binding protein vs. SwissProt
Match: gi|122064506|sp|Q1GZI0.1|MSBA_METFK (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 310.457 bits (794), Expect = 1.738e-97 Identity = 186/488 (38.11%), Postives = 292/488 (59.84%), Query Frame = 0 Query: 61 VIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAM----ERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQ--RDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQ-PILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLAD-RNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADL 540 V+ ++R D +R++ LP+ +FD G + +++ D M +V + + +L +G V ++YL +W++ L + P A+ ++ S + R G+ + + ++ ++ + ++G R +K + E+ F +++G+ R +RL ++ + S + L V LV+ AV G + GE F L + PV L LN+ AAA VFE++DS P+ +G +G++ F VT Y Q P L D++ KPG+ IAL G +G GK+T+VNLL RFYE G + IDG ++ ++ SLR+ V+Q+ LFN TV N+ RNAS+ED+ A +AA A DF++ LP L++ +G+RGV+LSGG++QRL+IARA+LK+ PILLLDEAT+++D ++E +Q ALDELM+NRTSIVIAHRLSTI+NADRI V+E+G++IE G+++ELLA DG +A L Sbjct: 103 VVENLRQDTFRRLMSLPVSFFDAVSAGVVTSKLTYDTEQMAGAATKVAMSAVR---DTLTILGMVGYMLYL-DWQLTLIFAVVAP--AMAWYLKSMTPKLRSSGKAVQQTMGEMTKVIEEAVSGQRMVKIFGGGDYEYQRFTKVAGKNRHMQIRLARFSGLNSMVVELLAGVALALVVF---YAV--GKFSAGEFAAFIGALLMLIGPVKTLTSLNEELQVGLAAAHSVFELIDSI--PEVDEGHEEIGRAEGSIVFENVTLQYPSAQRPALLDLNFTVKPGEKIALVGRSGGGKTTLVNLLPRFYEVQQGRVLIDGVDVRNMSLKSLRQQFSLVSQDVILFNDTVFNNIAYGVLRNASEEDVIAAAKAAHAWDFIQQLPNGLQSEIGDRGVRLSGGQRQRLAIARAILKNAPILLLDEATSALDTESERHVQAALDELMQNRTSIVIAHRLSTIENADRIMVMEQGRIIEGGSHEELLALDGHYAKL 577
BLAST of abc transporter atp-binding protein vs. SwissProt
Match: gi|1723607|sp|P54719.1|YFIC_BACSU (RecName: Full=Uncharacterized ABC transporter ATP-binding protein YfiC) HSP 1 Score: 309.686 bits (792), Expect = 4.989e-97 Identity = 177/485 (36.49%), Postives = 293/485 (60.41%), Query Frame = 0 Query: 59 QSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQ-IGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKL-HQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQ-GAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADL 540 Q +F +RS+L+ + LP+ +FD +R G++M+RV D+ + L + L S+I +G +A+++Y++ + IP +A ++ +K Q+ + DLN + ++++G + IKAY+ E F + L+T+ M+ L + + ++ GG+ + G ++ G + F F P++ L +Q N M LS+ A A+RVF++LD ++E + + +P+Q G++ F V+F YD Q LK + GQ+IA G TGAGK+T+ NLL RFYE + G I IDG ++ TL + SLR+++G+V Q++FLF GT+REN+ +ASD+++ A + A A F+ LPK +T + + G +S G+KQ +SIARA+L DP +L+LDEAT+++D TE+ IQ+AL LM+ RTS++IAHRL+TIQ AD+I VL+ G++IE+G++DEL+ + G ++DL Sbjct: 116 QGTVFRMRSELFTHLHELPIPFFDKQRHGELMSRVTNDIENVSSTLNTSVIQILSSVITFVGTIAVMLYMSPLLTLI-TLTIIPVMAASLKWITNRTGKLFKEQQKNLGDLNGYIEESVSGAKVIKAYSREKQITAEFLEKNAALKTSGFWAQTISGFIPKVMNSLNNLSFTMIAAIGGLFALKGWISIGSIVVFAEYSRQFTRPLNDLANQFNTM-LSAIAGAERVFDVLDEKEEREDEKNA-VHQPIQTGSIEFRDVSFGYDKGQQTLKHLQFTVPAGQSIAFVGPTGAGKTTVTNLLARFYEPNDGKILIDGTDIKTLTRASLRKNMGFVLQDSFLFQGTIRENIRYGRLDASDQEVEAAAKTANAHSFIERLPKGYDTVLTQNGSGISQGQKQLISIARAVLADPVLLILDEATSNIDTVTEVNIQEALARLMEGRTSVIIAHRLNTIQRADQIVVLKNGEMIEKGSHDELIRQKGFYSDL 597
BLAST of abc transporter atp-binding protein vs. SwissProt
Match: gi|67468769|sp|Q7NZU6.1|MSBA_CHRVO (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 308.916 bits (790), Expect = 5.955e-97 Identity = 185/551 (33.58%), Postives = 300/551 (54.45%), Query Frame = 0 Query: 1 MAGSVVIFPSIAEHILDIIIPAKNANGD--FYMWIALALGAFFLKDGLNCLRILLNNH----FEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMER----VLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAY-DPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADL 540 MA + + P++A+ +L +I N D MW+ LA+ +L GL +N + ++ +R ++ K+ LP R++D ++G +M+R+ DV + V+ + GL +L +G +M T+W++ L + +P + + R + + + + +L ++I R IK Y + E F+ + +R ++ A + + +L G+ G LT G+ F + + PV ++ ++Q AAA+ VF +D EPD DG +G ++F V+FAY + D P L I L+ +PG+T+AL GS+G+GK+T+ +L+ RFYE G + +DG L + LR I V+Q+ LFN TV N+ +AS E++ +A AA A +F+ LP LET +GE G +LSGG++QRL+IARALLK+ P+L+LDEAT+++D Q+E L+Q AL+ LMKNRT+IVIAHRLSTI+NADRI V+ +G++ E+G + LL + G +A L Sbjct: 33 MAVAALTEPAVAK-LLKPLIDGGFVNKDPQVIMWVPLAIIGIYLIRGLAGF---INEYTASWLTGQLVQRLRQQMFAKLVNLPARYYDEHQSGRLMSRITNDVNQVTEAGFNVITVTVRDGLTALGMLG----LMLTTDWQLTLICLVVMPAVTYCMRLVGQRLRGLARQNQQHMAQMTQVLAESIQCQRAIKVYGGQEREMARFDHTATSVRRNQVKQSAASAANTGVTQLMIACALAAILYFAGLRAQHGGLTAGDFMVFLTAMLGLFAPVKRISSVSQAMQRGLAAAESVFAFIDEPGEPD--DGASALPATRGRLSFDAVSFAYPNVDSPALSGIDLEIQPGETVALVGSSGSGKTTLASLVPRFYEPSAGRLLLDGVPLADIPLRQLRGHIALVSQQVELFNDTVAANIAYGREDASREEIVEAARAANAMEFIEGLPDGLETVIGENGARLSGGQRQRLAIARALLKNAPLLILDEATSALDTQSERLVQAALENLMKNRTTIVIAHRLSTIENADRIVVMHQGRLAEQGRHQALLEQGGLYARL 573
BLAST of abc transporter atp-binding protein vs. SwissProt
Match: gi|54040062|sp|P63398.1|Y1303_MYCBO (RecName: Full=Uncharacterized ABC transporter ATP-binding protein Mb1303c >gi|618798194|sp|P9WQJ2.1|Y1272_MYCTO RecName: Full=Uncharacterized ABC transporter ATP-binding protein MT1310 >gi|618798195|sp|P9WQJ3.1|Y1272_MYCTU RecName: Full=Uncharacterized ABC transporter ATP-binding protein Rv1272c) HSP 1 Score: 308.531 bits (789), Expect = 3.216e-96 Identity = 175/479 (36.53%), Postives = 276/479 (57.62%), Query Frame = 0 Query: 59 QSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQF 537 Q + +R+D+ K+ RLPL +FD ++ G++++RV D+ ++ L I + S++ + AV +M + +AL L +P L + ++ + S LNA L + +G +K + +A F+ L+ + + P+ +F+G +GYV V GG+ V G +T G + F + F P+S+L + S A+A+RVF++LD +E + G V F V FAY P P+++D+SL A+PG T+A+ G TGAGK+T+VNLL RFYE G I IDG ++ ++++ SLR IG V Q+ +L++GT+ EN+ A+ +++ +A AA FV LP +T V G +S GEKQ ++IARA L P +L+LDEAT+SVD +TELLIQ+A+ EL ++RTS +IAHRLSTI++AD I V++ GQ++E G + ELLA+ G + Sbjct: 149 QKTMVRLRTDVEDKVHRLPLSYFDGQQRGELLSRVTNDIDNLQSSLSMTISQLVTSILTMVAVLAMMVSISGLLALITLLTVPLSLLVTRAITRRSQPLFVAHWTSTGRLNAHLEETYSGFTVVKTFGHQAAARERFHELNDDVYQAGFGAQFLSGLVQPATAFIGNLGYVAVAVAGGLQVATGQITLGSIQAFIQYIRQFNMPLSQLAGMYNALQSGVASAERVFDVLDEPEESPEP--EPELPNLTGRVEFEHVNFAYLPGTPVIRDLSLVAEPGSTVAIVGPTGAGKTTLVNLLMRFYEIGSGRILIDGVDIASVSRQSLRSRIGMVLQDTWLYDGTIAENIAYGRPEATTDEIVEAARAAHVDRFVNTLPAGYQTRVSGDGGSISVGEKQLITIARAFLARPQLLILDEATSSVDTRTELLIQRAMRELRRDRTSFIIAHRLSTIRDADHILVVQTGQIVERGNHAELLARRGVY 625
BLAST of abc transporter atp-binding protein vs. SwissProt
Match: gi|46396519|sp|Q9HUG8.1|MSBA_PSEAE (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 303.908 bits (777), Expect = 1.027e-94 Identity = 187/528 (35.42%), Postives = 295/528 (55.87%), Query Frame = 0 Query: 15 ILDIIIPAKNANGDFYMWIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYD-PDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLAD-RNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADL 540 +L I+I A G F LG FFL ++ D+R L+ K+ LP R+FDT +G +++R+ +VT + D I++ + + + + L + NW++ L +P +A+ S R + K + + D+ + + I G R ++++ EA E F S LR+ K AVY+P + + V +++ + + GD + G+L + L P+ +L +++ A A+ +FE LD E D GT + V G + ++F Y D+ +L DIS A+PGQ IAL G +G+GKST+ NL+ RFY+++ G I +DG E+ +LR I VTQ+ LFN +V N+ D A E++ +A +AA A +F+ LP+ +T VGE GV LSGG++QRL+IARALLKD P+L+LDEAT+++D ++E IQ ALDE+MK RT++VIAHRLSTI+ AD I V+++GQ++E G++ ELLA++G +A L Sbjct: 85 LLIILIAAWQGLGSF-------LGNFFLAK------------VSLGLVHDLRVALFNKLLVLPNRYFDTHSSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFLYLLWMNWKLTLVMLAILPVIAVMVTTASRKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEAYEEKRFLDASQSNTDKQLRMTKTGAVYTPMLQLVIYVAMAILMFL--VLWLRGDASAGDLVAYITAAGLLPKPIRQLSEVSSTVQRGVAGAESIFEQLDEAAEED--QGTVEKERVSGRLEVRNLSFRYPGTDKQVLDDISFIAEPGQMIALVGRSGSGKSTLANLVPRFYQHNDGKILLDGVEVEDYRLRNLRRHIALVTQQVTLFNDSVANNIAYGDLAGAPREEIERAAKAANAKEFIDNLPQGFDTEVGENGVLLSGGQRQRLAIARALLKDAPLLILDEATSALDTESERHIQAALDEVMKGRTTLVIAHRLSTIEKADLILVMDQGQIVERGSHAELLAQNGHYARL 589
BLAST of abc transporter atp-binding protein vs. SwissProt
Match: gi|122064498|sp|Q47JR8.1|MSBA_DECAR (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 303.138 bits (775), Expect = 1.258e-94 Identity = 185/541 (34.20%), Postives = 298/541 (55.08%), Query Frame = 0 Query: 7 IFPSIAEHILDIIIPAKNANGDFYMWIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQ-----IGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYD-PDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLA-DRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADL 540 +FP+I + +LD N D+ + +G F ++ L L + +V+ ++R ++ ++ RLP R++ +G +M+R+ DVT + + L SLI+ +G + +++L + ++ +PF+A+ ++S R +GQ++S + +L + I G + +K + ++ E F R +R A SP + F G +++G T G F + + P+ ++ +N AAA+ VF ++D E EPD+ G QG V F VTF Y ++P L +SL +PG+ +AL G +G+GK+T NLL RFY G I +DG L + +SLR++I V+Q+ LFN T+ N+ R+A+ +++ A +AA A +F+ ALP+ L T +GE GVKLSGG++QRL+IARA+LKD PIL+LDEAT+++D ++E +Q ALDELM+ R+++VIAHRLSTI+ ADRI L G EEG++ ELLA DG +A L Sbjct: 41 VFPAIMKSLLDDGFSKANGPWDWLFYPLAIMGIFLVRAIFGFLGDYLMSWVSNNVVAELRQAMFARMVRLPTRYYSDNLSGRLMSRIAYDVTGVAGAATNA----LTSLIKDSLSIVGLLVWLLWLNWQLTLITLSV-VPFIAIVVRVFSKRLRSVARGQQESMGKITQVLQEAIEGHKVVKIFGGQSYEEDRFYESIREQRRLAMRATLASAAQSPLVQFFAASGVAIIMGVALKQASSDQTTVGSFVSFVTAMLMLMAPLKRVTDVNAPIQRGLAAAESVFSLVDEETEPDS--GKEELGRAQGLVEFDGVTFTYPGSERPALDSVSLTVRPGECVALVGPSGSGKTTAANLLPRFYALDAGEIRVDGHALPNIRLNSLRDNIALVSQDVVLFNDTIGANIAYGGKRDATLDEIRAAAKAAHALEFIDALPEGLNTMIGENGVKLSGGQRQRLAIARAILKDAPILILDEATSALDTESERHVQAALDELMRGRSTLVIAHRLSTIERADRIIALAHGHKQEEGSHAELLAHDGLYARL 574
BLAST of abc transporter atp-binding protein vs. SwissProt
Match: gi|33302629|sp|Q9CHL8.2|LMRA_LACLA (RecName: Full=Multidrug resistance ABC transporter ATP-binding and permease protein) HSP 1 Score: 295.434 bits (755), Expect = 1.380e-91 Identity = 169/484 (34.92%), Postives = 280/484 (57.85%), Query Frame = 0 Query: 57 FEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQG-AVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLA-DRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFA 538 F +SV+ ++R+ ++ K+ LP+++FD +TG++ +R+ D T ++ ++ + I S++ + + M W + L + +P + L F + + ++DS ++ + ++++ IR +K+ AE L ++ + + SP M M+ +L G + G ++ G L + L V + + + R+ E+LD E E G L ++G ++ V FAYD + IL+DIS +A+P IA AG +G GKSTI +LL RFY+ G ITIDG+ ++ ++ ++ R IG+V+Q++ + GT+RENL + + +DEDLW+ L+ A A FV +P QL T VGERGVK+SGG++QRL+IARA L++P IL+LDEATAS+D+++E ++Q+ALD LMK RT++VIAHRLSTI +AD+IY +EKGQ+ G ++EL+A +A Sbjct: 99 FGESVVKNLRTRVWDKMIHLPVKYFDEVKTGEMSSRLANDTTQVKNLIANSIPQAFTSILLLVGSIVFMLQMQWRLTLAMIIAVPVVMLIMFPIMTFGQKIGRTRQDSLANFQGIASESLSEIRLVKSSNAEKQASKKAENDVNALYKIGVKEAIFDGLMSPVMMLSMMLMIFGLLAYGIYLISTGVMSLGTLLGMMMYLMNLIGAVPTVATFFTELAKASGSTGRLTELLDEEQEV-LHQGESL--DLEGKTLSARHVDFAYDDSEQILRDISFEAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGEITIDGQPIDNISLENWRSQIGFVSQDSAIMAGTIRENLTYGLEGDYTDEDLWQVLDLAFARSFVENMPDQLNTEVGERGVKISGGQRQRLAIARAFLRNPKILMLDEATASLDSESESMVQKALDSLMKGRTTLVIAHRLSTIVDADKIYFIEKGQITGSGKHNELVATHPLYA 579
BLAST of abc transporter atp-binding protein vs. SwissProt
Match: gi|122064513|sp|Q3KJ31.1|MSBA_PSEPF (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 295.434 bits (755), Expect = 1.706e-91 Identity = 175/498 (35.14%), Postives = 282/498 (56.63%), Query Frame = 0 Query: 53 LNNHFEQSV----IFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMY----LTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYD-PDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLAD-RNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADL 540 L N+F V + D+R L+ + LP R+FD +G +++R+ +VT + D I++ +I+ G + ++ NW++ L +P +A+ S R + K + + D+ + + I G R ++++ EA E F S LR+ + A+Y+P + + +++ + + GD + G++ + L L P+ +L +++ A A+ +FE LD E P+ GT V G ++ ++F Y ++ +L DIS +PGQ +AL G +G+GKST+ NL+ RFY + G I IDG E+ +LR I VTQ LF+ TV N+ D A ED+ KA A A DF+ LP+ L+T VGE GV LSGG++QRL+IARALLK+ P+L+LDEAT+++D ++E IQ ALD++MK RT++VIAHRLSTI+ AD I V+++G+++E GT+D+LLA++G +A L Sbjct: 98 LGNYFLAKVSLGLVHDLRVQLFNNLLVLPNRYFDKHNSGHLISRITFNVTMVTGAATDAIKV----VIREGMTVIFLFASLLFMNWKLTLVMVAILPLIAVMVRTASKKFRKQSKKIQLAMGDVTHVASETIQGYRVVRSFGGEAYEEKRFLDASQGNTDKQLRMTRTGAIYTPLLQLVIYSAMAILMFL--VLYLRGDASAGDMVAYITLAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDVE--PEVDTGTVERDSVSGRLDVRNLSFTYPGTERQVLDDISFSVEPGQMVALVGRSGSGKSTLANLIPRFYHHDKGEILIDGVEVEQYKLLNLRRHIAQVTQHVTLFSDTVANNIAYGDLAGAPREDIEKAARDAYAMDFIAQLPEGLDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDQVMKGRTTLVIAHRLSTIEKADLILVMDQGRIVERGTHDDLLAQNGYYARL 587
BLAST of abc transporter atp-binding protein vs. SwissProt
Match: gi|67468765|sp|Q7N6C6.1|MSBA_PHOLL (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 293.123 bits (749), Expect = 8.069e-91 Identity = 178/528 (33.71%), Postives = 286/528 (54.17%), Query Frame = 0 Query: 25 ANGDFYMWIALALGAFFLKDGLN------CLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGA----VALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQ-PILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNA-SDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADL 540 A+ D W+ L + A + GL+ C+ + V+ +R L+ + +P+ +FD + TG +++R+ D E+V L+++++ GA + ++M+ +W+++L + P ++L + S R K ++S + A + G +++ + + E FN++S +R ++++ ++ P + + VL + LT G++ F + P+ L +N AA +F ILD E E D DG K G + F VTF Y + P L++IS+ G+ +AL G +G+GKSTI NLL RFY+ + G+I +DG +L SLR + V+Q LFN TV N+ A N S E++ KA E A A DF+R L L+T +GE GV LSGG++QR++IARALL+D P+L+LDEAT+++D ++E IQ ALDEL KNRTS+VIAHRLSTI+NAD I V+E G ++E G + LL ++G ++ L Sbjct: 58 ASSDVLKWMPLIVIALMIMRGLSGFVSSYCI-----SWVSGKVVMQMRRRLFSHMMGMPVSFFDQQSTGTLLSRITYDS---EQVASSSSSA-LITVVREGASIIGLFVLMFYYSWQLSLILIVIAPIVSLVIRVVSKRFRSISKNMQNSMGQVTASAEQMLKGHKEVLIFGGQNVETERFNKVSNHMRQQGMKMVSASSISDPIIQLIASFALAFVLYAASFPDIMETLTAGKITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFSILDMEQEKD--DGKLELKKANGDIEFRNVTFCYPTKELPALQNISMYIPAGKIVALVGRSGSGKSTIANLLTRFYDVNEGNIFLDGHDLREYKLSSLRGQVALVSQNVHLFNDTVANNIAYASENRYSREEIEKAAEMAYAMDFIRKLDNGLDTMIGENGVLLSGGQRQRIAIARALLRDSPVLILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIENADEILVVEDGHIVERGDHLSLLERNGVYSQL 574
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1200391806|gb|OUV09936.1| (ABC transporter ATP-binding protein [Verrucomicrobiaceae bacterium TMED86]) HSP 1 Score: 854.744 bits (2207), Expect = 0.000e+0 Identity = 429/546 (78.57%), Postives = 478/546 (87.55%), Query Frame = 0 Query: 1 MAGSVVIFPSIAEHILDIIIPAKNANGDFYM-WIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADLANTIK 545 MAGSV+IFP + HI IIP N D +M W+ L LG+FFLKD LNC RI+LNNHFEQ VI+DIRSDLY+KIQRLPLRWFDTRRTGD+MTRVVEDVTAMER+LIDGIELGL+S+IQI AV + MY N VA WATLP+PFL LGA+IY+ DARDRYK QR+SASDLNALLHDNIAGIRQIKAYAAE +EH++FNRLS +R TLR+MKWWA YSP MSFL M+GYVLVLG GG AVM G++ +L FFLLLSLFY+PVSKLHQLNQMALSSRAAADRVFEILDS+DEP+A+ G LA+PV G V F V+FAYD DQP L ++SL A GQTIALAGSTGAGKSTIVNLLCRFYEY GSI+IDG+ELNTLAK+SLR SIGYVTQEAFLFNGTVRENL LADRNAS++DLW+ALEAARAADFVR LP+QLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIV+AHRLSTIQNAD+IYVL KG++IEEGTY+ELL DG FA+LA++IK Sbjct: 13 MAGSVIIFPLVTRHITGEIIP--NKQFDLFMPWVLLGLGSFFLKDALNCARIILNNHFEQRVIYDIRSDLYQKIQRLPLRWFDTRRTGDVMTRVVEDVTAMERILIDGIELGLISVIQILAVGITMYWMNASVAAWATLPVPFLVLGAWIYTRDARDRYKQQRESASDLNALLHDNIAGIRQIKAYAAEKEEHLHFNRLSNAMRRATLRVMKWWAFYSPGMSFLNMIGYVLVLGFGGYAVMTGEMKLPDLLAFFLLLSLFYEPVSKLHQLNQMALSSRAAADRVFEILDSKDEPEAASGASLAQPVTGDVVFDDVSFAYDEDQPTLHNVSLQATRGQTIALAGSTGAGKSTIVNLLCRFYEYDSGSISIDGQELNTLAKNSLRASIGYVTQEAFLFNGTVRENLALADRNASNDDLWRALEAARAADFVRELPEQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVVAHRLSTIQNADKIYVLGKGRLIEEGTYEELLENDGPFAELASSIK 556
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|740295959|ref|WP_038134072.1| (MULTISPECIES: ABC transporter ATP-binding protein [unclassified Verrucomicrobia (miscellaneous)]) HSP 1 Score: 827.395 bits (2136), Expect = 0.000e+0 Identity = 416/545 (76.33%), Postives = 473/545 (86.79%), Query Frame = 0 Query: 1 MAGSVVIFPSIAEHILDIIIPAKNANGDFYMWIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADLANTIK 545 MA SV++FP + +HI IIP + + F W+ + L +FF+KD LNC RI+LNNHFEQ VIFDIRSDLYRKIQRLPLRWFD+RRTGDIMTRVVEDVTAMER+LIDGIELGL+S+IQI AV + MY + VALWATLPIPFLA+GA+IY+ AR RYK QRD++SDLNA+LHDNIAGIRQIKAYAAE DEH +FN LSG LR TLR+MKWWA Y+PSMSF GYVLVLG GG AVM G + EL FFLLLSLFY+PVSKLHQLNQMALSSRAAADRVFEILDS+DEPDA+ G L +PV+GAV F+ V+F+YD QP L ++SL A+PGQTIALAGSTGAGKSTIVNLLCRFYEY GS+ IDG+ELNTLAK SLR++IGYVTQEAFLFNGTVRENL LADR+A+D+ +WKALEAA+A +FVRALP+QL+TNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVL+KG+VIE+G YD L+ + G+FA+LANTIK Sbjct: 28 MAASVIVFPLVTKHITGEIIPNRQFDV-FLPWVLVGLLSFFIKDALNCARIILNNHFEQRVIFDIRSDLYRKIQRLPLRWFDSRRTGDIMTRVVEDVTAMERILIDGIELGLISIIQILAVGITMYWLDPTVALWATLPIPFLAMGAWIYTRKARGRYKAQRDASSDLNAVLHDNIAGIRQIKAYAAEKDEHEHFNGLSGALRKATLRIMKWWAFYNPSMSFFNSTGYVLVLGFGGYAVMQGTMQFDELLTFFLLLSLFYEPVSKLHQLNQMALSSRAAADRVFEILDSDDEPDAASGDPLPRPVRGAVEFNNVSFSYDKGQPTLDEVSLIAEPGQTIALAGSTGAGKSTIVNLLCRFYEYDNGSVLIDGKELNTLAKGSLRDAIGYVTQEAFLFNGTVRENLSLADRHANDDAIWKALEAAKAGEFVRALPEQLDTNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLQKGRVIEKGPYDVLINQGGKFAELANTIK 571
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|754477333|ref|WP_041894603.1| (ABC transporter ATP-binding protein [Verrucomicrobia bacterium SCGC AAA164-L15]) HSP 1 Score: 825.469 bits (2131), Expect = 0.000e+0 Identity = 415/545 (76.15%), Postives = 472/545 (86.61%), Query Frame = 0 Query: 1 MAGSVVIFPSIAEHILDIIIPAKNANGDFYMWIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADLANTIK 545 MA SV++FP + +HI IIP + + F W+ + L +FF+KD LNC RI+LNNHFEQ VIFDIRSDLYRKIQRLPLRWFD+RRTGDIMTRVVEDVTAMER+LIDGIELGL+S+IQI AV + MY + VALWATLPIPFLA+GA+IY+ AR RYK QRD++SDLNA+LHDNIAGIRQIKAYAAE DEH +FN LSG LR TLR+MKWWA Y+PSMSF GYVLVLG GG AVM G + EL FFLLLSLFY+PVSKLHQLNQMALSSRAAADRVFEILDS+DEPDA+ G L +PV+GAV F+ V+F+YD QP L ++SL A+PGQTIALAGSTGAGKSTIVNLLCRFYEY GS+ IDG+ELNTLAK SLR++IGYVTQEAFLFNGTVRENL LADR+A+D+ +WKALEAA+A +FVRALP+QL+TNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELM NRTSIVIAHRLSTIQNADRIYVL+KG+VIE+G YD L+ + G+FA+LANTIK Sbjct: 28 MAASVIVFPLVTKHITGEIIPNRQFDV-FLPWVLVGLLSFFIKDALNCARIILNNHFEQRVIFDIRSDLYRKIQRLPLRWFDSRRTGDIMTRVVEDVTAMERILIDGIELGLISIIQILAVGITMYWLDPTVALWATLPIPFLAMGAWIYTRKARGRYKAQRDASSDLNAVLHDNIAGIRQIKAYAAEKDEHEHFNGLSGALRKATLRIMKWWAFYNPSMSFFNSTGYVLVLGFGGYAVMQGTMQFDELLTFFLLLSLFYEPVSKLHQLNQMALSSRAAADRVFEILDSDDEPDAASGDPLPRPVRGAVEFNNVSFSYDKGQPTLDEVSLIAEPGQTIALAGSTGAGKSTIVNLLCRFYEYDNGSVLIDGKELNTLAKGSLRDAIGYVTQEAFLFNGTVRENLSLADRHANDDAIWKALEAAKAGEFVRALPEQLDTNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMNNRTSIVIAHRLSTIQNADRIYVLQKGRVIEKGPYDVLINQGGKFAELANTIK 571
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1200265812|gb|OUT88706.1| (ABC transporter ATP-binding protein [Roseibacillus sp. TMED18]) HSP 1 Score: 753.436 bits (1944), Expect = 0.000e+0 Identity = 378/541 (69.87%), Postives = 443/541 (81.89%), Query Frame = 0 Query: 1 MAGSVVIFPSIAEHILDIIIPAKNANGDFYMWIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADLA 541 MA SVV+FPSI +++D I+P + + W+ L L FFLKD LNC RI+LNNHFEQ VIFDIRSDLY+K+QRLPLRWFD RRTGDIMTRVVEDVTAMERVLIDGIELGLV++IQ+ AV VMY T+ VALWATLP+PFL +GA+IY+ +ARDRY+GQRD+ASD+N+LLHDN++GI QIK Y AE EH FN S +LR +LR+M+WWA YSP MSF+GMVGY LVLG G AVM G + GEL FFLLLSLFY+PVSKLHQLNQMALSSRAAADRVFEILDSEDEP + G L KPV G V V+F+Y +QP L+DI+L A+PG+TIAL G TGAGKSTIVNLLCRFYEY GSITIDG+ELN K SLR ++GYVTQEAFLFNGTVRENL+LA A + DLWKALE+ARA R LP L+TNVGERGVKLSGGEKQRLSIARALLKDPP+LLLDEATASVD++TE LIQ+AL+ LM +R++ VIAHRLSTI+NADRIYVL+ G V+E+GT++ELL DG +A+L+ Sbjct: 28 MALSVVVFPSITGYVVDEILPXPARHHELLFWVFLGLMGFFLKDALNCARIILNNHFEQRVIFDIRSDLYQKLQRLPLRWFDGRRTGDIMTRVVEDVTAMERVLIDGIELGLVAMIQLLAVGAVMYYTDVTVALWATLPVPFLMIGAWIYTRNARDRYRGQRDAASDMNSLLHDNVSGISQIKTYTAEDREHERFNAFSDKLRQASLRIMRWWAFYSPGMSFVGMVGYALVLGFGSQAVMSGRMDLGELVLFFLLLSLFYEPVSKLHQLNQMALSSRAAADRVFEILDSEDEPHSEAGGALTKPVLGDVKLESVSFSYG-EQPTLRDITLHARPGETIALVGPTGAGKSTIVNLLCRFYEYDSGSITIDGQELNQTCKSSLRSALGYVTQEAFLFNGTVRENLLLAKPEADEADLWKALESARADSLTRELPDGLDTNVGERGVKLSGGEKQRLSIARALLKDPPVLLLDEATASVDSETERLIQEALEALMADRSAFVIAHRLSTIRNADRIYVLDGGTVVEQGTHEELLKADGLYAELS 567
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1240605650|gb|PAW60232.1| (ABC transporter ATP-binding protein [Verrucomicrobiae bacterium Tous-C3TDCM] >gi|1241362765|gb|PAZ06419.1| ABC transporter ATP-binding protein [Verrucomicrobiae bacterium AMD-G2]) HSP 1 Score: 724.161 bits (1868), Expect = 0.000e+0 Identity = 353/541 (65.25%), Postives = 434/541 (80.22%), Query Frame = 0 Query: 1 MAGSVVIFPSIAEHILDIIIPAKNANGDFYMWIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADLA 541 M + +FP+ H++D IIP + +F WIALA F LKDGLN LRI++NN FEQ VIFDIRSDLY KIQ LPL+WFDTRRTGD+MTRVVEDVT MERVLIDGIE GLV+L+Q+ V + +++ N VALWATLP+P LA+GA+ YS RDRYK QR+++SDLNALLHDNI+GIRQIKAYAAE +E FNR S LR LR+MKWWA+YSP MS L M GYVLVL GG AVM+G L+ G F L LSLFY+P+ +L+ LNQM LS RAAADRVFEI+D++DE +A+ G L ++G V F V+F+Y +QP L++I+L+AKPGQT+AL G TGAGK+TI++LL RFYE G IT+D EL++L+K SLR+ +GYVTQEAFLFNGTVRENL LA R+ASDE++W ALEAA A+ FV+ LP++L+TNVGERGVKLSGGEKQRLSIAR+LLK+ PILLLDEATASVD++TE LIQ ALD LMKNRTS VIAHRLSTIQNAD I+VL+ G+VIE+GT++ELLA++G++A+L Sbjct: 1 MTLATFVFPNATRHVIDNIIPHPQRHTEFGYWIALAFVGFLLKDGLNSLRIMVNNTFEQKVIFDIRSDLYEKIQHLPLQWFDTRRTGDVMTRVVEDVTNMERVLIDGIEQGLVALLQVLGVGVFLFILNPTVALWATLPVPLLAVGAWFYSTKGRDRYKNQREASSDLNALLHDNISGIRQIKAYAAEREELARFNRFSDILRRANLRMMKWWALYSPGMSLLRMTGYVLVLAFGGRAVMEGTLSLGSFTGFLLFLSLFYEPIDRLNSLNQMILSGRAAADRVFEIMDTDDEVNANSGAELPANLRGHVRFENVSFSYQ-NQPTLENITLEAKPGQTVALVGPTGAGKTTILSLLARFYETTSGRITMDDIELSSLSKASLRDRMGYVTQEAFLFNGTVRENLQLAKRDASDEEMWNALEAAHASPFVKELPQRLDTNVGERGVKLSGGEKQRLSIARSLLKNAPILLLDEATASVDSETERLIQSALDHLMKNRTSFVIAHRLSTIQNADVIFVLDAGKVIEQGTHNELLAQNGKYAELC 540
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1175338408|ref|WP_081886200.1| (ABC transporter ATP-binding protein [Haloferula sp. BvORR071]) HSP 1 Score: 718.383 bits (1853), Expect = 0.000e+0 Identity = 356/541 (65.80%), Postives = 431/541 (79.67%), Query Frame = 0 Query: 1 MAGSVVIFPSIAEHILDIIIPAKNANGDFYMWIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADLA 541 M +V +FP+ + +LD IIP +G+F W+ ++L F LKDGLN LRI +NN FEQ VI+DIR DLY KIQ+LPLRWFDTRRTGD+MTRVVEDVT MERVLIDGIE GLV+ +Q+ V + ++ N VA ATLP+P LALGA+IYS RDRY+ QRD++SDLNA+LHDNI+GIRQIKAYAAE E FNR S LR TLR+MKWWA+YSP MSF+ M GYVLVL GG AVM GDL+ G+ F F+L LSLFY+P+ +L+ LNQM LS RAAADRVFEILDSE EP+A++G L ++ V F V+FAY +QP L ++ L+AKPGQT+AL GSTGAGKST+++LL RFYE G+ITIDG ++ TL+K SLR+ +GYVTQE FLFNGTVRENL LA R ASD ++W AL+AA A FVRALP+QL+TNVGERGVKLSGGEKQRLSIARALLK+ PILLLDEATASVD++TE IQ ALD LM+NRT+ VIAHRLSTI+NAD IYVLEKG+VIE+GT++EL AK G++A+L Sbjct: 1 MTLAVFVFPNASRIVLDDIIPNPARHGEFTFWVVISLLGFLLKDGLNSLRIFVNNTFEQKVIYDIREDLYSKIQQLPLRWFDTRRTGDVMTRVVEDVTNMERVLIDGIEQGLVAALQVIGVGIFLFYMNPTVACAATLPVPLLALGAWIYSTRGRDRYRNQRDASSDLNAILHDNISGIRQIKAYAAEGPELDRFNRYSEALRRVTLRMMKWWAIYSPLMSFVRMSGYVLVLFFGGSAVMSGDLSIGKFFAFYLSLSLFYEPIDRLNGLNQMILSGRAAADRVFEILDSEVEPNATEGAELPAQIRAHVRFDGVSFAYG-EQPTLHEVDLEAKPGQTVALVGSTGAGKSTVLSLLTRFYERDSGAITIDGIDIATLSKQSLRDHLGYVTQEPFLFNGTVRENLALAKREASDAEMWSALDAAHADKFVRALPQQLDTNVGERGVKLSGGEKQRLSIARALLKNAPILLLDEATASVDSETERQIQDALDHLMQNRTAFVIAHRLSTIRNADIIYVLEKGRVIEQGTHEELWAKGGKYAELC 540
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1110140520|emb|SHJ69289.1| (ATP-binding cassette, subfamily B, MsbA [Rubritalea squalenifaciens DSM 18772]) HSP 1 Score: 659.833 bits (1701), Expect = 0.000e+0 Identity = 319/520 (61.35%), Postives = 410/520 (78.85%), Query Frame = 0 Query: 23 KNANGDFYMWIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELF-KFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADLA 541 KN+ + ++ +AL AFF +D NCLRIL+NN FEQ IFD+RS+LY K+QRLPL+WFD++RTGDIMTRV ED+ AMER+LIDG+E GL++++QI ++ + + + A PIPFLA+GA+IY+ +AR+RY+ + D+NALL DNI+G+RQIK+YAAE DEH FN+LS ++R TL++MK+WAVYSP+MSF+ GYVLVLG GG ++ E++ FF ++ Y+P+ +LH LNQMALSS+AAA+RVFEILD++DE A +G L +P+ G V F V F+Y+ D+P L DI+ AKPGQTIAL GSTGAGKST+VNLL RFYEY GSITIDG ELNTL K SLR SI YVTQ++FLFNGTVRENL+L R+A+DE+LW+AL+AA A+ FV+ LP+ L+TNVGERGVKLSGGEKQRLSIARALLK+ PIL+LDEATASVD++TE LIQ ALD LM RT+ VIAHRLSTIQNAD I+VL++G +IE GT+ ELLAK+G++A L+ Sbjct: 97 KNSTSELIIYTLIALAAFFGRDLFNCLRILINNVFEQKAIFDLRSELYSKLQRLPLKWFDSKRTGDIMTRVAEDIPAMERLLIDGVEQGLIAILQIVGISAFLIWKDPILGFTALAPIPFLAIGAWIYTKNARERYRDLKRFTGDMNALLSDNISGVRQIKSYAAEEDEHKRFNKLSNKVRQATLKVMKYWAVYSPTMSFVNSCGYVLVLGVGGYRIITDPAVGTEIYLYFFTIMWALYEPIGRLHGLNQMALSSKAAAERVFEILDTDDELHADEGKMLPQPLNGEVIFKNVNFSYE-DEPTLHDITFTAKPGQTIALVGSTGAGKSTLVNLLTRFYEYDDGSITIDGRELNTLNKPSLRSSIAYVTQDSFLFNGTVRENLILGKRDATDEELWRALDAANASPFVKELPELLDTNVGERGVKLSGGEKQRLSIARALLKNQPILILDEATASVDSKTEKLIQDALDNLMHTRTAFVIAHRLSTIQNADVIHVLDRGHIIESGTHAELLAKNGKYAALS 615
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1200369821|gb|OUU88858.1| (ABC transporter ATP-binding protein [Verrucomicrobiaceae bacterium TMED76]) HSP 1 Score: 649.047 bits (1673), Expect = 0.000e+0 Identity = 317/538 (58.92%), Postives = 411/538 (76.39%), Query Frame = 0 Query: 6 VIFPSIAEHILDIIIPAKNANGDFYMWIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADLANT 543 ++FP+IA +LD +P K + + LA A+F +D LN LRI+LNN FEQ VI+DIRSDLY K+QRLPL+WFD R TGDIMTRV EDVT+MERVLIDGIE GLV+L+QI AV+LVM+ N +A WA +P+PFL +GA IY+ RDRY+ R + S++NALLHDNI+GIRQIKAY EA E FN S ++R TLR M WA+Y+PSMSF+G +G++LV+G GG + G ++ GE+ F L L+LFY+PVS+LHQLNQM S RAAA+RVF+ILDS DEP DG +L PV G V + V F Y + ++L+A+PGQTIAL G TGAGK+T++NLL RFYE+ G I ID E+ ++K+SLR +IGYVTQE+FLFNGTV+ENL+LA+R+AS++ +W +L+ A A DF++ LP+ L+T VGERGVKLS GEKQR+SIARALL++PPILLLDEATASVD +TE LIQQAL+ LMK+RTS VIAHRLST++ AD IYV++ G+V+E GT+++LL+ G +A+L T Sbjct: 33 IVFPNIARLVLDEAVPQKREDL-LISYTLLACLAYFGRDLLNSLRIMLNNTFEQKVIYDIRSDLYEKLQRLPLKWFDNRPTGDIMTRVAEDVTSMERVLIDGIEQGLVALLQIVAVSLVMFWINPTLAAWAVVPVPFLFIGAMIYT-STRDRYRTVRKATSEMNALLHDNISGIRQIKAYTMEASELKRFNAASDKVRKATLRTMFAWAIYNPSMSFIGGIGFILVIGFGGNLALQGQISPGEITAFLLYLTLFYEPVSRLHQLNQMLQSGRAAAERVFDILDSVDEPGLDDGVKLKVPVNGKVEYRDVEFNYAEGIQTINGVNLNAEPGQTIALVGPTGAGKTTVINLLTRFYEHGSGDILIDEVEVKKISKESLRSAIGYVTQESFLFNGTVKENLLLANRDASEDQMWDSLKVANAYDFIKCLPEGLDTQVGERGVKLSVGEKQRVSIARALLRNPPILLLDEATASVDTETERLIQQALERLMKDRTSFVIAHRLSTVRGADNIYVMDNGKVVESGTHEDLLSMSGLYAELCRT 568
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1353605866|ref|WP_105043411.1| (ABC transporter ATP-binding protein [Rubritalea profundi] >gi|1350982838|gb|PQJ28920.1| ABC transporter ATP-binding protein [Rubritalea profundi]) HSP 1 Score: 640.188 bits (1650), Expect = 0.000e+0 Identity = 309/512 (60.35%), Postives = 406/512 (79.30%), Query Frame = 0 Query: 31 MWIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELF-KFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADLA 541 ++ +AL AFF +D NCLRI +NN FEQ IFD+RS+LY K+QRLPL+WFD++RTGDIMTRV ED+ AMER+LIDG+E GL++++QI V+ + + + A P+P LA+GA IY+ +ARDR++ + ++NALL DNIAG+ QIK+YAAEADE FN+LS +++ TTL++MK+WA+YSPSMSF+ +GYVLVLG GG ++ E++ FF ++ Y+P+SKLH LNQMALSS+AAA+RVFEILD++DE A DG L +PV+G V F +V+F+YD + P L +ISL A PGQTIAL GSTGAGKST+VNLL RFYEY GSITIDG ELNTL K SLR +I YVTQ++FLFNG+VRENL+L R+A+DE+LW+AL+AA A+ F++ LP L+TNVGERGVKLSGGEKQR+SIARALLK+ PIL+LDEATASVD++TE LIQ ALD LM RT+ VIAHRLSTI+NAD I+VL++G++IE GT+ L+ ++G++A+L+ Sbjct: 100 LYTCIALAAFFGRDLFNCLRIFINNVFEQKAIFDLRSELYSKLQRLPLKWFDSKRTGDIMTRVAEDIPAMERLLIDGVEQGLIAVLQIIGVSAFLIWKDPVLGFTALAPLPLLAIGATIYTRNARDRHRDVKKYTGEMNALLSDNIAGVNQIKSYAAEADELKRFNKLSNKVQHTTLKVMKYWALYSPSMSFVNSLGYVLVLGVGGYRIITDPSVGTEIYLYFFTIMWALYEPISKLHGLNQMALSSKAAAERVFEILDTDDEIHADDGEILPQPVRGEVCFDQVSFSYD-EIPTLHNISLKAMPGQTIALVGSTGAGKSTLVNLLTRFYEYDSGSITIDGYELNTLNKPSLRSNIAYVTQDSFLFNGSVRENLLLGKRDATDEELWRALDAANASQFIKELPSHLDTNVGERGVKLSGGEKQRVSIARALLKNQPILILDEATASVDSKTEKLIQDALDNLMNTRTAFVIAHRLSTIKNADIIHVLDRGRIIESGTHASLIQQNGKYAELS 610
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1154910214|ref|WP_078816063.1| (ABC transporter ATP-binding protein [Prosthecobacter debontii] >gi|1152225368|emb|SKB08397.1| ATP-binding cassette, subfamily B [Prosthecobacter debontii]) HSP 1 Score: 614.764 bits (1584), Expect = 0.000e+0 Identity = 307/539 (56.96%), Postives = 392/539 (72.73%), Query Frame = 0 Query: 5 VVIFPSIAEHILDIIIPAKNANGDFYMWIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADLANT 543 VV+FP++ +LD+++P + + +A GA+F + N LRILLNN FEQ VI+D+RSDLY ++Q LPLRWFD R TGDIMT V ED+ +ERVLIDGIE GLV++IQI V + M+ + +ALWA +PIPFL GA Y+ +R+R++ R ++S +N+LLHDN+AG+RQIKAYA E +EH FN S L+T TL +M+ WAVY P M FL VG VLVL G +M+G + +G+L F LLL FYDP+ +LHQLNQ+ S RAA +RVFEILD+E E D +G L K +QG V + V F+Y P + I L+AKPGQTIAL G TG GKST++NLL RFYEY G ITIDG ++ + K LR IGYVTQE+F+FNGTVRENL++ R+AS+++LWK L A A FVR L K L+T VGERGVKLS GEKQRLSIARALL++PPILLLDEATASVD +TE IQ ALD LM NRTS VIAHRLST+++AD IYVLE+G ++E+G+++EL+A DG +A L T Sbjct: 32 VVVFPAVTREVLDVVVPQGQWD-RLTPLVLMAAGAYFAQHFFNSLRILLNNTFEQKVIYDLRSDLYERLQTLPLRWFDNRPTGDIMTTVGEDIPNVERVLIDGIEQGLVAVIQIAVVGVFMFQADATLALWALVPIPFLIAGALGYTRTSRERHRAVRRASSGMNSLLHDNVAGMRQIKAYAMEREEHGRFNGASAALKTATLHVMRIWAVYRPGMHFLTSVGMVLVLWVGAKGLMEGRIEKGDLAAFLLLLKYFYDPIEQLHQLNQIIQSGRAAGERVFEILDAEPEADTGEGIVL-KDIQGHVRYENVGFSYGGKIPTVHGIHLEAKPGQTIALVGPTGTGKSTLINLLTRFYEYDEGVITIDGVPVHEMNKAWLRGRIGYVTQESFMFNGTVRENLLIGKRDASEDELWKVLADANADAFVRRLDKGLDTRVGERGVKLSVGEKQRLSIARALLRNPPILLLDEATASVDTETERQIQAALDRLMMNRTSFVIAHRLSTVRHADIIYVLERGAIVEKGSHEELVANDGLYARLCRT 568 The following BLAST results are available for this feature:
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 21
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BLAST of abc transporter atp-binding protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of abc transporter atp-binding protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2503_size14991:11792..13432+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold2503_size14991-processed-gene-0.2 ID=snap_masked-scaffold2503_size14991-processed-gene-0.2|Name=abc transporter atp-binding protein|organism=Tigriopus kingsejongensis|type=gene|length=1641bp|location=Sequence derived from alignment at scaffold2503_size14991:11792..13432+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'abc transporter atp-binding protein' has the following synonyms
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