best1_pig ame: full, snap_masked-scaffold251_size238241-processed-gene-1.5 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of best1_pig ame: full vs. L. salmonis genes
Match: EMLSAG00000007648 (supercontig:LSalAtl2s:LSalAtl2s443:291229:423149:1 gene:EMLSAG00000007648 transcript:EMLSAT00000007648 description:"maker-LSalAtl2s443-snap-gene-4.37") HSP 1 Score: 68.1662 bits (165), Expect = 1.511e-12 Identity = 50/157 (31.85%), Postives = 69/157 (43.95%), Query Frame = 0 Query: 52 YFSVVTLAVYSFLLSTLMGRQFLDPSKK-------HLGHEVDLVVPVFTFLQFFFYMGWLK-----------------------EH-----------------PPMVRDQFWDDIFPELPYTAATEESRIDPDIGAATQIDICEVEAEF-LPLLEED 160 Y VVTLA Y F + T++GRQ +D KK + ++DL +P+FT LQFFFYMG LK H PPMV+D +WD +PYT A+ + G+A + I E + LP +EE+ Sbjct: 237 YTQVVTLATYVFFIFTVIGRQKIDTLKKGEYMRSGRMPMDIDLYIPIFTVLQFFFYMGLLKVAEQLINPFGDDDEDFELNWLVDRHMKASFLGCDILMDPDRIPPMVKDFYWDKQNCPIPYTEASMHFKRKTYKGSADDMIIPESKQHMVLPEIEEE 393
BLAST of best1_pig ame: full vs. L. salmonis genes
Match: EMLSAG00000012690 (supercontig:LSalAtl2s:LSalAtl2s961:190963:218628:-1 gene:EMLSAG00000012690 transcript:EMLSAT00000012690 description:"maker-LSalAtl2s961-augustus-gene-1.22") HSP 1 Score: 55.8398 bits (133), Expect = 1.360e-8 Identity = 43/154 (27.92%), Postives = 61/154 (39.61%), Query Frame = 0 Query: 50 LNYFSVVTLAVYSFLLSTLMGRQFLDP-------------SKKH------LGHE-VDLVVPVFTFLQFFFYMGWLK--------------------------------------EHPPMVRDQFWDDIFP-ELPYTAATEESRIDPDIGAATQI 144 L Y VVTLAVYS+ + LMG Q++ P + KH G++ ++L P F LQF FY+GWLK +P +++D W++ P LPYT T R + G A +I Sbjct: 267 LVYTQVVTLAVYSYFAAALMGAQWVIPESQEDYKTTYKLPTFKHETVDGEFGYQPINLYFPFFLMLQFIFYVGWLKVAEILINPFGEDDDDFELNYIIDRHFRVAYMIVDEMHDNNPELLKDIHWNETVPNNLPYTEDTAHYRKEEPKGGAEKI 420
BLAST of best1_pig ame: full vs. SwissProt
Match: gi|38503268|sp|Q8WMR7.1|BEST1_PIG (RecName: Full=Bestrophin-1; AltName: Full=Vitelliform macular dystrophy protein 2 homolog) HSP 1 Score: 115.546 bits (288), Expect = 3.024e-27 Identity = 71/186 (38.17%), Postives = 92/186 (49.46%), Query Frame = 0 Query: 14 TKLWVKGPRADVV------DEILNLKRARIAQLFPLVTGHRDLNYFSVVTLAVYSFLLSTLMGRQFLDPSKKHLGHEVDLVVPVFTFLQFFFYMGWLK--------------------------------------EHPPMVRDQFWDDIFPELPYTAATEESRIDPDIGAATQIDICEVEAEFLP 155 TK W+ G D V DE +N R + L+ L Y VVT+AVYSF L+ L+GRQFL+P+K + GHE+DLVVP+FTFLQFFFY GWLK + PPM RD +W+D P PYTAA+ +SR G+ I + + + EF P Sbjct: 40 TKAWIGGRIRDPVLLQSLLDE-MNTLRTQCGHLYAYDWISVPLVYTQVVTVAVYSFFLACLVGRQFLNPAKAYPGHEMDLVVPLFTFLQFFFYAGWLKVAEQLINPFGEDDDDFETNWIVDRSLQVSLSAVDEMHHDLPPMERDMYWNDPEPHPPYTAASAQSRRPSFFGSTFNISLGKEDMEFQP 224
BLAST of best1_pig ame: full vs. SwissProt
Match: gi|341940574|sp|O88870.3|BEST1_MOUSE (RecName: Full=Bestrophin-1; AltName: Full=Vitelliform macular dystrophy protein 2 homolog) HSP 1 Score: 107.071 bits (266), Expect = 7.513e-24 Identity = 61/160 (38.12%), Postives = 82/160 (51.25%), Query Frame = 0 Query: 25 VVDEILNLKRARIAQLFPLVTGHRDLNYFSVVTLAVYSFLLSTLMGRQFLDPSKKHLGHEVDLVVPVFTFLQFFFYMGWLK--------------------------------------EHPPMVRDQFWDDIFPELPYTAATEESRIDPDIGAATQIDI 146 +++E+ L R + QL+ L Y VVT+AVYSF L+ L+GRQFL+P+K + GHE+DLVVPVFT LQF FYMGWLK PPM RD +W++ P+ PYTAA+ SR +G+ I + Sbjct: 210 LMNEVCTL-RTQCGQLYAYDWISIPLVYTQVVTVAVYSFFLACLIGRQFLNPNKDYPGHEMDLVVPVFTILQFLFYMGWLKVAEQLINPFGEDDDDFETNWIIDRNLQVSLLSVDGMHQNLPPMERDMYWNEAAPQPPYTAASARSRRHSFMGSTFNISL 368
BLAST of best1_pig ame: full vs. SwissProt
Match: gi|62511161|sp|Q6UY87.1|BEST1_MACFA (RecName: Full=Bestrophin-1; AltName: Full=Vitelliform macular dystrophy protein 2) HSP 1 Score: 103.99 bits (258), Expect = 9.170e-23 Identity = 61/164 (37.20%), Postives = 82/164 (50.00%), Query Frame = 0 Query: 30 LNLKRARIAQLFPLVTGHRDLNYFSVVTLAVYSFLLSTLMGRQFLDPSKKHLGHEVDLVVPVFTFLQFFFYMGWLK--------------------------------------EHPPMVRDQFWDDIFPELPYTAATEESRIDPDIGAATQIDICEVEAEFLP 155 +N R + L+ L Y VVT+AVYSF L+ L+GRQFL+P+K + GHE+DLVVPVFTFLQFFFY+GWLK + P M D +W++ P PYTAA+ + R +G+ I + + E EF P Sbjct: 214 MNTLRTQCGHLYAYDWISIPLVYTQVVTVAVYSFFLTCLVGRQFLNPAKAYPGHELDLVVPVFTFLQFFFYVGWLKVAEQLINPFGEDDDDFETNWIVDRNLQVSLLAVDEMHQDLPRMEPDMYWNEPEPHPPYTAASAQFRRASFMGSTFNISLNKEEMEFQP 377
BLAST of best1_pig ame: full vs. SwissProt
Match: gi|6175195|sp|O76090.1|BEST1_HUMAN (RecName: Full=Bestrophin-1; AltName: Full=TU15B; AltName: Full=Vitelliform macular dystrophy protein 2) HSP 1 Score: 103.99 bits (258), Expect = 9.693e-23 Identity = 61/164 (37.20%), Postives = 82/164 (50.00%), Query Frame = 0 Query: 30 LNLKRARIAQLFPLVTGHRDLNYFSVVTLAVYSFLLSTLMGRQFLDPSKKHLGHEVDLVVPVFTFLQFFFYMGWLK--------------------------------------EHPPMVRDQFWDDIFPELPYTAATEESRIDPDIGAATQIDICEVEAEFLP 155 +N R + L+ L Y VVT+AVYSF L+ L+GRQFL+P+K + GHE+DLVVPVFTFLQFFFY+GWLK + P M D +W+ P+ PYTAA+ + R +G+ I + + E EF P Sbjct: 214 MNTLRTQCGHLYAYDWISIPLVYTQVVTVAVYSFFLTCLVGRQFLNPAKAYPGHELDLVVPVFTFLQFFFYVGWLKVAEQLINPFGEDDDDFETNWIVDRNLQVSLLAVDEMHQDLPRMEPDMYWNKPEPQPPYTAASAQFRRASFMGSTFNISLNKEEMEFQP 377
BLAST of best1_pig ame: full vs. SwissProt
Match: gi|68066237|sp|Q6H1V1.1|BEST3_MOUSE (RecName: Full=Bestrophin-3; AltName: Full=Vitelliform macular dystrophy 2-like protein 3) HSP 1 Score: 93.2041 bits (230), Expect = 3.794e-19 Identity = 50/135 (37.04%), Postives = 66/135 (48.89%), Query Frame = 0 Query: 50 LNYFSVVTLAVYSFLLSTLMGRQFLDPSKKHLGHEVDLVVPVFTFLQFFFYMGWLK--------------------------------------EHPPMVRDQFWDDIFPELPYTAATEESRIDPDIGAATQIDI 146 L Y VVTLAVY+F + L+GRQFLDP+K ++GH++DL VP+FT LQFFFY GWLK P M +D +WDD PYT A + I +G+ Q+ + Sbjct: 234 LVYTQVVTLAVYTFFFACLIGRQFLDPTKGYVGHDLDLYVPIFTLLQFFFYAGWLKVAEQLINPFGEDDDDFETNWCIDRNLQVSLLAVDEMHMSLPKMKKDIYWDDSAARPPYTLAAADYCIPSFLGSTIQMGL 368
BLAST of best1_pig ame: full vs. SwissProt
Match: gi|38503351|sp|Q8N1M1.1|BEST3_HUMAN (RecName: Full=Bestrophin-3; AltName: Full=Vitelliform macular dystrophy 2-like protein 3) HSP 1 Score: 92.0485 bits (227), Expect = 8.269e-19 Identity = 53/155 (34.19%), Postives = 72/155 (46.45%), Query Frame = 0 Query: 30 LNLKRARIAQLFPLVTGHRDLNYFSVVTLAVYSFLLSTLMGRQFLDPSKKHLGHEVDLVVPVFTFLQFFFYMGWLK--------------------------------------EHPPMVRDQFWDDIFPELPYTAATEESRIDPDIGAATQIDI 146 +N R+ + LF L Y VVTLAVY+F + L+GRQFLDP+K + GH++DL +P+FT LQFFFY GWLK P M +D +WDD PYT A + I +G+ Q+ + Sbjct: 214 MNRYRSWCSLLFGYDWVGIPLVYTQVVTLAVYTFFFACLIGRQFLDPTKGYAGHDLDLYIPIFTLLQFFFYAGWLKVAEQLINPFGEDDDDFETNWCIDRNLQVSLLAVDEMHMSLPKMKKDIYWDDSAARPPYTLAAADYCIPSFLGSTVQMGL 368
BLAST of best1_pig ame: full vs. SwissProt
Match: gi|38503353|sp|Q8NFU1.1|BEST2_HUMAN (RecName: Full=Bestrophin-2; AltName: Full=Vitelliform macular dystrophy 2-like protein 1) HSP 1 Score: 87.4261 bits (215), Expect = 2.402e-17 Identity = 68/227 (29.96%), Postives = 105/227 (46.26%), Query Frame = 0 Query: 28 EILNLKRARIAQLFPLVTGHRDLNYFSVVTLAVYSFLLSTLMGRQFLDPSKKHLGHEVDLVVPVFTFLQFFFYMGWLKEHPPMVRDQFWDDIFPELPYTAATEESRIDPDIGAATQIDICEVEAEF--LPLLEEDVLSAQIRSRS--------QSRNRRMSSS----TLGMKDLE-EAESGLSKPEEESSNSMMSFIQTITSSIGQAASDKLGSPLGILSSKRSHRS 239 E LN+ R + LF L Y VVT+A+YS+ L+ L+GRQFLDP++ + H++DL VP+FT LQFFFY GWLK ++ P+ ++ + I Q+ + V+ + L +LE+D+ +R+ Q R S TL +D++ + GL P E+ + + + + G A LG L L K S S Sbjct: 212 EELNVFRGKCGMLFHYDWISVPLVYTQVVTIALYSYFLACLIGRQFLDPAQGYKDHDLDLCVPIFTLLQFFFYAGWLKVAEQLIN-----------PFGEDDDDFETNFLIDRNFQVSMLAVDEMYDDLAVLEKDLYWDAAEARAPYTAATVFQLRQPSFQGSTFDITLAKEDMQFQRLDGLDGPMGEAPGDFLQ--RLLPAGAGMVAGGPLGRRLSFLLRKNSCVS 425
BLAST of best1_pig ame: full vs. SwissProt
Match: gi|38503324|sp|Q8BGM5.1|BEST2_MOUSE (RecName: Full=Bestrophin-2; AltName: Full=Vitelliform macular dystrophy 2-like protein 1) HSP 1 Score: 86.2705 bits (212), Expect = 5.529e-17 Identity = 41/78 (52.56%), Postives = 53/78 (67.95%), Query Frame = 0 Query: 28 EILNLKRARIAQLFPLVTGHRDLNYFSVVTLAVYSFLLSTLMGRQFLDPSKKHLGHEVDLVVPVFTFLQFFFYMGWLK 105 E LN+ R++ LF L Y VVT+AVYS+ L+ L+GRQFLDP++ + H +DL VP+FT LQFFFY GWLK Sbjct: 212 EELNVFRSKCGMLFHYDWISIPLVYTQVVTIAVYSYFLACLIGRQFLDPAQGYKDHTLDLCVPIFTLLQFFFYAGWLK 289
BLAST of best1_pig ame: full vs. SwissProt
Match: gi|38503352|sp|Q8NFU0.1|BEST4_HUMAN (RecName: Full=Bestrophin-4; AltName: Full=Vitelliform macular dystrophy 2-like protein 2) HSP 1 Score: 71.2478 bits (173), Expect = 3.465e-12 Identity = 55/168 (32.74%), Postives = 71/168 (42.26%), Query Frame = 0 Query: 28 EILNLKRARIAQLFPLVTGHRDLNYFSVVTLAVYSFLLSTLMGRQFLDP------SKKHL--GHE-------VDLVVPVFTFLQFFFYMGWLK--------------------------------------EHPPMVRDQFWDDIFPELPYTAATEESRIDPDIGAAT 142 E LN RA+ + LF L Y VVT+AVYSF +L+GRQF++P +K L G E D+ VP+ T LQFFFY GWLK PP +DQ+WD+ P+ PYT AT + P +T Sbjct: 212 EELNKYRAKCSMLFHYDWISIPLVYTQVVTIAVYSFFALSLVGRQFVEPEAGAAKPQKLLKPGQEPAPALGDPDMYVPLTTLLQFFFYAGWLKVAEQIINPFGEDDDDFETNQLIDRNLQVSLLSVDEMYQNLPPAEKDQYWDEDQPQPPYTVATAAESLRPSFLGST 379
BLAST of best1_pig ame: full vs. SwissProt
Match: gi|6137288|sp|O45435.1|BST13_CAEEL (RecName: Full=Bestrophin homolog 13) HSP 1 Score: 61.2326 bits (147), Expect = 4.543e-9 Identity = 31/56 (55.36%), Postives = 36/56 (64.29%), Query Frame = 0 Query: 50 LNYFSVVTLAVYSFLLSTLMGRQFLDPSKKHLGHEVDLVVPVFTFLQFFFYMGWLK 105 L Y V LA YSF TL GRQ L P + G E+DLVVPVFT +QF F++GW K Sbjct: 236 LVYTQVAALATYSFFFFTLFGRQPLFPDIE-TGKELDLVVPVFTIVQFLFFVGWFK 290
BLAST of best1_pig ame: full vs. nr
Match: gi|1355965076|gb|PRD23428.1| (Bestrophin-1 [Nephila clavipes]) HSP 1 Score: 134.42 bits (337), Expect = 2.329e-31 Identity = 83/250 (33.20%), Postives = 124/250 (49.60%), Query Frame = 0 Query: 25 VVDEILNLKRARIAQLFPLVTGHRDLNYFSVVTLAVYSFLLSTLMGRQFLDPSKKHLGHEVDLVVPVFTFLQFFFYMGWLK--------------------------------------EHPPMVRDQFWDDIFPELPYTAATEESRIDPDIGAATQIDICEVEAEFLPL---LEEDVLSAQIRSRSQSRNRRMSSSTLGMKDLEEAESGLSKPEEESSNSMMSFIQTITSS------IGQAASDKLGSP 227 ++DE +++ R LF L Y VVTLA+Y++ L+T+MGRQ+LDP K + GHEVDL +P+FT LQFFFYMGWLK +HP +V+D +WD+I P+LPYT ++ R P +G+A +DI E EFLP+ LEED S QS +S + + + ++ L+ + +S S + F++ S IG + + G+P Sbjct: 48 LLDE-MHIFRGNCGMLFSYDWVSIPLVYTQVVTLAIYTYFLATVMGRQYLDPEKGYPGHEVDLYIPIFTILQFFFYMGWLKVAEQLINPFGEDDDDFELNWCLDRNLQVSFMIVDEMHHKHPRLVKDMYWDEIEPQLPYTKSSFMMRTQPHLGSAVNLDIDPEECEFLPMETILEEDNDDNNYNSPPQSPTNELSPA---FRSIAGSKINLNGDCDNTSQSGLRFLENFPGSKLLNMIIGSSTENVPGTP 293
BLAST of best1_pig ame: full vs. nr
Match: gi|242023044|ref|XP_002431946.1| (Bestrophin-2, putative [Pediculus humanus corporis] >gi|212517297|gb|EEB19208.1| Bestrophin-2, putative [Pediculus humanus corporis]) HSP 1 Score: 137.502 bits (345), Expect = 2.604e-31 Identity = 94/266 (35.34%), Postives = 132/266 (49.62%), Query Frame = 0 Query: 50 LNYFSVVTLAVYSFLLSTLMGRQFLDPSKKHLGHEVDLVVPVFTFLQFFFYMGWLK--------------------------------------EHPPMVRDQFWDDIFP-ELPYTAATEESRIDPDIGAATQIDICEVEAEFLPL---LE---------EDVLSAQIRSRSQSRNRRMSSSTLGMKDLEEAESGLSKPEEESSNSMMSFIQTITSSIGQAASDK-----LGSPLGILSSKRSHRSFAKRMRRAQRLSGRSSRSYL 259 L Y VVTLAVY F LSTLMG Q+LDPSK + H++DL +PVFTFLQFFFYMGWLK EHP M++DQ+WD++FP ELPYTAA ++ P +A ++++ +AEF+PL LE E+++S++ S + M L ++ E SG S+P SS S + ++ Q S K LGS L S+R ++S R+ G+S S++ Sbjct: 237 LVYTQVVTLAVYVFFLSTLMGNQYLDPSKGYAKHQIDLFLPVFTFLQFFFYMGWLKVAESLVNPFGEDDDDFELNWLLDRNLQISYVIVDEMHQEHPEMLKDQYWDEVFPVELPYTAAAKQYHTGPPQHSAEEVEVPSHQAEFMPLDTVLEEKEGSKMNIEEIISSEHPSVQRGETHPMKIQRLSLRPSRENNSG-SEPSTMSSKGKSSVLNLLSKIFHQKRSSKEEVIHLGSSAS-LRSRRGNKS-TSRLSSTSHSMGQSRSSFV 499
BLAST of best1_pig ame: full vs. nr
Match: gi|1192748407|ref|XP_015926700.2| (bestrophin-2-like [Parasteatoda tepidariorum]) HSP 1 Score: 128.257 bits (321), Expect = 4.159e-29 Identity = 70/171 (40.94%), Postives = 92/171 (53.80%), Query Frame = 0 Query: 50 LNYFSVVTLAVYSFLLSTLMGRQFLDPSKKHLGHEVDLVVPVFTFLQFFFYMGWLK--------------------------------------EHPPMVRDQFWDDIFPELPYTAATEESRIDPDIGAATQIDICEVEAEFLPL-------LEEDVLSAQIRSRSQSRNR 175 L Y VVTL VY+F LSTLMGRQ+LDP++ H G++VDL +PVF FLQFFFYMGWLK EHP +++DQ+WD+ P+LPYTAA +P +G+A + I EAEF+PL LE+ ++A + RNR Sbjct: 235 LVYTQVVTLVVYTFFLSTLMGRQYLDPAQGHPGYDVDLYIPVFNFLQFFFYMGWLKVAETLVNPFGEDDDDFEVNWVIDRDIQVSYLIVDEMHQEHPELIKDQYWDETLPDLPYTAAAMPFYSEPPMGSAANLVIPPHEAEFVPLETLDEDELEDIKINAIPYEKGDMRNR 405
BLAST of best1_pig ame: full vs. nr
Match: gi|1012271564|ref|XP_015983411.1| (PREDICTED: bestrophin-1 isoform X4 [Rousettus aegyptiacus]) HSP 1 Score: 127.487 bits (319), Expect = 1.886e-28 Identity = 71/158 (44.94%), Postives = 94/158 (59.49%), Query Frame = 0 Query: 15 KLWVKGPRAD------VVDEILNLKRARIAQLFPLVTGHRDLNYFSVVTLAVYSFLLSTLMGRQFLDPSKKHLGHEVDLVVPVFTFLQFFFYMGWLK-----------EHPPMVRDQFWDDIFPELPYTAATEESRIDPDIGAATQIDICEVEAEFLP 155 K W+ G D +++E +N R + QL+ L Y VVT+AVYSF L+ L+GRQFL+P+K + GHE+DLVVPVFTFLQFFFY GWLK + PPM RD +W+D P+ PYTAA+ +SR G+ I + + E EF P Sbjct: 194 KAWIGGRIRDPVLLQSLLNE-MNTLRTQCGQLYAYDWISVPLVYTQVVTVAVYSFFLACLVGRQFLNPAKAYPGHEMDLVVPVFTFLQFFFYAGWLKVSLLAVDEMHQDLPPMERDMYWNDPEPQPPYTAASAQSRRPSFFGSTFNISLHKEEMEFQP 350
BLAST of best1_pig ame: full vs. nr
Match: gi|1012271560|ref|XP_015983409.1| (PREDICTED: bestrophin-1 isoform X2 [Rousettus aegyptiacus]) HSP 1 Score: 127.872 bits (320), Expect = 2.403e-28 Identity = 66/137 (48.18%), Postives = 85/137 (62.04%), Query Frame = 0 Query: 30 LNLKRARIAQLFPLVTGHRDLNYFSVVTLAVYSFLLSTLMGRQFLDPSKKHLGHEVDLVVPVFTFLQFFFYMGWLK-----------EHPPMVRDQFWDDIFPELPYTAATEESRIDPDIGAATQIDICEVEAEFLP 155 +N R + QL+ L Y VVT+AVYSF L+ L+GRQFL+P+K + GHE+DLVVPVFTFLQFFFY GWLK + PPM RD +W+D P+ PYTAA+ +SR G+ I + + E EF P Sbjct: 269 MNTLRTQCGQLYAYDWISVPLVYTQVVTVAVYSFFLACLVGRQFLNPAKAYPGHEMDLVVPVFTFLQFFFYAGWLKVSLLAVDEMHQDLPPMERDMYWNDPEPQPPYTAASAQSRRPSFFGSTFNISLHKEEMEFQP 405
BLAST of best1_pig ame: full vs. nr
Match: gi|594037833|ref|XP_006043542.1| (PREDICTED: bestrophin-1 isoform X3 [Bubalus bubalis]) HSP 1 Score: 127.487 bits (319), Expect = 2.645e-28 Identity = 72/163 (44.17%), Postives = 97/163 (59.51%), Query Frame = 0 Query: 14 TKLWVKGPRAD------VVDEILNLKRARIAQLFPLVTGHRDLNYFSVVTLAVYSFLLSTLMGRQFLDPSKKHLGHEVDLVVPVFTFLQFFFYMGWLK-----------EHPPMVRDQFWDDIFPELPYTAATEESRIDPDIGAATQIDICEVEAEFLPLLEE 159 TK W+ G D +++E +N R + QL+ L Y VVT+AVYSF L+ L+GRQFL+P+K + GHE+DLVVP+FTFLQFFFY GWLK + PPM RD +W++ P PYTAA+ +SR G+ I + + + EF P LEE Sbjct: 193 TKAWIGGRIRDPILLQSLLNE-MNTLRTQCGQLYAYDWISIPLVYTQVVTVAVYSFFLACLIGRQFLNPAKAYPGHEMDLVVPLFTFLQFFFYAGWLKVSLLAVDEMHQDLPPMERDMYWNEPEPHPPYTAASAQSRRPSFFGSTFNISLDKEDMEFQPDLEE 354
BLAST of best1_pig ame: full vs. nr
Match: gi|1316204195|ref|XP_023212454.1| (bestrophin-2-like isoform X2 [Centruroides sculpturatus]) HSP 1 Score: 127.872 bits (320), Expect = 3.365e-28 Identity = 86/250 (34.40%), Postives = 121/250 (48.40%), Query Frame = 0 Query: 25 VVDEILNLKRARIAQLFPLVTGHRDLNYFSVVTLAVYSFLLSTLMGRQFLDPSKKHLGHEVDLVVPVFTFLQFFFYMGWLK--------------------------------------EHPPMVRDQFWDDIFPELPYTAATEESRIDPDIGAATQIDICEVEAEFLPL--LEE----------DVLSAQIR-SRSQSRNRRMSSSTLGMKDLEEAESGLSKPEEESSNSMMSFIQTITS--SIGQAAS 221 VVD I N RA L L Y VVTL VY+F L++LMG+Q+LDP++ + GH+VDL VPVF FLQFFFYMGWLK EHP +++DQ+WD+I ELPYTAA P G+A + + E AEF+P+ LEE D + + ++S ++R+S S M+ +G P + +++S + + + SIG AS Sbjct: 211 VVDAIANY-RALCGGLLNYDWISIPLVYTQVVTLVVYTFFLASLMGQQYLDPAQGYQGHQVDLYVPVFNFLQFFFYMGWLKVAETLVNPFGEDDDDFEVNWVIDRDIQVSYLIVDEMHQEHPELIKDQYWDEIMTELPYTAAAMPFHTGPPQGSAAAVTVPEKLAEFVPMEPLEETPDEPYVEVTDTCTMPMNTTQSHLLSQRLSGS---MQSSISGLAGPYHPHSQQKKNILSMLHKLFTKESIGSNAS 456
BLAST of best1_pig ame: full vs. nr
Match: gi|1316204187|ref|XP_023212450.1| (bestrophin homolog 17-like isoform X1 [Centruroides sculpturatus] >gi|1316204189|ref|XP_023212451.1| bestrophin homolog 17-like isoform X1 [Centruroides sculpturatus] >gi|1316204191|ref|XP_023212452.1| bestrophin homolog 17-like isoform X1 [Centruroides sculpturatus] >gi|1316204193|ref|XP_023212453.1| bestrophin homolog 17-like isoform X1 [Centruroides sculpturatus]) HSP 1 Score: 127.872 bits (320), Expect = 3.899e-28 Identity = 86/250 (34.40%), Postives = 121/250 (48.40%), Query Frame = 0 Query: 25 VVDEILNLKRARIAQLFPLVTGHRDLNYFSVVTLAVYSFLLSTLMGRQFLDPSKKHLGHEVDLVVPVFTFLQFFFYMGWLK--------------------------------------EHPPMVRDQFWDDIFPELPYTAATEESRIDPDIGAATQIDICEVEAEFLPL--LEE----------DVLSAQIR-SRSQSRNRRMSSSTLGMKDLEEAESGLSKPEEESSNSMMSFIQTITS--SIGQAAS 221 VVD I N RA L L Y VVTL VY+F L++LMG+Q+LDP++ + GH+VDL VPVF FLQFFFYMGWLK EHP +++DQ+WD+I ELPYTAA P G+A + + E AEF+P+ LEE D + + ++S ++R+S S M+ +G P + +++S + + + SIG AS Sbjct: 211 VVDAIANY-RALCGGLLNYDWISIPLVYTQVVTLVVYTFFLASLMGQQYLDPAQGYQGHQVDLYVPVFNFLQFFFYMGWLKVAETLVNPFGEDDDDFEVNWVIDRDIQVSYLIVDEMHQEHPELIKDQYWDEIMTELPYTAAAMPFHTGPPQGSAAAVTVPEKLAEFVPMEPLEETPDEPYVEVTDTCTMPMNTTQSHLLSQRLSGS---MQSSISGLAGPYHPHSQQKKNILSMLHKLFTKESIGSNAS 456
BLAST of best1_pig ame: full vs. nr
Match: gi|926625979|ref|XP_013778511.1| (bestrophin-4-like [Limulus polyphemus]) HSP 1 Score: 125.946 bits (315), Expect = 1.066e-27 Identity = 61/152 (40.13%), Postives = 88/152 (57.89%), Query Frame = 0 Query: 50 LNYFSVVTLAVYSFLLSTLMGRQFLDPSKKHLGHEVDLVVPVFTFLQFFFYMGWLK--------------------------------------EHPPMVRDQFWDDIFPELPYTAATEESRIDPDIGAATQIDICEVEAEFLPL---LEED 160 L Y VVTLA+Y++ ++++MGRQ+LDP K++ G+EVDL +P+FT LQFFFYMGWLK HP +++DQ+WD++ P+LPYT ++ R P +G+A +DI EAEF+P+ LEED Sbjct: 234 LVYTQVVTLAIYTYFIASVMGRQYLDPDKRYPGYEVDLYIPIFTILQFFFYMGWLKVAEQLINPFGEDDDDFELNWCLDRNLVISFLIVDEMCQRHPRLIKDQYWDELEPQLPYTKSSFALRTQPHLGSAVNLDINPEEAEFVPMETILEED 385
BLAST of best1_pig ame: full vs. nr
Match: gi|1316191724|ref|XP_023241704.1| (bestrophin-2-like isoform X1 [Centruroides sculpturatus] >gi|1316191726|ref|XP_023241705.1| bestrophin-2-like isoform X1 [Centruroides sculpturatus]) HSP 1 Score: 125.561 bits (314), Expect = 1.404e-27 Identity = 59/145 (40.69%), Postives = 83/145 (57.24%), Query Frame = 0 Query: 50 LNYFSVVTLAVYSFLLSTLMGRQFLDPSKKHLGHEVDLVVPVFTFLQFFFYMGWLK--------------------------------------EHPPMVRDQFWDDIFPELPYTAATEESRIDPDIGAATQIDICEVEAEFLPL 156 L Y VVTLA+Y++ L+T+MGRQ+LDP K + GHEVDL +P+FT LQFFFYMGWLK +HP +++D +WD++ P+LPYT ++ R P +G+A +DI EAEF+P+ Sbjct: 234 LVYTQVVTLAIYTYFLATVMGRQYLDPEKGYPGHEVDLYIPIFTILQFFFYMGWLKVAEQLINPFGEDDDDFELNWCLDRNLQVSFMIVDEMHRKHPKLIKDTYWDELEPQLPYTKSSVNLRSQPHLGSAINLDINLEEAEFVPM 378 The following BLAST results are available for this feature:
BLAST of best1_pig ame: full vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of best1_pig ame: full vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 10
BLAST of best1_pig ame: full vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold251_size238241:201970..209455+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold251_size238241-processed-gene-1.5 ID=snap_masked-scaffold251_size238241-processed-gene-1.5|Name=best1_pig ame: full|organism=Tigriopus kingsejongensis|type=gene|length=7486bp|location=Sequence derived from alignment at scaffold251_size238241:201970..209455+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'best1_pig ame: full' has the following synonyms
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