wd repeat and sof domain-containing protein 1, snap_masked-scaffold25_size650667-processed-gene-1.1 (gene) Tigriopus kingsejongensis

Overview


Name	wd repeat and sof domain-containing protein 1
Unique Name	snap_masked-scaffold25_size650667-processed-gene-1.1
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. L. salmonis genes
Match: EMLSAG00000004181 (supercontig:LSalAtl2s:LSalAtl2s220:848:70420:-1 gene:EMLSAG00000004181 transcript:EMLSAT00000004181 description:"maker-LSalAtl2s220-augustus-gene-0.18")

HSP 1 Score: 425.246 bits (1092), Expect = 1.362e-142
Identity = 191/288 (66.32%), Postives = 241/288 (83.68%), Query Frame = 0

Query:    1 MLTGISHQRNKPMFATCGEATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPLKERQKSALEYNEKLKEKYGSHPQVRRIARNRHVPKHVLNAKKEHQVIRESKKRKEANRRLHSKPGSVPYVSERDKHVIEEQE 288
            +L GISH R++  FATCG++T LW +     ++E+ WGVDSIH ++FN  + +IL ACASDRSI+LYD+RE NPMRKV ++LKSN++AWNPME  +F VANEDYN YAFD+R L +P+ VHMDH +AVI +DY+PTG+E+V+G+YDKTIRIF   EG SRE+YHTKRMQRLTSV WS DNKYI+SGSDEMNIRLWK+KA EKLG LK+RQ+SAL+YNEKLKEKYG++PQ++RIA+++ VP+H+LNA+ EHQ I+ SKKRK+ANRR HS PG VPY SERDKH + + E
Sbjct:  158 ILNGISHHRSEDKFATCGDSTCLWQAGRNVPLREFHWGVDSIHHVRFNMVQENILAACASDRSIILYDIREANPMRKVFLELKSNSLAWNPMEAMIFTVANEDYNCYAFDLRKLERPINVHMDHVSAVIDIDYAPTGRELVTGSYDKTIRIFNVREGHSREIYHTKRMQRLTSVRWSLDNKYIISGSDEMNIRLWKAKASEKLGVLKDRQRSALQYNEKLKEKYGNYPQIKRIAKHKKVPRHILNARAEHQTIKSSKKRKDANRRKHSAPGKVPYTSERDKHTLMDNE 445

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. L. salmonis genes
Match: EMLSAG00000011858 (supercontig:LSalAtl2s:LSalAtl2s832:38825:40850:-1 gene:EMLSAG00000011858 transcript:EMLSAT00000011858 description:"maker-LSalAtl2s832-augustus-gene-0.19")

HSP 1 Score: 68.5514 bits (166), Expect = 3.330e-13
Identity = 37/134 (27.61%), Postives = 73/134 (54.48%), Query Frame = 0

Query:   19 EATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKS------NAMAWNPMEPFVFAVANEDYNLYAFDIRNL--RKPLLVHMDHTAAVICLDYSPTGKEIVSGA 144
            E  S WN + ++++       DS+ DIQ++P E +++ +C++D+SI ++DVR R P +  ++ +        N + WN  EPF+ +   +D  +  +D+R++  R P+     HT  V  +++ PT   + + A
Sbjct:  251 ETGSTWNVDQRSLIGHR----DSVEDIQWSPNEANVMASCSTDKSIRIWDVRAR-PDKACMLTVDKAHQSDVNVINWNRSEPFIVS-GGDDGAIKVWDLRHIDKRTPVATFKHHTQPVTSVEWHPTDATVFASA 378

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. L. salmonis genes
Match: EMLSAG00000009105 (supercontig:LSalAtl2s:LSalAtl2s573:267932:269786:1 gene:EMLSAG00000009105 transcript:EMLSAT00000009105 description:"maker-LSalAtl2s573-augustus-gene-2.14")

HSP 1 Score: 53.9138 bits (128), Expect = 1.350e-8
Identity = 41/189 (21.69%), Postives = 88/189 (46.56%), Query Frame = 0

Query:   21 TSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKS-NAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVH--MDHTAAVICLDYSPTGKE---------IVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKS 197
            T +W+S+     Q++ +    I D+ +   E+    +C+ D+ I +  +    P++         +++ W+P   F+ + +N+        +  + K   VH    H+ A+  + +S TG           +VS +YD T+R++  + G       T+  + ++SVA+S D K++ SGS +  + +W +
Sbjct:  139 TIIWDSQTGNHNQQFAFHSAPILDVDWQTDES--FASCSKDKCIHVCKLGVEKPIKSFYGHTNEVHSIKWDPQGKFLASGSNDT----TLKVWCMDKESHVHDLKAHSKAIYTIKWSCTGPGTNNPNADLVLVSASYDSTVRLWDVERGSCLHTL-TRHQETVSSVAFSPDGKFLASGSYDKFVYIWST 320

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. L. salmonis genes
Match: EMLSAG00000006041 (supercontig:LSalAtl2s:LSalAtl2s327:367648:370815:1 gene:EMLSAG00000006041 transcript:EMLSAT00000006041 description:"maker-LSalAtl2s327-augustus-gene-3.42")

HSP 1 Score: 53.1434 bits (126), Expect = 2.085e-8
Identity = 39/143 (27.27%), Postives = 72/143 (50.35%), Query Frame = 0

Query:   66 LYDVRERNPMRKVVMD-LKSNAMAWNPMEPFVFAVANED-YNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPL 206
            ++DV +   +R +    L +  +A++P    + + AN    N+Y  +    ++ LL        ++ + YSP GK I SGA D  I IF    G+         +  + S+A+SKD+K +L+GSD+ +++L++      +G L
Sbjct:   92 IWDVEKATKLRSIESSPLDAWTVAFSPDSETLISGANAGKVNIYCVETGQNKQQLL--DTRGKFILSIAYSPDGKYIASGATDGIINIFSMPTGKQXHALEGHALP-IRSLAFSKDSKRLLTGSDDGHMKLYEVSHGSLIGTL 231

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. L. salmonis genes
Match: EMLSAG00000005728 (supercontig:LSalAtl2s:LSalAtl2s309:717547:718847:-1 gene:EMLSAG00000005728 transcript:EMLSAT00000005728 description:"augustus_masked-LSalAtl2s309-processed-gene-7.10")

HSP 1 Score: 52.373 bits (124), Expect = 5.316e-8
Identity = 44/179 (24.58%), Postives = 85/179 (47.49%), Query Frame = 0

Query:   26 SEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYD---VRERNPMRKVVMDLKSNAMAWNPMEPFVF-AVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHT----KRMQRLTSVAWSKDNKYILSGSDEMNIRLWK 196
            SE   +++     VD +  ++F+P ET IL + + D +I L+D      +   R ++      +++++P   F+     +    LY  +        + H  HT+ V  + +S  GK   S + D +I+I+   +G S +V +T         + SV ++++ KYILS   +  I+LW+
Sbjct:  173 SEGHPVIRTLYDHVDEVTCLEFHPKET-ILASGSKDNTIKLFDYSKASAKKACRTIIDAEPVQSLSFHPSGDFLLVGCEHPVVRLYDVNTSQCFVSSIPHQRHTSEVTMVKFSNDGKIYASSSTDGSIKIW---DGVSSKVINTFDEAHDGAEVCSVYFTRNGKYILSSGKDSLIKLWE 347

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. L. salmonis genes
Match: EMLSAG00000002001 (supercontig:LSalAtl2s:LSalAtl2s135:125525:127362:1 gene:EMLSAG00000002001 transcript:EMLSAT00000002001 description:"maker-LSalAtl2s135-snap-gene-1.13")

HSP 1 Score: 48.9062 bits (115), Expect = 2.106e-7
Identity = 39/119 (32.77%), Postives = 59/119 (49.58%), Query Frame = 0

Query:   87 MAWNPMEPFVFAVANEDYNLYAF----DIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVY--HTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKA 199
            +A NP  P +   A+ D +L  +    D  N   P      H   V     S  G   +SG++DKT+R++    G+S   +  HTK +    SVA+S DN+ I+SGS +  I+LW + A
Sbjct:   21 IATNPKFPEMILSASRDKSLIVWKLTRDEANFGIPQKRLHGHNHFVSDXVLSHDGHFALSGSWDKTLRLWDLSAGKSTRRFEDHTKDVM---SVAFSSDNRQIVSGSRDKTIKLWNTLA 136

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. L. salmonis genes
Match: EMLSAG00000001111 (supercontig:LSalAtl2s:LSalAtl2s1186:117586:119588:-1 gene:EMLSAG00000001111 transcript:EMLSAT00000001111 description:"maker-LSalAtl2s1186-snap-gene-1.40")

HSP 1 Score: 49.2914 bits (116), Expect = 5.773e-7
Identity = 23/84 (27.38%), Postives = 50/84 (59.52%), Query Frame = 0

Query:  124 HTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPLK 207
            HT  V  + +SP G+ + S + DK I+++ + +G+  +     ++  ++ VAWS D++ ++S SD+  +++W+  + + L  LK
Sbjct:   29 HTKGVSAVKFSPNGEWLASSSADKLIKVWGSYDGKFEKTISGHKLG-ISDVAWSSDSRLLVSASDDKTLKIWELSSGKCLKTLK 111

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. L. salmonis genes
Match: EMLSAG00000004683 (supercontig:LSalAtl2s:LSalAtl2s245:245484:249637:1 gene:EMLSAG00000004683 transcript:EMLSAT00000004683 description:"augustus_masked-LSalAtl2s245-processed-gene-2.4")

HSP 1 Score: 48.9062 bits (115), Expect = 7.012e-7
Identity = 50/228 (21.93%), Postives = 101/228 (44.30%), Query Frame = 0

Query:   10 NKPMFATCGEATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDL-KSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQ--SR-EVYH--TKRMQRLTSVAWSKDNKYILS---GSDEMNIRLWKSKAWEKLGPLKER-QKSALEYNEKLKEKYGSH 227
            N  +  + G    LWN++   I Q  Q   +++        E + L    ++  + L+D+     +R +     + ++++WN    ++ +  +    ++  D+R  +  +   + HT  V  L +S  G+ + SGA D T+ I+   +G+  SR +  H  T+    + +VAW     ++L+   G+    I+LW       L  +  + Q  AL ++ + KE   SH
Sbjct:  194 NNHLAVSLGSQVFLWNADNGEIKQLLQLADENVICSVKWIKEGNFLSVGTTNAELHLWDIEAEKRVRLLTSHTDRVSSLSWNS---YILSSGSRSGQIHHSDVRVAQHHIASSLYHTQEVCGLAWSHNGRYLASGANDNTLNIWDAAQGECYSRPDPLHTFTQHQAAVKAVAWCPWQPHVLASGGGTAXRCIKLWNCNNGTLLNSIDSKSQVCALLWSSEYKELVSSH 418

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. L. salmonis genes
Match: EMLSAG00000009719 (supercontig:LSalAtl2s:LSalAtl2s627:20682:23106:-1 gene:EMLSAG00000009719 transcript:EMLSAT00000009719 description:"snap_masked-LSalAtl2s627-processed-gene-0.29")

HSP 1 Score: 48.9062 bits (115), Expect = 7.544e-7
Identity = 25/103 (24.27%), Postives = 51/103 (49.51%), Query Frame = 0

Query:   96 VFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSK 198
            +    ++D+ L+ +     +K       H   V  + +SP  + I S ++DK+IR++    G+    +    +Q +  +AW  D++ I+SGS +  ++LW  K
Sbjct:  361 ILVSGSDDFTLFLWKPETDKKSYARLTGHQQTVNDVKFSPDARYIASASFDKSIRLWDGRTGKFMAXFR-GHVQAVYQLAWXLDSRLIVSGSADSTVKLWSVK 462

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. L. salmonis genes
Match: EMLSAG00000002459 (supercontig:LSalAtl2s:LSalAtl2s1472:24513:26207:-1 gene:EMLSAG00000002459 transcript:EMLSAT00000002459 description:"maker-LSalAtl2s1472-snap-gene-0.16")

HSP 1 Score: 48.9062 bits (115), Expect = 8.022e-7
Identity = 35/174 (20.11%), Postives = 79/174 (45.40%), Query Frame = 0

Query:   42 IHDIQFNPTETHILGACASDRSILLYDVRERN---PMRKV-VMDLKSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIV-SGAYDKTIRIF---QTDEGQSRE----------VYHTKRMQRLTSVAWSKDNKYILSGSDEMNI-RLWK 196
            + D+ ++     + G+ A D+ ++++D R      P   V     + N +++NP   F+ A  + D  +  +D+RNL+  L     H   +  + +SP  + I+ S   D+ + ++   +  E QS E            H     +++  +W+ ++ +++    E NI ++W+
Sbjct:  326 VEDVAWHLLHEXLFGSVADDQKLMIWDTRSATHNKPSHTVDAHAAEVNCLSFNPYSEFILASGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNDPWVICSVSEDNIMQVWQ 499

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. SwissProt
Match: gi|82233900|sp|Q5ZLK1.1|DCA13_CHICK (RecName: Full=DDB1- and CUL4-associated factor 13; AltName: Full=WD repeat and SOF domain-containing protein 1)

HSP 1 Score: 369.777 bits (948), Expect = 3.336e-126
Identity = 158/282 (56.03%), Postives = 220/282 (78.01%), Query Frame = 0

Query:    3 TGISHQRNKPMFATCGEATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPLKERQKSALEYNEKLKEKYGSHPQVRRIARNRHVPKHVLNAKKEHQVIRESKKRKEANRRLHSKPGSVPYVSERDKHVI 284
            TGI H     +FATCG+   +W+ +  + +    WG DSI  ++FNP ET++LG+CASDR+I+LYD+R+  P++KV++++++N + WNPME F+F  ANEDYNLY FD+R L  P++VHMDH +AV+ +DYSPTGKE VS ++DK++RIF  D+G SREVYHTKRMQ + +V W+ D++YIL GSDEMNIRLWK+ A EKLG L  R+K+A+ YN+KLKEK+  HPQ++RIAR+RH+PK +    KE +++RE+++RKE NRR HSKPGSVP VSE+ KH++
Sbjct:  160 TGIDHHWKDAVFATCGQQVDIWDEQRTSPMCSLTWGFDSISSVKFNPIETYLLGSCASDRNIVLYDMRQSTPLKKVILNMRTNTLCWNPMEAFIFTAANEDYNLYTFDMRFLTSPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSVRIFPVDKGHSREVYHTKRMQHVITVKWTSDSRYILCGSDEMNIRLWKANASEKLGVLAPREKAAMNYNQKLKEKFQHHPQIKRIARHRHLPKSIYCQIKEQRIMREARRRKELNRRKHSKPGSVPVVSEKKKHIV 441

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. SwissProt
Match: gi|341940425|sp|Q6PAC3.2|DCA13_MOUSE (RecName: Full=DDB1- and CUL4-associated factor 13; AltName: Full=WD repeat and SOF domain-containing protein 1)

HSP 1 Score: 366.311 bits (939), Expect = 6.532e-125
Identity = 161/284 (56.69%), Postives = 219/284 (77.11%), Query Frame = 0

Query:    1 MLTGISHQRNKPMFATCGEATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPLKERQKSALEYNEKLKEKYGSHPQVRRIARNRHVPKHVLNAKKEHQVIRESKKRKEANRRLHSKPGSVPYVSERDKHVI 284
            + TGI H    P+FATCG+   +W+ +  + V    WG DSI  ++FNP ET +LG+CASDR+I+LYD+R+  P++KV++++++N + WNPME F F  ANEDYNLY FD+R L  P++VHMDH +AV+ +DYSPTGKE VS ++DK+IRIF  D+ +SREVYHTKRMQ +  V W+ D+KYI+ GSDEMNIRLWK+ A EKLG L  R+K+A +YN+KLKEK+  HP V+RIAR+RH+PK + +  +E +V++E+++RKE NRR HSKPGSVP VSER KHV+
Sbjct:  158 VYTGIDHHWKDPVFATCGQQVDIWDEQRTSPVCSMNWGFDSISSVKFNPVETFLLGSCASDRNIVLYDMRQATPLKKVILEMRTNTICWNPMEAFNFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVMCVKWTSDSKYIMCGSDEMNIRLWKANASEKLGVLTSREKAANDYNQKLKEKFQYHPHVKRIARHRHLPKSIYSQIQEQRVMKEARRRKEMNRRKHSKPGSVPIVSERKKHVV 441

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. SwissProt
Match: gi|82241891|sp|Q803X4.1|DCA13_DANRE (RecName: Full=DDB1- and CUL4-associated factor 13; AltName: Full=WD repeat and SOF domain-containing protein 1)

HSP 1 Score: 363.614 bits (932), Expect = 7.661e-124
Identity = 162/288 (56.25%), Postives = 217/288 (75.35%), Query Frame = 0

Query:    1 MLTGISHQRNKPMFATCGEATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPLKERQKSALEYNEKLKEKYGSHPQVRRIARNRHVPKHVLNAKKEHQVIRESKKRKEANRRLHSKPGSVPYVSERDKHVIEEQE 288
            + TGI H + +  F TCG+   +W+ +  + V  + WGVDS   +++NP E  +L +CASDRSI+LYD RE  P+RKV+M L+SN + WNPME + F  ANEDYNLY +DIRNL  P+ VHMDH +AV+ +DYSPTG+E VS ++DKTIRIF  D+G SREVYHTKRMQ +  V WS D+K+I+SGSDEMNIRLWK+ A EKLG L  R+K+A  YN+KL +K+  HPQVRRIAR+RH+P+ VL  K+E + ++E+++RKE N R HSKPGSVP ++E++KHV++  E
Sbjct:  158 VFTGIDHHQREGTFVTCGQTVDIWDEQRSSPVLSFSWGVDSFSSVRYNPVEPDLLASCASDRSIVLYDTRESAPLRKVIMQLRSNTLCWNPMEAYYFTCANEDYNLYTYDIRNLDVPVTVHMDHVSAVLDVDYSPTGREFVSASFDKTIRIFPKDKGHSREVYHTKRMQHVICVKWSADSKFIMSGSDEMNIRLWKANASEKLGVLSTREKTAANYNKKLIQKFQHHPQVRRIARHRHLPRDVLKQKRELKEMKEARRRKEQNVRKHSKPGSVPLLTEKEKHVVKVVE 445

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. SwissProt
Match: gi|82237247|sp|Q6NVS5.1|DCA13_XENTR (RecName: Full=DDB1- and CUL4-associated factor 13; AltName: Full=WD repeat and SOF domain-containing protein 1)

HSP 1 Score: 363.614 bits (932), Expect = 8.178e-124
Identity = 156/284 (54.93%), Postives = 217/284 (76.41%), Query Frame = 0

Query:    1 MLTGISHQRNKPMFATCGEATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPLKERQKSALEYNEKLKEKYGSHPQVRRIARNRHVPKHVLNAKKEHQVIRESKKRKEANRRLHSKPGSVPYVSERDKHVI 284
            + TGI H  N  +FATCG+   +W+ +    ++ Y WGVDSI  I+FNP ETHIL +C +DRSI+LYD R+  P++K+++++++N + WNPME F+F  ANE++NLY +D+R +  P+ VHMDH +AV+ +DYSPTGKE VS ++DK+IRIF    G SREVYHTKRMQ +T V WS DNKY+L GSDEMNIR+WK+ A EKLG L  R+++A  YN+KLKEK+  HPQ++RIAR+RH+P+ + +  KE Q++RE++++K+ NRR HSKPGSVP  SE+ KHV+
Sbjct:  158 VFTGIDHHMNDAIFATCGQQVDIWDEQRSAPMRSYAWGVDSISSIKFNPIETHILSSCGTDRSIVLYDKRKPTPLKKIILEMRTNTLCWNPMEAFIFTAANENFNLYTYDMRYMDGPVKVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVQSGHSREVYHTKRMQHVTCVRWSADNKYVLCGSDEMNIRIWKANASEKLGLLSPRERAAQNYNQKLKEKFHHHPQIKRIARHRHLPRSIYSQIKEQQIMREARRKKDVNRRKHSKPGSVPIPSEKKKHVL 441

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. SwissProt
Match: gi|82241633|sp|Q7ZYQ6.1|DCA13_XENLA (RecName: Full=DDB1- and CUL4-associated factor 13; AltName: Full=WD repeat and SOF domain-containing protein 1)

HSP 1 Score: 363.229 bits (931), Expect = 1.159e-123
Identity = 155/284 (54.58%), Postives = 218/284 (76.76%), Query Frame = 0

Query:    1 MLTGISHQRNKPMFATCGEATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPLKERQKSALEYNEKLKEKYGSHPQVRRIARNRHVPKHVLNAKKEHQVIRESKKRKEANRRLHSKPGSVPYVSERDKHVI 284
            + TGI H     +FATCG+   +W+ +    ++ Y WGVDSI  ++FNP ETHIL +C +DRSI+LYD R+  P++K+++++++NA+ WNPME F+F  ANE++NLY +D+R +  P+ VHMDH +AV+ +DYSPTGKE+VS ++DK+IRIF    G SREVYHTKRMQ +T V WS DNKY+L GSDEMNIR+WK+ A EKLG L  R+++A  YN+KLKEK+  HPQ++RIAR+RH+P+ + +  KE Q++RE++++K+ NRR HSKPGSVP  SE+ KHV+
Sbjct:  158 VFTGIDHHVKDAVFATCGQQVDIWDEQRSAPMRSYAWGVDSISSVRFNPVETHILSSCGTDRSIVLYDKRKPTPLKKIILEMRTNALCWNPMEAFIFTAANENFNLYTYDMRYMDSPVKVHMDHVSAVLDVDYSPTGKELVSASFDKSIRIFPVQSGHSREVYHTKRMQHVTCVRWSADNKYVLCGSDEMNIRIWKANASEKLGVLSPRERAAQNYNQKLKEKFQHHPQIKRIARHRHLPRSIYSQIKEQQIMREARRKKDVNRRKHSKPGSVPIPSEKKKHVL 441

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. SwissProt
Match: gi|160358731|sp|Q9NV06.2|DCA13_HUMAN (RecName: Full=DDB1- and CUL4-associated factor 13; AltName: Full=WD repeat and SOF domain-containing protein 1)

HSP 1 Score: 352.058 bits (902), Expect = 3.268e-119
Identity = 152/278 (54.68%), Postives = 213/278 (76.62%), Query Frame = 0

Query:    1 MLTGISHQRNKPMFATCGEATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPLKERQKSALEYNEKLKEKYGSHPQVRRIARNRHVPKHVLNAKKEHQVIRESKKRKEANRRLHSKPGSVPYVSE 278
            + TGI H   + +FATCG+   +W+ +    +    WG DSI  ++FNP ET +LG+CASDR+I+LYD+R+  P++KV++D+++N + WNPME F+F  ANEDYNLY FD+R L  P++VHMDH +AV+ +DYSPTGKE VS ++DK+IRIF  D+ +SREVYHTKRMQ +  V W+ D+KYI+ GSDEMNIRLWK+ A EKLG L  R+K+A +YN+KLKEK+  +P ++RIAR+RH+PK + +  +E ++++E+++RKE NR  HSKPGSVP VSE
Sbjct:  158 VYTGIDHHWKEAVFATCGQQVDIWDEQRTNPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILDMRTNTICWNPMEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKLGVLTSREKAAKDYNQKLKEKFQHYPHIKRIARHRHLPKSIYSQIQEQRIMKEARRRKEVNRIKHSKPGSVPLVSE 435

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. SwissProt
Match: gi|75070449|sp|Q5R4T8.1|DCA13_PONAB (RecName: Full=DDB1- and CUL4-associated factor 13; AltName: Full=WD repeat and SOF domain-containing protein 1)

HSP 1 Score: 350.132 bits (897), Expect = 1.637e-118
Identity = 152/278 (54.68%), Postives = 212/278 (76.26%), Query Frame = 0

Query:    1 MLTGISHQRNKPMFATCGEATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPLKERQKSALEYNEKLKEKYGSHPQVRRIARNRHVPKHVLNAKKEHQVIRESKKRKEANRRLHSKPGSVPYVSE 278
            + TGI H   + +FATCG+   +W+ +    V    WG DSI  ++FNP ET +LG+CASDR+I+LYD+R+  P++KV++D+++N + WNPME F+F  ANEDYNLY FD+  L  P++VHMDH +AV+ +DYSPTGKE VS ++DK+IRIF  D+ +SREVYHTKRMQ +  V W+ D+KYI+ GSDEMNIRLWK+ A EKLG L  R+K+A +YN+KLKEK+  +P ++RIAR+RH+PK + +  +E ++++E+++RKE NR  HSKPGSVP VSE
Sbjct:  158 VYTGIDHHWKEAVFATCGQQVDIWDEQRTNPVCSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILDMRTNTICWNPMEAFIFTAANEDYNLYTFDMSALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKLGVLTSREKAAKDYNQKLKEKFQHYPHIKRIARHRHLPKSIYSQIQEQRIMKEARRRKEVNRIKHSKPGSVPIVSE 435

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. SwissProt
Match: gi|74676071|sp|O74340.1|DCA13_SCHPO (RecName: Full=Protein sof1; AltName: Full=U3 small nucleolar RNA-associated protein sof1; Short=U3 snoRNA-associated protein sof1)

HSP 1 Score: 291.582 bits (745), Expect = 1.268e-95
Identity = 135/290 (46.55%), Postives = 204/290 (70.34%), Query Frame = 0

Query:    2 LTGISHQRNKPMFATCGEATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPLKERQKSALEYNEKLKEKYGSHPQVRRIARNRHVPKHVLNAKKEHQVIRE---SKKRKEANRRLHSKPGSVPYVSERDKHVIEEQE 288
            L  I   +   +FAT GE  S+W+    T V +++WG D++  ++FN TET +L +   DRSI++YD+R  +P+ K++  L++N+++WNPME F F   +ED+NLY +D+RNL++ L V+ DH +AV+ +D+SPTG+E VSG+YDKTIRI+   EG SR+VYHTKRMQR+T+V +S D +YI SGSD+ N+RLW+++A  +      R+++ L+Y + L+E+Y   P++RRIAR+RH+P    N KK  ++ RE   S KR+E N R HSK G+VPY  ER++HV+  Q+
Sbjct:  150 LLDIDTSKGGDLFATSGENVSIWDYSRDTPVTKFEWGADTLPVVKFNYTETSVLASAGMDRSIVIYDLRTSSPLTKLITKLRTNSISWNPMEAFNFVAGSEDHNLYMYDMRNLKRALHVYKDHVSAVMSVDFSPTGQEFVSGSYDKTIRIYNVREGHSRDVYHTKRMQRVTAVKFSMDAQYIFSGSDDSNVRLWRARASSRASIRSTREENRLKYLDSLRERYKHIPEIRRIARHRHLPT---NVKKAAEIKREEINSLKRREENIRRHSKKGAVPYEKERERHVVGIQK 436

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. SwissProt
Match: gi|464777|sp|P33750.1|DCA13_YEAST (RecName: Full=Protein SOF1; AltName: Full=U3 small nucleolar RNA-associated protein SOF1; Short=U3 snoRNA-associated protein SOF1)

HSP 1 Score: 287.345 bits (734), Expect = 2.265e-93
Identity = 135/283 (47.70%), Postives = 193/283 (68.20%), Query Frame = 0

Query:    2 LTGISHQRNKPMFATCGEATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPLKERQKSALEYNEKLKEKYGSHPQVRRIARNRHVPKHVLNAKKEHQVIRESKKRKEANRRLHSKPGSVPYVSERDKHVI 284
              GI   R    FAT G    LW+      V +  WG D+I  ++FN  ET IL +  SD SI+LYD+R  +P +K+V  +++NA+ WNPME F F  ANED+N Y +D+RNL + L V  DH +AV+ +D+SPTG EIV+G+YDK+IRI++T+ G SRE+YHTKRMQ +  V +S D+KYI+SGSD+ N+RLW+SKAWE+      R+K+ LEY+EKLKE++   P+++RI+R+RHVP+ +  A++   +   S KR+EAN R   K   +PY+SER K ++
Sbjct:  182 FQGIDSHRENSTFATGGAKIHLWDVNRLKPVSDLSWGADNITSLKFNQNETDILASTGSDNSIVLYDLRTNSPTQKIVQTMRTNAICWNPMEAFNFVTANEDHNAYYYDMRNLSRSLNVFKDHVSAVMDVDFSPTGDEIVTGSYDKSIRIYKTNHGHSREIYHTKRMQHVFQVKYSMDSKYIISGSDDGNVRLWRSKAWERSNVKTTREKNKLEYDEKLKERFRHMPEIKRISRHRHVPQVIKKAQEIKNIELSSIKRREANERRTRK--DMPYISERKKQIV 462

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. SwissProt
Match: gi|75009953|sp|Q7KWL3.1|DCA13_DICDI (RecName: Full=DDB1- and CUL4-associated factor 13; AltName: Full=WD repeat and SOF domain-containing protein 1)

HSP 1 Score: 276.944 bits (707), Expect = 6.743e-90
Identity = 133/286 (46.50%), Postives = 191/286 (66.78%), Query Frame = 0

Query:    2 LTGISHQRNKPMFATCG-EATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPLKERQKSALEYNEKLKEKYGSHPQVRRIARNRHVPKHVLNAKKEHQVIRESKKRKEANRRLHSKPGSVPYVSE-RDKHVIE 285
             T I HQ N   FAT G  +  +W  +  T +Q  QWG  +I  ++FNP ETH+L +C +DR I+LYD+RE +P +K+   ++SN++AW P E F  A+ANED N+Y +DIRNL K + VH DH  +V+ +DYSPTG+EIVSG+YDKTIRIF  D  +SREVY+T RMQR+ SV ++ D+++ILSGSD+MNIR+WK+ +   LG L  R+K  LEY +K+KEK+   P+++ IA +R VP+ V   +     I ++K+R+  N  + +  G  P V +   KH I+
Sbjct:  159 FTSIDHQLNSTTFATSGPTSVEIWKHQRSTPIQTLQWGHSTITKVKFNPIETHLLASCTTDRDIILYDIRENSPAQKLTTSMRSNSIAWCPTESFTLAIANEDENVYQYDIRNLSKAMTVHRDHVGSVLDIDYSPTGREIVSGSYDKTIRIFPVDSYKSREVYYTNRMQRIFSVLFTADSRFILSGSDDMNIRVWKANSSAPLGILSNREKEKLEYQDKIKEKFKEIPELKTIATHRRVPQLVYKRRFIKNEIHKAKQRRVKN--ISNNSGKSPKVEKVLSKHTIK 442

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. nr
Match: gi|913313133|ref|XP_013187329.1| (PREDICTED: DDB1- and CUL4-associated factor 13 [Amyelois transitella])

HSP 1 Score: 414.846 bits (1065), Expect = 2.272e-141
Identity = 182/288 (63.19%), Postives = 241/288 (83.68%), Query Frame = 0

Query:    1 MLTGISHQRNKPMFATCGEATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPLKERQKSALEYNEKLKEKYGSHPQVRRIARNRHVPKHVLNAKKEHQVIRESKKRKEANRRLHSKPGSVPYVSERDKHVIEEQE 288
            +++G+SH R+KP+FATCGE   LW       ++ ++WGVDS+H + FN  E ++L +CASDRSI+LYD RE  P+RKVVM+L+SN++AWNPME F+F+VANEDYNLY FD+R L++P+ +HM HT+AVI +DY+PTG+E+VSG+YDKTIRIF++ +G SR+VYHTKRMQRLT V W+ DNKYILSGSDEMNIR+WK++A EKLG LK R+++AL Y+E LKEK+ +HPQ+RRIAR+RHVPKHV NA+KE + I+E  KRK+ANRR HSKPG+VP+V ER KH+++E E
Sbjct:  160 VVSGVSHHRSKPIFATCGEHCQLWEKTRNEPIKVFKWGVDSLHHVAFNQVENNLLASCASDRSIILYDCRESGPLRKVVMELRSNSLAWNPMEAFIFSVANEDYNLYTFDVRKLKQPVNIHMGHTSAVIDVDYAPTGRELVSGSYDKTIRIFESLKGNSRDVYHTKRMQRLTCVKWTLDNKYILSGSDEMNIRMWKARASEKLGVLKPRERTALNYSEALKEKFANHPQIRRIARHRHVPKHVYNAQKELKTIKEKTKRKDANRRAHSKPGAVPFVPERQKHIVKEDE 447

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. nr
Match: gi|1228393570|ref|XP_021955511.1| (DDB1- and CUL4-associated factor 13-like [Folsomia candida] >gi|1215265826|gb|OXA52141.1| hypothetical protein Fcan01_13395 [Folsomia candida])

HSP 1 Score: 414.461 bits (1064), Expect = 2.710e-141
Identity = 183/288 (63.54%), Postives = 237/288 (82.29%), Query Frame = 0

Query:    1 MLTGISHQRNKPMFATCGEATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPLKERQKSALEYNEKLKEKYGSHPQVRRIARNRHVPKHVLNAKKEHQVIRESKKRKEANRRLHSKPGSVPYVSERDKHVIEEQE 288
            ++ G+SH   KP+FATCG++  LW  E    + +Y WGVD++  I+FNPT+T++LGACA+DRSI+LYD+R  +P+RK V+ L+SNA+AWNPMEPFVF VANEDYN Y FD+R L+KPL + MDH +AVI +D+SPTGKEIV+G+YDKTIRIF+ ++G+SREVYHTKRMQRLTSV W+ DNKYI+SGSDEMNIRLWK++AWEKLG ++ R++ A+ YNE LKEK+   PQV+RI+R+R VPKHV  AKKE   I++SKKRKE NRR H+KPG+VP+V ER K ++ EQE
Sbjct:  163 VVAGVSHHAKKPLFATCGDSCLLWEGERNEPIHKYDWGVDTLSAIKFNPTQTNVLGACANDRSIILYDIRGGSPIRKAVLGLRSNAIAWNPMEPFVFVVANEDYNSYMFDMRRLKKPLNIFMDHVSAVIDVDFSPTGKEIVTGSYDKTIRIFEVEKGRSREVYHTKRMQRLTSVLWTMDNKYIISGSDEMNIRLWKARAWEKLGVMRTRERDAMNYNEALKEKFAHFPQVKRISRHRQVPKHVYQAKKELVTIKDSKKRKEGNRRAHTKPGTVPFVPERQKTILSEQE 450

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. nr
Match: gi|91076846|ref|XP_974788.1| (PREDICTED: DDB1- and CUL4-associated factor 13 isoform X2 [Tribolium castaneum] >gi|270001818|gb|EEZ98265.1| POC1 centriolar protein homolog-like Protein [Tribolium castaneum])

HSP 1 Score: 414.461 bits (1064), Expect = 2.763e-141
Identity = 183/288 (63.54%), Postives = 233/288 (80.90%), Query Frame = 0

Query:    1 MLTGISHQRNKPMFATCGEATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPLKERQKSALEYNEKLKEKYGSHPQVRRIARNRHVPKHVLNAKKEHQVIRESKKRKEANRRLHSKPGSVPYVSERDKHVIEEQE 288
            +LTGI+H  + P+FATCGE   +W       V+ ++WG+DS+HDI FNP ET+IL +CASDRSI+LYD R+  P+RKVVM L++N ++WNPME F+F  ANEDYNLY FD RNL++P+ +HMDH  AV  +DY+PTG+E VSG+YDKT+RIF+T +G SRE+YHTKRMQRLT V W+ DNKYILSGSDEMNIR+WK++A EKLGPLK R+++AL Y+E LKEKY +HP+VRRIAR+RHVPKH+ NA+ E + I+E  KRKEANRR HSKPG VPY  ER KHV++E +
Sbjct:  158 VLTGITHHISDPVFATCGEICQIWEETRNEPVKTFEWGIDSLHDIAFNPIETNILASCASDRSIILYDTRDSAPLRKVVMKLRTNKISWNPMEAFIFTGANEDYNLYTFDTRNLKQPVNIHMDHVGAVTSIDYAPTGREFVSGSYDKTVRIFETSKGHSREIYHTKRMQRLTCVQWTLDNKYILSGSDEMNIRIWKARASEKLGPLKPRERAALNYSEALKEKYATHPKVRRIARHRHVPKHIYNAQNELRTIKEKGKRKEANRRAHSKPGEVPYEPERKKHVLKEDK 445

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. nr
Match: gi|817201835|ref|XP_012276679.1| (DDB1- and CUL4-associated factor 13 [Orussus abietinus])

HSP 1 Score: 414.461 bits (1064), Expect = 2.980e-141
Identity = 186/288 (64.58%), Postives = 233/288 (80.90%), Query Frame = 0

Query:    1 MLTGISHQRNKPMFATCGEATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPLKERQKSALEYNEKLKEKYGSHPQVRRIARNRHVPKHVLNAKKEHQVIRESKKRKEANRRLHSKPGSVPYVSERDKHVIEEQE 288
            +L+GISH R KPMFATCGE   LW       ++ +QWGVDS+HD++FN  ++++L ACASDR I+LYD+RE  P+RKV+M L++N ++WNPME + F  ANEDYNLY FD R +R P+ VHMDH AAV  +DY+PTGKE VSG+YDK+IRIF+  +G SR++YHTKRMQRLTSVAWS DNKYILSGSDEMNIR+WK++A EKLG L+ R+K+AL Y+E LKEK+ SHPQV+RIAR+R VPKH+ NAK E + IRE  KRKEANRR HSK GSVP+VSER KH+I E++
Sbjct:  157 VLSGISHHRKKPMFATCGEICQLWEETRNEPIRTFQWGVDSLHDVKFNLVQSNLLAACASDRGIILYDIRETGPLRKVIMKLRTNKLSWNPMEAYTFTCANEDYNLYTFDTRKIRTPVNVHMDHVAAVTDVDYAPTGKEFVSGSYDKSIRIFEVYKGHSRDIYHTKRMQRLTSVAWSLDNKYILSGSDEMNIRVWKARAAEKLGVLRPREKAALNYSEALKEKFASHPQVKRIARHRQVPKHIYNAKSELRTIREKSKRKEANRRAHSKKGSVPFVSERKKHLIAEKQ 444

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. nr
Match: gi|1199376018|ref|XP_021182281.1| (DDB1- and CUL4-associated factor 13 [Helicoverpa armigera])

HSP 1 Score: 414.075 bits (1063), Expect = 4.721e-141
Identity = 181/288 (62.85%), Postives = 239/288 (82.99%), Query Frame = 0

Query:    1 MLTGISHQRNKPMFATCGEATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPLKERQKSALEYNEKLKEKYGSHPQVRRIARNRHVPKHVLNAKKEHQVIRESKKRKEANRRLHSKPGSVPYVSERDKHVIEEQE 288
            ++TG++H RNKP+FATCGE   LW +     V+ ++WGVDS+H + FN  E ++L +CASDRS++LYD RE  P+RKVVM+L+SNA++WNPME F+F VANEDYNLY FD+R L++P+ +HM HT+AVI +DY+PTG+E V+G+YDKT+RIF++ +G SR+VYHTKRMQRLT V W+ DNKYILSGSDEMNIR+WK++A EKLG LK R+++AL Y+E LKEK+ +HPQV+RIAR+RHVPKH+LNA+ E + I+E  KRKE NRR HSKPGSVP+V ER KH+++E E
Sbjct:  160 VVTGVTHHRNKPLFATCGEHCQLWENTRNEPVKVFKWGVDSLHHVSFNQVEHNLLASCASDRSVILYDCRESGPLRKVVMELRSNALSWNPMEAFIFTVANEDYNLYTFDVRKLKQPVNIHMGHTSAVIDVDYAPTGREFVAGSYDKTVRIFESLKGNSRDVYHTKRMQRLTCVKWTLDNKYILSGSDEMNIRMWKARASEKLGVLKPRERTALNYSESLKEKFANHPQVKRIARHRHVPKHILNAQNELRTIKEKVKRKEGNRRAHSKPGSVPFVPERQKHIVKEDE 447

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. nr
Match: gi|943962017|ref|XP_014363436.1| (PREDICTED: DDB1- and CUL4-associated factor 13 [Papilio machaon] >gi|930670385|gb|KPJ11201.1| DDB1- and CUL4-associated factor 13 [Papilio machaon])

HSP 1 Score: 413.305 bits (1061), Expect = 8.328e-141
Identity = 180/288 (62.50%), Postives = 240/288 (83.33%), Query Frame = 0

Query:    1 MLTGISHQRNKPMFATCGEATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPLKERQKSALEYNEKLKEKYGSHPQVRRIARNRHVPKHVLNAKKEHQVIRESKKRKEANRRLHSKPGSVPYVSERDKHVIEEQE 288
            +++GI+H RNKP+FATCGE   LW +     ++ ++WGVDS+H + FN  E ++L +CASDRSI+LYD RE  P+RKVVM+L+SNA++WNPME F+F VANEDYNLY FD+R L +P+ +HMDHT+AVI +DYSPTG+E V+G+YDKT+RIF++ +G SR+VYHTKRMQRLT V WS DNKYIL+GSDEMNIR+WK++A EKLG LK R+++AL Y + LKEK+ +HPQ++RIAR+RHVPKH++NA+KE + IRE  K+KEANRR HSKPG+VP+V ER KH+++E +
Sbjct:  160 VVSGITHHRNKPIFATCGEHCQLWENTRNEPIKVFKWGVDSLHHVAFNQVEYNLLASCASDRSIILYDCRESGPLRKVVMELRSNALSWNPMEAFIFTVANEDYNLYTFDVRKLNQPINIHMDHTSAVIDVDYSPTGREFVAGSYDKTVRIFESLKGHSRDVYHTKRMQRLTCVKWSLDNKYILTGSDEMNIRMWKARASEKLGVLKPRERTALNYADALKEKFANHPQIKRIARHRHVPKHIMNAQKELKTIREKSKKKEANRRAHSKPGTVPHVPERKKHIVKEDQ 447

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. nr
Match: gi|675379140|gb|KFM72042.1| (DDB1- and CUL4-associated factor 13, partial [Stegodyphus mimosarum])

HSP 1 Score: 411.379 bits (1056), Expect = 3.824e-140
Identity = 186/285 (65.26%), Postives = 234/285 (82.11%), Query Frame = 0

Query:    1 MLTGISHQRNKPMFATCGEATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPLKERQKSALEYNEKLKEKYGSHPQVRRIARNRHVPKHVLNAKKEHQVIRESKKRKEANRRLHSKPGSVPYVSERDKHVIE 285
            +LTGISH R +P++ATCGE T +W S     ++   WGVD++  I+FNP ET ILG+  SDRSI+LYDVRE  P+RKVV+++ SNA++WNPME FVF  A+EDYNLY+FD+R L  P  +H DHT+AV+ +DYSPTGKE VSG+YDK++RIF  + G+SR+VYHTKRMQRLTSV W+ DNKYIL+GSDEMNIR+WK+KA EKLG L  R++ AL ++EKLKEK+  HPQ++RIAR+RHVPKH+ NA KEH+ IRESKKRKEANRR HSKPG+VPYVSER KH+I+
Sbjct:  155 VLTGISHHRKEPLYATCGEKTQIWESTRSEPLRSLSWGVDTVKSIRFNPVETSILGSTCSDRSIILYDVREACPLRKVVLEMCSNAISWNPMEAFVFVCASEDYNLYSFDMRKLTLPFQIHKDHTSAVLDVDYSPTGKEFVSGSYDKSVRIFPVNSGRSRDVYHTKRMQRLTSVLWTLDNKYILTGSDEMNIRMWKAKASEKLGALSYRERMALNHSEKLKEKFAQHPQIQRIARHRHVPKHIYNAAKEHRTIRESKKRKEANRRAHSKPGTVPYVSERVKHIIK 439

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. nr
Match: gi|1247043018|gb|PCG77646.1| (hypothetical protein B5V51_6726 [Heliothis virescens])

HSP 1 Score: 410.609 bits (1054), Expect = 9.394e-140
Identity = 179/288 (62.15%), Postives = 238/288 (82.64%), Query Frame = 0

Query:    1 MLTGISHQRNKPMFATCGEATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPLKERQKSALEYNEKLKEKYGSHPQVRRIARNRHVPKHVLNAKKEHQVIRESKKRKEANRRLHSKPGSVPYVSERDKHVIEEQE 288
            ++TG++H RNKP+FATCGE   LW +     V+ ++WGVDS+H + FN  E ++L +CASDRS++LYD RE  P+RKVVM+L+SNA++WNPME F+F VANEDYNLY FD+R L++P+ +HM HT+AVI +DY+PTG+E V+G+YDKT+RIF++ +G SR+VYHTKRMQRLT V W+ DNKYILSGSDEMNIR+WK++A EKLG LK R+++AL Y + LKEK+ +HPQV+RIAR+RHVPKH+LNA+ E + I++  KRKE NRR HSKPGSVP+V ER KH+++E E
Sbjct:  160 VVTGVTHHRNKPIFATCGEHCQLWENTRNEPVKIFKWGVDSLHHVSFNQVEHNLLASCASDRSVILYDCRESGPLRKVVMELRSNALSWNPMEAFIFTVANEDYNLYTFDVRKLKQPVNIHMGHTSAVIDVDYAPTGREFVAGSYDKTVRIFESLKGNSRDVYHTKRMQRLTCVKWTLDNKYILSGSDEMNIRMWKARASEKLGVLKPRERTALNYADSLKEKFANHPQVKRIARHRHVPKHILNAQNELRTIKDKAKRKEGNRRAHSKPGSVPFVPERQKHIVKEDE 447

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. nr
Match: gi|1080040549|ref|XP_018561237.1| (DDB1- and CUL4-associated factor 13 [Anoplophora glabripennis])

HSP 1 Score: 409.453 bits (1051), Expect = 2.920e-139
Identity = 181/288 (62.85%), Postives = 236/288 (81.94%), Query Frame = 0

Query:    1 MLTGISHQRNKPMFATCGEATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPLKERQKSALEYNEKLKEKYGSHPQVRRIARNRHVPKHVLNAKKEHQVIRESKKRKEANRRLHSKPGSVPYVSERDKHVIEEQE 288
            +LTGISH R KP+FAT GE   +W       ++  +WGV S+HDI FNP E++IL ACASDRSI+LYD+RE  P+RKV+M+LK+N ++WNPME ++F  ANEDYNLY FD RNL++P+ +H DH  AV  +DYSPTGKE VSG+YDK+IRIF+ D+G SRE+YHTKRMQR+T V WS DNKYI+SGSDEMNIR+WK++A EKLGPLK R+K+AL Y+E LKEK+ SHPQ++RI+R+RHVPKH+ NA++E ++++E  KRKEANRR HSKPG VP+V ER K++++EQ+
Sbjct:  158 VLTGISHHRKKPIFATSGEVCQIWEESRNEPIRTIEWGVYSLHDIVFNPVESNILAACASDRSIILYDMRENKPLRKVIMNLKTNKLSWNPMEAYIFTCANEDYNLYTFDSRNLKQPVNLHRDHVGAVTFVDYSPTGKEFVSGSYDKSIRIFEMDKGHSREIYHTKRMQRVTCVHWSLDNKYIMSGSDEMNIRIWKARASEKLGPLKPREKAALRYSETLKEKFASHPQIKRISRHRHVPKHIYNAQRELRIVKEKVKRKEANRRAHSKPGEVPFVPERHKNILKEQK 445

[Close]

BLAST of wd repeat and sof domain-containing protein 1 vs. nr
Match: gi|1274140066|ref|XP_022814791.1| (DDB1- and CUL4-associated factor 13 [Spodoptera litura])

HSP 1 Score: 408.683 bits (1049), Expect = 4.829e-139
Identity = 177/288 (61.46%), Postives = 238/288 (82.64%), Query Frame = 0

Query:    1 MLTGISHQRNKPMFATCGEATSLWNSEMQTIVQEYQWGVDSIHDIQFNPTETHILGACASDRSILLYDVRERNPMRKVVMDLKSNAMAWNPMEPFVFAVANEDYNLYAFDIRNLRKPLLVHMDHTAAVICLDYSPTGKEIVSGAYDKTIRIFQTDEGQSREVYHTKRMQRLTSVAWSKDNKYILSGSDEMNIRLWKSKAWEKLGPLKERQKSALEYNEKLKEKYGSHPQVRRIARNRHVPKHVLNAKKEHQVIRESKKRKEANRRLHSKPGSVPYVSERDKHVIEEQE 288
            ++TG++H R+KP+FATCGE   LW +     V+ ++WGVDS+H + FN  E ++L +CASDRS++LYD RE  P+RKVVM+L+SNA++WNPME F+F VANEDYNLY FD+R L++P+ VHM HT+AVI +DY+PTG+E V+G+YDKT+RIF++ +G SR+VYHTKRMQRLT V W+ DNKYILSGSDEMNIR+WK++A EKLG LK R+++AL Y + LKEK+ +HPQV+RIAR+RHVPKH+LNA+ E + I++  KRKE NRR HSKPG++P+V ER KH+++E E
Sbjct:  160 VVTGVTHHRSKPIFATCGEHCQLWENTRNEPVKVFKWGVDSLHHVSFNQVEQNLLASCASDRSVILYDCRESGPLRKVVMELRSNALSWNPMEAFIFTVANEDYNLYTFDVRKLKQPINVHMGHTSAVIDVDYAPTGREFVAGSYDKTVRIFESLKGNSRDVYHTKRMQRLTCVKWTLDNKYILSGSDEMNIRMWKARASEKLGVLKPRERTALNYADSLKEKFANHPQVKRIARHRHVPKHILNAQNEIRTIKQKAKRKEGNRRAHSKPGAIPFVPERQKHIVKEDE 447

The following BLAST results are available for this feature:

BLAST of wd repeat and sof domain-containing protein 1 vs. L. salmonis genes
BLAST of wd repeat and sof domain-containing protein 1 vs. SwissProt
BLAST of wd repeat and sof domain-containing protein 1 vs. nr

BLAST of wd repeat and sof domain-containing protein 1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 11


Match Name	E-value	Identity	Description
EMLSAG00000004181	1.362e-142	66.32	supercontig:LSalAtl2s:LSalAtl2s220:848:70420:-1 ge...	[more]
EMLSAG00000011858	3.330e-13	27.61	supercontig:LSalAtl2s:LSalAtl2s832:38825:40850:-1 ...	[more]
EMLSAG00000009105	1.350e-8	21.69	supercontig:LSalAtl2s:LSalAtl2s573:267932:269786:1...	[more]
EMLSAG00000006041	2.085e-8	27.27	supercontig:LSalAtl2s:LSalAtl2s327:367648:370815:1...	[more]
EMLSAG00000005728	5.316e-8	24.58	supercontig:LSalAtl2s:LSalAtl2s309:717547:718847:-...	[more]
EMLSAG00000002001	2.106e-7	32.77	supercontig:LSalAtl2s:LSalAtl2s135:125525:127362:1...	[more]
EMLSAG00000001111	5.773e-7	27.38	supercontig:LSalAtl2s:LSalAtl2s1186:117586:119588:...	[more]
EMLSAG00000004683	7.012e-7	21.93	supercontig:LSalAtl2s:LSalAtl2s245:245484:249637:1...	[more]
EMLSAG00000009719	7.544e-7	24.27	supercontig:LSalAtl2s:LSalAtl2s627:20682:23106:-1 ...	[more]
EMLSAG00000002459	8.022e-7	20.11	supercontig:LSalAtl2s:LSalAtl2s1472:24513:26207:-1...	[more]

Pages

BLAST of wd repeat and sof domain-containing protein 1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|82233900\|sp\|Q5ZLK1.1\|DCA13_CHICK	3.336e-126	56.03	RecName: Full=DDB1- and CUL4-associated factor 13;...	[more]
gi\|341940425\|sp\|Q6PAC3.2\|DCA13_MOUSE	6.532e-125	56.69	RecName: Full=DDB1- and CUL4-associated factor 13;...	[more]
gi\|82241891\|sp\|Q803X4.1\|DCA13_DANRE	7.661e-124	56.25	RecName: Full=DDB1- and CUL4-associated factor 13;...	[more]
gi\|82237247\|sp\|Q6NVS5.1\|DCA13_XENTR	8.178e-124	54.93	RecName: Full=DDB1- and CUL4-associated factor 13;...	[more]
gi\|82241633\|sp\|Q7ZYQ6.1\|DCA13_XENLA	1.159e-123	54.58	RecName: Full=DDB1- and CUL4-associated factor 13;...	[more]
gi\|160358731\|sp\|Q9NV06.2\|DCA13_HUMAN	3.268e-119	54.68	RecName: Full=DDB1- and CUL4-associated factor 13;...	[more]
gi\|75070449\|sp\|Q5R4T8.1\|DCA13_PONAB	1.637e-118	54.68	RecName: Full=DDB1- and CUL4-associated factor 13;...	[more]
gi\|74676071\|sp\|O74340.1\|DCA13_SCHPO	1.268e-95	46.55	RecName: Full=Protein sof1; AltName: Full=U3 small...	[more]
gi\|464777\|sp\|P33750.1\|DCA13_YEAST	2.265e-93	47.70	RecName: Full=Protein SOF1; AltName: Full=U3 small...	[more]
gi\|75009953\|sp\|Q7KWL3.1\|DCA13_DICDI	6.743e-90	46.50	RecName: Full=DDB1- and CUL4-associated factor 13;...	[more]

Pages

BLAST of wd repeat and sof domain-containing protein 1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|913313133\|ref\|XP_013187329.1\|	2.272e-141	63.19	PREDICTED: DDB1- and CUL4-associated factor 13 [Am...	[more]
gi\|1228393570\|ref\|XP_021955511.1\|	2.710e-141	63.54	DDB1- and CUL4-associated factor 13-like [Folsomia...	[more]
gi\|91076846\|ref\|XP_974788.1\|	2.763e-141	63.54	PREDICTED: DDB1- and CUL4-associated factor 13 iso...	[more]
gi\|817201835\|ref\|XP_012276679.1\|	2.980e-141	64.58	DDB1- and CUL4-associated factor 13 [Orussus abiet...	[more]
gi\|1199376018\|ref\|XP_021182281.1\|	4.721e-141	62.85	DDB1- and CUL4-associated factor 13 [Helicoverpa a...	[more]
gi\|943962017\|ref\|XP_014363436.1\|	8.328e-141	62.50	PREDICTED: DDB1- and CUL4-associated factor 13 [Pa...	[more]
gi\|675379140\|gb\|KFM72042.1\|	3.824e-140	65.26	DDB1- and CUL4-associated factor 13, partial [Steg...	[more]
gi\|1247043018\|gb\|PCG77646.1\|	9.394e-140	62.15	hypothetical protein B5V51_6726 [Heliothis viresce...	[more]
gi\|1080040549\|ref\|XP_018561237.1\|	2.920e-139	62.85	DDB1- and CUL4-associated factor 13 [Anoplophora g...	[more]
gi\|1274140066\|ref\|XP_022814791.1\|	4.829e-139	61.46	DDB1- and CUL4-associated factor 13 [Spodoptera li...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold25_size650667	supercontig	scaffold25_size650667:95067..95933 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold25_size650667-processed-gene-1.1-mRNA-1	snap_masked-scaffold25_size650667-processed-gene-1.1-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold25_size650667:95067..95933+

gene from alignment at scaffold25_size650667:95067..95933+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold25_size650667-processed-gene-1.1 ID=snap_masked-scaffold25_size650667-processed-gene-1.1|Name=wd repeat and sof domain-containing protein 1|organism=Tigriopus kingsejongensis|type=gene|length=867bp|location=Sequence derived from alignment at scaffold25_size650667:95067..95933+ (Tigriopus kingsejongensis)
ATGCTCACGGGGATATCGCATCAACGGAATAAGCCCATGTTCGCCACGTG
TGGCGAAGCCACGTCGCTGTGGAACTCCGAGATGCAGACCATCGTGCAGG
AGTACCAGTGGGGCGTGGACTCGATCCACGACATCCAGTTCAACCCCACT
GAAACGCACATCTTGGGTGCGTGCGCCTCCGACCGCTCCATCCTGCTCTA
CGACGTGCGCGAGCGTAATCCTATGCGCAAGGTGGTCATGGATCTCAAGT
CCAACGCGATGGCCTGGAATCCCATGGAGCCTTTCGTGTTCGCCGTGGCC
AACGAGGACTACAACTTGTACGCCTTCGACATCCGAAACCTCCGCAAGCC
GCTCCTCGTCCACATGGACCACACGGCGGCCGTCATCTGCCTGGACTATT
CGCCCACGGGCAAGGAAATCGTCTCGGGCGCCTACGACAAGACCATTCGC
ATCTTCCAGACCGATGAAGGTCAATCCCGGGAAGTCTACCACACCAAGCG
CATGCAGCGGCTCACCTCGGTGGCCTGGAGCAAAGACAACAAGTACATTC
TGTCCGGCTCGGATGAGATGAACATCCGCCTCTGGAAGTCCAAGGCCTGG
GAGAAGTTGGGCCCGCTCAAAGAGCGACAGAAATCCGCCCTCGAGTACAA
CGAGAAGCTCAAAGAGAAGTACGGATCCCATCCCCAGGTGCGGCGCATTG
CCAGAAATCGACACGTGCCCAAGCATGTCCTCAACGCCAAGAAGGAGCAC
CAGGTCATCAGGGAGTCCAAGAAGCGGAAGGAGGCCAACCGGCGACTCCA
TTCCAAGCCTGGATCCGTGCCCTATGTGTCTGAACGCGATAAACATGTCA
TTGAGGAGCAAGAATAG

Synonyms

The feature 'wd repeat and sof domain-containing protein 1' has the following synonyms


Synonym
Tk06685

Add to Basket

Pages

Pages

Pages

Search form